MS019538 (gene) Bitter gourd (TR) v1

Overview


Name	MS019538
Type	gene
Organism	Momordica charantia cv. TR (Bitter gourd (TR) v1)
Description	PEBP (phosphatidylethanolamine-binding protein) family protein
Location	scaffold729: 269877 .. 271958 (+)
RNA-Seq Expression	MS019538
Synteny	MS019538

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATAATGGCAAGAATAATGTCATCAGAGCCTCTGGTTGTTGGGAGAGTTATAGGAGATGTTCTTGATTTCTTCAGCCAAAGCATGAAGATGTCTGTTTTTTATAGCAACAATAAGCAAGTTTTTAATGGCCATGAGCTCTTCCCTTCTGCTGTTGCTGCCAAACCTAGGGTTGAAATCCATGGAGGAGACTTGAGATCTTTCTTCACTCTGGTTTCTCTCTCTCTCTAATCTTTCTCTCTCTATGAATGTTTCGTTTGATTTCTTTTACCAACACTTCTCTTTGCCTGTGGGTTTGGAAGTTGGTGTATCAGGCCTAAAACAAGTAACTACCCATGTCGATTATGGGAGAAGTTATGTTATAAGGGTTTGAAATACACGACTTTTCGCTTTGATACTTGTTTGATTATTACTGATGTAGATGAGACCAAATTCATATGTTTTGATAAACTTCCGATTATGAAAGAAATTATGTTACAGGGGTTTGAAATACAAGGGTTTCTGCTTTGATACCTTGTTTAATTATTACTGATGTAGATGGTGACAAACTGTATGTTTTGATGAACTTAAAAAAAAAAAGAAGGAAAAAAAAAAAACAAAACCCATATGTTTTTCCTCTCTCCATGTTTCTTATTTTATTTTCATATTTTTGTTTAAAATANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTCTCTACTCTTCTTTTACTTGTAAACCTGAGAACTAGAACGTAAGAATTCTTGATATCATGTAAAATCTCACCAATAATATTTTACTTAGTTATTTTTCTGAATATTTTTATTTTTTTTTACTTTTTCAGATTATGACAGATCCGGATGTTCCTGGTCCTAGTGATCCTTATTTAAGAGAGCATTTACACTGGTAAATATTTATATATATTTTAGTATCCAACGAAAGTGGAGATTCGAATTGTCACCAGAAATAAGTGGTTTAATCAGGTTTTTTAGAACAATTAGTGGGAACGAGATCTAAACTCACAACCTCATGGTTGGAGGTAAGTATCAACACCGCTGAATTAAGTTTGTGTTGGCAATGATTTAATCAGTTGAACTATACGTTCAGATTGTCATTAATATATTAATATATTATTATATGTTATGTGTTAGAGTTATTATAAATTGCATGCATGAAACCGACCAAATTAAATTTGACTTTGAAAAGCACTGAGAAAATCGATGTCGTTAATTAGGGGATGTGAAGTTTTGGATTTAGCTTCTGAAGAACCTTCTTTCATGTTCATTTCTTTTGCAGAATTGTCAAACTAAATAGAATCAGTTGGATTCTTTTAATTATTATTATTATTATTATTATTATTTGCATAGAAATTTGTGATTTGATTTGGGCCTTCCCTCAGACACCACCCAGAAAAACAAATGCTGGGGTTAAGATTTTTTTACCTTGTTCATTTAGAAATTAACATAAACAAAAGTTACAAAGAAAACTAACAGTTTTAACTGTACAATTTTCTATGTTGCAGGATTGTGACAGACATCCCTGGCACTACAGACGCCACATTCGGTAACTACTTTTTCTATCAGGAAAAAGAAAAAAAATAAATAAATAAAATTAGAGAAACCTAAAAATTTTACACGGTTAAATTTACAAGTAACTCGAATCTGTATTTAGTAGTTATTGGATATCTATTTTAATAAATTTTCAGAAAAAGAGTTACCTCTTTACTAATTTTTTATACGTATAATATTTTTATTTTAAAAGTTTAGATATATTTTTTATATGTATAATAATTAGATTCGAGATATATTTTGTAAAATTACCAGTCACATTATCATAATAATTTTGAATTTTGGTTCGGACACAGGAAAAGAGGTGATAAGCTACGAGAATCCGAGGCCAAACATAGGAATCCACAGGTTCGTGTTTGTTCTTTTCAAGCAGACGCGCAGACAATCGGTGATCCCGCCGTCTTCAAGGGATGGCTTCAATACTAGAGCCTTTGCTGCAGACAACAATCTCGGCCTCCCCGTCGCTGCCGTCTACTTCAACGCCCAGCGAGAAACCGCCGCCAGAAGGCGC

mRNA sequence

ATAATGGCAAGAATAATGTCATCAGAGCCTCTGGTTGTTGGGAGAGTTATAGGAGATGTTCTTGATTTCTTCAGCCAAAGCATGAAGATGTCTGTTTTTTATAGCAACAATAAGCAAGTTTTTAATGGCCATGAGCTCTTCCCTTCTGCTGTTGCTGCCAAACCTAGGGTTGAAATCCATGGAGGAGACTTGAGATCTTTCTTCACTCTGATTATGACAGATCCGGATGTTCCTGGTCCTAGTGATCCTTATTTAAGAGAGCATTTACACTGGATTGTGACAGACATCCCTGGCACTACAGACGCCACATTCGGAAAAGAGGTGATAAGCTACGAGAATCCGAGGCCAAACATAGGAATCCACAGGTTCGTGTTTGTTCTTTTCAAGCAGACGCGCAGACAATCGGTGATCCCGCCGTCTTCAAGGGATGGCTTCAATACTAGAGCCTTTGCTGCAGACAACAATCTCGGCCTCCCCGTCGCTGCCGTCTACTTCAACGCCCAGCGAGAAACCGCCGCCAGAAGGCGC

