MS019627 (gene) Bitter gourd (TR) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.GTTTGCTTGGCGTGTCTATTGCCTCTGTTTCTCATTCCAGTCGTCAACGCCCTGCCGGTTCTGTTCTACTTAATTATGGTATGCCAACGTGATTTCTCTCTCTATCTCTTAAAGATTTCGAGTTTTCTGTGCTATTGAATGGAATTTCGTTAATAATCGTCCCAATTCGCTGTTTTCGCCCCCCTTTTCTTTTGTGTTTCTTGAATTTTCTTTCAGGGAAAAATTTATGGACTTTTTGGCTGGGAGTATAGAAAACCGGAAAGGGTACCACCGGCTTGTCCCTATCGCCCTGCTGCAAAACAAAATGGAAATGTG GTTTGCTTGGCGTGTCTATTGCCTCTGTTTCTCATTCCAGTCGTCAACGCCCTGCCGGTTCTGTTCTACTTAATTATGGGAAAAATTTATGGACTTTTTGGCTGGGAGTATAGAAAACCGGAAAGGGTACCACCGGCTTGTCCCTATCGCCCTGCTGCAAAACAAAATGGAAATGTG GTTTGCTTGGCGTGTCTATTGCCTCTGTTTCTCATTCCAGTCGTCAACGCCCTGCCGGTTCTGTTCTACTTAATTATGGGAAAAATTTATGGACTTTTTGGCTGGGAGTATAGAAAACCGGAAAGGGTACCACCGGCTTGTCCCTATCGCCCTGCTGCAAAACAAAATGGAAATGTG VCLACLLPLFLIPVVNALPVLFYLIMGKIYGLFGWEYRKPERVPPACPYRPAAKQNGNV Homology
BLAST of MS019627 vs. NCBI nr
Match: XP_022144783.1 (uncharacterized protein LOC111014385 [Momordica charantia]) HSP 1 Score: 124.0 bits (310), Expect = 4.3e-25 Identity = 59/59 (100.00%), Postives = 59/59 (100.00%), Query Frame = 0
BLAST of MS019627 vs. NCBI nr
Match: XP_038903023.1 (uncharacterized protein LOC120089725 [Benincasa hispida]) HSP 1 Score: 119.8 bits (299), Expect = 8.0e-24 Identity = 56/59 (94.92%), Postives = 58/59 (98.31%), Query Frame = 0
BLAST of MS019627 vs. NCBI nr
Match: XP_008442719.1 (PREDICTED: uncharacterized protein LOC103486509 [Cucumis melo] >XP_011651967.1 uncharacterized protein LOC105434961 [Cucumis sativus] >KGN58993.1 hypothetical protein Csa_002586 [Cucumis sativus]) HSP 1 Score: 117.5 bits (293), Expect = 4.0e-23 Identity = 56/59 (94.92%), Postives = 57/59 (96.61%), Query Frame = 0
BLAST of MS019627 vs. NCBI nr
Match: XP_022935585.1 (uncharacterized protein LOC111442415 isoform X2 [Cucurbita moschata] >XP_022935586.1 uncharacterized protein LOC111442415 isoform X2 [Cucurbita moschata]) HSP 1 Score: 115.9 bits (289), Expect = 1.2e-22 Identity = 55/59 (93.22%), Postives = 57/59 (96.61%), Query Frame = 0
BLAST of MS019627 vs. NCBI nr
Match: XP_022983172.1 (uncharacterized protein LOC111481805 [Cucurbita maxima]) HSP 1 Score: 115.9 bits (289), Expect = 1.2e-22 Identity = 55/59 (93.22%), Postives = 57/59 (96.61%), Query Frame = 0
BLAST of MS019627 vs. ExPASy TrEMBL
Match: A0A6J1CU80 (uncharacterized protein LOC111014385 OS=Momordica charantia OX=3673 GN=LOC111014385 PE=4 SV=1) HSP 1 Score: 124.0 bits (310), Expect = 2.1e-25 Identity = 59/59 (100.00%), Postives = 59/59 (100.00%), Query Frame = 0
BLAST of MS019627 vs. ExPASy TrEMBL
Match: A0A0A0LB44 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G741830 PE=4 SV=1) HSP 1 Score: 117.5 bits (293), Expect = 1.9e-23 Identity = 56/59 (94.92%), Postives = 57/59 (96.61%), Query Frame = 0
BLAST of MS019627 vs. ExPASy TrEMBL
Match: A0A1S3B744 (uncharacterized protein LOC103486509 OS=Cucumis melo OX=3656 GN=LOC103486509 PE=4 SV=1) HSP 1 Score: 117.5 bits (293), Expect = 1.9e-23 Identity = 56/59 (94.92%), Postives = 57/59 (96.61%), Query Frame = 0
BLAST of MS019627 vs. ExPASy TrEMBL
Match: A0A6J1F536 (uncharacterized protein LOC111442415 isoform X2 OS=Cucurbita moschata OX=3662 GN=LOC111442415 PE=4 SV=1) HSP 1 Score: 115.9 bits (289), Expect = 5.6e-23 Identity = 55/59 (93.22%), Postives = 57/59 (96.61%), Query Frame = 0
BLAST of MS019627 vs. ExPASy TrEMBL
Match: A0A6J1IYJ1 (uncharacterized protein LOC111481805 OS=Cucurbita maxima OX=3661 GN=LOC111481805 PE=4 SV=1) HSP 1 Score: 115.9 bits (289), Expect = 5.6e-23 Identity = 55/59 (93.22%), Postives = 57/59 (96.61%), Query Frame = 0
BLAST of MS019627 vs. TAIR 10
Match: AT5G03460.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). ) HSP 1 Score: 75.1 bits (183), Expect = 2.1e-14 Identity = 31/56 (55.36%), Postives = 42/56 (75.00%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Bitter gourd (TR) v1
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
|