MS019590 (gene) Bitter gourd (TR) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATGGCACCTCTCCTGCGGCTGATAATGGCGGCTTCAGTTCTAATCGCCTGTACCAATATCGTAGCGGCCGCGGATGACGCCGGCGTCATTCATATCGGCGGCAAAGTGCTCTGCCAGGACTGCACCCAGGGCTGGAACGAGTGGATCAATGGCAAACCGCTCAAAGGTAATCCTGAATCTAATCTTCGATTTCGATCGGAATGACTTTCGATTTTGCGAACTGTTGATTGCAATTGATGTTAATCGACGATCTCGATTTCAGATTGTAAGGTCTCTGTAACGTGCTTGGACGAGAGAAGCAGAGTGATGCACTACGCGAGCGATCTGACGGACGAATTAGGGCAATTTGATATCACAATCGACAAGTTGGTCCACGGCAAGAAATTGAATCCGAAGAAATGCTCGGTGCGGCTCGTTTCTTCTCCAGATCCGACGTGCAACATTATGACCGATTTCGCCGGCGGCCGGTCCGGCGTTCAACTCCGAGGACCGAGCTTGATGTATCGCGATTTCGTCAAGTACGTTCTCGGTCCATTTTACTTCACCTCGCCGATGTGCGAAGAACCTAATACAGATGATTCCGATGACAACAACGGCAAAAATTAC ATGGCACCTCTCCTGCGGCTGATAATGGCGGCTTCAGTTCTAATCGCCTGTACCAATATCGTAGCGGCCGCGGATGACGCCGGCGTCATTCATATCGGCGGCAAAGTGCTCTGCCAGGACTGCACCCAGGGCTGGAACGAGTGGATCAATGGCAAACCGCTCAAAGATTGTAAGGTCTCTGTAACGTGCTTGGACGAGAGAAGCAGAGTGATGCACTACGCGAGCGATCTGACGGACGAATTAGGGCAATTTGATATCACAATCGACAAGTTGGTCCACGGCAAGAAATTGAATCCGAAGAAATGCTCGGTGCGGCTCGTTTCTTCTCCAGATCCGACGTGCAACATTATGACCGATTTCGCCGGCGGCCGGTCCGGCGTTCAACTCCGAGGACCGAGCTTGATGTATCGCGATTTCGTCAAGTACGTTCTCGGTCCATTTTACTTCACCTCGCCGATGTGCGAAGAACCTAATACAGATGATTCCGATGACAACAACGGCAAAAATTAC ATGGCACCTCTCCTGCGGCTGATAATGGCGGCTTCAGTTCTAATCGCCTGTACCAATATCGTAGCGGCCGCGGATGACGCCGGCGTCATTCATATCGGCGGCAAAGTGCTCTGCCAGGACTGCACCCAGGGCTGGAACGAGTGGATCAATGGCAAACCGCTCAAAGATTGTAAGGTCTCTGTAACGTGCTTGGACGAGAGAAGCAGAGTGATGCACTACGCGAGCGATCTGACGGACGAATTAGGGCAATTTGATATCACAATCGACAAGTTGGTCCACGGCAAGAAATTGAATCCGAAGAAATGCTCGGTGCGGCTCGTTTCTTCTCCAGATCCGACGTGCAACATTATGACCGATTTCGCCGGCGGCCGGTCCGGCGTTCAACTCCGAGGACCGAGCTTGATGTATCGCGATTTCGTCAAGTACGTTCTCGGTCCATTTTACTTCACCTCGCCGATGTGCGAAGAACCTAATACAGATGATTCCGATGACAACAACGGCAAAAATTAC MAPLLRLIMAASVLIACTNIVAAADDAGVIHIGGKVLCQDCTQGWNEWINGKPLKDCKVSVTCLDERSRVMHYASDLTDELGQFDITIDKLVHGKKLNPKKCSVRLVSSPDPTCNIMTDFAGGRSGVQLRGPSLMYRDFVKYVLGPFYFTSPMCEEPNTDDSDDNNGKNY Homology
BLAST of MS019590 vs. NCBI nr
Match: XP_022144725.1 (pistil-specific extensin-like protein [Momordica charantia]) HSP 1 Score: 354.8 bits (909), Expect = 4.3e-94 Identity = 169/170 (99.41%), Postives = 169/170 (99.41%), Query Frame = 0
BLAST of MS019590 vs. NCBI nr
Match: XP_038905672.1 (pistil-specific extensin-like protein [Benincasa hispida]) HSP 1 Score: 320.9 bits (821), Expect = 6.8e-84 Identity = 152/171 (88.89%), Postives = 160/171 (93.57%), Query Frame = 0
BLAST of MS019590 vs. NCBI nr
Match: XP_023528335.1 (uncharacterized protein LOC111791287 [Cucurbita pepo subsp. pepo]) HSP 1 Score: 308.1 bits (788), Expect = 4.6e-80 Identity = 145/171 (84.80%), Postives = 156/171 (91.23%), Query Frame = 0
BLAST of MS019590 vs. NCBI nr
