MS019622 (gene) Bitter gourd (TR) v1

Overview
NameMS019622
Typegene
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
Descriptiontranscription factor MYB27-like
Locationscaffold729: 1071245 .. 1072357 (-)
RNA-Seq ExpressionMS019622
SyntenyMS019622
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGCCAATCAATCAGCTCTTCAAAGTGAGACACTGCGCAGAGGACCTTGGCTTGAAGAGGAAGACAAGCAGCTCACCACGTTTGTAACTCGCATGGGGGAGAGGAAATGGGACTCGATCGCCAAAGCTTCTGGTATGACTTCTAACCCCAAACGAATCGCAAGTTTCCATTTTCAAACTTAGTAGTATGATATTGTCCACTCTGAACAAAATTTGTATCGGGAGATGTTGAGAATCTCCCCCTTTTTCACAGGCCTATGTTCATATACCCAACACTAAAAACAGTAGATTTACTATCACTCATGTCTTTTAGTTCATAAATATAGAACAATGTACTTAGAAAAAATTGTTCTTTTTTTTTCAGGACTTGAGAGAACTGGGAAGAGCTGCAGATTCAGATGGCTCAACTATCTCCGCCCCAATCTTAAGCACGGTTGTATGAGTTCTGAGGAAGAAGAAGTCATTCTGAAACTTCATAAAAAATGGGGAAACAAGTAAGGATTAAATCTCTCGTTATTAACATCCGGGTGCTGCAAATTTTGTAACTTTATTGCTCTGTCAGCATCATAATCATCCAATACATCTTCTCCTAGATGGTCAAGAATTGCGCGGTGGCTTCCGGGAAGAACCGATAACGAGATCAAGAACTACTGGAGAAACCATATGAGGAAAAAGCTCCCCATACAACAAGAAGGTTTGATATCTCAATCACATAATCAGCTTCGGATTGATTGATTTGTTGAAGTTTCTTCAATTTCTTGTGCAGAGAGCAAAGTAAAACATGGGAAACAGGACAAACTCTCATTCAAGCAATGTGCTATGGGGGGAAGTCCAAGGCAAGACCATAATGAGAGAAAGGACATTCCCTTGAGCAACGTTTCTCACAACCTTTTCGGGTTTCCGAACTTCGAGATCACGAGTTCGCCATATGAAATTCGACTATCGAACTGGATTTTGGATCATTTGTCGAACGAGAAGTTGGAAGTGAATCATTATGAAGATCAATACAATAGTTTAGAGTTCTGTTTCTGTCATCCCAATATGAACTGTGCAGTGAGAGATGATCAAACAGATCATTTATGGGATTCCCTAGCTTCCCTTTGGGATATGGAG

mRNA sequence

ATGGCCAATCAATCAGCTCTTCAAAGTGAGACACTGCGCAGAGGACCTTGGCTTGAAGAGGAAGACAAGCAGCTCACCACGTTTGTAACTCGCATGGGGGAGAGGAAATGGGACTCGATCGCCAAAGCTTCTGGACTTGAGAGAACTGGGAAGAGCTGCAGATTCAGATGGCTCAACTATCTCCGCCCCAATCTTAAGCACGGTTGTATGAGTTCTGAGGAAGAAGAAGTCATTCTGAAACTTCATAAAAAATGGGGAAACAAATGGTCAAGAATTGCGCGGTGGCTTCCGGGAAGAACCGATAACGAGATCAAGAACTACTGGAGAAACCATATGAGGAAAAAGCTCCCCATACAACAAGAAGAGAGCAAAGTAAAACATGGGAAACAGGACAAACTCTCATTCAAGCAATGTGCTATGGGGGGAAGTCCAAGGCAAGACCATAATGAGAGAAAGGACATTCCCTTGAGCAACGTTTCTCACAACCTTTTCGGGTTTCCGAACTTCGAGATCACGAGTTCGCCATATGAAATTCGACTATCGAACTGGATTTTGGATCATTTGTCGAACGAGAAGTTGGAAGTGAATCATTATGAAGATCAATACAATAGTTTAGAGTTCTGTTTCTGTCATCCCAATATGAACTGTGCAGTGAGAGATGATCAAACAGATCATTTATGGGATTCCCTAGCTTCCCTTTGGGATATGGAG

Coding sequence (CDS)

ATGGCCAATCAATCAGCTCTTCAAAGTGAGACACTGCGCAGAGGACCTTGGCTTGAAGAGGAAGACAAGCAGCTCACCACGTTTGTAACTCGCATGGGGGAGAGGAAATGGGACTCGATCGCCAAAGCTTCTGGACTTGAGAGAACTGGGAAGAGCTGCAGATTCAGATGGCTCAACTATCTCCGCCCCAATCTTAAGCACGGTTGTATGAGTTCTGAGGAAGAAGAAGTCATTCTGAAACTTCATAAAAAATGGGGAAACAAATGGTCAAGAATTGCGCGGTGGCTTCCGGGAAGAACCGATAACGAGATCAAGAACTACTGGAGAAACCATATGAGGAAAAAGCTCCCCATACAACAAGAAGAGAGCAAAGTAAAACATGGGAAACAGGACAAACTCTCATTCAAGCAATGTGCTATGGGGGGAAGTCCAAGGCAAGACCATAATGAGAGAAAGGACATTCCCTTGAGCAACGTTTCTCACAACCTTTTCGGGTTTCCGAACTTCGAGATCACGAGTTCGCCATATGAAATTCGACTATCGAACTGGATTTTGGATCATTTGTCGAACGAGAAGTTGGAAGTGAATCATTATGAAGATCAATACAATAGTTTAGAGTTCTGTTTCTGTCATCCCAATATGAACTGTGCAGTGAGAGATGATCAAACAGATCATTTATGGGATTCCCTAGCTTCCCTTTGGGATATGGAG