Coding sequence (CDS)

ATAATGGCAAGAATAATGTCATCAGAGCCTCTGGTTGTTGGGAGAGTTATAGGAGATGTTCTTGATTTCTTCAGCCAAAGCATGAAGATGTCTGTTTTTTATAGCAACAATAAGCAAGTTTTTAATGGCCATGAGCTCTTCCCTTCTGCTGTTGCTGCCAAACCTAGGGTTGAAATCCATGGAGGAGACTTGAGATCTTTCTTCACTCTGATTATGACAGATCCGGATGTTCCTGGTCCTAGTGATCCTTATTTAAGAGAGCATTTACACTGGATTGTGACAGACATCCCTGGCACTACAGACGCCACATTCGGAAAAGAGGTGATAAGCTACGAGAATCCGAGGCCAAACATAGGAATCCACAGGTTCGTGTTTGTTCTTTTCAAGCAGACGCGCAGACAATCGGTGATCCCGCCGTCTTCAAGGGATGGCTTCAATACTAGAGCCTTTGCTGCAGACAACAATCTCGGCCTCCCCGTCGCTGCCGTCTACTTCAACGCCCAGCGAGAAACCGCCGCCAGAAGGCGC

Protein sequence

IMARIMSSEPLVVGRVIGDVLDFFSQSMKMSVFYSNNKQVFNGHELFPSAVAAKPRVEIHGGDLRSFFTLIMTDPDVPGPSDPYLREHLHWIVTDIPGTTDATFGKEVISYENPRPNIGIHRFVFVLFKQTRRQSVIPPSSRDGFNTRAFAADNNLGLPVAAVYFNAQRETAARRR

Homology

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BLAST of MS019538 vs. NCBI nr
Match: XP_022144705.1 (protein CENTRORADIALIS-like [Momordica charantia])

HSP 1 Score: 359.8 bits (922), Expect = 1.4e-95
Identity = 175/175 (100.00%), Postives = 175/175 (100.00%), Query Frame = 0


Query: 2   MARIMSSEPLVVGRVIGDVLDFFSQSMKMSVFYSNNKQVFNGHELFPSAVAAKPRVEIHG 61
           MARIMSSEPLVVGRVIGDVLDFFSQSMKMSVFYSNNKQVFNGHELFPSAVAAKPRVEIHG
Sbjct: 1   MARIMSSEPLVVGRVIGDVLDFFSQSMKMSVFYSNNKQVFNGHELFPSAVAAKPRVEIHG 60

Query: 62  GDLRSFFTLIMTDPDVPGPSDPYLREHLHWIVTDIPGTTDATFGKEVISYENPRPNIGIH 121
           GDLRSFFTLIMTDPDVPGPSDPYLREHLHWIVTDIPGTTDATFGKEVISYENPRPNIGIH
Sbjct: 61  GDLRSFFTLIMTDPDVPGPSDPYLREHLHWIVTDIPGTTDATFGKEVISYENPRPNIGIH 120

Query: 122 RFVFVLFKQTRRQSVIPPSSRDGFNTRAFAADNNLGLPVAAVYFNAQRETAARRR 177
           RFVFVLFKQTRRQSVIPPSSRDGFNTRAFAADNNLGLPVAAVYFNAQRETAARRR
Sbjct: 121 RFVFVLFKQTRRQSVIPPSSRDGFNTRAFAADNNLGLPVAAVYFNAQRETAARRR 175

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BLAST of MS019538 vs. NCBI nr
Match: NP_001267654.1 (protein SELF-PRUNING-like [Cucumis sativus] >KGN59123.1 hypothetical protein Csa_001098 [Cucumis sativus] >BAH28255.1 TFL1-like protein [Cucumis sativus])

HSP 1 Score: 327.4 bits (838), Expect = 7.6e-86
Identity = 157/171 (91.81%), Postives = 163/171 (95.32%), Query Frame = 0


Query: 6   MSSEPLVVGRVIGDVLDFFSQSMKMSVFYSNNKQVFNGHELFPSAVAAKPRVEIHGGDLR 65
           MSSEPLVVGRVIGDVLD F+QSMKMSVFYSNNKQVFNGHE FPSAVAAKPR EIHGGDLR
Sbjct: 7   MSSEPLVVGRVIGDVLDSFTQSMKMSVFYSNNKQVFNGHEFFPSAVAAKPRAEIHGGDLR 66

Query: 66  SFFTLIMTDPDVPGPSDPYLREHLHWIVTDIPGTTDATFGKEVISYENPRPNIGIHRFVF 125
           SFFTLIMTDPDVPGPSDPYLREHLHWIVTDIPGTTDATFG+EV+SYE P+PNIGIHRFVF
Sbjct: 67  SFFTLIMTDPDVPGPSDPYLREHLHWIVTDIPGTTDATFGREVVSYETPKPNIGIHRFVF 126

Query: 126 VLFKQTRRQSVIPPSSRDGFNTRAFAADNNLGLPVAAVYFNAQRETAARRR 177
           VLFKQ RRQSV PPSSR+ FNTRAFA DN+LGLPVAAVYFNAQRETAARRR
Sbjct: 127 VLFKQKRRQSVNPPSSRERFNTRAFAVDNDLGLPVAAVYFNAQRETAARRR 177

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BLAST of MS019538 vs. NCBI nr
Match: XP_023528346.1 (protein SELF-PRUNING-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 306.2 bits (783), Expect = 1.8e-79
Identity = 151/175 (86.29%), Postives = 161/175 (92.00%), Query Frame = 0


Query: 2   MARIMSSEPLVVGRVIGDVLDFFSQSMKMSVFYSNNKQVFNGHELFPSAVAAKPRVEIHG 61
           MAR +SSEPLVVGRVIGDVLD F+QSMKM+V Y NNKQVFNGHE FPSAVAAKP+ EI G
Sbjct: 1   MARSVSSEPLVVGRVIGDVLDPFTQSMKMTVSY-NNKQVFNGHEFFPSAVAAKPKAEILG 60

