MS019564 (gene) Bitter gourd (TR) v1

Overview


Name	MS019564
Type	gene
Organism	Momordica charantia cv. TR (Bitter gourd (TR) v1)
Description	Ribosome production factor 2 homolog
Location	scaffold729: 588752 .. 590694 (+)
RNA-Seq Expression	MS019564
Synteny	MS019564

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGTTGAAAGTTAGAACTCCCAAAAATGGAAAAGTTAAACGAGAGCTGGAGAAACGCGCTCCCAAACTTGTAAGTTCTTCCATTACCGAGTTTGTTTGTAGGGTAGTCTAGAGTTTCGGGTGAATGACTAAAAGCATGTTAAAGAAGTTTGTATGACTTATTAATTGTTTTTTTTTCCTGTGTTGTTGGATTGGGTTATGGATTTGCTCCGCAGGTAGAAACGGGGAAGAAGACGCTGATACTTCATGGTACAAAAACGAGCAGCGTGCTGAATGCAGTATTGACGGAGATTTATCACCTGAAGAAAGAAAGCGCTGTCAAGTATTCTCGTAAGAATGATGGAATTAAACCATTTGAAAGTGGCGGCGATGCATCTTTGGAATTTTTCTCTCTGAAAACTGATTGCAGCCTCATCGTGGTTCGTACAATTTGTGCTTAATTTTCTTTGAACTATATTTGCTTAGTATAGTAGACGGTATTCTAATAGGCATCTTAATCAATTTATTTAGCTTATTGTCTAGGAGTTCTGCAGTGAATGCTTTTTTTTTTGTATTTTATTTTACATTTCAGTTTTGCATAGGAAGCTGGTTTCTTTGTTCTCTTCATCACAAATGAAGAGCTATTTGATCTAGAATTAGTTCTAGCTGCGTAGAATTTCCTTTTAGATTAATTTTTGTTGGGGTGAATGCTTCTAGTTTTTCCCTAATTAAACATCTCAAATGATCGATGAACTTAGCAGTTCTCAAATGGATGAACCTTTGTGAAAAAGTATAACCATGATGTGCTTTTTCTTTGGGCAAGGGTACACAAAGAATTTAGGGAACTTCAGTTTAGGAGCCATCCTATTTATGAATAGGCAAATCTCTGTTTGTATGAGTAAAAATTTTGCAACCTTTTTCCTCTTAATGAGAACATGTACATTATTTTGTTCAATCTATGTCAAGGGGTCAAAATACTCCTCTTCTTGCTTTCTTGTTTTGAGTTCTCTGTTGATGTATTTATTGCACCTCTTTGCAGTATGGTTCTCACTCAAAGAAGCGACCCGATAACCTTGTCATAGGGAGAACCTATGATCACCACATCTATGACCTTATCGAGGTTGGGATTGAAAATTTCAAGTCAATGCATTCCTTCACATACGATAAGAAACTAGCTCCAAAAGTGGGGTCGAAGCCTTTCATCACCTTCATTGGTGAAGGATTTGAGAGCGTAGAAGAGCTGAAGCATTTAAAGGAAGTGTTGCTTGATCTATTTAGAGGAGAGGTAAAAACCCTTATGCTTTGACTGACTTGAGTGAATGGTCAGATATAAAGATATGTATGGTTTTTGCAGGTTGTAGAGAATTTAAATCTTGCCGGATTGGACCGTGTATATGTATGTACAGCCATCTCACCAAATAAAGTATTTCTCACTCATTGTGCATTGCGATTGAAGAAGTCAGGTACACTAGTCCCAAGAATGGAACTAGTTGAAGTCGGTCCCTCAATGGATATGGTAGTTCGCCGCCACCGACTTCCTAGTGATGGCCTAAGAAAGGAAGCCATGAAAACAGCCAAGGATCAGGCCAAGAAGAAGGTCTAATGGCTATCTTTTTAGATAAATGCACTTCATTTGTGTCTACTAAGTTGTTTGTCTAATCTTGATGTTTATTTCTTCCAGGAGAAAAATGTCAGCGTGGATGCAATTCAAGGCAAGATTGGAAGGATATATATTCCTGATCAGAAGGTATGCACATCTCTCTATCTCTTTCTGTACTTGTGTTCTCTTCACTCCTTTTGCTATGTCGGTCATTTGACTAGTTTTGATACTCTTTTCTTGCCTCATAGGTTGGAGAAATGGCTATACCTAACAAATCGAAAGGAGTGAAGAGAGAACGCCGTGAAGCGAAAATGAAAAATAGCACTGATGGGCCAGCACCTAAAAAATCAAAAGAAGATTCAGAA

mRNA sequence

ATGTTGAAAGTTAGAACTCCCAAAAATGGAAAAGTTAAACGAGAGCTGGAGAAACGCGCTCCCAAACTTGTAGAAACGGGGAAGAAGACGCTGATACTTCATGGTACAAAAACGAGCAGCGTGCTGAATGCAGTATTGACGGAGATTTATCACCTGAAGAAAGAAAGCGCTGTCAAGTATTCTCGTAAGAATGATGGAATTAAACCATTTGAAAGTGGCGGCGATGCATCTTTGGAATTTTTCTCTCTGAAAACTGATTGCAGCCTCATCGTGTATGGTTCTCACTCAAAGAAGCGACCCGATAACCTTGTCATAGGGAGAACCTATGATCACCACATCTATGACCTTATCGAGGTTGGGATTGAAAATTTCAAGTCAATGCATTCCTTCACATACGATAAGAAACTAGCTCCAAAAGTGGGGTCGAAGCCTTTCATCACCTTCATTGGTGAAGGATTTGAGAGCGTAGAAGAGCTGAAGCATTTAAAGGAAGTGTTGCTTGATCTATTTAGAGGAGAGGTTGTAGAGAATTTAAATCTTGCCGGATTGGACCGTGTATATGTATGTACAGCCATCTCACCAAATAAAGTATTTCTCACTCATTGTGCATTGCGATTGAAGAAGTCAGGTACACTAGTCCCAAGAATGGAACTAGTTGAAGTCGGTCCCTCAATGGATATGGTAGTTCGCCGCCACCGACTTCCTAGTGATGGCCTAAGAAAGGAAGCCATGAAAACAGCCAAGGATCAGGCCAAGAAGAAGGAGAAAAATGTCAGCGTGGATGCAATTCAAGGCAAGATTGGAAGGATATATATTCCTGATCAGAAGGTTGGAGAAATGGCTATACCTAACAAATCGAAAGGAGTGAAGAGAGAACGCCGTGAAGCGAAAATGAAAAATAGCACTGATGGGCCAGCACCTAAAAAATCAAAAGAAGATTCAGAA

Coding sequence (CDS)

