MS019472 (gene) Bitter gourd (TR) v1

Overview


Name	MS019472
Type	gene
Organism	Momordica charantia cv. TR (Bitter gourd (TR) v1)
Description	Protein GL2-INTERACTING REPRESSOR 1
Location	scaffold28: 759724 .. 760101 (-)
RNA-Seq Expression	MS019472
Synteny	MS019472

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGAGTCGGAGAAGCAATGGAAGTAGTGGTCCGAAGCTTGAGTTGAAGCTGAACCTGTCGCCGCCGCGGCCACACCCACTGGTGGAATCGCCGAGCCGGTCGGCGACGGTATCGCCGACATCGCCGCCGAGCTCGTGTGTGTCGTCGGAGCTAAACCAGGAGGAGGGCGGCGGCGCGGCGGCGCTCCGGTACTCGAGCAGCCCCGAGGCGACGTCGATGGTGCTGGTGGGCTGCCCGCGGTGCCTCATGTACGTGATGCTGTCGGAAAGTGACCCAAAATGCCCCAAATGCAAGAGCTCTGTTCTGCTTGATTTCCTCCACGATAGCACCGCCGCCGCCGCCGCATCTCCGCCGTCCACGGCCGCCGCCAGGAAGATC

mRNA sequence

ATGAGTCGGAGAAGCAATGGAAGTAGTGGTCCGAAGCTTGAGTTGAAGCTGAACCTGTCGCCGCCGCGGCCACACCCACTGGTGGAATCGCCGAGCCGGTCGGCGACGGTATCGCCGACATCGCCGCCGAGCTCGTGTGTGTCGTCGGAGCTAAACCAGGAGGAGGGCGGCGGCGCGGCGGCGCTCCGGTACTCGAGCAGCCCCGAGGCGACGTCGATGGTGCTGGTGGGCTGCCCGCGGTGCCTCATGTACGTGATGCTGTCGGAAAGTGACCCAAAATGCCCCAAATGCAAGAGCTCTGTTCTGCTTGATTTCCTCCACGATAGCACCGCCGCCGCCGCCGCATCTCCGCCGTCCACGGCCGCCGCCAGGAAGATC

Coding sequence (CDS)

ATGAGTCGGAGAAGCAATGGAAGTAGTGGTCCGAAGCTTGAGTTGAAGCTGAACCTGTCGCCGCCGCGGCCACACCCACTGGTGGAATCGCCGAGCCGGTCGGCGACGGTATCGCCGACATCGCCGCCGAGCTCGTGTGTGTCGTCGGAGCTAAACCAGGAGGAGGGCGGCGGCGCGGCGGCGCTCCGGTACTCGAGCAGCCCCGAGGCGACGTCGATGGTGCTGGTGGGCTGCCCGCGGTGCCTCATGTACGTGATGCTGTCGGAAAGTGACCCAAAATGCCCCAAATGCAAGAGCTCTGTTCTGCTTGATTTCCTCCACGATAGCACCGCCGCCGCCGCCGCATCTCCGCCGTCCACGGCCGCCGCCAGGAAGATC

Protein sequence

MSRRSNGSSGPKLELKLNLSPPRPHPLVESPSRSATVSPTSPPSSCVSSELNQEEGGGAAALRYSSSPEATSMVLVGCPRCLMYVMLSESDPKCPKCKSSVLLDFLHDSTAAAAASPPSTAAARKI

Homology

[Close]

BLAST of MS019472 vs. NCBI nr
Match: XP_008442891.1 (PREDICTED: uncharacterized protein LOC103486655 [Cucumis melo] >KAA0043838.1 uncharacterized protein E6C27_scaffold236G001730 [Cucumis melo var. makuwa] >TYK04712.1 uncharacterized protein E5676_scaffold23737G00010 [Cucumis melo var. makuwa])

HSP 1 Score: 198.7 bits (504), Expect = 2.9e-47
Identity = 109/126 (86.51%), Postives = 116/126 (92.06%), Query Frame = 0