Protein sequence

MANQSALQSETLRRGPWLEEEDKQLTTFVTRMGERKWDSIAKASGLERTGKSCRFRWLNYLRPNLKHGCMSSEEEEVILKLHKKWGNKWSRIARWLPGRTDNEIKNYWRNHMRKKLPIQQEESKVKHGKQDKLSFKQCAMGGSPRQDHNERKDIPLSNVSHNLFGFPNFEITSSPYEIRLSNWILDHLSNEKLEVNHYEDQYNSLEFCFCHPNMNCAVRDDQTDHLWDSLASLWDME
Homology
BLAST of MS019622 vs. NCBI nr
Match: XP_022144763.1 (transcription factor MYB27-like [Momordica charantia])

HSP 1 Score: 504.6 bits (1298), Expect = 4.7e-139
Identity = 236/237 (99.58%), Postives = 236/237 (99.58%), Query Frame = 0

Query: 1   MANQSALQSETLRRGPWLEEEDKQLTTFVTRMGERKWDSIAKASGLERTGKSCRFRWLNY 60
           MANQSALQSETLRRGPWLEEEDKQLTTFVTRMGE KWDSIAKASGLERTGKSCRFRWLNY
Sbjct: 1   MANQSALQSETLRRGPWLEEEDKQLTTFVTRMGESKWDSIAKASGLERTGKSCRFRWLNY 60

Query: 61  LRPNLKHGCMSSEEEEVILKLHKKWGNKWSRIARWLPGRTDNEIKNYWRNHMRKKLPIQQ 120
           LRPNLKHGCMSSEEEEVILKLHKKWGNKWSRIARWLPGRTDNEIKNYWRNHMRKKLPIQQ
Sbjct: 61  LRPNLKHGCMSSEEEEVILKLHKKWGNKWSRIARWLPGRTDNEIKNYWRNHMRKKLPIQQ 120

Query: 121 EESKVKHGKQDKLSFKQCAMGGSPRQDHNERKDIPLSNVSHNLFGFPNFEITSSPYEIRL 180
           EESKVKHGKQDKLSFKQCAMGGSPRQDHNERKDIPLSNVSHNLFGFPNFEITSSPYEIRL
Sbjct: 121 EESKVKHGKQDKLSFKQCAMGGSPRQDHNERKDIPLSNVSHNLFGFPNFEITSSPYEIRL 180

Query: 181 SNWILDHLSNEKLEVNHYEDQYNSLEFCFCHPNMNCAVRDDQTDHLWDSLASLWDME 238
           SNWILDHLSNEKLEVNHYEDQYNSLEFCFCHPNMNCAVRDDQTDHLWDSLASLWDME
Sbjct: 181 SNWILDHLSNEKLEVNHYEDQYNSLEFCFCHPNMNCAVRDDQTDHLWDSLASLWDME 237

BLAST of MS019622 vs. NCBI nr
Match: XP_038903011.1 (transcription factor MYB27-like [Benincasa hispida])

HSP 1 Score: 404.4 bits (1038), Expect = 6.5e-109
Identity = 190/237 (80.17%), Postives = 209/237 (88.19%), Query Frame = 0

Query: 1   MANQSALQSETLRRGPWLEEEDKQLTTFVTRMGERKWDSIAKASGLERTGKSCRFRWLNY 60
           MANQSALQSE LRRGPWLEEED++LT FVTRMGERKWD IAKASGLER+GKSCRFRWLNY
Sbjct: 1   MANQSALQSEKLRRGPWLEEEDRKLTIFVTRMGERKWDLIAKASGLERSGKSCRFRWLNY 60

Query: 61  LRPNLKHGCMSSEEEEVILKLHKKWGNKWSRIARWLPGRTDNEIKNYWRNHMRKKLPIQQ 120
           LRPNLKH  ++SEEEE+ILKLHKKWGNKWSRIA+WLPGRTDNEIKNYWR+H+RKK PIQ 
Sbjct: 61  LRPNLKHDRINSEEEEIILKLHKKWGNKWSRIAQWLPGRTDNEIKNYWRSHLRKKFPIQL 120

Query: 121 EESKVKHGKQDKLSFKQCAMGGSPRQDHNERKDIPLSNVSHNLFGFPNFEITSSPYEIRL 180
           EE K KHGKQDK+S K+C   GSPR DHNERKDIPL N+S N FGF NFEITSSPYEIR+
Sbjct: 121 EECKGKHGKQDKVSSKKCG-AGSPRHDHNERKDIPLCNISCNHFGFSNFEITSSPYEIRV 180

Query: 181 SNWILDHLSNEKLEVNHYEDQYNSLEFCFCHPNMNCAVRDDQTDHLWDSLASLWDME 238
           SNWI   L+NEK EVNH+ +  NSL+FCFC+PNMN A RDD+TDH WDSLASLWDME
Sbjct: 181 SNWISHQLANEKHEVNHHHEDCNSLDFCFCYPNMNFAERDDETDHFWDSLASLWDME 236

BLAST of MS019622 vs. NCBI nr
Match: XP_008442723.1 (PREDICTED: transcription factor MYB114-like [Cucumis melo] >KAA0043980.1 transcription factor MYB114-like protein [Cucumis melo var. makuwa] >TYK25160.1 transcription factor MYB114-like protein [Cucumis melo var. makuwa])

HSP 1 Score: 381.7 bits (979), Expect = 4.5e-102
Identity = 183/240 (76.25%), Postives = 204/240 (85.00%), Query Frame = 0

Query: 1   MANQSALQSETLRRGPWLEEEDKQLTTFVTRMGERKWDSIAKASGLERTGKSCRFRWLNY 60
           MANQSALQ+E LRRGPWLE ED+QLT FVTRMGERKWD IAKASGLER+GKSCRFRWLNY
Sbjct: 1   MANQSALQTERLRRGPWLEAEDRQLTIFVTRMGERKWDLIAKASGLERSGKSCRFRWLNY 60

Query: 61  LRPNLKHGCMSSEEEEVILKLHKKWGNKWSRIARWLPGRTDNEIKNYWRNHMRKKLPIQQ 120
           LRPNLK   ++SEEEE+ILKLHKKWGNKWSRIA+WLPGRTDNEIKNYWR+H+RKK PIQ 
Sbjct: 61  LRPNLKRDRINSEEEEIILKLHKKWGNKWSRIAQWLPGRTDNEIKNYWRSHLRKKFPIQL 120