Query: 62  GDLRSFFTLIMTDPDVPGPSDPYLREHLHWIVTDIPGTTDATFGKEVISYENPRPNIGIH 121
           GDLRSFFTL+MTDPDVPGPSDPYLREHLHWIVTDIPGTTDATFG+EVISYE PRPNIGIH
Sbjct: 61  GDLRSFFTLVMTDPDVPGPSDPYLREHLHWIVTDIPGTTDATFGREVISYETPRPNIGIH 120

Query: 122 RFVFVLFKQTRRQSVIPPSSRDGFNTRAFAADNNLGLPVAAVYFNAQRETAARRR 177
           RFVFVLFKQ RRQ+V  PSSRD F+TR FAA+N+LG PVAAVYFNAQRETAARRR
Sbjct: 121 RFVFVLFKQKRRQTVSAPSSRDHFSTRVFAAENDLGDPVAAVYFNAQRETAARRR 174

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BLAST of MS019538 vs. NCBI nr
Match: KAG6580691.1 (Protein SELF-PRUNING, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 305.8 bits (782), Expect = 2.4e-79
Identity = 151/175 (86.29%), Postives = 161/175 (92.00%), Query Frame = 0


Query: 2   MARIMSSEPLVVGRVIGDVLDFFSQSMKMSVFYSNNKQVFNGHELFPSAVAAKPRVEIHG 61
           MAR +SSEPLVVGRVIGDVLD F+QSMKM+V Y NNKQVFNGHE FPSAVAAKP+ EI G
Sbjct: 1   MARSVSSEPLVVGRVIGDVLDPFTQSMKMTVSY-NNKQVFNGHEFFPSAVAAKPKAEILG 60

Query: 62  GDLRSFFTLIMTDPDVPGPSDPYLREHLHWIVTDIPGTTDATFGKEVISYENPRPNIGIH 121
           GDLRSFFTL+MTDPDVPGPSDPYLREHLHWIVTDIPGTTDATFG+EVISYE PRPNIGIH
Sbjct: 61  GDLRSFFTLVMTDPDVPGPSDPYLREHLHWIVTDIPGTTDATFGREVISYETPRPNIGIH 120

Query: 122 RFVFVLFKQTRRQSVIPPSSRDGFNTRAFAADNNLGLPVAAVYFNAQRETAARRR 177
           RFVFVLFKQ RRQ+V  PSSRD F+TR FAA+N+LG PVAAVYFNAQRETAARRR
Sbjct: 121 RFVFVLFKQKRRQTVSAPSSRDHFSTRIFAAENDLGDPVAAVYFNAQRETAARRR 174

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BLAST of MS019538 vs. NCBI nr
Match: XP_022983119.1 (protein SELF-PRUNING-like [Cucurbita maxima])

HSP 1 Score: 305.1 bits (780), Expect = 4.0e-79
Identity = 149/175 (85.14%), Postives = 161/175 (92.00%), Query Frame = 0


Query: 2   MARIMSSEPLVVGRVIGDVLDFFSQSMKMSVFYSNNKQVFNGHELFPSAVAAKPRVEIHG 61
           MAR +SSEPLVVGRVIGDVLD F+Q+MKM+V Y NNKQVFNGHE FPSAVAAKP+ EI G
Sbjct: 1   MARSVSSEPLVVGRVIGDVLDSFTQTMKMTVSY-NNKQVFNGHEFFPSAVAAKPKAEILG 60

Query: 62  GDLRSFFTLIMTDPDVPGPSDPYLREHLHWIVTDIPGTTDATFGKEVISYENPRPNIGIH 121
           GDLRSFFTL+MTDPDVPGPSDPYLREHLHWIVTDIPGTTDATFG+EVISYE P+PNIGIH
Sbjct: 61  GDLRSFFTLVMTDPDVPGPSDPYLREHLHWIVTDIPGTTDATFGREVISYETPKPNIGIH 120

Query: 122 RFVFVLFKQTRRQSVIPPSSRDGFNTRAFAADNNLGLPVAAVYFNAQRETAARRR 177
           RFVFVLFKQ RRQ+V  PSSRD F+TR FAA+N+LG PVAAVYFNAQRETAARRR
Sbjct: 121 RFVFVLFKQKRRQTVSAPSSRDHFSTRVFAAENDLGNPVAAVYFNAQRETAARRR 174

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BLAST of MS019538 vs. ExPASy Swiss-Prot
Match: Q9ZNV5 (Protein CENTRORADIALIS-like OS=Arabidopsis thaliana OX=3702 GN=CEN PE=2 SV=1)

HSP 1 Score: 282.7 bits (722), Expect = 2.8e-75
Identity = 135/176 (76.70%), Postives = 157/176 (89.20%), Query Frame = 0


Query: 2   MARIMSSEPLVVGRVIGDVLDFFSQSMKMSVFYSNNKQVFNGHELFPSAVAAKPRVEIHG 61
           MARI SS+PL+VGRVIGDV+D   Q++KM+V Y+++KQV+NGHELFPS V  KP+VE+HG
Sbjct: 1   MARI-SSDPLMVGRVIGDVVDNCLQAVKMTVTYNSDKQVYNGHELFPSVVTYKPKVEVHG 60

Query: 62  GDLRSFFTLIMTDPDVPGPSDPYLREHLHWIVTDIPGTTDATFGKEVISYENPRPNIGIH 121
           GD+RSFFTL+MTDPDVPGPSDPYLREHLHWIVTDIPGTTD +FGKE+I YE PRPNIGIH
Sbjct: 61  GDMRSFFTLVMTDPDVPGPSDPYLREHLHWIVTDIPGTTDVSFGKEIIGYEMPRPNIGIH 120