Query: 1   MSRRSNGSSGPKLELKLNLSPPRPHPLVESPSRSATVSPTSPPSSCVSSELNQEEGGGAA 60
           MSRRS+GS  PKLELKLNLSPPRPHPLV SPSRSATVSPTSPPSSCVSSELNQ++GG  A
Sbjct: 1   MSRRSSGSV-PKLELKLNLSPPRPHPLVSSPSRSATVSPTSPPSSCVSSELNQDDGG--A 60

Query: 61  ALRYSSSPEATSMVLVGCPRCLMYVMLSESDPKCPKCKSSVLLDFLHDSTAAAAASPPST 120
           ALRYSSSPEATSMVLVGCPRCLMYVMLSE++PKCPKCKSSVLLDFLHD    AA++PPST
Sbjct: 61  ALRYSSSPEATSMVLVGCPRCLMYVMLSENEPKCPKCKSSVLLDFLHD---GAASAPPST 120

Query: 121 AAARKI 127
            AARKI
Sbjct: 121 TAARKI 120

[Close]

BLAST of MS019472 vs. NCBI nr
Match: XP_031737841.1 (uncharacterized protein LOC101204832 [Cucumis sativus] >KGN59178.1 hypothetical protein Csa_000798 [Cucumis sativus])

HSP 1 Score: 197.2 bits (500), Expect = 8.4e-47
Identity = 108/126 (85.71%), Postives = 115/126 (91.27%), Query Frame = 0


Query: 1   MSRRSNGSSGPKLELKLNLSPPRPHPLVESPSRSATVSPTSPPSSCVSSELNQEEGGGAA 60
           MSRRS+GS  PKLELKLNLSPPRPHPLV SPSRSATVSPTSPPSSCVSSELNQ++GG  A
Sbjct: 1   MSRRSSGSV-PKLELKLNLSPPRPHPLVSSPSRSATVSPTSPPSSCVSSELNQDDGG--A 60

Query: 61  ALRYSSSPEATSMVLVGCPRCLMYVMLSESDPKCPKCKSSVLLDFLHDSTAAAAASPPST 120
            LRYSSSPEATSMVLVGCPRCLMYVMLSE++PKCPKCKSSVLLDFLHD    AA++PPST
Sbjct: 61  GLRYSSSPEATSMVLVGCPRCLMYVMLSENEPKCPKCKSSVLLDFLHD---GAASAPPST 120

Query: 121 AAARKI 127
            AARKI
Sbjct: 121 TAARKI 120

[Close]

BLAST of MS019472 vs. NCBI nr
Match: XP_038905681.1 (uncharacterized protein LOC120091651 [Benincasa hispida])

HSP 1 Score: 195.3 bits (495), Expect = 3.2e-46
Identity = 107/126 (84.92%), Postives = 115/126 (91.27%), Query Frame = 0


Query: 1   MSRRSNGSSGPKLELKLNLSPPRPHPLVESPSRSATVSPTSPPSSCVSSELNQEEGGGAA 60
           MSRRS+GS  PKLELKLNLSPPRPHPL  SPSRSATVSPTSPPSSCVSSELNQ++GG  A
Sbjct: 1   MSRRSSGSV-PKLELKLNLSPPRPHPLASSPSRSATVSPTSPPSSCVSSELNQDDGG--A 60

Query: 61  ALRYSSSPEATSMVLVGCPRCLMYVMLSESDPKCPKCKSSVLLDFLHDSTAAAAASPPST 120
           +LRYSSSPEATSMVLVGCPRCLMYVMLSE++PKCPKCKSSVLLDFLHD    AA++PPS 
Sbjct: 61  SLRYSSSPEATSMVLVGCPRCLMYVMLSENEPKCPKCKSSVLLDFLHD---GAASAPPSR 120

Query: 121 AAARKI 127
           AAARKI
Sbjct: 121 AAARKI 120

[Close]

BLAST of MS019472 vs. NCBI nr
Match: XP_023005134.1 (uncharacterized protein LOC111498264 [Cucurbita maxima])

HSP 1 Score: 190.7 bits (483), Expect = 7.9e-45
Identity = 106/126 (84.13%), Postives = 110/126 (87.30%), Query Frame = 0