ATGTTGAAAGTTAGAACTCCCAAAAATGGAAAAGTTAAACGAGAGCTGGAGAAACGCGCTCCCAAACTTGTAGAAACGGGGAAGAAGACGCTGATACTTCATGGTACAAAAACGAGCAGCGTGCTGAATGCAGTATTGACGGAGATTTATCACCTGAAGAAAGAAAGCGCTGTCAAGTATTCTCGTAAGAATGATGGAATTAAACCATTTGAAAGTGGCGGCGATGCATCTTTGGAATTTTTCTCTCTGAAAACTGATTGCAGCCTCATCGTGTATGGTTCTCACTCAAAGAAGCGACCCGATAACCTTGTCATAGGGAGAACCTATGATCACCACATCTATGACCTTATCGAGGTTGGGATTGAAAATTTCAAGTCAATGCATTCCTTCACATACGATAAGAAACTAGCTCCAAAAGTGGGGTCGAAGCCTTTCATCACCTTCATTGGTGAAGGATTTGAGAGCGTAGAAGAGCTGAAGCATTTAAAGGAAGTGTTGCTTGATCTATTTAGAGGAGAGGTTGTAGAGAATTTAAATCTTGCCGGATTGGACCGTGTATATGTATGTACAGCCATCTCACCAAATAAAGTATTTCTCACTCATTGTGCATTGCGATTGAAGAAGTCAGGTACACTAGTCCCAAGAATGGAACTAGTTGAAGTCGGTCCCTCAATGGATATGGTAGTTCGCCGCCACCGACTTCCTAGTGATGGCCTAAGAAAGGAAGCCATGAAAACAGCCAAGGATCAGGCCAAGAAGAAGGAGAAAAATGTCAGCGTGGATGCAATTCAAGGCAAGATTGGAAGGATATATATTCCTGATCAGAAGGTTGGAGAAATGGCTATACCTAACAAATCGAAAGGAGTGAAGAGAGAACGCCGTGAAGCGAAAATGAAAAATAGCACTGATGGGCCAGCACCTAAAAAATCAAAAGAAGATTCAGAA

Protein sequence

MLKVRTPKNGKVKRELEKRAPKLVETGKKTLILHGTKTSSVLNAVLTEIYHLKKESAVKYSRKNDGIKPFESGGDASLEFFSLKTDCSLIVYGSHSKKRPDNLVIGRTYDHHIYDLIEVGIENFKSMHSFTYDKKLAPKVGSKPFITFIGEGFESVEELKHLKEVLLDLFRGEVVENLNLAGLDRVYVCTAISPNKVFLTHCALRLKKSGTLVPRMELVEVGPSMDMVVRRHRLPSDGLRKEAMKTAKDQAKKKEKNVSVDAIQGKIGRIYIPDQKVGEMAIPNKSKGVKRERREAKMKNSTDGPAPKKSKEDSE

Homology

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BLAST of MS019564 vs. NCBI nr
Match: XP_022144774.1 (ribosome production factor 2 homolog [Momordica charantia] >XP_022144775.1 ribosome production factor 2 homolog [Momordica charantia])

HSP 1 Score: 608.2 bits (1567), Expect = 4.0e-170
Identity = 313/315 (99.37%), Postives = 313/315 (99.37%), Query Frame = 0


Query: 1   MLKVRTPKNGKVKRELEKRAPKLVETGKKTLILHGTKTSSVLNAVLTEIYHLKKESAVKY 60
           MLKVRTPKNGKVKRELEKRAPKLVETGKKTLILHGTKTSSVLNAVLTEIYHLKKESAVKY
Sbjct: 1   MLKVRTPKNGKVKRELEKRAPKLVETGKKTLILHGTKTSSVLNAVLTEIYHLKKESAVKY 60

Query: 61  SRKNDGIKPFESGGDASLEFFSLKTDCSLIVYGSHSKKRPDNLVIGRTYDHHIYDLIEVG 120
           SRKNDGIKPFESGGDASLEFFSLKTDCSLIVYGSHSKKRPDNLVIGRTYDHHIYDLIEVG
Sbjct: 61  SRKNDGIKPFESGGDASLEFFSLKTDCSLIVYGSHSKKRPDNLVIGRTYDHHIYDLIEVG 120

Query: 121 IENFKSMHSFTYDKKLAPKVGSKPFITFIGEGFESVEELKHLKEVLLDLFRGEVVENLNL 180
           IENFKSMHSF YDKKLAPKVGSKPFITFIGEGFESVEELKHLKEVLLDLFRGEVVENLNL
Sbjct: 121 IENFKSMHSFAYDKKLAPKVGSKPFITFIGEGFESVEELKHLKEVLLDLFRGEVVENLNL 180

Query: 181 AGLDRVYVCTAISPNKVFLTHCALRLKKSGTLVPRMELVEVGPSMDMVVRRHRLPSDGLR 240
           AGLDRVYVCTAISPNKVFLTHCALRLKKSGTLVPRMELVEVGPSMDMVVRRHRLPSDGLR
Sbjct: 181 AGLDRVYVCTAISPNKVFLTHCALRLKKSGTLVPRMELVEVGPSMDMVVRRHRLPSDGLR 240

Query: 241 KEAMKTAKDQAKKKEKNVSVDAIQGKIGRIYIPDQKVGEMAIPNKSKGVKRERREAKMKN 300
           KEAMKTAKDQAKKKEKNVSVDAIQGKIGRIYIPDQKVGEMAIPNKSKGVK ERREAKMKN
Sbjct: 241 KEAMKTAKDQAKKKEKNVSVDAIQGKIGRIYIPDQKVGEMAIPNKSKGVKXERREAKMKN 300

Query: 301 STDGPAPKKSKEDSE 316
           STDGPAPKKSKEDSE
Sbjct: 301 STDGPAPKKSKEDSE 315

[Close]

BLAST of MS019564 vs. NCBI nr
Match: KAG6580669.1 (Ribosome production factor 2-like protein, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 580.9 bits (1496), Expect = 6.8e-162
Identity = 294/315 (93.33%), Postives = 308/315 (97.78%), Query Frame = 0


Query: 1   MLKVRTPKNGKVKRELEKRAPKLVETGKKTLILHGTKTSSVLNAVLTEIYHLKKESAVKY 60
           MLKVRTPKNGKV+RELEKRAPK+VETGKKTLILHGTKTS VLNAVLTE+YHLKKES+VKY
Sbjct: 1   MLKVRTPKNGKVRRELEKRAPKIVETGKKTLILHGTKTSGVLNAVLTELYHLKKESSVKY 60

Query: 61  SRKNDGIKPFESGGDASLEFFSLKTDCSLIVYGSHSKKRPDNLVIGRTYDHHIYDLIEVG 120
           SRKNDGIKPFESGGD+SLEFFSLKTDCS+IVYGSHSKKRPDNLVIGRTYDH IYDL+EVG
Sbjct: 61  SRKNDGIKPFESGGDSSLEFFSLKTDCSIIVYGSHSKKRPDNLVIGRTYDHKIYDLVEVG 120

Query: 121 IENFKSMHSFTYDKKLAPKVGSKPFITFIGEGFESVEELKHLKEVLLDLFRGEVVENLNL 180
           IENFKSMHSFTYDKKL+P+VGSKPFITFIGEGFE+VEELKHLKEVLLDLFRGEVVENLNL
Sbjct: 121 IENFKSMHSFTYDKKLSPRVGSKPFITFIGEGFENVEELKHLKEVLLDLFRGEVVENLNL 180

Query: 181 AGLDRVYVCTAISPNKVFLTHCALRLKKSGTLVPRMELVEVGPSMDMVVRRHRLPSDGLR 240
           AGLDRVYVCTAISPNKVFLTHCALRLKKSG++VPRMELVEVGPSMDMVVRRHRLPSDGLR
Sbjct: 181 AGLDRVYVCTAISPNKVFLTHCALRLKKSGSVVPRMELVEVGPSMDMVVRRHRLPSDGLR 240