Query: 122 RFVFVLFKQTRRQSVIP-PSSRDGFNTRAFAADNNLGLPVAAVYFNAQRETAARRR 177
           RFV++LFKQTRR SV+  PS RD FNTR FA +N+LGLPVAAV+FN QRETAARRR
Sbjct: 121 RFVYLLFKQTRRGSVVSVPSYRDQFNTREFAHENDLGLPVAAVFFNCQRETAARRR 175

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BLAST of MS019538 vs. ExPASy Swiss-Prot
Match: Q9XH43 (CEN-like protein 2 OS=Nicotiana tabacum OX=4097 GN=CET2 PE=2 SV=1)

HSP 1 Score: 279.6 bits (714), Expect = 2.4e-74
Identity = 128/170 (75.29%), Postives = 152/170 (89.41%), Query Frame = 0


Query: 8   SEPLVVGRVIGDVLDFFSQSMKMSVFYSNNKQVFNGHELFPSAVAAKPRVEIHGGDLRSF 67
           S+PLV+GRVIG+V+D+F+ S+KMSV Y+++K V+NGHELFPS+V +KPRVE+HGGDLRSF
Sbjct: 6   SDPLVIGRVIGEVVDYFTPSVKMSVTYNSSKHVYNGHELFPSSVTSKPRVEVHGGDLRSF 65

Query: 68  FTLIMTDPDVPGPSDPYLREHLHWIVTDIPGTTDATFGKEVISYENPRPNIGIHRFVFVL 127
           FT+IM DPDVPGPSDPYLREHLHWIVTDIPGTTD +FGKE++ YE PRPNIGIHRFVF+L
Sbjct: 66  FTMIMIDPDVPGPSDPYLREHLHWIVTDIPGTTDCSFGKEIVGYEMPRPNIGIHRFVFLL 125

Query: 128 FKQTRRQSVI-PPSSRDGFNTRAFAADNNLGLPVAAVYFNAQRETAARRR 177
           FKQ +RQ+V+  P SRD FNTR FA +N LG PVAAV+FN QRETAARRR
Sbjct: 126 FKQKKRQTVLTAPLSRDRFNTRKFAEENELGSPVAAVFFNCQRETAARRR 175

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BLAST of MS019538 vs. ExPASy Swiss-Prot
Match: Q41261 (Protein CENTRORADIALIS OS=Antirrhinum majus OX=4151 GN=CEN PE=1 SV=1)

HSP 1 Score: 279.3 bits (713), Expect = 3.1e-74
Identity = 134/181 (74.03%), Postives = 157/181 (86.74%), Query Frame = 0


Query: 2   MARIMSSEPLVVGRVIGDVLDFFSQSMKMSVFYSNN---KQVFNGHELFPSAVAAKPRVE 61
           MA  +SS+PLV+GRVIGDV+D F+ ++KMSV Y++N   K V+NGHELFPSAV + PRVE
Sbjct: 1   MAAKVSSDPLVIGRVIGDVVDHFTSTVKMSVIYNSNNSIKHVYNGHELFPSAVTSTPRVE 60

Query: 62  IHGGDLRSFFTLIMTDPDVPGPSDPYLREHLHWIVTDIPGTTDATFGKEVISYENPRPNI 121
           +HGGD+RSFFTLIMTDPDVPGPSDPYLREHLHWIVTDIPGTTD++FGKEV+SYE PRPNI
Sbjct: 61  VHGGDMRSFFTLIMTDPDVPGPSDPYLREHLHWIVTDIPGTTDSSFGKEVVSYEMPRPNI 120

Query: 122 GIHRFVFVLFKQTRR-QSVIPPS--SRDGFNTRAFAADNNLGLPVAAVYFNAQRETAARR 177
           GIHRFVF+LFKQ +R Q+++ P    RDGFNTR F  +N LGLPVAAV+FN QRETAARR
Sbjct: 121 GIHRFVFLLFKQKKRGQAMLSPPVVCRDGFNTRKFTQENELGLPVAAVFFNCQRETAARR 180

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BLAST of MS019538 vs. ExPASy Swiss-Prot
Match: Q9XH42 (CEN-like protein 4 OS=Nicotiana tabacum OX=4097 GN=CET4 PE=2 SV=1)

HSP 1 Score: 275.4 bits (703), Expect = 4.5e-73
Identity = 125/170 (73.53%), Postives = 151/170 (88.82%), Query Frame = 0


Query: 8   SEPLVVGRVIGDVLDFFSQSMKMSVFYSNNKQVFNGHELFPSAVAAKPRVEIHGGDLRSF 67
           S+PLV+GRVIG+V+D+F+ S+KMSV Y+++K V+NGHELFPS+V +KPRVE+HGGDLRSF
Sbjct: 6   SDPLVIGRVIGEVVDYFTPSVKMSVTYNSSKHVYNGHELFPSSVTSKPRVEVHGGDLRSF 65

Query: 68  FTLIMTDPDVPGPSDPYLREHLHWIVTDIPGTTDATFGKEVISYENPRPNIGIHRFVFVL 127
           FTLIM DPDVPGPSDPYLREHLHWIVTDIPGTTD +FG+E++ YE PRPNIGIHRFVF+L
Sbjct: 66  FTLIMIDPDVPGPSDPYLREHLHWIVTDIPGTTDCSFGREIVGYEMPRPNIGIHRFVFLL 125

Query: 128 FKQTRRQSVI-PPSSRDGFNTRAFAADNNLGLPVAAVYFNAQRETAARRR 177
           FKQ +RQ+++  P SRD FNTR F+ +N LG PVAA +FN QRETAARRR
Sbjct: 126 FKQKKRQTLLSAPLSRDRFNTRKFSEENELGSPVAAAFFNCQRETAARRR 175

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BLAST of MS019538 vs. ExPASy Swiss-Prot
Match: O82088 (Protein SELF-PRUNING OS=Solanum lycopersicum OX=4081 GN=SP PE=2 SV=1)