Match: XP_004137994.2 (pistil-specific extensin-like protein [Cucumis sativus] >KGN59025.1 hypothetical protein Csa_001709 [Cucumis sativus]) HSP 1 Score: 305.1 bits (780), Expect = 3.9e-79 Identity = 146/168 (86.90%), Postives = 154/168 (91.67%), Query Frame = 0
BLAST of MS019590 vs. NCBI nr
Match: XP_022983120.1 (pistil-specific extensin-like protein [Cucurbita maxima]) HSP 1 Score: 303.9 bits (777), Expect = 8.6e-79 Identity = 143/171 (83.63%), Postives = 154/171 (90.06%), Query Frame = 0
BLAST of MS019590 vs. ExPASy Swiss-Prot
Match: Q03211 (Pistil-specific extensin-like protein OS=Nicotiana tabacum OX=4097 PE=2 SV=1) HSP 1 Score: 55.5 bits (132), Expect = 7.0e-07 Identity = 34/100 (34.00%), Postives = 52/100 (52.00%), Query Frame = 0
BLAST of MS019590 vs. ExPASy TrEMBL
Match: A0A6J1CSG0 (pistil-specific extensin-like protein OS=Momordica charantia OX=3673 GN=LOC111014344 PE=4 SV=1) HSP 1 Score: 354.8 bits (909), Expect = 2.1e-94 Identity = 169/170 (99.41%), Postives = 169/170 (99.41%), Query Frame = 0
BLAST of MS019590 vs. ExPASy TrEMBL
Match: A0A0A0LAP0 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G746570 PE=4 SV=1) HSP 1 Score: 305.1 bits (780), Expect = 1.9e-79 Identity = 146/168 (86.90%), Postives = 154/168 (91.67%), Query Frame = 0
BLAST of MS019590 vs. ExPASy TrEMBL
Match: A0A6J1J4V1 (pistil-specific extensin-like protein OS=Cucurbita maxima OX=3661 GN=LOC111481763 PE=4 SV=1) HSP 1 Score: 303.9 bits (777), Expect = 4.2e-79 Identity = 143/171 (83.63%), Postives = 154/171 (90.06%), Query Frame = 0
BLAST of MS019590 vs. ExPASy TrEMBL
Match: A0A1S3B787 (pistil-specific extensin-like protein OS=Cucumis melo OX=3656 GN=LOC103486544 PE=4 SV=1) HSP 1 Score: 303.5 bits (776), Expect = 5.5e-79 Identity = 145/168 (86.31%), Postives = 153/168 (91.07%), Query Frame = 0
BLAST of MS019590 vs. ExPASy TrEMBL
Match: A0A6J1F3T9 (uncharacterized protein LOC111442130 OS=Cucurbita moschata OX=3662 GN=LOC111442130 PE=4 SV=1) HSP 1 Score: 303.1 bits (775), Expect = 7.1e-79 Identity = 143/171 (83.63%), Postives = 154/171 (90.06%), Query Frame = 0
BLAST of MS019590 vs. TAIR 10
Match: AT3G09925.1 (Pollen Ole e 1 allergen and extensin family protein ) HSP 1 Score: 177.6 bits (449), Expect = 8.7e-45 Identity = 84/163 (51.53%), Postives = 119/163 (73.01%), Query Frame = 0
BLAST of MS019590 vs. TAIR 10
Match: AT5G15780.1 (Pollen Ole e 1 allergen and extensin family protein ) HSP 1 Score: 49.7 bits (117), Expect = 2.7e-06 Identity = 29/85 (34.12%), Postives = 42/85 (49.41%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Bitter gourd (TR) v1
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
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