Query: 121 EESKVKHGKQDKLSFKQCAMGGSP-RQDHNERKDIPLSNVS--HNLFGFPNFEITSSPYE 180
           E +KV+HGKQDK+S K+C + GSP R DHNERKDIP  N+S  H  FGF NFEITSSPYE
Sbjct: 121 EGNKVEHGKQDKVSLKKCGLLGSPNRHDHNERKDIPFCNISCNHFDFGFSNFEITSSPYE 180

Query: 181 IRLSNWILDHLSNEKLEVNHYEDQYNSLEFCFCHPNMNCAVRDDQTDHLWDSLASLWDME 238
           IR+SNWI   L+N K EV  + +  NSL+FCFC+PNMN A RDD TDH WDSLASLWDME
Sbjct: 181 IRVSNWISHQLTNGKPEVIDHHEDCNSLDFCFCYPNMNFAERDDLTDHFWDSLASLWDME 240

BLAST of MS019622 vs. NCBI nr
Match: XP_004137980.1 (transcription factor MYB27 [Cucumis sativus])

HSP 1 Score: 372.9 bits (956), Expect = 2.1e-99
Identity = 178/240 (74.17%), Postives = 203/240 (84.58%), Query Frame = 0

Query: 1   MANQSALQSETLRRGPWLEEEDKQLTTFVTRMGERKWDSIAKASGLERTGKSCRFRWLNY 60
           MA+QSALQ+E LRRGPWLEEED++LT FVTRMGERKWD IAKASGLER+GKSCRFRWLNY
Sbjct: 1   MASQSALQTERLRRGPWLEEEDRRLTIFVTRMGERKWDLIAKASGLERSGKSCRFRWLNY 60

Query: 61  LRPNLKHGCMSSEEEEVILKLHKKWGNKWSRIARWLPGRTDNEIKNYWRNHMRKKLPIQQ 120
           LRPNLK   ++SEEEE+ILKLHKKWGNKWSRIA+WLPGRTDNEIKNYWR+H+RKK PIQ 
Sbjct: 61  LRPNLKRDRINSEEEEIILKLHKKWGNKWSRIAQWLPGRTDNEIKNYWRSHLRKKFPIQL 120

Query: 121 EESKVKHGKQDKLSFKQCAMGGSP-RQDHNERKDIPLSNVSHNL--FGFPNFEITSSPYE 180
           E +KV+  K+DK+S K+C +  SP R DHNERKDIP  N+S+N   FGF N  ITSSPYE
Sbjct: 121 EGNKVEQRKEDKVSLKKCGLLVSPIRHDHNERKDIPSCNISYNHFDFGFSNLAITSSPYE 180

Query: 181 IRLSNWILDHLSNEKLEVNHYEDQYNSLEFCFCHPNMNCAVRDDQTDHLWDSLASLWDME 238
           IR+SNWI   L+NEK EVN + +  NSL+FCFC+PNMN A RDD TDH WDSLASLWDME
Sbjct: 181 IRVSNWISHQLTNEKPEVNDHHEDCNSLDFCFCYPNMNFAERDDMTDHFWDSLASLWDME 240

BLAST of MS019622 vs. NCBI nr
Match: KAE8651048.1 (hypothetical protein Csa_001732 [Cucumis sativus])

HSP 1 Score: 365.5 bits (937), Expect = 3.4e-97
Identity = 178/248 (71.77%), Postives = 203/248 (81.85%), Query Frame = 0

Query: 1   MANQSALQSETLRRGPWLEEEDKQLTTFVTRMGERKWDSIAKAS--------GLERTGKS 60
           MA+QSALQ+E LRRGPWLEEED++LT FVTRMGERKWD IAKAS        GLER+GKS
Sbjct: 1   MASQSALQTERLRRGPWLEEEDRRLTIFVTRMGERKWDLIAKASGIVYSMQYGLERSGKS 60

Query: 61  CRFRWLNYLRPNLKHGCMSSEEEEVILKLHKKWGNKWSRIARWLPGRTDNEIKNYWRNHM 120
           CRFRWLNYLRPNLK   ++SEEEE+ILKLHKKWGNKWSRIA+WLPGRTDNEIKNYWR+H+
Sbjct: 61  CRFRWLNYLRPNLKRDRINSEEEEIILKLHKKWGNKWSRIAQWLPGRTDNEIKNYWRSHL 120

Query: 121 RKKLPIQQEESKVKHGKQDKLSFKQCAMGGSP-RQDHNERKDIPLSNVSHNL--FGFPNF 180
           RKK PIQ E +KV+  K+DK+S K+C +  SP R DHNERKDIP  N+S+N   FGF N 
Sbjct: 121 RKKFPIQLEGNKVEQRKEDKVSLKKCGLLVSPIRHDHNERKDIPSCNISYNHFDFGFSNL 180

Query: 181 EITSSPYEIRLSNWILDHLSNEKLEVNHYEDQYNSLEFCFCHPNMNCAVRDDQTDHLWDS 238
            ITSSPYEIR+SNWI   L+NEK EVN + +  NSL+FCFC+PNMN A RDD TDH WDS
Sbjct: 181 AITSSPYEIRVSNWISHQLTNEKPEVNDHHEDCNSLDFCFCYPNMNFAERDDMTDHFWDS 240

BLAST of MS019622 vs. ExPASy Swiss-Prot
Match: Q9SCP1 (Transcription factor MYB27 OS=Arabidopsis thaliana OX=3702 GN=MYB27 PE=2 SV=1)

HSP 1 Score: 180.6 bits (457), Expect = 2.0e-44
Identity = 95/202 (47.03%), Postives = 130/202 (64.36%), Query Frame = 0

Query: 8   QSETLRRGPWLEEEDKQLTTFVTRMGERKWDSIAKASGLERTGKSCRFRWLNYLRPNLKH 67
           + ETLRRGPWLEEED++L   ++ +GER+WDS+A  SGL+R+GKSCR RW+NYL P LK 
Sbjct: 5   KEETLRRGPWLEEEDERLVKVISLLGERRWDSLAIVSGLKRSGKSCRLRWMNYLNPTLKR 64