HSP 1 Score: 274.2 bits (700), Expect = 1.0e-72
Identity = 126/169 (74.56%), Postives = 148/169 (87.57%), Query Frame = 0


Query: 9   EPLVVGRVIGDVLDFFSQSMKMSVFYSNNKQVFNGHELFPSAVAAKPRVEIHGGDLRSFF 68
           EPLV+GRVIG+V+D+F  S+KMSV Y+NNK V+NGHE FPS+V +KPRVE+HGGDLRSFF
Sbjct: 7   EPLVIGRVIGEVVDYFCPSVKMSVVYNNNKHVYNGHEFFPSSVTSKPRVEVHGGDLRSFF 66

Query: 69  TLIMTDPDVPGPSDPYLREHLHWIVTDIPGTTDATFGKEVISYENPRPNIGIHRFVFVLF 128
           TLIM DPDVPGPSDPYLREHLHWIVTDIPGTTD +FG+EV+ YE PRPNIGIHRFVF+LF
Sbjct: 67  TLIMIDPDVPGPSDPYLREHLHWIVTDIPGTTDCSFGREVVGYEMPRPNIGIHRFVFLLF 126

Query: 129 KQTRRQSV-IPPSSRDGFNTRAFAADNNLGLPVAAVYFNAQRETAARRR 177
           KQ +RQ++   P SRD F++R F+ +N LG PVAAV+FN QRETAARRR
Sbjct: 127 KQKKRQTISSAPVSRDQFSSRKFSEENELGSPVAAVFFNCQRETAARRR 175

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BLAST of MS019538 vs. ExPASy TrEMBL
Match: A0A6J1CSD8 (protein CENTRORADIALIS-like OS=Momordica charantia OX=3673 GN=LOC111014329 PE=3 SV=1)

HSP 1 Score: 359.8 bits (922), Expect = 6.7e-96
Identity = 175/175 (100.00%), Postives = 175/175 (100.00%), Query Frame = 0


Query: 2   MARIMSSEPLVVGRVIGDVLDFFSQSMKMSVFYSNNKQVFNGHELFPSAVAAKPRVEIHG 61
           MARIMSSEPLVVGRVIGDVLDFFSQSMKMSVFYSNNKQVFNGHELFPSAVAAKPRVEIHG
Sbjct: 1   MARIMSSEPLVVGRVIGDVLDFFSQSMKMSVFYSNNKQVFNGHELFPSAVAAKPRVEIHG 60

Query: 62  GDLRSFFTLIMTDPDVPGPSDPYLREHLHWIVTDIPGTTDATFGKEVISYENPRPNIGIH 121
           GDLRSFFTLIMTDPDVPGPSDPYLREHLHWIVTDIPGTTDATFGKEVISYENPRPNIGIH
Sbjct: 61  GDLRSFFTLIMTDPDVPGPSDPYLREHLHWIVTDIPGTTDATFGKEVISYENPRPNIGIH 120

Query: 122 RFVFVLFKQTRRQSVIPPSSRDGFNTRAFAADNNLGLPVAAVYFNAQRETAARRR 177
           RFVFVLFKQTRRQSVIPPSSRDGFNTRAFAADNNLGLPVAAVYFNAQRETAARRR
Sbjct: 121 RFVFVLFKQTRRQSVIPPSSRDGFNTRAFAADNNLGLPVAAVYFNAQRETAARRR 175

[Close]

BLAST of MS019538 vs. ExPASy TrEMBL
Match: B9ZYL2 (TFL1-like protein OS=Cucumis sativus OX=3659 GN=CsTFL1b PE=2 SV=1)

HSP 1 Score: 327.4 bits (838), Expect = 3.7e-86
Identity = 157/171 (91.81%), Postives = 163/171 (95.32%), Query Frame = 0


Query: 6   MSSEPLVVGRVIGDVLDFFSQSMKMSVFYSNNKQVFNGHELFPSAVAAKPRVEIHGGDLR 65
           MSSEPLVVGRVIGDVLD F+QSMKMSVFYSNNKQVFNGHE FPSAVAAKPR EIHGGDLR
Sbjct: 7   MSSEPLVVGRVIGDVLDSFTQSMKMSVFYSNNKQVFNGHEFFPSAVAAKPRAEIHGGDLR 66

Query: 66  SFFTLIMTDPDVPGPSDPYLREHLHWIVTDIPGTTDATFGKEVISYENPRPNIGIHRFVF 125
           SFFTLIMTDPDVPGPSDPYLREHLHWIVTDIPGTTDATFG+EV+SYE P+PNIGIHRFVF
Sbjct: 67  SFFTLIMTDPDVPGPSDPYLREHLHWIVTDIPGTTDATFGREVVSYETPKPNIGIHRFVF 126

Query: 126 VLFKQTRRQSVIPPSSRDGFNTRAFAADNNLGLPVAAVYFNAQRETAARRR 177
           VLFKQ RRQSV PPSSR+ FNTRAFA DN+LGLPVAAVYFNAQRETAARRR
Sbjct: 127 VLFKQKRRQSVNPPSSRERFNTRAFAVDNDLGLPVAAVYFNAQRETAARRR 177

[Close]

BLAST of MS019538 vs. ExPASy TrEMBL
Match: A0A6J1J6E2 (protein SELF-PRUNING-like OS=Cucurbita maxima OX=3661 GN=LOC111481762 PE=3 SV=1)

HSP 1 Score: 305.1 bits (780), Expect = 1.9e-79
Identity = 149/175 (85.14%), Postives = 161/175 (92.00%), Query Frame = 0