Query: 241 KEAMKTAKDQAKKKEKNVSVDAIQGKIGRIYIPDQKVGEMAIPNKSKGVKRERREAKMKN 300
           KEAMKTAKDQAKKKEKNVS DAIQGKIGRIYIPDQKVG+MAIP+KSKGVKRERREAKMKN
Sbjct: 241 KEAMKTAKDQAKKKEKNVSQDAIQGKIGRIYIPDQKVGDMAIPDKSKGVKRERREAKMKN 300

Query: 301 STDGPAPKKSKEDSE 316
             DGPA KK KEDSE
Sbjct: 301 KDDGPASKKPKEDSE 315

[Close]

BLAST of MS019564 vs. NCBI nr
Match: XP_022934916.1 (ribosome production factor 2 homolog [Cucurbita moschata] >XP_023527626.1 ribosome production factor 2 homolog [Cucurbita pepo subsp. pepo])

HSP 1 Score: 580.5 bits (1495), Expect = 8.9e-162
Identity = 293/315 (93.02%), Postives = 308/315 (97.78%), Query Frame = 0


Query: 1   MLKVRTPKNGKVKRELEKRAPKLVETGKKTLILHGTKTSSVLNAVLTEIYHLKKESAVKY 60
           MLK+RTPKNGKV+RELEKRAPK+VETGKKTLILHGTKTS VLNAVLTE+YHLKKES+VKY
Sbjct: 1   MLKIRTPKNGKVRRELEKRAPKIVETGKKTLILHGTKTSGVLNAVLTELYHLKKESSVKY 60

Query: 61  SRKNDGIKPFESGGDASLEFFSLKTDCSLIVYGSHSKKRPDNLVIGRTYDHHIYDLIEVG 120
           SRKNDGIKPFESGGD+SLEFFSLKTDCS+IVYGSHSKKRPDNLVIGRTYDH IYDL+EVG
Sbjct: 61  SRKNDGIKPFESGGDSSLEFFSLKTDCSIIVYGSHSKKRPDNLVIGRTYDHKIYDLVEVG 120

Query: 121 IENFKSMHSFTYDKKLAPKVGSKPFITFIGEGFESVEELKHLKEVLLDLFRGEVVENLNL 180
           IENFKSMHSFTYDKKL+P+VGSKPFITFIGEGFE+VEELKHLKEVLLDLFRGEVVENLNL
Sbjct: 121 IENFKSMHSFTYDKKLSPRVGSKPFITFIGEGFENVEELKHLKEVLLDLFRGEVVENLNL 180

Query: 181 AGLDRVYVCTAISPNKVFLTHCALRLKKSGTLVPRMELVEVGPSMDMVVRRHRLPSDGLR 240
           AGLDRVYVCTAISPNKVFLTHCALRLKKSG++VPRMELVEVGPSMDMVVRRHRLPSDGLR
Sbjct: 181 AGLDRVYVCTAISPNKVFLTHCALRLKKSGSVVPRMELVEVGPSMDMVVRRHRLPSDGLR 240

Query: 241 KEAMKTAKDQAKKKEKNVSVDAIQGKIGRIYIPDQKVGEMAIPNKSKGVKRERREAKMKN 300
           KEAMKTAKDQAKKKEKNVS DAIQGKIGRIYIPDQKVG+MAIP+KSKGVKRERREAKMKN
Sbjct: 241 KEAMKTAKDQAKKKEKNVSQDAIQGKIGRIYIPDQKVGDMAIPDKSKGVKRERREAKMKN 300

Query: 301 STDGPAPKKSKEDSE 316
             DGPA KK KEDSE
Sbjct: 301 KDDGPASKKPKEDSE 315

[Close]

BLAST of MS019564 vs. NCBI nr
Match: XP_022983029.1 (ribosome production factor 2 homolog [Cucurbita maxima])

HSP 1 Score: 579.3 bits (1492), Expect = 2.0e-161
Identity = 294/315 (93.33%), Postives = 308/315 (97.78%), Query Frame = 0


Query: 1   MLKVRTPKNGKVKRELEKRAPKLVETGKKTLILHGTKTSSVLNAVLTEIYHLKKESAVKY 60
           MLKVRTPKNGKV+RELEKRAPK+VETGKKTLILHGTKTS VLNAVLTE+YHLKKES+VKY
Sbjct: 1   MLKVRTPKNGKVRRELEKRAPKIVETGKKTLILHGTKTSGVLNAVLTELYHLKKESSVKY 60

Query: 61  SRKNDGIKPFESGGDASLEFFSLKTDCSLIVYGSHSKKRPDNLVIGRTYDHHIYDLIEVG 120
           SRKNDGIKPFESGGD+SLEFFSLKTDCS+IVYGSHSKKRPDNLVIGRTYDH IYDLIEVG
Sbjct: 61  SRKNDGIKPFESGGDSSLEFFSLKTDCSIIVYGSHSKKRPDNLVIGRTYDHKIYDLIEVG 120

Query: 121 IENFKSMHSFTYDKKLAPKVGSKPFITFIGEGFESVEELKHLKEVLLDLFRGEVVENLNL 180
           IENFKSMHSFTYDKKL+P+VGSKPFITFIGEGFE+VEELKHLKEVLLDLFRGEVVENLNL
Sbjct: 121 IENFKSMHSFTYDKKLSPRVGSKPFITFIGEGFENVEELKHLKEVLLDLFRGEVVENLNL 180

Query: 181 AGLDRVYVCTAISPNKVFLTHCALRLKKSGTLVPRMELVEVGPSMDMVVRRHRLPSDGLR 240
           AGLDRVYVCTAISPNKVFLTHCALRLKKSG++VPRMELVEVGPSMDMVVRRHRLPSDGLR
Sbjct: 181 AGLDRVYVCTAISPNKVFLTHCALRLKKSGSVVPRMELVEVGPSMDMVVRRHRLPSDGLR 240

Query: 241 KEAMKTAKDQAKKKEKNVSVDAIQGKIGRIYIPDQKVGEMAIPNKSKGVKRERREAKMKN 300
           KEAMKTAKDQAKKKEKNVS DAIQGKIGRIYIPDQKVG+MAIP+KSKGVKRERREAKMK+
Sbjct: 241 KEAMKTAKDQAKKKEKNVSQDAIQGKIGRIYIPDQKVGDMAIPDKSKGVKRERREAKMKS 300

Query: 301 STDGPAPKKSKEDSE 316
             DGPA KK KEDSE
Sbjct: 301 KDDGPASKKPKEDSE 315

[Close]

BLAST of MS019564 vs. NCBI nr
Match: KAG7017424.1 (Ribosome production factor 2-like protein [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 579.3 bits (1492), Expect = 2.0e-161
Identity = 292/315 (92.70%), Postives = 308/315 (97.78%), Query Frame = 0


Query: 1   MLKVRTPKNGKVKRELEKRAPKLVETGKKTLILHGTKTSSVLNAVLTEIYHLKKESAVKY 60
           MLK+RTPKNGKV+RELEKRAPK+VETGKKTLILHGTKTS VLNAVLTE+YHLKKES+VKY
Sbjct: 1   MLKIRTPKNGKVRRELEKRAPKIVETGKKTLILHGTKTSGVLNAVLTELYHLKKESSVKY 60