Query: 1   MSRRSNGSSGPKLELKLNLSPPRPHPLVESPSRSATVSPTSPPSSCVSSELNQEEGGGAA 60
           MSRRSNGS  PKLELKLNLSPPRPH L+ SPSRSATVSPTSPPSSCVS ELNQ++G    
Sbjct: 1   MSRRSNGSV-PKLELKLNLSPPRPHSLMSSPSRSATVSPTSPPSSCVSLELNQDDG---T 60

Query: 61  ALRYSSSPEATSMVLVGCPRCLMYVMLSESDPKCPKCKSSVLLDFLHDSTAAAAASPPST 120
           ALRYSSSPEATSMVLVGCPRCLMYVMLSE+DPKCPKCKSSVLLDFLHD    A A PPST
Sbjct: 61  ALRYSSSPEATSMVLVGCPRCLMYVMLSENDPKCPKCKSSVLLDFLHD--GGATAPPPST 120

Query: 121 AAARKI 127
           A ARKI
Sbjct: 121 AVARKI 120

[Close]

BLAST of MS019472 vs. NCBI nr
Match: KAG6596596.1 (Protein salt-induced and EIN3/EIL1-dependent 1, partial [Cucurbita argyrosperma subsp. sororia] >KAG7028133.1 hypothetical protein SDJN02_09313, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 188.0 bits (476), Expect = 5.1e-44
Identity = 105/126 (83.33%), Postives = 109/126 (86.51%), Query Frame = 0


Query: 1   MSRRSNGSSGPKLELKLNLSPPRPHPLVESPSRSATVSPTSPPSSCVSSELNQEEGGGAA 60
           MSRRSNGS  PKLELKLNLSPPR H L+ SPSRSATVSPTSPPSSCVS ELNQ++G    
Sbjct: 1   MSRRSNGSV-PKLELKLNLSPPRSHSLMSSPSRSATVSPTSPPSSCVSLELNQDDG---T 60

Query: 61  ALRYSSSPEATSMVLVGCPRCLMYVMLSESDPKCPKCKSSVLLDFLHDSTAAAAASPPST 120
            LRYSSSPEATSMVLVGCPRCLMYVMLSE+DPKCPKCKSSVLLDFLHD    A ASPPST
Sbjct: 61  TLRYSSSPEATSMVLVGCPRCLMYVMLSENDPKCPKCKSSVLLDFLHD--GGATASPPST 120

Query: 121 AAARKI 127
           A ARKI
Sbjct: 121 AVARKI 120

[Close]

BLAST of MS019472 vs. ExPASy Swiss-Prot
Match: Q9FNI1 (Protein GL2-INTERACTING REPRESSOR 1 OS=Arabidopsis thaliana OX=3702 GN=GIR1 PE=1 SV=1)

HSP 1 Score: 151.8 bits (382), Expect = 5.3e-36
Identity = 86/127 (67.72%), Postives = 99/127 (77.95%), Query Frame = 0


Query: 1   MSRRSNGSSGPKLELKLNLSPP--RPHPLVESPSRSATVSPTSPPSSCVSSELNQEEGGG 60
           MSRRS     PKLELKLNLSPP      +V SPSRSAT SPTSPPSSCVSSE+NQ+E   
Sbjct: 1   MSRRS-----PKLELKLNLSPPTSSQRRMVRSPSRSATTSPTSPPSSCVSSEMNQDE--- 60

Query: 61  AAALRYSSSPEATSMVLVGCPRCLMYVMLSESDPKCPKCKSSVLLDFLHDSTAAAAASPP 120
             ++RYS+SPE TSMVLVGCPRCLMYVMLSE DPKCPKCKS+VLLDFLH++   A A+  
Sbjct: 61  -PSVRYSTSPETTSMVLVGCPRCLMYVMLSEDDPKCPKCKSTVLLDFLHENATNANANAA 118

Query: 121 STAAARK 126
           + ++ RK
Sbjct: 121 AASSGRK 118

[Close]

BLAST of MS019472 vs. ExPASy Swiss-Prot
Match: Q9SRN4 (Protein GL2-INTERACTING REPRESSOR 2 OS=Arabidopsis thaliana OX=3702 GN=GIR2 PE=1 SV=1)