Query: 2   MARIMSSEPLVVGRVIGDVLDFFSQSMKMSVFYSNNKQVFNGHELFPSAVAAKPRVEIHG 61
           MAR +SSEPLVVGRVIGDVLD F+Q+MKM+V Y NNKQVFNGHE FPSAVAAKP+ EI G
Sbjct: 1   MARSVSSEPLVVGRVIGDVLDSFTQTMKMTVSY-NNKQVFNGHEFFPSAVAAKPKAEILG 60

Query: 62  GDLRSFFTLIMTDPDVPGPSDPYLREHLHWIVTDIPGTTDATFGKEVISYENPRPNIGIH 121
           GDLRSFFTL+MTDPDVPGPSDPYLREHLHWIVTDIPGTTDATFG+EVISYE P+PNIGIH
Sbjct: 61  GDLRSFFTLVMTDPDVPGPSDPYLREHLHWIVTDIPGTTDATFGREVISYETPKPNIGIH 120

Query: 122 RFVFVLFKQTRRQSVIPPSSRDGFNTRAFAADNNLGLPVAAVYFNAQRETAARRR 177
           RFVFVLFKQ RRQ+V  PSSRD F+TR FAA+N+LG PVAAVYFNAQRETAARRR
Sbjct: 121 RFVFVLFKQKRRQTVSAPSSRDHFSTRVFAAENDLGNPVAAVYFNAQRETAARRR 174

[Close]

BLAST of MS019538 vs. ExPASy TrEMBL
Match: A0A6J1F9W4 (protein SELF-PRUNING-like OS=Cucurbita moschata OX=3662 GN=LOC111442134 PE=3 SV=1)

HSP 1 Score: 303.9 bits (777), Expect = 4.3e-79
Identity = 150/175 (85.71%), Postives = 160/175 (91.43%), Query Frame = 0


Query: 2   MARIMSSEPLVVGRVIGDVLDFFSQSMKMSVFYSNNKQVFNGHELFPSAVAAKPRVEIHG 61
           MAR +SSEPLVVGRVIGDVLD F+QSMKM+V Y NNKQVFNGHE FPSAVAAKP+ EI G
Sbjct: 1   MARSVSSEPLVVGRVIGDVLDPFTQSMKMTVSY-NNKQVFNGHEFFPSAVAAKPKAEILG 60

Query: 62  GDLRSFFTLIMTDPDVPGPSDPYLREHLHWIVTDIPGTTDATFGKEVISYENPRPNIGIH 121
            DLRSFFTL+MTDPDVPGPSDPYLREHLHWIVTDIPGTTDATFG+EVISYE PRPNIGIH
Sbjct: 61  ADLRSFFTLVMTDPDVPGPSDPYLREHLHWIVTDIPGTTDATFGREVISYETPRPNIGIH 120

Query: 122 RFVFVLFKQTRRQSVIPPSSRDGFNTRAFAADNNLGLPVAAVYFNAQRETAARRR 177
           RFVFVLFKQ RRQ+V  PSSRD F+TR FAA+N+LG PVAAVYFNAQRETAARRR
Sbjct: 121 RFVFVLFKQKRRQTVSAPSSRDHFSTRVFAAENDLGDPVAAVYFNAQRETAARRR 174

[Close]

BLAST of MS019538 vs. ExPASy TrEMBL
Match: A0A2N9H847 (Uncharacterized protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS35702 PE=3 SV=1)

HSP 1 Score: 302.4 bits (773), Expect = 1.3e-78
Identity = 146/175 (83.43%), Postives = 160/175 (91.43%), Query Frame = 0


Query: 2   MARIMSSEPLVVGRVIGDVLDFFSQSMKMSVFYSNNKQVFNGHELFPSAVAAKPRVEIHG 61
           MARI  SEPLVVGRVIGDVLD F+ S+KMS+ Y NNKQV NGHEL+PS V  KPRVE+ G
Sbjct: 1   MARI--SEPLVVGRVIGDVLDSFTPSIKMSITY-NNKQVCNGHELYPSTVTTKPRVEVQG 60

Query: 62  GDLRSFFTLIMTDPDVPGPSDPYLREHLHWIVTDIPGTTDATFGKEVISYENPRPNIGIH 121
           GD+RSFFTL+MTDPDVPGPSDPYLREHLHWIVTDIPGTTD TFG+EV++YENPRPNIGIH
Sbjct: 61  GDMRSFFTLVMTDPDVPGPSDPYLREHLHWIVTDIPGTTDVTFGREVVNYENPRPNIGIH 120

Query: 122 RFVFVLFKQTRRQSVIPPSSRDGFNTRAFAADNNLGLPVAAVYFNAQRETAARRR 177
           RFVFVLFKQ RRQSV PPSSRD F+TR+FAA+N+LGLPVAAVYFNAQRETAARRR
Sbjct: 121 RFVFVLFKQNRRQSVTPPSSRDHFSTRSFAAENDLGLPVAAVYFNAQRETAARRR 172

[Close]

BLAST of MS019538 vs. TAIR 10
Match: AT2G27550.1 (centroradialis )

HSP 1 Score: 282.7 bits (722), Expect = 2.0e-76
Identity = 135/176 (76.70%), Postives = 157/176 (89.20%), Query Frame = 0


Query: 2   MARIMSSEPLVVGRVIGDVLDFFSQSMKMSVFYSNNKQVFNGHELFPSAVAAKPRVEIHG 61
           MARI SS+PL+VGRVIGDV+D   Q++KM+V Y+++KQV+NGHELFPS V  KP+VE+HG
Sbjct: 1   MARI-SSDPLMVGRVIGDVVDNCLQAVKMTVTYNSDKQVYNGHELFPSVVTYKPKVEVHG 60

Query: 62  GDLRSFFTLIMTDPDVPGPSDPYLREHLHWIVTDIPGTTDATFGKEVISYENPRPNIGIH 121
           GD+RSFFTL+MTDPDVPGPSDPYLREHLHWIVTDIPGTTD +FGKE+I YE PRPNIGIH
Sbjct: 61  GDMRSFFTLVMTDPDVPGPSDPYLREHLHWIVTDIPGTTDVSFGKEIIGYEMPRPNIGIH 120