Query: 61  SRKNDGIKPFESGGDASLEFFSLKTDCSLIVYGSHSKKRPDNLVIGRTYDHHIYDLIEVG 120
           SRKNDGIKPFESGGD+SLEFFSLKTDCS+IVYGSHSKKRPDNLVIGRTYDH IYDL+EVG
Sbjct: 61  SRKNDGIKPFESGGDSSLEFFSLKTDCSIIVYGSHSKKRPDNLVIGRTYDHKIYDLVEVG 120

Query: 121 IENFKSMHSFTYDKKLAPKVGSKPFITFIGEGFESVEELKHLKEVLLDLFRGEVVENLNL 180
           IENFKSMHSFTYDKKL+P+VGSKPFITFIGEGFE+VEELKHLKEVLLDLFRGEVVENLNL
Sbjct: 121 IENFKSMHSFTYDKKLSPRVGSKPFITFIGEGFENVEELKHLKEVLLDLFRGEVVENLNL 180

Query: 181 AGLDRVYVCTAISPNKVFLTHCALRLKKSGTLVPRMELVEVGPSMDMVVRRHRLPSDGLR 240
           AGLDRVYVCTAISPNKVFLTHCALRLKKSG++VPRMELVEVGPSMDMVVRRHRLPSDGLR
Sbjct: 181 AGLDRVYVCTAISPNKVFLTHCALRLKKSGSVVPRMELVEVGPSMDMVVRRHRLPSDGLR 240

Query: 241 KEAMKTAKDQAKKKEKNVSVDAIQGKIGRIYIPDQKVGEMAIPNKSKGVKRERREAKMKN 300
           KEAMKTAKDQAKKKEKNVS DAIQGKIGRIYIPDQKVG+MA+P+KSKGVKRERREAKMKN
Sbjct: 241 KEAMKTAKDQAKKKEKNVSQDAIQGKIGRIYIPDQKVGDMAMPDKSKGVKRERREAKMKN 300

Query: 301 STDGPAPKKSKEDSE 316
             DGPA KK KEDSE
Sbjct: 301 KDDGPASKKPKEDSE 315

[Close]

BLAST of MS019564 vs. ExPASy Swiss-Prot
Match: Q9LUG5 (Ribosome production factor 2 homolog OS=Arabidopsis thaliana OX=3702 GN=At3g23620 PE=2 SV=1)

HSP 1 Score: 456.4 bits (1173), Expect = 2.5e-127
Identity = 226/315 (71.75%), Postives = 272/315 (86.35%), Query Frame = 0


Query: 1   MLKVRTPKNGKVKRELEKRAPKLVETGKKTLILHGTKTSSVLNAVLTEIYHLKKESAVKY 60
           M+++RTPK GK KR LE RAPKLVETGKKTLILHGTKTS+ L++V+TE+Y LKK  A++Y
Sbjct: 1   MMEIRTPKTGKAKRVLESRAPKLVETGKKTLILHGTKTSATLSSVMTELYRLKKGGAIRY 60

Query: 61  SRKNDGIKPFESGGDASLEFFSLKTDCSLIVYGSHSKKRPDNLVIGRTYDHHIYDLIEVG 120
           SR+N+ I+PFESGG+ SLEFFS KTDCS+ VYGSH+KKRPDNLV+GR YDH +YDLIEVG
Sbjct: 61  SRRNENIRPFESGGETSLEFFSQKTDCSIFVYGSHTKKRPDNLVLGRMYDHQVYDLIEVG 120

Query: 121 IENFKSMHSFTYDKKLAPKVGSKPFITFIGEGFESVEELKHLKEVLLDLFRGEVVENLNL 180
           IENFKS+ +F+YDKK AP  G+KPFI FIGEGFE+V ELKHLKEVL DLFRGEVV+NLNL
Sbjct: 121 IENFKSLRAFSYDKKFAPHEGTKPFICFIGEGFENVSELKHLKEVLTDLFRGEVVDNLNL 180

Query: 181 AGLDRVYVCTAISPNKVFLTHCALRLKKSGTLVPRMELVEVGPSMDMVVRRHRLPSDGLR 240
            GLDR YVC+AISP KVFLTHCAL+LKKSG++VPRMELVEVGPSMD+V+RR+RLP+D L 
Sbjct: 181 TGLDRAYVCSAISPTKVFLTHCALKLKKSGSIVPRMELVEVGPSMDLVIRRNRLPNDSLM 240

Query: 241 KEAMKTAKDQAKKKEKNVSVDAIQGKIGRIYIPDQKVGEMAIPNKSKGVKRERREAKMKN 300
           KEAM+T+KD+ KKKEKNV  DA+ GK G+IY+PDQK+ EM + +KSKG KRER++AK+K+
Sbjct: 241 KEAMRTSKDKPKKKEKNVDQDAVLGKTGKIYMPDQKLKEMKLFDKSKGSKRERKDAKLKH 300

Query: 301 STDGPAPKKSKEDSE 316
             +  A KK K  SE
Sbjct: 301 KEETVA-KKMKVSSE 314

[Close]

BLAST of MS019564 vs. ExPASy Swiss-Prot
Match: Q9AWM9 (Ribosome production factor 2 homolog OS=Oryza sativa subsp. japonica OX=39947 GN=Os01g0513800 PE=2 SV=1)

HSP 1 Score: 445.3 bits (1144), Expect = 5.8e-124
Identity = 222/309 (71.84%), Postives = 268/309 (86.73%), Query Frame = 0


Query: 4   VRTPKNGKVKRELEKRAPKLVETGKKTLILHGTKTSSVLNAVLTEIYHLKKESAVKYSRK 63
           +R P++ + KREL K APKLVETGKKTLILHGTKTS+VLN+VL +++HLK+++AVKYS+K
Sbjct: 5   IRVPRSQRAKRELLKHAPKLVETGKKTLILHGTKTSAVLNSVLADLFHLKRDNAVKYSKK 64

Query: 64  NDGIKPFESGGDASLEFFSLKTDCSLIVYGSHSKKRPDNLVIGRTYDHHIYDLIEVGIEN 123
           ND I+PFESGG+ SLEFFSLKTDCSLIVYGSHSKKRP+NLV+GRTYDHHIYDL+EVG+EN
Sbjct: 65  NDNIRPFESGGETSLEFFSLKTDCSLIVYGSHSKKRPNNLVLGRTYDHHIYDLVEVGVEN 124

Query: 124 FKSMHSFTYDKKLAPKVGSKPFITFIGEGFESVEELKHLKEVLLDLFRGEVVENLNLAGL 183
           +KS+ S+ YDKKLAPK+GSKPF  FIGE FESVEELKHLKEVLLDLF+GEVVENLNLAG+
Sbjct: 125 YKSIESYVYDKKLAPKLGSKPFFAFIGEHFESVEELKHLKEVLLDLFKGEVVENLNLAGV 184

Query: 184 DRVYVCTAISPNKVFLTHCALRLKKSGTLVPRMELVEVGPSMDMVVRRHRLPSDGLRKEA 243
           DRV+VCTAISP  V++ HCALRLK+SGT +PR+ELVEVGPSMD+VVRRHR P + L+KEA
Sbjct: 185 DRVFVCTAISPTTVYMMHCALRLKRSGTSIPRIELVEVGPSMDLVVRRHRYPVESLKKEA 244