Query: 68  GCMSSEEEEVILKLHKKWGNKWSRIARWLPGRTDNEIKNYWRNHMRKKLPIQQE----ES 127
           G MS EEE +I +LH  WGNKWS+IAR LPGRTDNEIKNYWR H RKK   Q      E 
Sbjct: 65  GPMSQEEERIIFQLHALWGNKWSKIARRLPGRTDNEIKNYWRTHYRKKQEAQNYGKLFEW 124

Query: 128 KVKHGKQDKLSFKQCAM--GGSPRQDHNERKDIPLSN---VSHNLFGFPNFEITSSPYEI 187
           +   G++    +K+  +    +  Q+H   + + + +    +  + G  +F +  SPYE 
Sbjct: 125 RGNTGEELLHKYKETEITRTKTTSQEHGFVEVVSMESGKEANGGVGGRESFGVMKSPYEN 184

Query: 188 RLSNWILDHLSNEKLEVNHYED 201
           R+S+WI   +S ++ E N  ED
Sbjct: 185 RISDWI-SEISTDQSEANLSED 205

BLAST of MS019622 vs. ExPASy Swiss-Prot
Match: Q9LX82 (Transcription factor MYB48 OS=Arabidopsis thaliana OX=3702 GN=MYB48 PE=2 SV=1)

HSP 1 Score: 169.5 bits (428), Expect = 4.6e-41
Identity = 95/230 (41.30%), Postives = 125/230 (54.35%), Query Frame = 0

Query: 7   LQSETLRRGPWLEEEDKQLTTFVTRMGERKWDSIAKASGLERTGKSCRFRWLNYLRPNLK 66
           +Q E  R+GPW E+ED  L  FV   G+R+WD IAK SGL RTGKSCR RW+NYL P LK
Sbjct: 2   MQEEGNRKGPWTEQEDILLVNFVHLFGDRRWDFIAKVSGLNRTGKSCRLRWVNYLHPGLK 61

Query: 67  HGCMSSEEEEVILKLHKKWGNKWSRIARWLPGRTDNEIKNYWRNHMRKKLPIQQEESKVK 126
            G M+ +EE ++L+LH KWGN+WS+IAR LPGRTDNEIKNYWR HMRKK    QE+   K
Sbjct: 62  RGKMTPQEERLVLELHAKWGNRWSKIARKLPGRTDNEIKNYWRTHMRKK---AQEK---K 121

Query: 127 HGKQDKLSFKQCAMGGSPRQDHNERKDIPLSNVSHNLFGFPNFEITSSPYEIRLSNWILD 186
                  SF  C+         N +     S  S     F +   + S  E+   N  + 
Sbjct: 122 RPVSPTSSFSNCSSSSVTTTTTNTQDTSCHSRKSSGEVSFYDTGGSRSTREMNQENEDVY 181

Query: 187 HLSNEKLEVNH--------YEDQYNSLEFCFCHPNMNCAVRDDQTDHLWD 229
            L +   E++H         +D Y+    C  +PN+     +   D +W+
Sbjct: 182 SLDDIWREIDHSAVNIIKPVKDIYSEQSHCLSYPNLASPSWESSLDSIWN 225

BLAST of MS019622 vs. ExPASy Swiss-Prot
Match: Q53NK6 (Myb-related protein MYBAS1 OS=Oryza sativa subsp. japonica OX=39947 GN=MYBAS1 PE=2 SV=1)

HSP 1 Score: 164.9 bits (416), Expect = 1.1e-39
Identity = 72/106 (67.92%), Postives = 85/106 (80.19%), Query Frame = 0

Query: 10  ETLRRGPWLEEEDKQLTTFVTRMGERKWDSIAKASGLERTGKSCRFRWLNYLRPNLKHGC 69
           E +R+GPW E+ED QL   V   G+R+WD +AK SGL RTGKSCR RW+NYL P LKHG 
Sbjct: 6   EEMRKGPWTEQEDLQLVCTVRLFGDRRWDFVAKVSGLNRTGKSCRLRWVNYLHPGLKHGR 65

Query: 70  MSSEEEEVILKLHKKWGNKWSRIARWLPGRTDNEIKNYWRNHMRKK 116
           MS +EE +I++LH +WGN+WSRIAR LPGRTDNEIKNYWR HMRKK
Sbjct: 66  MSPKEEHLIIELHARWGNRWSRIARRLPGRTDNEIKNYWRTHMRKK 111

BLAST of MS019622 vs. ExPASy Swiss-Prot
Match: Q4JL76 (Myb-related protein MYBAS2 OS=Oryza sativa subsp. japonica OX=39947 GN=MYBAS2 PE=2 SV=1)

HSP 1 Score: 163.3 bits (412), Expect = 3.3e-39
Identity = 76/129 (58.91%), Postives = 92/129 (71.32%), Query Frame = 0

Query: 10  ETLRRGPWLEEEDKQLTTFVTRMGERKWDSIAKASGLERTGKSCRFRWLNYLRPNLKHGC 69
           E +R+GPW E+ED QL   V   GER+WD IAK SGL RTGKSCR RW+NYL P LK G 
Sbjct: 6   EEIRKGPWTEQEDLQLVCTVRLFGERRWDFIAKVSGLNRTGKSCRLRWVNYLHPGLKRGR 65

Query: 70  MSSEEEEVILKLHKKWGNKWSRIARWLPGRTDNEIKNYWRNHMRKKLPIQQEESKVKHGK 129
           MS  EE +IL+LH +WGN+WSRIAR LPGRTDNEIKNYWR HMRKK   +++ +      
Sbjct: 66  MSPHEERLILELHARWGNRWSRIARRLPGRTDNEIKNYWRTHMRKKAQ-ERKSNMSPSSS 125

Query: 130 QDKLSFKQC 139
              L+++ C
Sbjct: 126 SSSLTYQSC 133

BLAST of MS019622 vs. ExPASy Swiss-Prot
Match: Q4JL84 (Transcription factor MYB59 OS=Arabidopsis thaliana OX=3702 GN=MYB59 PE=2 SV=2)