HSP 1 Score: 114.0 bits (284), Expect = 1.2e-24
Identity = 72/129 (55.81%), Postives = 84/129 (65.12%), Query Frame = 0


Query: 1   MSRRSNGSSGPKLELKLNLSPPRPH----PLVESPSRSATVSPTSPPSSCVSSELNQEEG 60
           MSRR+   +GPKLEL+LNLSPP        LV SP+RS T S    PSSCVSSE NQEE 
Sbjct: 1   MSRRN--KNGPKLELRLNLSPPPSQASQMSLVRSPNRSNTTS----PSSCVSSETNQEE- 60

Query: 61  GGAAALRYSSSPEATSMVLVGCPRCLMYVMLSESDPKCPKCKSSVLLDFLHDSTAAAAAS 120
                     +   TSMVLVGCPRCLMYVMLS+ DPKCPKCKS+VLLDFL ++  AA  +
Sbjct: 61  ----------NETITSMVLVGCPRCLMYVMLSDDDPKCPKCKSTVLLDFLQENAFAATTA 112

Query: 121 PPSTAAARK 126
             +    +K
Sbjct: 121 TAANTRRKK 112

[Close]

BLAST of MS019472 vs. ExPASy Swiss-Prot
Match: Q9FMS4 (Protein salt-induced and EIN3/EIL1-dependent 1 OS=Arabidopsis thaliana OX=3702 GN=SIED1 PE=1 SV=1)

HSP 1 Score: 65.5 bits (158), Expect = 5.0e-10
Identity = 41/95 (43.16%), Postives = 53/95 (55.79%), Query Frame = 0


Query: 13  LELKLNLSPPRPHPLVESPSRSATVSPTSPPSSCVSSELNQEEGGGAAALRYSSSPEATS 72
           L+LKLN+SP     L+   S S+  S              + EGGG          EA S
Sbjct: 11  LDLKLNISPSLDSSLLTESSSSSLCS-------------EEAEGGGG---------EAKS 70

Query: 73  MVLVGCPRCLMYVMLS-ESDPKCPKCKSSVLLDFL 107
           MV+VGCP C+MY++ S E+DP+CP+C S VLLDFL
Sbjct: 71  MVVVGCPNCIMYIITSLENDPRCPRCNSHVLLDFL 83

[Close]

BLAST of MS019472 vs. ExPASy TrEMBL
Match: A0A5A7TLW3 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold23737G00010 PE=4 SV=1)

HSP 1 Score: 198.7 bits (504), Expect = 1.4e-47
Identity = 109/126 (86.51%), Postives = 116/126 (92.06%), Query Frame = 0


Query: 1   MSRRSNGSSGPKLELKLNLSPPRPHPLVESPSRSATVSPTSPPSSCVSSELNQEEGGGAA 60
           MSRRS+GS  PKLELKLNLSPPRPHPLV SPSRSATVSPTSPPSSCVSSELNQ++GG  A
Sbjct: 1   MSRRSSGSV-PKLELKLNLSPPRPHPLVSSPSRSATVSPTSPPSSCVSSELNQDDGG--A 60

Query: 61  ALRYSSSPEATSMVLVGCPRCLMYVMLSESDPKCPKCKSSVLLDFLHDSTAAAAASPPST 120
           ALRYSSSPEATSMVLVGCPRCLMYVMLSE++PKCPKCKSSVLLDFLHD    AA++PPST
Sbjct: 61  ALRYSSSPEATSMVLVGCPRCLMYVMLSENEPKCPKCKSSVLLDFLHD---GAASAPPST 120

Query: 121 AAARKI 127
            AARKI
Sbjct: 121 TAARKI 120

[Close]

BLAST of MS019472 vs. ExPASy TrEMBL
Match: A0A1S3B7J8 (uncharacterized protein LOC103486655 OS=Cucumis melo OX=3656 GN=LOC103486655 PE=4 SV=1)

HSP 1 Score: 198.7 bits (504), Expect = 1.4e-47
Identity = 109/126 (86.51%), Postives = 116/126 (92.06%), Query Frame = 0