Query: 244 MKTAKDQAKKKEKNVSVDAIQGKIGRIYIPDQKVGEMAIPNKSKGVKRERREAKMKNSTD 303
           MKTA D AKK  KNV+ D + GK+G++YIPDQ++ +M++ N  KG+KRERREAK KN   
Sbjct: 245 MKTA-DHAKKM-KNVTKDPVHGKLGKVYIPDQQIAKMSLSNDVKGLKRERREAK-KNKDH 304

Query: 304 GPAPKKSKE 313
               K + E
Sbjct: 305 SKKQKINPE 310

[Close]

BLAST of MS019564 vs. ExPASy Swiss-Prot
Match: Q9H7B2 (Ribosome production factor 2 homolog OS=Homo sapiens OX=9606 GN=RPF2 PE=1 SV=2)

HSP 1 Score: 224.9 bits (572), Expect = 1.2e-57
Identity = 131/293 (44.71%), Postives = 183/293 (62.46%), Query Frame = 0


Query: 3   KVRTPKNGKVKRELEKRAPKLVETGKKTLILHGTKTSSVLNAVLTEIYHLKKESAVKYSR 62
           +V  PK  + KR LEKR PKL E  K  +++ G   ++ +  VL ++Y LKK   V Y +
Sbjct: 6   RVVKPKTKRAKRFLEKREPKLNENIKNAMLIKGGNANATVTKVLKDVYALKKPYGVLYKK 65

Query: 63  KNDGIKPFESGGDASLEFFSLKTDCSLIVYGSHSKKRPDNLVIGRTYDHHIYDLIEVGIE 122
           KN   +PFE     SLEFFS K+DCSL ++GSH+KKRP+NLVIGR YD+H+ D+IE+GIE
Sbjct: 66  KNI-TRPFED--QTSLEFFSKKSDCSLFMFGSHNKKRPNNLVIGRMYDYHVLDMIELGIE 125

Query: 123 NFKSMHSFTYDKKLAPKVGSKPFITFIGEGFESVEELKHLKEVLLDLFRGEVVENLNLAG 182
           NF S+      K   P+ G+KP + F G+ F+  E+ + LK +L+D FRG  V N+ LAG
Sbjct: 126 NFVSLKDIKNSK--CPE-GTKPMLIFAGDDFDVTEDYRRLKSLLIDFFRGPTVSNIRLAG 185

Query: 183 LDRVYVCTAISPNKVFLTHCALRLKKSGTLVPRMELVEVGPSMDMVVRRHRLPSDGLRKE 242
           L+ V   TA++  K++     L LKKSG   PR+EL E+GPS+D+V+RR  L SD L K 
Sbjct: 186 LEYVLHFTALN-GKIYFRSYKLLLKKSGCRTPRIELEEMGPSLDLVLRRTHLASDDLYKL 245

Query: 243 AMKTAKDQAKKKEKNVSVDAIQGKIGRIYIPDQKVGEMAIPNKSKGVKRERRE 296
           +MK  K    KK+KN+S D      GRI++  Q + ++    K KG+K+   E
Sbjct: 246 SMKMPKALKPKKKKNISHDTFGTTYGRIHMQKQDLSKLQ-TRKMKGLKKRPAE 290

[Close]

BLAST of MS019564 vs. ExPASy Swiss-Prot
Match: Q2YDN6 (Ribosome production factor 2 homolog OS=Bos taurus OX=9913 GN=RPF2 PE=2 SV=1)

HSP 1 Score: 224.6 bits (571), Expect = 1.6e-57
Identity = 131/298 (43.96%), Postives = 185/298 (62.08%), Query Frame = 0


Query: 3   KVRTPKNGKVKRELEKRAPKLVETGKKTLILHGTKTSSVLNAVLTEIYHLKKESAVKYSR 62
           +V  PK  + KR LEKR PKL E  K  +++ G   +S +  VL ++Y LKK   + Y +
Sbjct: 6   RVVKPKTKRAKRFLEKREPKLSENIKNAMLIKGGNANSTVTQVLRDVYALKKPYGILYKK 65

Query: 63  KNDGIKPFESGGDASLEFFSLKTDCSLIVYGSHSKKRPDNLVIGRTYDHHIYDLIEVGIE 122
           KN   +PFE     SLEFFS K+DCSL ++GSH+KKRP+NLVIGR YD+H+ D+IE+GIE
Sbjct: 66  KNI-TRPFED--QTSLEFFSKKSDCSLFMFGSHNKKRPNNLVIGRMYDYHVLDIIELGIE 125

Query: 123 NFKSMHSFTYDKKLAPKVGSKPFITFIGEGFESVEELKHLKEVLLDLFRGEVVENLNLAG 182
            F S+      K   P+ G+KP + F G+ F+  E+ + LK +L+D FRG  V N+ LAG
Sbjct: 126 KFVSLKDIKNSK--CPE-GTKPMLIFAGDDFDVTEDYRRLKSLLIDFFRGPTVSNIRLAG 185

Query: 183 LDRVYVCTAISPNKVFLTHCALRLKKSGTLVPRMELVEVGPSMDMVVRRHRLPSDGLRKE 242
           L+ V   TA++  K++     L LKKSG   PR+EL E+GPS+D+V+RR  L SD L K 
Sbjct: 186 LEYVLHFTALN-GKIYFRSYKLLLKKSGCRTPRIELEEMGPSLDLVLRRTHLASDDLYKL 245

Query: 243 AMKTAKDQAKKKEKNVSVDAIQGKIGRIYIPDQKVGEMAIPNKSKGVKRERREAKMKN 301
           +MK  K    KK+KN+S D      GRI++  Q + ++    K KG+K+   E K ++
Sbjct: 246 SMKMPKALKPKKKKNISHDTFGTTYGRIHMQKQDLSKLQ-TRKMKGLKKRPAERKAED 295

[Close]

BLAST of MS019564 vs. ExPASy Swiss-Prot
Match: Q9JJ80 (Ribosome production factor 2 homolog OS=Mus musculus OX=10090 GN=Rpf2 PE=2 SV=2)

HSP 1 Score: 223.8 bits (569), Expect = 2.8e-57
Identity = 138/309 (44.66%), Postives = 187/309 (60.52%), Query Frame = 0


Query: 3   KVRTPKNGKVKRELEKRAPKLVETGKKTLILHGTKTSSVLNAVLTEIYHLKKESAVKYSR 62
           KV  PK  + KR LEKR PKL E  K  +++ G   ++ +  VL ++Y LKK   V Y +
Sbjct: 6   KVLKPKTKRAKRFLEKREPKLTENIKNAMLIKGGNANATVTQVLRDMYALKKPYGVLYKK 65

Query: 63  KNDGIKPFESGGDASLEFFSLKTDCSLIVYGSHSKKRPDNLVIGRTYDHHIYDLIEVGIE 122
           KN   +PFE     SLEFFS K+DCSL ++GSH+KKRP+NLVIGR YD+H+ D+IE+GIE
Sbjct: 66  KNI-TRPFED--QTSLEFFSKKSDCSLFMFGSHNKKRPNNLVIGRMYDYHVLDMIELGIE 125

Query: 123 NFKSMHSFTYDKKLAPKVGSKPFITFIGEGFESVEELKHLKEVLLDLFRGEVVENLNLAG 182
            F S+      K   P+ G+KP + F G+ F+  E+ + LK +L+D FRG  V N+ LAG
Sbjct: 126 KFVSLKDIKTSK--CPE-GTKPMLIFAGDDFDVTEDFRRLKNLLIDFFRGPTVSNVRLAG 185