HSP 1 Score: 161.0 bits (406), Expect = 1.7e-38
Identity = 71/109 (65.14%), Postives = 84/109 (77.06%), Query Frame = 0

Query: 7   LQSETLRRGPWLEEEDKQLTTFVTRMGERKWDSIAKASGLERTGKSCRFRWLNYLRPNLK 66
           L  E  R+GPW E+ED  L  FV   G+R+WD +AK SGL RTGKSCR RW+NYL P LK
Sbjct: 3   LVQEEYRKGPWTEQEDILLVNFVHLFGDRRWDFVAKVSGLNRTGKSCRLRWVNYLHPGLK 62

Query: 67  HGCMSSEEEEVILKLHKKWGNKWSRIARWLPGRTDNEIKNYWRNHMRKK 116
            G M+ +EE ++L+LH KWGN+WS+IAR LPGRTDNEIKNYWR HMRKK
Sbjct: 63  RGKMTPQEERLVLELHAKWGNRWSKIARKLPGRTDNEIKNYWRTHMRKK 111

BLAST of MS019622 vs. ExPASy TrEMBL
Match: A0A6J1CU61 (transcription factor MYB27-like OS=Momordica charantia OX=3673 GN=LOC111014374 PE=4 SV=1)

HSP 1 Score: 504.6 bits (1298), Expect = 2.3e-139
Identity = 236/237 (99.58%), Postives = 236/237 (99.58%), Query Frame = 0

Query: 1   MANQSALQSETLRRGPWLEEEDKQLTTFVTRMGERKWDSIAKASGLERTGKSCRFRWLNY 60
           MANQSALQSETLRRGPWLEEEDKQLTTFVTRMGE KWDSIAKASGLERTGKSCRFRWLNY
Sbjct: 1   MANQSALQSETLRRGPWLEEEDKQLTTFVTRMGESKWDSIAKASGLERTGKSCRFRWLNY 60

Query: 61  LRPNLKHGCMSSEEEEVILKLHKKWGNKWSRIARWLPGRTDNEIKNYWRNHMRKKLPIQQ 120
           LRPNLKHGCMSSEEEEVILKLHKKWGNKWSRIARWLPGRTDNEIKNYWRNHMRKKLPIQQ
Sbjct: 61  LRPNLKHGCMSSEEEEVILKLHKKWGNKWSRIARWLPGRTDNEIKNYWRNHMRKKLPIQQ 120

Query: 121 EESKVKHGKQDKLSFKQCAMGGSPRQDHNERKDIPLSNVSHNLFGFPNFEITSSPYEIRL 180
           EESKVKHGKQDKLSFKQCAMGGSPRQDHNERKDIPLSNVSHNLFGFPNFEITSSPYEIRL
Sbjct: 121 EESKVKHGKQDKLSFKQCAMGGSPRQDHNERKDIPLSNVSHNLFGFPNFEITSSPYEIRL 180

Query: 181 SNWILDHLSNEKLEVNHYEDQYNSLEFCFCHPNMNCAVRDDQTDHLWDSLASLWDME 238
           SNWILDHLSNEKLEVNHYEDQYNSLEFCFCHPNMNCAVRDDQTDHLWDSLASLWDME
Sbjct: 181 SNWILDHLSNEKLEVNHYEDQYNSLEFCFCHPNMNCAVRDDQTDHLWDSLASLWDME 237

BLAST of MS019622 vs. ExPASy TrEMBL
Match: A0A5D3DPF8 (Transcription factor MYB114-like protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold352G002860 PE=4 SV=1)

HSP 1 Score: 381.7 bits (979), Expect = 2.2e-102
Identity = 183/240 (76.25%), Postives = 204/240 (85.00%), Query Frame = 0

Query: 1   MANQSALQSETLRRGPWLEEEDKQLTTFVTRMGERKWDSIAKASGLERTGKSCRFRWLNY 60
           MANQSALQ+E LRRGPWLE ED+QLT FVTRMGERKWD IAKASGLER+GKSCRFRWLNY
Sbjct: 1   MANQSALQTERLRRGPWLEAEDRQLTIFVTRMGERKWDLIAKASGLERSGKSCRFRWLNY 60

Query: 61  LRPNLKHGCMSSEEEEVILKLHKKWGNKWSRIARWLPGRTDNEIKNYWRNHMRKKLPIQQ 120
           LRPNLK   ++SEEEE+ILKLHKKWGNKWSRIA+WLPGRTDNEIKNYWR+H+RKK PIQ 
Sbjct: 61  LRPNLKRDRINSEEEEIILKLHKKWGNKWSRIAQWLPGRTDNEIKNYWRSHLRKKFPIQL 120

Query: 121 EESKVKHGKQDKLSFKQCAMGGSP-RQDHNERKDIPLSNVS--HNLFGFPNFEITSSPYE 180
           E +KV+HGKQDK+S K+C + GSP R DHNERKDIP  N+S  H  FGF NFEITSSPYE
Sbjct: 121 EGNKVEHGKQDKVSLKKCGLLGSPNRHDHNERKDIPFCNISCNHFDFGFSNFEITSSPYE 180

Query: 181 IRLSNWILDHLSNEKLEVNHYEDQYNSLEFCFCHPNMNCAVRDDQTDHLWDSLASLWDME 238
           IR+SNWI   L+N K EV  + +  NSL+FCFC+PNMN A RDD TDH WDSLASLWDME
Sbjct: 181 IRVSNWISHQLTNGKPEVIDHHEDCNSLDFCFCYPNMNFAERDDLTDHFWDSLASLWDME 240

BLAST of MS019622 vs. ExPASy TrEMBL
Match: A0A1S3B717 (transcription factor MYB114-like OS=Cucumis melo OX=3656 GN=LOC103486512 PE=4 SV=1)

HSP 1 Score: 381.7 bits (979), Expect = 2.2e-102
Identity = 183/240 (76.25%), Postives = 204/240 (85.00%), Query Frame = 0