Query: 122 RFVFVLFKQTRRQSVIP-PSSRDGFNTRAFAADNNLGLPVAAVYFNAQRETAARRR 177
           RFV++LFKQTRR SV+  PS RD FNTR FA +N+LGLPVAAV+FN QRETAARRR
Sbjct: 121 RFVYLLFKQTRRGSVVSVPSYRDQFNTREFAHENDLGLPVAAVFFNCQRETAARRR 175

[Close]

BLAST of MS019538 vs. TAIR 10
Match: AT5G03840.1 (PEBP (phosphatidylethanolamine-binding protein) family protein )

HSP 1 Score: 270.0 bits (689), Expect = 1.3e-72
Identity = 128/169 (75.74%), Postives = 151/169 (89.35%), Query Frame = 0


Query: 9   EPLVVGRVIGDVLDFFSQSMKMSVFYSNNKQVFNGHELFPSAVAAKPRVEIHGGDLRSFF 68
           EPL++GRV+GDVLDFF+ + KM+V Y N KQV NGHELFPS+V++KPRVEIHGGDLRSFF
Sbjct: 10  EPLIMGRVVGDVLDFFTPTTKMNVSY-NKKQVSNGHELFPSSVSSKPRVEIHGGDLRSFF 69

Query: 69  TLIMTDPDVPGPSDPYLREHLHWIVTDIPGTTDATFGKEVISYENPRPNIGIHRFVFVLF 128
           TL+M DPDVPGPSDP+L+EHLHWIVT+IPGTTDATFGKEV+SYE PRP+IGIHRFVFVLF
Sbjct: 70  TLVMIDPDVPGPSDPFLKEHLHWIVTNIPGTTDATFGKEVVSYELPRPSIGIHRFVFVLF 129

Query: 129 KQTRRQSVIPP-SSRDGFNTRAFAADNNLGLPVAAVYFNAQRETAARRR 177
           +Q +R+ + P   SRD FNTR FA + +LGLPVAAV+FNAQRETAAR+R
Sbjct: 130 RQKQRRVIFPNIPSRDHFNTRKFAVEYDLGLPVAAVFFNAQRETAARKR 177

[Close]

BLAST of MS019538 vs. TAIR 10
Match: AT5G62040.1 (PEBP (phosphatidylethanolamine-binding protein) family protein )

HSP 1 Score: 229.2 bits (583), Expect = 2.6e-60
Identity = 110/169 (65.09%), Postives = 134/169 (79.29%), Query Frame = 0


Query: 9   EPLVVGRVIGDVLDFFSQSMKMSVFYSNNKQVFNGHELFPSAVAAKPRVEIHGGDLRSFF 68
           EPL+VGRVIGDVL+ F+ S+ M V +++N  V NGHEL PS + +KPRVEI G DLRSFF
Sbjct: 6   EPLIVGRVIGDVLEMFNPSVTMRVTFNSNTIVSNGHELAPSLLLSKPRVEIGGQDLRSFF 65

Query: 69  TLIMTDPDVPGPSDPYLREHLHWIVTDIPGTTDATFGKEVISYENPRPNIGIHRFVFVLF 128
           TLIM DPD P PS+PY+RE+LHW+VTDIPGTTDA+FG+E++ YE P+P  GIHR+VF LF
Sbjct: 66  TLIMMDPDAPSPSNPYMREYLHWMVTDIPGTTDASFGREIVRYETPKPVAGIHRYVFALF 125

Query: 129 KQTRRQSV-IPPSSRDGFNTRAFAADNNLGLPVAAVYFNAQRETAARRR 177
           KQ  RQ+V   P +R+ FNT AF++   L  PVAAVYFNAQRETA RRR
Sbjct: 126 KQRGRQAVKAAPETRECFNTNAFSSYFGLSQPVAAVYFNAQRETAPRRR 174

[Close]

BLAST of MS019538 vs. TAIR 10
Match: AT1G65480.1 (PEBP (phosphatidylethanolamine-binding protein) family protein )

HSP 1 Score: 208.8 bits (530), Expect = 3.6e-54
Identity = 99/168 (58.93%), Postives = 124/168 (73.81%), Query Frame = 0


Query: 9   EPLVVGRVIGDVLDFFSQSMKMSVFYSNNKQVFNGHELFPSAVAAKPRVEIHGGDLRSFF 68
           +PL+V RV+GDVLD F++S+ + V Y   ++V NG +L PS V  KPRVEI G DLR+F+
Sbjct: 7   DPLIVSRVVGDVLDPFNRSITLKVTY-GQREVTNGLDLRPSQVQNKPRVEIGGEDLRNFY 66

Query: 69  TLIMTDPDVPGPSDPYLREHLHWIVTDIPGTTDATFGKEVISYENPRPNIGIHRFVFVLF 128
           TL+M DPDVP PS+P+LRE+LHW+VTDIP TT  TFG E++ YENP P  GIHR VF+LF
Sbjct: 67  TLVMVDPDVPSPSNPHLREYLHWLVTDIPATTGTTFGNEIVCYENPSPTAGIHRVVFILF 126

Query: 129 KQTRRQSVIPPSSRDGFNTRAFAADNNLGLPVAAVYFNAQRETAARRR 177
           +Q  RQ+V  P  R  FNTR FA   NLGLPVAAV++N QRE+    R
Sbjct: 127 RQLGRQTVYAPGWRQNFNTREFAEIYNLGLPVAAVFYNCQRESGCGGR 173

[Close]

BLAST of MS019538 vs. TAIR 10
Match: AT4G20370.1 (PEBP (phosphatidylethanolamine-binding protein) family protein )

HSP 1 Score: 195.7 bits (496), Expect = 3.2e-50
Identity = 97/168 (57.74%), Postives = 118/168 (70.24%), Query Frame = 0