Query: 183 LDRVYVCTAISPNKVFLTHCALRLKKSGTLVPRMELVEVGPSMDMVVRRHRLPSDGLRKE 242
           L+ V   TA++  KV+     L LKKSG   PR+EL E+GPS+D+V+RR  L SD L K 
Sbjct: 186 LEYVLHFTALN-GKVYFRSYKLLLKKSGCRTPRIELEEMGPSLDLVMRRTHLASDDLYKL 245

Query: 243 AMKTAKDQAKKKEKNVSVDAIQGKIGRIYIPDQKVGEMAIPNKSKGVKRERREAKMKNST 302
           +MK  K    KK KN+S D      GRI++  Q + ++    K KG+K+   E    N  
Sbjct: 246 SMKVPKALKPKKRKNISQDTFGTTFGRIHMQKQDLSKLQ-TRKMKGLKKRPAE----NGV 301

Query: 303 DGPAPKKSK 312
           D    KKSK
Sbjct: 306 DDQG-KKSK 301

[Close]

BLAST of MS019564 vs. ExPASy TrEMBL
Match: A0A6J1CTA1 (Ribosome production factor 2 homolog OS=Momordica charantia OX=3673 GN=LOC111014381 PE=3 SV=1)

HSP 1 Score: 608.2 bits (1567), Expect = 1.9e-170
Identity = 313/315 (99.37%), Postives = 313/315 (99.37%), Query Frame = 0


Query: 1   MLKVRTPKNGKVKRELEKRAPKLVETGKKTLILHGTKTSSVLNAVLTEIYHLKKESAVKY 60
           MLKVRTPKNGKVKRELEKRAPKLVETGKKTLILHGTKTSSVLNAVLTEIYHLKKESAVKY
Sbjct: 1   MLKVRTPKNGKVKRELEKRAPKLVETGKKTLILHGTKTSSVLNAVLTEIYHLKKESAVKY 60

Query: 61  SRKNDGIKPFESGGDASLEFFSLKTDCSLIVYGSHSKKRPDNLVIGRTYDHHIYDLIEVG 120
           SRKNDGIKPFESGGDASLEFFSLKTDCSLIVYGSHSKKRPDNLVIGRTYDHHIYDLIEVG
Sbjct: 61  SRKNDGIKPFESGGDASLEFFSLKTDCSLIVYGSHSKKRPDNLVIGRTYDHHIYDLIEVG 120

Query: 121 IENFKSMHSFTYDKKLAPKVGSKPFITFIGEGFESVEELKHLKEVLLDLFRGEVVENLNL 180
           IENFKSMHSF YDKKLAPKVGSKPFITFIGEGFESVEELKHLKEVLLDLFRGEVVENLNL
Sbjct: 121 IENFKSMHSFAYDKKLAPKVGSKPFITFIGEGFESVEELKHLKEVLLDLFRGEVVENLNL 180

Query: 181 AGLDRVYVCTAISPNKVFLTHCALRLKKSGTLVPRMELVEVGPSMDMVVRRHRLPSDGLR 240
           AGLDRVYVCTAISPNKVFLTHCALRLKKSGTLVPRMELVEVGPSMDMVVRRHRLPSDGLR
Sbjct: 181 AGLDRVYVCTAISPNKVFLTHCALRLKKSGTLVPRMELVEVGPSMDMVVRRHRLPSDGLR 240

Query: 241 KEAMKTAKDQAKKKEKNVSVDAIQGKIGRIYIPDQKVGEMAIPNKSKGVKRERREAKMKN 300
           KEAMKTAKDQAKKKEKNVSVDAIQGKIGRIYIPDQKVGEMAIPNKSKGVK ERREAKMKN
Sbjct: 241 KEAMKTAKDQAKKKEKNVSVDAIQGKIGRIYIPDQKVGEMAIPNKSKGVKXERREAKMKN 300

Query: 301 STDGPAPKKSKEDSE 316
           STDGPAPKKSKEDSE
Sbjct: 301 STDGPAPKKSKEDSE 315

[Close]

BLAST of MS019564 vs. ExPASy TrEMBL
Match: A0A6J1F357 (Ribosome production factor 2 homolog OS=Cucurbita moschata OX=3662 GN=LOC111441948 PE=3 SV=1)

HSP 1 Score: 580.5 bits (1495), Expect = 4.3e-162
Identity = 293/315 (93.02%), Postives = 308/315 (97.78%), Query Frame = 0


Query: 1   MLKVRTPKNGKVKRELEKRAPKLVETGKKTLILHGTKTSSVLNAVLTEIYHLKKESAVKY 60
           MLK+RTPKNGKV+RELEKRAPK+VETGKKTLILHGTKTS VLNAVLTE+YHLKKES+VKY
Sbjct: 1   MLKIRTPKNGKVRRELEKRAPKIVETGKKTLILHGTKTSGVLNAVLTELYHLKKESSVKY 60

Query: 61  SRKNDGIKPFESGGDASLEFFSLKTDCSLIVYGSHSKKRPDNLVIGRTYDHHIYDLIEVG 120
           SRKNDGIKPFESGGD+SLEFFSLKTDCS+IVYGSHSKKRPDNLVIGRTYDH IYDL+EVG
Sbjct: 61  SRKNDGIKPFESGGDSSLEFFSLKTDCSIIVYGSHSKKRPDNLVIGRTYDHKIYDLVEVG 120

Query: 121 IENFKSMHSFTYDKKLAPKVGSKPFITFIGEGFESVEELKHLKEVLLDLFRGEVVENLNL 180
           IENFKSMHSFTYDKKL+P+VGSKPFITFIGEGFE+VEELKHLKEVLLDLFRGEVVENLNL
Sbjct: 121 IENFKSMHSFTYDKKLSPRVGSKPFITFIGEGFENVEELKHLKEVLLDLFRGEVVENLNL 180

Query: 181 AGLDRVYVCTAISPNKVFLTHCALRLKKSGTLVPRMELVEVGPSMDMVVRRHRLPSDGLR 240
           AGLDRVYVCTAISPNKVFLTHCALRLKKSG++VPRMELVEVGPSMDMVVRRHRLPSDGLR
Sbjct: 181 AGLDRVYVCTAISPNKVFLTHCALRLKKSGSVVPRMELVEVGPSMDMVVRRHRLPSDGLR 240

Query: 241 KEAMKTAKDQAKKKEKNVSVDAIQGKIGRIYIPDQKVGEMAIPNKSKGVKRERREAKMKN 300
           KEAMKTAKDQAKKKEKNVS DAIQGKIGRIYIPDQKVG+MAIP+KSKGVKRERREAKMKN
Sbjct: 241 KEAMKTAKDQAKKKEKNVSQDAIQGKIGRIYIPDQKVGDMAIPDKSKGVKRERREAKMKN 300

Query: 301 STDGPAPKKSKEDSE 316
             DGPA KK KEDSE
Sbjct: 301 KDDGPASKKPKEDSE 315

[Close]

BLAST of MS019564 vs. ExPASy TrEMBL
Match: A0A6J1J655 (Ribosome production factor 2 homolog OS=Cucurbita maxima OX=3661 GN=LOC111481697 PE=3 SV=1)

HSP 1 Score: 579.3 bits (1492), Expect = 9.6e-162
Identity = 294/315 (93.33%), Postives = 308/315 (97.78%), Query Frame = 0