Query: 1   MANQSALQSETLRRGPWLEEEDKQLTTFVTRMGERKWDSIAKASGLERTGKSCRFRWLNY 60
           MANQSALQ+E LRRGPWLE ED+QLT FVTRMGERKWD IAKASGLER+GKSCRFRWLNY
Sbjct: 1   MANQSALQTERLRRGPWLEAEDRQLTIFVTRMGERKWDLIAKASGLERSGKSCRFRWLNY 60

Query: 61  LRPNLKHGCMSSEEEEVILKLHKKWGNKWSRIARWLPGRTDNEIKNYWRNHMRKKLPIQQ 120
           LRPNLK   ++SEEEE+ILKLHKKWGNKWSRIA+WLPGRTDNEIKNYWR+H+RKK PIQ 
Sbjct: 61  LRPNLKRDRINSEEEEIILKLHKKWGNKWSRIAQWLPGRTDNEIKNYWRSHLRKKFPIQL 120

Query: 121 EESKVKHGKQDKLSFKQCAMGGSP-RQDHNERKDIPLSNVS--HNLFGFPNFEITSSPYE 180
           E +KV+HGKQDK+S K+C + GSP R DHNERKDIP  N+S  H  FGF NFEITSSPYE
Sbjct: 121 EGNKVEHGKQDKVSLKKCGLLGSPNRHDHNERKDIPFCNISCNHFDFGFSNFEITSSPYE 180

Query: 181 IRLSNWILDHLSNEKLEVNHYEDQYNSLEFCFCHPNMNCAVRDDQTDHLWDSLASLWDME 238
           IR+SNWI   L+N K EV  + +  NSL+FCFC+PNMN A RDD TDH WDSLASLWDME
Sbjct: 181 IRVSNWISHQLTNGKPEVIDHHEDCNSLDFCFCYPNMNFAERDDLTDHFWDSLASLWDME 240

BLAST of MS019622 vs. ExPASy TrEMBL
Match: A0A6J1FF95 (transcription factor MYB27-like isoform X2 OS=Cucurbita moschata OX=3662 GN=LOC111443404 PE=4 SV=1)

HSP 1 Score: 338.6 bits (867), Expect = 2.1e-89
Identity = 169/237 (71.31%), Postives = 189/237 (79.75%), Query Frame = 0

Query: 1   MANQSALQSETLRRGPWLEEEDKQLTTFVTRMGERKWDSIAKASGLERTGKSCRFRWLNY 60
           MA  SALQ+E  RRGPWLE+ED+QLT FVTRMGERKWDSIAKASGLER+GKSCRFRWLNY
Sbjct: 1   MATHSALQTEIQRRGPWLEQEDRQLTMFVTRMGERKWDSIAKASGLERSGKSCRFRWLNY 60

Query: 61  LRPNLKHGCMSSEEEEVILKLHKKWGNKWSRIARWLPGRTDNEIKNYWRNHMRKKLPIQQ 120
           LRP+LK   ++SEEEE+ILKLHKKWGNKWSRIARWLPGRTDNEIKNYWR+H+RKK PIQ 
Sbjct: 61  LRPSLKRDRINSEEEEIILKLHKKWGNKWSRIARWLPGRTDNEIKNYWRSHLRKKFPIQL 120

Query: 121 EESKVKHGKQDKLSFKQCAMGGSPRQDHNERKDIPLSNVSHNLFGFPNFEITSSPYEIRL 180
           E+ KVKHGK +KLS          R D NER D+PL    +N F   N EITSSPYE RL
Sbjct: 121 EDCKVKHGKPEKLSL---------RHDQNER-DVPL----YNHFELSNLEITSSPYETRL 180

Query: 181 SNWILDHLSNEKLEVNHYEDQYNSLEFCFCHPNMNCAVRDDQTDHLWDSLASLWDME 238
           SNWI + L NEK EVNH+E+  NS EFCF +PNMN A RDDQ+DH WDSL  LWD+E
Sbjct: 181 SNWISNPLMNEKQEVNHHEECNNS-EFCFYYPNMNYARRDDQSDHFWDSLTPLWDIE 222

BLAST of MS019622 vs. ExPASy TrEMBL
Match: A0A6J1KW53 (transcription factor MYB114-like OS=Cucurbita maxima OX=3661 GN=LOC111498725 PE=4 SV=1)

HSP 1 Score: 335.5 bits (859), Expect = 1.8e-88
Identity = 170/237 (71.73%), Postives = 183/237 (77.22%), Query Frame = 0

Query: 1   MANQSALQSETLRRGPWLEEEDKQLTTFVTRMGERKWDSIAKASGLERTGKSCRFRWLNY 60
           MA  SAL +E  RRGPWLE ED+QLT FV RMGERKWDSIAKASGLER+GKSCRFRWLNY
Sbjct: 1   MATHSALHTEIQRRGPWLEHEDRQLTMFVNRMGERKWDSIAKASGLERSGKSCRFRWLNY 60

Query: 61  LRPNLKHGCMSSEEEEVILKLHKKWGNKWSRIARWLPGRTDNEIKNYWRNHMRKKLPIQQ 120
           LRPNLK   +S EEEE+ILKLHKKWGNKWSRIARWLPGRTDNEIKNYWR+H+RKK PI  
Sbjct: 61  LRPNLKCDRISIEEEEIILKLHKKWGNKWSRIARWLPGRTDNEIKNYWRSHLRKKFPIHL 120

Query: 121 EESKVKHGKQDKLSFKQCAMGGSPRQDHNERKDIPLSNVSHNLFGFPNFEITSSPYEIRL 180
           E  KVKHGKQDKLS          R D NER D+P    S+N FG  N EITSSPYEIRL
Sbjct: 121 EACKVKHGKQDKLSL---------RHDQNER-DVP----SYNHFGLSNLEITSSPYEIRL 180

Query: 181 SNWILDHLSNEKLEVNHYEDQYNSLEFCFCHPNMNCAVRDDQTDHLWDSLASLWDME 238
           SNWI + L NEK EVNH+E   NSLEFCF +PNMN A R DQ DH WDS   LWD+E
Sbjct: 181 SNWISNQLMNEKQEVNHHE-VCNSLEFCFYYPNMNYAHRVDQIDHFWDSFTPLWDIE 222

