MS019337 (gene) Bitter gourd (TR) v1

Overview


Name	MS019337
Type	gene
Organism	Momordica charantia cv. TR (Bitter gourd (TR) v1)
Description	outer envelope pore protein 16-2, chloroplastic
Location	scaffold611: 475176 .. 477506 (+)
RNA-Seq Expression	MS019337
Synteny	MS019337

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGGCAGTAGAAACCTTGAGAATCGTTCATTGGTTGATGAAATACGTAGCTTCGATAGCGGAGGTTTCTTGTACGACCTTGGCCATCCTCTTCTCAATCGCGTCGCCGAGAGCTTCATCAAGGCCGCCGGGGTTCGTAATCTTTCGTGATCCTATTTCTGTTAACCGCTTTGATAATCTTGATATGATCGTGCTGTATTTTACTTCAATGTGTGAATCTAAGACGTCTGTGGTACGTCGTACAGATTGGGGCATTGCAAGCTGTGTCTCGCGAGGCTTATTTTACGGCTGCGGAAAGTAAGATTCATTTCATCCAGTATTTCGATCCGATCCTTGCTTGATTTCACTTGAATTTCATCTCACGGTTAAACTCTGCTTCGATTTTGTTTCACTTTCATGTATCATGGCTTTTGTTTCCTCTGTCTTCCACGTTTAGGAGATGGTTGACGTAACCACTTCGATTTCACTCGAATTTCATCTCACATTTCAACTCTGCTTCGCTCTCGTGTCACTTTCATGTACTGTGGCTTTTTTGCTTTGTCTTACGCGTTTAGGAGATGGTTGATGTAAATTGGTTAACAAAAGTTTGTTATGCTTGGAAGAATACTATCATCTGTACGTGTTTGGGAGATTGTTGATGTAAATTGGTTAACAAAATTTTTTAATGCTTGGAAAAATTTTATCATCCGTACAGGTCTTGATTCGAACAGTGGAGTGCCGCCTGAACTATCGACTGCTAAAAAGCATCGTCTTCCAGGCCTTAAAGGTATTCGATCGATTCATCTTCCAAGTTGAGCTTTGTTTATCCTCAAGCAAAATCGTTCTTATGTCCGCCTGCTAGGTTTGATCCTTTTTCTGCCTGGTCGCTGGAAATTGTGTTCTACTAATTATATTCTTTCAGATTGATAGATGTGCATTATTTTGGGCTATAGTACGAGATGTGGATTCCAAATTTTTTATTTGATGATACAGACTAAAAATGAAGTGCCCCTTACGATTCTGTATAATTTGTGCAAAGGTCTGTAAGTTAGTTTTGTCCCATAGATATGATTGAAACCATATCTTTTTTTCTACGCCGTGCAGGTGAAACTAACAGAGTGTCTCTTGAAGCCATGGTGAGTGTTTGCAGCTGGTGGTCGAGTGTTACATTTGTGTGAATTATTTTCACTGGTATCGGTGGTCAGTAAAATGGCACTAATTTTAATTATTTTGCATTTTAAACGGTGTATGTCAGGTGAAGAACACGGGAAAAGAATCTCTGCAATGGGGTTAGTATTCCTCTTCTGAATTCTTGAATGCCAAACATCATTGCATTGCATCTCAAAAGATATTTCCTTTGCTTAAATACCTTTTTTTTTTAATCATGGGAAACGAATCCTTTGCTTAAATACCCTTGTTGTGTATGTTATGTTATCTCAAGTCACTAATTTGATCGATCATTCGGTTGCACACTTTGGATTTAGCTTATGTTATGTCCAAGTGCTTTGAAGGGAAACATTTCTTCTATAAGCACTTCTTGAAAGCTCACCCTAAGTTGATAGATCGGTTGATTGAGTTCTTGTTTTTGTTTTATTTTACCCACCACAGAATTTGGTGGGTTTTTAAGATCTGGAGTGAAATTTTTTGTGTTGGGTAACTAGTATACAAGTCTAGACATAAAGGGAGAGTAATACGATCTGAAAAAAAATGAACAATATTCTAATTTATGATTGAGTGGTGTGATTTAACTAATATGTTCTAATTTATCTTTTTTCTGGGTTGTAGGATTAGCTGCTGGAGTTTATTCTGGTCTTACCTACGGTTTAAGAGAGGCTCGTGGAGCACATGATTGGGTATATAATAACCCTTCCCTTCCGTAATTTACCAATAAATATTTGATGTTTTAGTTTAAACACTATTTTAGTCATGATTTTGTTTCATTTTTCGGTCTTCCTGTACTTCTTTACTTAATTCTGGTCCTTTTACTTACACCTTTTGTTTGGTTTAGTCCCTAGTACCCACAAAACGTCCATTTATTTGTAAAATTTTAACAATAAATAATATTAGAAGAGTTTAAAATTGAACTTAATTCAAAAGAGAGTTTGAACCTAATGTGTGTTGTGTGTGTGTGTGTGTGTTTTTTTTGTAAATGATTTAGAGGTTTTGTTGTTCTAGCCCTAAAACCATGAATCTGGATCAATTCCATTGCAGAAGAATAGTGCAATCGCAGGTGCAATCACGGGCGTGGCTTTGGCACTAACATCAGACGAGTCTTCTCACGAGCAGATCGTACAATGCGCCATCACCGGCGCTGCTGTTTCCACGGCTGCAAATATTTTTGCTGGCGTATTT