Query: 1   MLKVRTPKNGKVKRELEKRAPKLVETGKKTLILHGTKTSSVLNAVLTEIYHLKKESAVKY 60
           MLKVRTPKNGKV+RELEKRAPK+VETGKKTLILHGTKTS VLNAVLTE+YHLKKES+VKY
Sbjct: 1   MLKVRTPKNGKVRRELEKRAPKIVETGKKTLILHGTKTSGVLNAVLTELYHLKKESSVKY 60

Query: 61  SRKNDGIKPFESGGDASLEFFSLKTDCSLIVYGSHSKKRPDNLVIGRTYDHHIYDLIEVG 120
           SRKNDGIKPFESGGD+SLEFFSLKTDCS+IVYGSHSKKRPDNLVIGRTYDH IYDLIEVG
Sbjct: 61  SRKNDGIKPFESGGDSSLEFFSLKTDCSIIVYGSHSKKRPDNLVIGRTYDHKIYDLIEVG 120

Query: 121 IENFKSMHSFTYDKKLAPKVGSKPFITFIGEGFESVEELKHLKEVLLDLFRGEVVENLNL 180
           IENFKSMHSFTYDKKL+P+VGSKPFITFIGEGFE+VEELKHLKEVLLDLFRGEVVENLNL
Sbjct: 121 IENFKSMHSFTYDKKLSPRVGSKPFITFIGEGFENVEELKHLKEVLLDLFRGEVVENLNL 180

Query: 181 AGLDRVYVCTAISPNKVFLTHCALRLKKSGTLVPRMELVEVGPSMDMVVRRHRLPSDGLR 240
           AGLDRVYVCTAISPNKVFLTHCALRLKKSG++VPRMELVEVGPSMDMVVRRHRLPSDGLR
Sbjct: 181 AGLDRVYVCTAISPNKVFLTHCALRLKKSGSVVPRMELVEVGPSMDMVVRRHRLPSDGLR 240

Query: 241 KEAMKTAKDQAKKKEKNVSVDAIQGKIGRIYIPDQKVGEMAIPNKSKGVKRERREAKMKN 300
           KEAMKTAKDQAKKKEKNVS DAIQGKIGRIYIPDQKVG+MAIP+KSKGVKRERREAKMK+
Sbjct: 241 KEAMKTAKDQAKKKEKNVSQDAIQGKIGRIYIPDQKVGDMAIPDKSKGVKRERREAKMKS 300

Query: 301 STDGPAPKKSKEDSE 316
             DGPA KK KEDSE
Sbjct: 301 KDDGPASKKPKEDSE 315

[Close]

BLAST of MS019564 vs. ExPASy TrEMBL
Match: A0A6J1KZU6 (Ribosome production factor 2 homolog OS=Cucurbita maxima OX=3661 GN=LOC111498582 PE=3 SV=1)

HSP 1 Score: 568.9 bits (1465), Expect = 1.3e-158
Identity = 287/315 (91.11%), Postives = 305/315 (96.83%), Query Frame = 0


Query: 1   MLKVRTPKNGKVKRELEKRAPKLVETGKKTLILHGTKTSSVLNAVLTEIYHLKKESAVKY 60
           MLKVRTPKNGKVKRELEKRAPKLVETGKKTLILHGTKTS VLN VLTEIYHLKKESAVKY
Sbjct: 1   MLKVRTPKNGKVKRELEKRAPKLVETGKKTLILHGTKTSGVLNEVLTEIYHLKKESAVKY 60

Query: 61  SRKNDGIKPFESGGDASLEFFSLKTDCSLIVYGSHSKKRPDNLVIGRTYDHHIYDLIEVG 120
           SR+N+GIKPFE+GGD+SLEFFSLKTDCS+IVYGSHSKKRPDNLVI RTYDHHIYDLIEVG
Sbjct: 61  SRRNEGIKPFENGGDSSLEFFSLKTDCSIIVYGSHSKKRPDNLVIARTYDHHIYDLIEVG 120

Query: 121 IENFKSMHSFTYDKKLAPKVGSKPFITFIGEGFESVEELKHLKEVLLDLFRGEVVENLNL 180
           IENFKSMHSFTYDKKL+P+VGSKPFITFIGEGFE+VEELKHLKEVLLD+FRGEVVEN+NL
Sbjct: 121 IENFKSMHSFTYDKKLSPRVGSKPFITFIGEGFENVEELKHLKEVLLDMFRGEVVENINL 180

Query: 181 AGLDRVYVCTAISPNKVFLTHCALRLKKSGTLVPRMELVEVGPSMDMVVRRHRLPSDGLR 240
           AGLDRVYVCTAISPNKVFLTHCALR+KKSG++VPRMELVEVGPSMD+VVRRHRLPSDGLR
Sbjct: 181 AGLDRVYVCTAISPNKVFLTHCALRMKKSGSVVPRMELVEVGPSMDLVVRRHRLPSDGLR 240

Query: 241 KEAMKTAKDQAKKKEKNVSVDAIQGKIGRIYIPDQKVGEMAIPNKSKGVKRERREAKMKN 300
           KEAMKTAKDQAKKKEKNVS DAI GKIGRIYIPDQKVG++A+P+KSKGVKRERREAKMKN
Sbjct: 241 KEAMKTAKDQAKKKEKNVSQDAIHGKIGRIYIPDQKVGDVALPDKSKGVKRERREAKMKN 300

Query: 301 STDGPAPKKSKEDSE 316
             D PA KK KEDSE
Sbjct: 301 RDDMPASKKPKEDSE 315

[Close]

BLAST of MS019564 vs. ExPASy TrEMBL
Match: A0A6J1FZZ6 (Ribosome production factor 2 homolog OS=Cucurbita moschata OX=3662 GN=LOC111449459 PE=3 SV=1)

HSP 1 Score: 567.4 bits (1461), Expect = 3.8e-158
Identity = 285/315 (90.48%), Postives = 305/315 (96.83%), Query Frame = 0


Query: 1   MLKVRTPKNGKVKRELEKRAPKLVETGKKTLILHGTKTSSVLNAVLTEIYHLKKESAVKY 60
           MLKVRTPKNGKVKRELEKRAPKLVETGKKTLILHGTKTS VLN VLTEIYHLKKESAVKY
Sbjct: 1   MLKVRTPKNGKVKRELEKRAPKLVETGKKTLILHGTKTSGVLNEVLTEIYHLKKESAVKY 60

Query: 61  SRKNDGIKPFESGGDASLEFFSLKTDCSLIVYGSHSKKRPDNLVIGRTYDHHIYDLIEVG 120
           SR+N+GIKPFE+GGD+SLEFFSLKTDCS+IVYGSHSKKRPDNLVI RTYDHHIYDL+EVG
Sbjct: 61  SRRNEGIKPFENGGDSSLEFFSLKTDCSIIVYGSHSKKRPDNLVIARTYDHHIYDLVEVG 120

Query: 121 IENFKSMHSFTYDKKLAPKVGSKPFITFIGEGFESVEELKHLKEVLLDLFRGEVVENLNL 180
           IENFKSMHSFTYDKKL+P+VGSKPFITFIGEGFE+VEELKHLKEVLLD+FRGEVVEN+NL
Sbjct: 121 IENFKSMHSFTYDKKLSPRVGSKPFITFIGEGFENVEELKHLKEVLLDMFRGEVVENINL 180