BLAST of MS019622 vs. TAIR 10
Match: AT3G53200.1 (myb domain protein 27 )

HSP 1 Score: 180.6 bits (457), Expect = 1.4e-45
Identity = 95/202 (47.03%), Postives = 130/202 (64.36%), Query Frame = 0

Query: 8   QSETLRRGPWLEEEDKQLTTFVTRMGERKWDSIAKASGLERTGKSCRFRWLNYLRPNLKH 67
           + ETLRRGPWLEEED++L   ++ +GER+WDS+A  SGL+R+GKSCR RW+NYL P LK 
Sbjct: 5   KEETLRRGPWLEEEDERLVKVISLLGERRWDSLAIVSGLKRSGKSCRLRWMNYLNPTLKR 64

Query: 68  GCMSSEEEEVILKLHKKWGNKWSRIARWLPGRTDNEIKNYWRNHMRKKLPIQQE----ES 127
           G MS EEE +I +LH  WGNKWS+IAR LPGRTDNEIKNYWR H RKK   Q      E 
Sbjct: 65  GPMSQEEERIIFQLHALWGNKWSKIARRLPGRTDNEIKNYWRTHYRKKQEAQNYGKLFEW 124

Query: 128 KVKHGKQDKLSFKQCAM--GGSPRQDHNERKDIPLSN---VSHNLFGFPNFEITSSPYEI 187
           +   G++    +K+  +    +  Q+H   + + + +    +  + G  +F +  SPYE 
Sbjct: 125 RGNTGEELLHKYKETEITRTKTTSQEHGFVEVVSMESGKEANGGVGGRESFGVMKSPYEN 184

Query: 188 RLSNWILDHLSNEKLEVNHYED 201
           R+S+WI   +S ++ E N  ED
Sbjct: 185 RISDWI-SEISTDQSEANLSED 205

BLAST of MS019622 vs. TAIR 10
Match: AT3G46130.1 (myb domain protein 48 )

HSP 1 Score: 169.5 bits (428), Expect = 3.3e-42
Identity = 95/230 (41.30%), Postives = 125/230 (54.35%), Query Frame = 0

Query: 7   LQSETLRRGPWLEEEDKQLTTFVTRMGERKWDSIAKASGLERTGKSCRFRWLNYLRPNLK 66
           +Q E  R+GPW E+ED  L  FV   G+R+WD IAK SGL RTGKSCR RW+NYL P LK
Sbjct: 2   MQEEGNRKGPWTEQEDILLVNFVHLFGDRRWDFIAKVSGLNRTGKSCRLRWVNYLHPGLK 61

Query: 67  HGCMSSEEEEVILKLHKKWGNKWSRIARWLPGRTDNEIKNYWRNHMRKKLPIQQEESKVK 126
            G M+ +EE ++L+LH KWGN+WS+IAR LPGRTDNEIKNYWR HMRKK    QE+   K
Sbjct: 62  RGKMTPQEERLVLELHAKWGNRWSKIARKLPGRTDNEIKNYWRTHMRKK---AQEK---K 121

Query: 127 HGKQDKLSFKQCAMGGSPRQDHNERKDIPLSNVSHNLFGFPNFEITSSPYEIRLSNWILD 186
                  SF  C+         N +     S  S     F +   + S  E+   N  + 
Sbjct: 122 RPVSPTSSFSNCSSSSVTTTTTNTQDTSCHSRKSSGEVSFYDTGGSRSTREMNQENEDVY 181

Query: 187 HLSNEKLEVNH--------YEDQYNSLEFCFCHPNMNCAVRDDQTDHLWD 229
            L +   E++H         +D Y+    C  +PN+     +   D +W+
Sbjct: 182 SLDDIWREIDHSAVNIIKPVKDIYSEQSHCLSYPNLASPSWESSLDSIWN 225

BLAST of MS019622 vs. TAIR 10
Match: AT5G59780.3 (myb domain protein 59 )

HSP 1 Score: 161.0 bits (406), Expect = 1.2e-39
Identity = 71/109 (65.14%), Postives = 84/109 (77.06%), Query Frame = 0

Query: 7   LQSETLRRGPWLEEEDKQLTTFVTRMGERKWDSIAKASGLERTGKSCRFRWLNYLRPNLK 66
           L  E  R+GPW E+ED  L  FV   G+R+WD +AK SGL RTGKSCR RW+NYL P LK
Sbjct: 3   LVQEEYRKGPWTEQEDILLVNFVHLFGDRRWDFVAKVSGLNRTGKSCRLRWVNYLHPGLK 62

Query: 67  HGCMSSEEEEVILKLHKKWGNKWSRIARWLPGRTDNEIKNYWRNHMRKK 116
            G M+ +EE ++L+LH KWGN+WS+IAR LPGRTDNEIKNYWR HMRKK
Sbjct: 63  RGKMTPQEERLVLELHAKWGNRWSKIARKLPGRTDNEIKNYWRTHMRKK 111

BLAST of MS019622 vs. TAIR 10
Match: AT3G30210.1 (myb domain protein 121 )

HSP 1 Score: 156.0 bits (393), Expect = 3.8e-38
Identity = 73/136 (53.68%), Postives = 93/136 (68.38%), Query Frame = 0

Query: 4   QSALQSETLRRGPWLEEEDKQLTTFVTRMGERKWDSIAKASGLERTGKSCRFRWLNYLRP 63
           Q   Q +  R+GPW  EEDK L  +VT  GE +W ++AK +GL R+GKSCR RW+NYLRP
Sbjct: 19  QQQHQQQGCRKGPWTLEEDKLLAEYVTSHGEGRWSTVAKCAGLNRSGKSCRLRWVNYLRP 78

Query: 64  NLKHGCMSSEEEEVILKLHKKWGNKWSRIARWLPGRTDNEIKNYWRNHMRKKLPIQQEES 123
            LK G ++ +EE +IL+LH  WGNKWS IAR+LPGRTDNEIKNYWR H +K      ++ 
Sbjct: 79  GLKRGQITPQEEGIILELHSLWGNKWSTIARYLPGRTDNEIKNYWRTHYKKNQKSSSKQD 138