mRNA sequence

ATGGGCAGTAGAAACCTTGAGAATCGTTCATTGGTTGATGAAATACGTAGCTTCGATAGCGGAGGTTTCTTGTACGACCTTGGCCATCCTCTTCTCAATCGCGTCGCCGAGAGCTTCATCAAGGCCGCCGGGATTGGGGCATTGCAAGCTGTGTCTCGCGAGGCTTATTTTACGGCTGCGGAAAGTCTTGATTCGAACAGTGGAGTGCCGCCTGAACTATCGACTGCTAAAAAGCATCGTCTTCCAGGCCTTAAAGGTATTCGATCGATTCATCTTCCAAGATTAGCTGCTGGAGTTTATTCTGGTCTTACCTACGGTTTAAGAGAGGCTCGTGGAGCACATGATTGGAAGAATAGTGCAATCGCAGGTGCAATCACGGGCGTGGCTTTGGCACTAACATCAGACGAGTCTTCTCACGAGCAGATCGTACAATGCGCCATCACCGGCGCTGCTGTTTCCACGGCTGCAAATATTTTTGCTGGCGTATTT

Coding sequence (CDS)

ATGGGCAGTAGAAACCTTGAGAATCGTTCATTGGTTGATGAAATACGTAGCTTCGATAGCGGAGGTTTCTTGTACGACCTTGGCCATCCTCTTCTCAATCGCGTCGCCGAGAGCTTCATCAAGGCCGCCGGGATTGGGGCATTGCAAGCTGTGTCTCGCGAGGCTTATTTTACGGCTGCGGAAAGTCTTGATTCGAACAGTGGAGTGCCGCCTGAACTATCGACTGCTAAAAAGCATCGTCTTCCAGGCCTTAAAGGTATTCGATCGATTCATCTTCCAAGATTAGCTGCTGGAGTTTATTCTGGTCTTACCTACGGTTTAAGAGAGGCTCGTGGAGCACATGATTGGAAGAATAGTGCAATCGCAGGTGCAATCACGGGCGTGGCTTTGGCACTAACATCAGACGAGTCTTCTCACGAGCAGATCGTACAATGCGCCATCACCGGCGCTGCTGTTTCCACGGCTGCAAATATTTTTGCTGGCGTATTT

Protein sequence

MGSRNLENRSLVDEIRSFDSGGFLYDLGHPLLNRVAESFIKAAGIGALQAVSREAYFTAAESLDSNSGVPPELSTAKKHRLPGLKGIRSIHLPRLAAGVYSGLTYGLREARGAHDWKNSAIAGAITGVALALTSDESSHEQIVQCAITGAAVSTAANIFAGVF

Homology

[Close]

BLAST of MS019337 vs. NCBI nr
Match: XP_022138821.1 (outer envelope pore protein 16-2, chloroplastic [Momordica charantia])

HSP 1 Score: 287.7 bits (735), Expect = 6.1e-74
Identity = 156/177 (88.14%), Postives = 157/177 (88.70%), Query Frame = 0