Query: 1   MSRRSNGSSGPKLELKLNLSPPRPHPLVESPSRSATVSPTSPPSSCVSSELNQEEGGGAA 60
           MSRRS+GS  PKLELKLNLSPPRPHPLV SPSRSATVSPTSPPSSCVSSELNQ++GG  A
Sbjct: 1   MSRRSSGSV-PKLELKLNLSPPRPHPLVSSPSRSATVSPTSPPSSCVSSELNQDDGG--A 60

Query: 61  ALRYSSSPEATSMVLVGCPRCLMYVMLSESDPKCPKCKSSVLLDFLHDSTAAAAASPPST 120
           ALRYSSSPEATSMVLVGCPRCLMYVMLSE++PKCPKCKSSVLLDFLHD    AA++PPST
Sbjct: 61  ALRYSSSPEATSMVLVGCPRCLMYVMLSENEPKCPKCKSSVLLDFLHD---GAASAPPST 120

Query: 121 AAARKI 127
            AARKI
Sbjct: 121 TAARKI 120

[Close]

BLAST of MS019472 vs. ExPASy TrEMBL
Match: A0A0A0LBI1 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G778340 PE=4 SV=1)

HSP 1 Score: 197.2 bits (500), Expect = 4.1e-47
Identity = 108/126 (85.71%), Postives = 115/126 (91.27%), Query Frame = 0


Query: 1   MSRRSNGSSGPKLELKLNLSPPRPHPLVESPSRSATVSPTSPPSSCVSSELNQEEGGGAA 60
           MSRRS+GS  PKLELKLNLSPPRPHPLV SPSRSATVSPTSPPSSCVSSELNQ++GG  A
Sbjct: 1   MSRRSSGSV-PKLELKLNLSPPRPHPLVSSPSRSATVSPTSPPSSCVSSELNQDDGG--A 60

Query: 61  ALRYSSSPEATSMVLVGCPRCLMYVMLSESDPKCPKCKSSVLLDFLHDSTAAAAASPPST 120
            LRYSSSPEATSMVLVGCPRCLMYVMLSE++PKCPKCKSSVLLDFLHD    AA++PPST
Sbjct: 61  GLRYSSSPEATSMVLVGCPRCLMYVMLSENEPKCPKCKSSVLLDFLHD---GAASAPPST 120

Query: 121 AAARKI 127
            AARKI
Sbjct: 121 TAARKI 120

[Close]

BLAST of MS019472 vs. ExPASy TrEMBL
Match: A0A6J1KYB2 (uncharacterized protein LOC111498264 OS=Cucurbita maxima OX=3661 GN=LOC111498264 PE=4 SV=1)

HSP 1 Score: 190.7 bits (483), Expect = 3.8e-45
Identity = 106/126 (84.13%), Postives = 110/126 (87.30%), Query Frame = 0


Query: 1   MSRRSNGSSGPKLELKLNLSPPRPHPLVESPSRSATVSPTSPPSSCVSSELNQEEGGGAA 60
           MSRRSNGS  PKLELKLNLSPPRPH L+ SPSRSATVSPTSPPSSCVS ELNQ++G    
Sbjct: 1   MSRRSNGSV-PKLELKLNLSPPRPHSLMSSPSRSATVSPTSPPSSCVSLELNQDDG---T 60

Query: 61  ALRYSSSPEATSMVLVGCPRCLMYVMLSESDPKCPKCKSSVLLDFLHDSTAAAAASPPST 120
           ALRYSSSPEATSMVLVGCPRCLMYVMLSE+DPKCPKCKSSVLLDFLHD    A A PPST
Sbjct: 61  ALRYSSSPEATSMVLVGCPRCLMYVMLSENDPKCPKCKSSVLLDFLHD--GGATAPPPST 120

Query: 121 AAARKI 127
           A ARKI
Sbjct: 121 AVARKI 120

[Close]

BLAST of MS019472 vs. ExPASy TrEMBL
Match: A0A6J1H2T2 (uncharacterized protein LOC111459550 OS=Cucurbita moschata OX=3662 GN=LOC111459550 PE=4 SV=1)

HSP 1 Score: 186.0 bits (471), Expect = 9.4e-44
Identity = 104/126 (82.54%), Postives = 109/126 (86.51%), Query Frame = 0