Query: 124 KVKHG---KQDKLSFK 137
           KVK     KQ ++  K
Sbjct: 139 KVKKSLSRKQQQVDLK 154

BLAST of MS019622 vs. TAIR 10
Match: AT4G13480.1 (myb domain protein 79 )

HSP 1 Score: 151.4 bits (381), Expect = 9.3e-37
Identity = 70/129 (54.26%), Postives = 90/129 (69.77%), Query Frame = 0

Query: 10  ETLRRGPWLEEEDKQLTTFVTRMGERKWDSIAKASGLERTGKSCRFRWLNYLRPNLKHGC 69
           E  R+GPW  EED+ L  +V   GE +W+S++K +GL+R GKSCR RW+NYLRP+LK G 
Sbjct: 4   EVWRKGPWTAEEDRLLIEYVRVHGEGRWNSVSKLAGLKRNGKSCRLRWVNYLRPDLKRGQ 63

Query: 70  MSSEEEEVILKLHKKWGNKWSRIARWLPGRTDNEIKNYWRNHMRKKL-PIQQEESKVKHG 129
           ++  EE +IL+LH KWGN+WS IAR LPGRTDNEIKNYWR H +KK  P      K+K  
Sbjct: 64  ITPHEESIILELHAKWGNRWSTIARSLPGRTDNEIKNYWRTHFKKKAKPTTNNAEKIKSR 123

Query: 130 KQDKLSFKQ 138
              +  FK+
Sbjct: 124 LLKRQHFKE 132

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
XP_022144763.14.7e-13999.58transcription factor MYB27-like [Momordica charantia][more]
XP_038903011.16.5e-10980.17transcription factor MYB27-like [Benincasa hispida][more]
XP_008442723.14.5e-10276.25PREDICTED: transcription factor MYB114-like [Cucumis melo] >KAA0043980.1 transcr... [more]
XP_004137980.12.1e-9974.17transcription factor MYB27 [Cucumis sativus][more]
KAE8651048.13.4e-9771.77hypothetical protein Csa_001732 [Cucumis sativus][more]
Match NameE-valueIdentityDescription
Q9SCP12.0e-4447.03Transcription factor MYB27 OS=Arabidopsis thaliana OX=3702 GN=MYB27 PE=2 SV=1[more]
Q9LX824.6e-4141.30Transcription factor MYB48 OS=Arabidopsis thaliana OX=3702 GN=MYB48 PE=2 SV=1[more]
Q53NK61.1e-3967.92Myb-related protein MYBAS1 OS=Oryza sativa subsp. japonica OX=39947 GN=MYBAS1 PE... [more]
Q4JL763.3e-3958.91Myb-related protein MYBAS2 OS=Oryza sativa subsp. japonica OX=39947 GN=MYBAS2 PE... [more]
Q4JL841.7e-3865.14Transcription factor MYB59 OS=Arabidopsis thaliana OX=3702 GN=MYB59 PE=2 SV=2[more]
Match NameE-valueIdentityDescription
A0A6J1CU612.3e-13999.58transcription factor MYB27-like OS=Momordica charantia OX=3673 GN=LOC111014374 P... [more]
A0A5D3DPF82.2e-10276.25Transcription factor MYB114-like protein OS=Cucumis melo var. makuwa OX=1194695 ... [more]
A0A1S3B7172.2e-10276.25transcription factor MYB114-like OS=Cucumis melo OX=3656 GN=LOC103486512 PE=4 SV... [more]
A0A6J1FF952.1e-8971.31transcription factor MYB27-like isoform X2 OS=Cucurbita moschata OX=3662 GN=LOC1... [more]
A0A6J1KW531.8e-8871.73transcription factor MYB114-like OS=Cucurbita maxima OX=3661 GN=LOC111498725 PE=... [more]
Match NameE-valueIdentityDescription
AT3G53200.11.4e-4547.03myb domain protein 27 [more]
AT3G46130.13.3e-4241.30myb domain protein 48 [more]
AT5G59780.31.2e-3965.14myb domain protein 59 [more]
AT3G30210.13.8e-3853.68myb domain protein 121 [more]
AT4G13480.19.3e-3754.26myb domain protein 79 [more]
InterPro
Analysis Name: InterPro Annotations of Bitter gourd (TR) v1
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001005SANT/Myb domainSMARTSM00717santcoord: 66..114
e-value: 2.0E-12
score: 57.3
coord: 13..63
e-value: 1.1E-12
score: 58.2
IPR001005SANT/Myb domainPROSITEPS50090MYB_LIKEcoord: 9..61
score: 11.393172
IPR001005SANT/Myb domainPROSITEPS50090MYB_LIKEcoord: 62..112
score: 9.953235
IPR001005SANT/Myb domainCDDcd00167SANTcoord: 16..61
e-value: 1.96086E-8
score: 47.185
IPR001005SANT/Myb domainCDDcd00167SANTcoord: 70..112
e-value: 1.82325E-9
score: 49.8814
NoneNo IPR availableGENE3D1.10.10.60coord: 6..67
e-value: 1.6E-17
score: 65.1
NoneNo IPR availableGENE3D1.10.10.60coord: 69..138
e-value: 5.7E-19
score: 69.9
NoneNo IPR availablePANTHERPTHR10641 MYB FAMILY TRANSCRIPTION FACTORcoord: 1..237
NoneNo IPR availablePANTHERPTHR10641:SF1230MYB TRANSCRIPTION FACTORcoord: 1..237
IPR017930Myb domainPFAMPF00249Myb_DNA-bindingcoord: 14..61
e-value: 4.8E-14
score: 52.3
coord: 68..111
e-value: 7.1E-13
score: 48.5
IPR017930Myb domainPROSITEPS51294HTH_MYBcoord: 9..61
score: 18.668554
IPR017930Myb domainPROSITEPS51294HTH_MYBcoord: 62..116
score: 25.733042
IPR009057Homeobox-like domain superfamilySUPERFAMILY46689Homeodomain-likecoord: 12..108

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
MS019622.1MS019622.1mRNA