Query: 1   MGSRNLENRSLVDEIRSFDSGGFLYDLGHPLLNRVAESFIKAAGIGALQAVSREAYFTAA 60
           MGSRNLENRSLVDEIRSFDSGGFLYDLGHPLLNRVAESFIKAAGIGALQAVSREAYFTAA
Sbjct: 1   MGSRNLENRSLVDEIRSFDSGGFLYDLGHPLLNRVAESFIKAAGIGALQAVSREAYFTAA 60

Query: 61  ESLDSNSGVPPELSTAKKHRLPGLKG-IRSIHLPR-------------LAAGVYSGLTYG 120
           ESLDSNSGVPPELSTAKKHRLPGLKG    + L               LAAGVYSGLTYG
Sbjct: 61  ESLDSNSGVPPELSTAKKHRLPGLKGETNRVSLEAMVKNTGKESLQWGLAAGVYSGLTYG 120

Query: 121 LREARGAHDWKNSAIAGAITGVALALTSDESSHEQIVQCAITGAAVSTAANIFAGVF 164
           LREARGAHDWKNSAIAGAITGVALALTSDESSHEQIVQCAITGAAVSTAANIFAGVF
Sbjct: 121 LREARGAHDWKNSAIAGAITGVALALTSDESSHEQIVQCAITGAAVSTAANIFAGVF 177

[Close]

BLAST of MS019337 vs. NCBI nr
Match: XP_008458360.1 (PREDICTED: outer envelope pore protein 16-2, chloroplastic [Cucumis melo])

HSP 1 Score: 238.4 bits (607), Expect = 4.3e-59
Identity = 128/177 (72.32%), Postives = 145/177 (81.92%), Query Frame = 0


Query: 1   MGSRNLENRSLVDEIRSFDSGGFLYDLGHPLLNRVAESFIKAAGIGALQAVSREAYFTAA 60
           MGSR+++N SLVDEIR   SG FLYDLGHPLLNRVA+SF+KAAGIGALQ+VSREAYFT A
Sbjct: 1   MGSRSIDNLSLVDEIRCTHSGPFLYDLGHPLLNRVADSFVKAAGIGALQSVSREAYFTVA 60

Query: 61  ESLDSNSGVPPELSTAKKHRLPGLKG----------IRSIHLPR----LAAGVYSGLTYG 120
            S+DSNS  PPELS+ +K R PGLKG          ++S+        LAAGVYSGLTYG
Sbjct: 61  GSVDSNSVPPPELSSIRKQRFPGLKGETNKESLEAMVKSVGKESIQWGLAAGVYSGLTYG 120

Query: 121 LREARGAHDWKNSAIAGAITGVALALTSDESSHEQIVQCAITGAAVSTAANIFAGVF 164
           L+EARGAHDWKNSAIAGA+TGVA+ALTSDESSHE IVQ AITGAA+STAANIFAG+F
Sbjct: 121 LKEARGAHDWKNSAIAGAVTGVAVALTSDESSHEHIVQYAITGAAMSTAANIFAGIF 177

[Close]

BLAST of MS019337 vs. NCBI nr
Match: XP_023514075.1 (outer envelope pore protein 16-2, chloroplastic-like isoform X2 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 237.3 bits (604), Expect = 9.5e-59
Identity = 126/177 (71.19%), Postives = 145/177 (81.92%), Query Frame = 0


Query: 1   MGSRNLENRSLVDEIRSFDSGGFLYDLGHPLLNRVAESFIKAAGIGALQAVSREAYFTAA 60
           MGSR+LENRS+VDEI+    G FLYD GHPLLNRVA+SFIKAAGIGALQ+VSREAYFT A
Sbjct: 1   MGSRSLENRSVVDEIKCSQGGTFLYDFGHPLLNRVADSFIKAAGIGALQSVSREAYFTVA 60

Query: 61  ESLDSNSGVPPELSTAKKHRLPGLKG----------IRSIHLPR----LAAGVYSGLTYG 120
            SLDS++G PPELS+A+K  +PGLKG          ++S+        LAAGVYSGLTYG
Sbjct: 61  GSLDSDNGPPPELSSARKRHVPGLKGETNKESLEAMVKSVGQESIQWGLAAGVYSGLTYG 120