Query: 9   EPLVVGRVIGDVLDFFSQSMKMSVFYSNNKQVFNGHELFPSAVAAKPRVEIHGGDLRSFF 68
           +PLVVG V+GDVLD F++ + + V Y  +++V NG +L PS V  KP VEI G D R+F+
Sbjct: 7   DPLVVGSVVGDVLDPFTRLVSLKVTY-GHREVTNGLDLRPSQVLNKPIVEIGGDDFRNFY 66

Query: 69  TLIMTDPDVPGPSDPYLREHLHWIVTDIPGTTDATFGKEVISYENPRPNIGIHRFVFVLF 128
           TL+M DPDVP PS+P+ RE+LHW+VTDIP TT   FG EV+ YE+PRP  GIHR V VLF
Sbjct: 67  TLVMVDPDVPSPSNPHQREYLHWLVTDIPATTGNAFGNEVVCYESPRPPSGIHRIVLVLF 126

Query: 129 KQTRRQSVIPPSSRDGFNTRAFAADNNLGLPVAAVYFNAQRETAARRR 177
           +Q  RQ+V  P  R  FNTR FA   NLGLPVAA YFN QRE     R
Sbjct: 127 RQLGRQTVYAPGWRQQFNTREFAEIYNLGLPVAASYFNCQRENGCGGR 173

The following BLAST results are available for this feature:

BLAST of MS019538 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022144705.1	1.4e-95	100.00	protein CENTRORADIALIS-like [Momordica charantia]	[more]
NP_001267654.1	7.6e-86	91.81	protein SELF-PRUNING-like [Cucumis sativus] >KGN59123.1 hypothetical protein Csa...	[more]
XP_023528346.1	1.8e-79	86.29	protein SELF-PRUNING-like [Cucurbita pepo subsp. pepo]	[more]
KAG6580691.1	2.4e-79	86.29	Protein SELF-PRUNING, partial [Cucurbita argyrosperma subsp. sororia]	[more]
XP_022983119.1	4.0e-79	85.14	protein SELF-PRUNING-like [Cucurbita maxima]	[more]

BLAST of MS019538 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9ZNV5	2.8e-75	76.70	Protein CENTRORADIALIS-like OS=Arabidopsis thaliana OX=3702 GN=CEN PE=2 SV=1	[more]
Q9XH43	2.4e-74	75.29	CEN-like protein 2 OS=Nicotiana tabacum OX=4097 GN=CET2 PE=2 SV=1	[more]
Q41261	3.1e-74	74.03	Protein CENTRORADIALIS OS=Antirrhinum majus OX=4151 GN=CEN PE=1 SV=1	[more]
Q9XH42	4.5e-73	73.53	CEN-like protein 4 OS=Nicotiana tabacum OX=4097 GN=CET4 PE=2 SV=1	[more]
O82088	1.0e-72	74.56	Protein SELF-PRUNING OS=Solanum lycopersicum OX=4081 GN=SP PE=2 SV=1	[more]

BLAST of MS019538 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1CSD8	6.7e-96	100.00	protein CENTRORADIALIS-like OS=Momordica charantia OX=3673 GN=LOC111014329 PE=3 ...	[more]
B9ZYL2	3.7e-86	91.81	TFL1-like protein OS=Cucumis sativus OX=3659 GN=CsTFL1b PE=2 SV=1	[more]
A0A6J1J6E2	1.9e-79	85.14	protein SELF-PRUNING-like OS=Cucurbita maxima OX=3661 GN=LOC111481762 PE=3 SV=1	[more]
A0A6J1F9W4	4.3e-79	85.71	protein SELF-PRUNING-like OS=Cucurbita moschata OX=3662 GN=LOC111442134 PE=3 SV=...	[more]
A0A2N9H847	1.3e-78	83.43	Uncharacterized protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS35702 PE=3 SV=1	[more]

BLAST of MS019538 vs. TAIR 10


Match Name	E-value	Identity	Description
AT2G27550.1	2.0e-76	76.70	centroradialis	[more]
AT5G03840.1	1.3e-72	75.74	PEBP (phosphatidylethanolamine-binding protein) family protein	[more]
AT5G62040.1	2.6e-60	65.09	PEBP (phosphatidylethanolamine-binding protein) family protein	[more]
AT1G65480.1	3.6e-54	58.93	PEBP (phosphatidylethanolamine-binding protein) family protein	[more]
AT4G20370.1	3.2e-50	57.74	PEBP (phosphatidylethanolamine-binding protein) family protein	[more]

InterPro

Analysis Name: InterPro Annotations of Bitter gourd (TR) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR008914	Phosphatidylethanolamine-binding protein	PFAM	PF01161	PBP	coord: 55..165 e-value: 3.6E-14 score: 53.2
IPR036610	PEBP-like superfamily	GENE3D	3.90.280.10		coord: 3..176 e-value: 1.2E-57 score: 196.4
IPR036610	PEBP-like superfamily	SUPERFAMILY	49777	PEBP-like	coord: 15..170
IPR035810	Phosphatidylethanolamine-binding protein, eukaryotic	PANTHER	PTHR11362	PHOSPHATIDYLETHANOLAMINE-BINDING PROTEIN	coord: 5..175
IPR035810	Phosphatidylethanolamine-binding protein, eukaryotic	CDD	cd00866	PEBP_euk	coord: 28..167 e-value: 2.49712E-46 score: 147.135
IPR031114	TERMINAL FLOWER 1-like	PANTHER	PTHR11362:SF13	PROTEIN TERMINAL FLOWER 1	coord: 5..175
IPR001858	Phosphatidylethanolamine-binding, conserved site	PROSITE	PS01220	PBP	coord: 68..90

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
MS019538.1	MS019538.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0009910	negative regulation of flower development
molecular_function	GO:0003712	transcription coregulator activity