Query: 1   MSRRSNGSSGPKLELKLNLSPPRPHPLVESPSRSATVSPTSPPSSCVSSELNQEEGGGAA 60
           MSRRSNGS  PKLELKLNLSPP+ H L+ SPSRSATVSPTSPPSSCVS ELNQ++G    
Sbjct: 1   MSRRSNGSV-PKLELKLNLSPPQSHSLMSSPSRSATVSPTSPPSSCVSLELNQDDG---T 60

Query: 61  ALRYSSSPEATSMVLVGCPRCLMYVMLSESDPKCPKCKSSVLLDFLHDSTAAAAASPPST 120
           ALRYSSSPEATSMVLVGCPRCLMYVMLSE+DPKCPKCKSSVLLDFLHD    A A PPST
Sbjct: 61  ALRYSSSPEATSMVLVGCPRCLMYVMLSENDPKCPKCKSSVLLDFLHD--GGATAPPPST 120

Query: 121 AAARKI 127
           A ARKI
Sbjct: 121 AVARKI 120

[Close]

BLAST of MS019472 vs. TAIR 10
Match: AT5G06270.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 11 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G11600.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). )

HSP 1 Score: 151.8 bits (382), Expect = 3.8e-37
Identity = 86/127 (67.72%), Postives = 99/127 (77.95%), Query Frame = 0


Query: 1   MSRRSNGSSGPKLELKLNLSPP--RPHPLVESPSRSATVSPTSPPSSCVSSELNQEEGGG 60
           MSRRS     PKLELKLNLSPP      +V SPSRSAT SPTSPPSSCVSSE+NQ+E   
Sbjct: 1   MSRRS-----PKLELKLNLSPPTSSQRRMVRSPSRSATTSPTSPPSSCVSSEMNQDE--- 60

Query: 61  AAALRYSSSPEATSMVLVGCPRCLMYVMLSESDPKCPKCKSSVLLDFLHDSTAAAAASPP 120
             ++RYS+SPE TSMVLVGCPRCLMYVMLSE DPKCPKCKS+VLLDFLH++   A A+  
Sbjct: 61  -PSVRYSTSPETTSMVLVGCPRCLMYVMLSEDDPKCPKCKSTVLLDFLHENATNANANAA 118

Query: 121 STAAARK 126
           + ++ RK
Sbjct: 121 AASSGRK 118

[Close]

BLAST of MS019472 vs. TAIR 10
Match: AT3G11600.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: response to karrikin; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 12 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G06270.1); Has 171 Blast hits to 171 proteins in 15 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 171; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 114.0 bits (284), Expect = 8.8e-26
Identity = 72/129 (55.81%), Postives = 84/129 (65.12%), Query Frame = 0


Query: 1   MSRRSNGSSGPKLELKLNLSPPRPH----PLVESPSRSATVSPTSPPSSCVSSELNQEEG 60
           MSRR+   +GPKLEL+LNLSPP        LV SP+RS T S    PSSCVSSE NQEE 
Sbjct: 1   MSRRN--KNGPKLELRLNLSPPPSQASQMSLVRSPNRSNTTS----PSSCVSSETNQEE- 60

Query: 61  GGAAALRYSSSPEATSMVLVGCPRCLMYVMLSESDPKCPKCKSSVLLDFLHDSTAAAAAS 120
                     +   TSMVLVGCPRCLMYVMLS+ DPKCPKCKS+VLLDFL ++  AA  +
Sbjct: 61  ----------NETITSMVLVGCPRCLMYVMLSDDDPKCPKCKSTVLLDFLQENAFAATTA 112

Query: 121 PPSTAAARK 126
             +    +K
Sbjct: 121 TAANTRRKK 112

[Close]

BLAST of MS019472 vs. TAIR 10
Match: AT5G22270.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G11600.1); Has 136 Blast hits to 136 proteins in 15 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 136; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 65.5 bits (158), Expect = 3.6e-11
Identity = 41/95 (43.16%), Postives = 53/95 (55.79%), Query Frame = 0


Query: 13  LELKLNLSPPRPHPLVESPSRSATVSPTSPPSSCVSSELNQEEGGGAAALRYSSSPEATS 72
           L+LKLN+SP     L+   S S+  S              + EGGG          EA S
Sbjct: 11  LDLKLNISPSLDSSLLTESSSSSLCS-------------EEAEGGGG---------EAKS 70