Query: 181 AGLDRVYVCTAISPNKVFLTHCALRLKKSGTLVPRMELVEVGPSMDMVVRRHRLPSDGLR 240
           AGLDRVYVCTAISPNKVFLTHCALR+KKSG++VPRMELVEVGPSMD+VVRRHRLPSDGLR
Sbjct: 181 AGLDRVYVCTAISPNKVFLTHCALRMKKSGSVVPRMELVEVGPSMDLVVRRHRLPSDGLR 240

Query: 241 KEAMKTAKDQAKKKEKNVSVDAIQGKIGRIYIPDQKVGEMAIPNKSKGVKRERREAKMKN 300
           KEAMKTAKDQAKKKEKNVS DAI GKIGRIYIPDQKVG++A+P+KSKGVKRER EAKMKN
Sbjct: 241 KEAMKTAKDQAKKKEKNVSQDAIHGKIGRIYIPDQKVGDVALPDKSKGVKRERCEAKMKN 300

Query: 301 STDGPAPKKSKEDSE 316
             +GPA KK KEDSE
Sbjct: 301 RDNGPASKKQKEDSE 315

[Close]

BLAST of MS019564 vs. TAIR 10
Match: AT3G23620.1 (Ribosomal RNA processing Brix domain protein )

HSP 1 Score: 456.4 bits (1173), Expect = 1.8e-128
Identity = 226/315 (71.75%), Postives = 272/315 (86.35%), Query Frame = 0


Query: 1   MLKVRTPKNGKVKRELEKRAPKLVETGKKTLILHGTKTSSVLNAVLTEIYHLKKESAVKY 60
           M+++RTPK GK KR LE RAPKLVETGKKTLILHGTKTS+ L++V+TE+Y LKK  A++Y
Sbjct: 1   MMEIRTPKTGKAKRVLESRAPKLVETGKKTLILHGTKTSATLSSVMTELYRLKKGGAIRY 60

Query: 61  SRKNDGIKPFESGGDASLEFFSLKTDCSLIVYGSHSKKRPDNLVIGRTYDHHIYDLIEVG 120
           SR+N+ I+PFESGG+ SLEFFS KTDCS+ VYGSH+KKRPDNLV+GR YDH +YDLIEVG
Sbjct: 61  SRRNENIRPFESGGETSLEFFSQKTDCSIFVYGSHTKKRPDNLVLGRMYDHQVYDLIEVG 120

Query: 121 IENFKSMHSFTYDKKLAPKVGSKPFITFIGEGFESVEELKHLKEVLLDLFRGEVVENLNL 180
           IENFKS+ +F+YDKK AP  G+KPFI FIGEGFE+V ELKHLKEVL DLFRGEVV+NLNL
Sbjct: 121 IENFKSLRAFSYDKKFAPHEGTKPFICFIGEGFENVSELKHLKEVLTDLFRGEVVDNLNL 180

Query: 181 AGLDRVYVCTAISPNKVFLTHCALRLKKSGTLVPRMELVEVGPSMDMVVRRHRLPSDGLR 240
            GLDR YVC+AISP KVFLTHCAL+LKKSG++VPRMELVEVGPSMD+V+RR+RLP+D L 
Sbjct: 181 TGLDRAYVCSAISPTKVFLTHCALKLKKSGSIVPRMELVEVGPSMDLVIRRNRLPNDSLM 240

Query: 241 KEAMKTAKDQAKKKEKNVSVDAIQGKIGRIYIPDQKVGEMAIPNKSKGVKRERREAKMKN 300
           KEAM+T+KD+ KKKEKNV  DA+ GK G+IY+PDQK+ EM + +KSKG KRER++AK+K+
Sbjct: 241 KEAMRTSKDKPKKKEKNVDQDAVLGKTGKIYMPDQKLKEMKLFDKSKGSKRERKDAKLKH 300

Query: 301 STDGPAPKKSKEDSE 316
             +  A KK K  SE
Sbjct: 301 KEETVA-KKMKVSSE 314

The following BLAST results are available for this feature:

BLAST of MS019564 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022144774.1	4.0e-170	99.37	ribosome production factor 2 homolog [Momordica charantia] >XP_022144775.1 ribos...	[more]
KAG6580669.1	6.8e-162	93.33	Ribosome production factor 2-like protein, partial [Cucurbita argyrosperma subsp...	[more]
XP_022934916.1	8.9e-162	93.02	ribosome production factor 2 homolog [Cucurbita moschata] >XP_023527626.1 riboso...	[more]
XP_022983029.1	2.0e-161	93.33	ribosome production factor 2 homolog [Cucurbita maxima]	[more]
KAG7017424.1	2.0e-161	92.70	Ribosome production factor 2-like protein [Cucurbita argyrosperma subsp. argyros...	[more]

BLAST of MS019564 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9LUG5	2.5e-127	71.75	Ribosome production factor 2 homolog OS=Arabidopsis thaliana OX=3702 GN=At3g2362...	[more]
Q9AWM9	5.8e-124	71.84	Ribosome production factor 2 homolog OS=Oryza sativa subsp. japonica OX=39947 GN...	[more]
Q9H7B2	1.2e-57	44.71	Ribosome production factor 2 homolog OS=Homo sapiens OX=9606 GN=RPF2 PE=1 SV=2	[more]
Q2YDN6	1.6e-57	43.96	Ribosome production factor 2 homolog OS=Bos taurus OX=9913 GN=RPF2 PE=2 SV=1	[more]
Q9JJ80	2.8e-57	44.66	Ribosome production factor 2 homolog OS=Mus musculus OX=10090 GN=Rpf2 PE=2 SV=2	[more]

BLAST of MS019564 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1CTA1	1.9e-170	99.37	Ribosome production factor 2 homolog OS=Momordica charantia OX=3673 GN=LOC111014...	[more]
A0A6J1F357	4.3e-162	93.02	Ribosome production factor 2 homolog OS=Cucurbita moschata OX=3662 GN=LOC1114419...	[more]
A0A6J1J655	9.6e-162	93.33	Ribosome production factor 2 homolog OS=Cucurbita maxima OX=3661 GN=LOC111481697...	[more]
A0A6J1KZU6	1.3e-158	91.11	Ribosome production factor 2 homolog OS=Cucurbita maxima OX=3661 GN=LOC111498582...	[more]
A0A6J1FZZ6	3.8e-158	90.48	Ribosome production factor 2 homolog OS=Cucurbita moschata OX=3662 GN=LOC1114494...	[more]

BLAST of MS019564 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G23620.1	1.8e-128	71.75	Ribosomal RNA processing Brix domain protein	[more]

InterPro

Analysis Name: InterPro Annotations of Bitter gourd (TR) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR007109	Brix domain	SMART	SM00879	Brix_2	coord: 31..232 e-value: 8.3E-37 score: 138.3
IPR007109	Brix domain	PFAM	PF04427	Brix	coord: 35..231 e-value: 2.9E-32 score: 112.4
IPR007109	Brix domain	PROSITE	PS50833	BRIX	coord: 28..238 score: 23.029848
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 285..315
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 278..315
IPR039770	Ribosome biogenesis protein Rpf2	PANTHER	PTHR12728	BRIX DOMAIN CONTAINING PROTEIN	coord: 1..310

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
MS019564.1	MS019564.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0000470	maturation of LSU-rRNA
biological_process	GO:0000027	ribosomal large subunit assembly
biological_process	GO:0006364	rRNA processing
molecular_function	GO:0019843	rRNA binding