MS019593 (gene) Bitter gourd (TR) v1

Overview
NameMS019593
Typegene
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
DescriptionUnknown protein
Locationscaffold729: 840283 .. 840483 (-)
RNA-Seq ExpressionMS019593
SyntenyMS019593
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
GTGGACGGTGGAGATGGATTTGGTGGCGGAGGAATATTTGGAGCCGTTGGATGGAAATTGACAGAGATGGCAAAGTTTGGCGCTTACGCTGCTTTTGGATCTTCCTTGCGTCTCTACGTTGGCACGAGGTCGGCCTTTCCTCTACGCTTGACCTTATTCCTCTCACCTACCATCAACGGTTACCAATCCGCCACGTTTCCT

mRNA sequence

GTGGACGGTGGAGATGGATTTGGTGGCGGAGGAATATTTGGAGCCGTTGGATGGAAATTGACAGAGATGGCAAAGTTTGGCGCTTACGCTGCTTTTGGATCTTCCTTGCGTCTCTACGTTGGCACGAGGTCGGCCTTTCCTCTACGCTTGACCTTATTCCTCTCACCTACCATCAACGGTTACCAATCCGCCACGTTTCCT

Coding sequence (CDS)

GTGGACGGTGGAGATGGATTTGGTGGCGGAGGAATATTTGGAGCCGTTGGATGGAAATTGACAGAGATGGCAAAGTTTGGCGCTTACGCTGCTTTTGGATCTTCCTTGCGTCTCTACGTTGGCACGAGGTCGGCCTTTCCTCTACGCTTGACCTTATTCCTCTCACCTACCATCAACGGTTACCAATCCGCCACGTTTCCT

Protein sequence

VDGGDGFGGGGIFGAVGWKLTEMAKFGAYAAFGSSLRLYVGTRSAFPLRLTLFLSPTINGYQSATFP
Homology
[Close]
BLAST of MS019593 vs. NCBI nr
Match: KGN59218.2 (hypothetical protein Csa_001496, partial [Cucumis sativus])

HSP 1 Score: 78.6 bits (192), Expect = 2.3e-11
Identity = 40/49 (81.63%), Postives = 43/49 (87.76%), Query Frame = 0 

Query: 19 KLTEMAKFGAYAAFGSSLRLYVGTRSAFPLRLTLFLSPTINGYQSATFP 68
          +LTEMAKFGAYAAFGSSLRLYVGTRSAFPLRL LFL+  ING  S+T P
Sbjct: 19 ELTEMAKFGAYAAFGSSLRLYVGTRSAFPLRLILFLNILINGSHSSTCP 67

[Close]
BLAST of MS019593 vs. ExPASy TrEMBL
Match: A0A0A0LB76 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G746600 PE=4 SV=1)

HSP 1 Score: 78.6 bits (192), Expect = 1.1e-11
Identity = 40/49 (81.63%), Postives = 43/49 (87.76%), Query Frame = 0 

Query: 19 KLTEMAKFGAYAAFGSSLRLYVGTRSAFPLRLTLFLSPTINGYQSATFP 68
          +LTEMAKFGAYAAFGSSLRLYVGTRSAFPLRL LFL+  ING  S+T P
Sbjct: 19 ELTEMAKFGAYAAFGSSLRLYVGTRSAFPLRLILFLNILINGSHSSTCP 67

The following BLAST results are available for this feature:
BLAST of MS019593 vs. NCBI nr
Match NameE-valueIdentityDescription
KGN59218.22.3e-1181.63hypothetical protein Csa_001496, partial [Cucumis sativus][more]
BLAST of MS019593 vs. NCBI nr
Match NameE-valueIdentityDescription
BLAST of MS019593 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A0A0LB761.1e-1181.63Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G746600 PE=4 SV=1[more]
BLAST of MS019593 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
MS019593.1MS019593.1mRNA