Query: 73  MVLVGCPRCLMYVMLS-ESDPKCPKCKSSVLLDFL 107
           MV+VGCP C+MY++ S E+DP+CP+C S VLLDFL
Sbjct: 71  MVVVGCPNCIMYIITSLENDPRCPRCNSHVLLDFL 83

[Close]

BLAST of MS019472 vs. TAIR 10
Match: AT3G52561.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G11600.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). )

HSP 1 Score: 45.8 bits (107), Expect = 2.9e-05
Identity = 28/69 (40.58%), Postives = 40/69 (57.97%), Query Frame = 0


Query: 38  SPTSPPSSCVSSELNQ-EEGGGAAALRYSSSPEATSMVLVGCPRCLMYVMLSESDPKCPK 97
           SP+S  SS  +S L + EE     A  +    EA  MV++GC  C+MYVM+ +   +CPK
Sbjct: 31  SPSSDTSSSQNSCLTRTEEVKEEVASSWVDEEEAPEMVVMGCRSCMMYVMVLQERQRCPK 90

Query: 98  CKSSVLLDF 106
           CK + L+ F
Sbjct: 91  CKCTDLIFF 99

The following BLAST results are available for this feature:

BLAST of MS019472 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_008442891.1	2.9e-47	86.51	PREDICTED: uncharacterized protein LOC103486655 [Cucumis melo] >KAA0043838.1 unc...	[more]
XP_031737841.1	8.4e-47	85.71	uncharacterized protein LOC101204832 [Cucumis sativus] >KGN59178.1 hypothetical ...	[more]
XP_038905681.1	3.2e-46	84.92	uncharacterized protein LOC120091651 [Benincasa hispida]	[more]
XP_023005134.1	7.9e-45	84.13	uncharacterized protein LOC111498264 [Cucurbita maxima]	[more]
KAG6596596.1	5.1e-44	83.33	Protein salt-induced and EIN3/EIL1-dependent 1, partial [Cucurbita argyrosperma ...	[more]

BLAST of MS019472 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9FNI1	5.3e-36	67.72	Protein GL2-INTERACTING REPRESSOR 1 OS=Arabidopsis thaliana OX=3702 GN=GIR1 PE=1...	[more]
Q9SRN4	1.2e-24	55.81	Protein GL2-INTERACTING REPRESSOR 2 OS=Arabidopsis thaliana OX=3702 GN=GIR2 PE=1...	[more]
Q9FMS4	5.0e-10	43.16	Protein salt-induced and EIN3/EIL1-dependent 1 OS=Arabidopsis thaliana OX=3702 G...	[more]

BLAST of MS019472 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5A7TLW3	1.4e-47	86.51	Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold...	[more]
A0A1S3B7J8	1.4e-47	86.51	uncharacterized protein LOC103486655 OS=Cucumis melo OX=3656 GN=LOC103486655 PE=...	[more]
A0A0A0LBI1	4.1e-47	85.71	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G778340 PE=4 SV=1	[more]
A0A6J1KYB2	3.8e-45	84.13	uncharacterized protein LOC111498264 OS=Cucurbita maxima OX=3661 GN=LOC111498264...	[more]
A0A6J1H2T2	9.4e-44	82.54	uncharacterized protein LOC111459550 OS=Cucurbita moschata OX=3662 GN=LOC1114595...	[more]

BLAST of MS019472 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G06270.1	3.8e-37	67.72	unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic...	[more]
AT3G11600.1	8.8e-26	55.81	unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: response...	[more]
AT5G22270.1	3.6e-11	43.16	unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TA...	[more]
AT3G52561.1	2.9e-05	40.58	unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic...	[more]

InterPro

Analysis Name: InterPro Annotations of Bitter gourd (TR) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..59
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 31..52
None	No IPR available	PANTHER	PTHR33177:SF40	SUBFAMILY NOT NAMED	coord: 1..112
None	No IPR available	PANTHER	PTHR33177	PUTATIVE-RELATED	coord: 1..112

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
MS019472.1	MS019472.1	mRNA