Query: 121 LREARGAHDWKNSAIAGAITGVALALTSDESSHEQIVQCAITGAAVSTAANIFAGVF 164
           L+EARGAHDWKNSAIAGA+TGVA+AL SD+SSHE+IVQ AITGAAVS AANIFAG+F
Sbjct: 121 LKEARGAHDWKNSAIAGAVTGVAVALASDDSSHERIVQSAITGAAVSAAANIFAGIF 177

[Close]

BLAST of MS019337 vs. NCBI nr
Match: XP_023000594.1 (outer envelope pore protein 16-2, chloroplastic-like isoform X1 [Cucurbita maxima])

HSP 1 Score: 233.8 bits (595), Expect = 1.1e-57
Identity = 125/177 (70.62%), Postives = 144/177 (81.36%), Query Frame = 0


Query: 1   MGSRNLENRSLVDEIRSFDSGGFLYDLGHPLLNRVAESFIKAAGIGALQAVSREAYFTAA 60
           MGSR+LENRS+VDEI+    G FLYD GHPLLNRVA+SFIKAAGIGALQ+VSREAYFT A
Sbjct: 1   MGSRSLENRSMVDEIKCSQGGTFLYDFGHPLLNRVADSFIKAAGIGALQSVSREAYFTVA 60

Query: 61  ESLDSNSGVPPELSTAKKHRLPGLKG----------IRSIHLPR----LAAGVYSGLTYG 120
            SLDS++G P ELS+A+K  +PGLKG          ++S+        LAAGVYSGLTYG
Sbjct: 61  GSLDSSNGPPLELSSARKRHVPGLKGETNKESLEAMVKSVGQESIQWGLAAGVYSGLTYG 120

Query: 121 LREARGAHDWKNSAIAGAITGVALALTSDESSHEQIVQCAITGAAVSTAANIFAGVF 164
           L+EARGAHDWKNSAIAGA+TGVA+AL SD+SSHE+IVQ AITGAAVS AANIFAG+F
Sbjct: 121 LKEARGAHDWKNSAIAGAVTGVAVALASDDSSHERIVQSAITGAAVSAAANIFAGIF 177

[Close]

BLAST of MS019337 vs. NCBI nr
Match: TYK02947.1 (outer envelope pore protein 16-2 [Cucumis melo var. makuwa])

HSP 1 Score: 233.4 bits (594), Expect = 1.4e-57
Identity = 131/200 (65.50%), Postives = 148/200 (74.00%), Query Frame = 0


Query: 1   MGSRNLENRSLVDEIRSFDSGGFLYDLGHPLLNRVAESFIKAAGIGALQAVSREAYFTAA 60
           MGSR+++N SLVDEIR   SG FLYDLGHPLLNRVA+SF+KAAGIGALQ+VSREAYFT A
Sbjct: 1   MGSRSIDNLSLVDEIRCTHSGPFLYDLGHPLLNRVADSFVKAAGIGALQSVSREAYFTVA 60

Query: 61  ESLDSNSGVPPELSTAKKHRLPGLKG----------IRSI------------HL------ 120
            S+DSNS  PPELS+ +K R PGLKG          ++S+            HL      
Sbjct: 61  GSVDSNSVPPPELSSIRKQRFPGLKGETNKESLEAMVKSVGKESIQWGRYTGHLVECDLL 120

Query: 121 ---------PRLAAGVYSGLTYGLREARGAHDWKNSAIAGAITGVALALTSDESSHEQIV 164
                     RLAAGVYSGLTYGL+EARGAHDWKNSAIAGA+TGVA+ALTSDESSHE IV
Sbjct: 121 LSCPMLFANGRLAAGVYSGLTYGLKEARGAHDWKNSAIAGAVTGVAVALTSDESSHEHIV 180

[Close]

BLAST of MS019337 vs. ExPASy Swiss-Prot
Match: Q0WMZ5 (Outer envelope pore protein 16-2, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=OEP162 PE=2 SV=1)

HSP 1 Score: 178.3 bits (451), Expect = 6.9e-44
Identity = 99/173 (57.23%), Postives = 127/173 (73.41%), Query Frame = 0


Query: 9   RSLVDEIRSFDSGGFLYDLGHPLLNRVAESFIKAAGIGALQAVSREAYFTAAE--SLDSN 68
           R ++DEIRSF+    L+DLGHPLLNR+A+SF+KAAG+GALQAVSREAYFT  +    DSN
Sbjct: 7   RIVMDEIRSFEK-AHLFDLGHPLLNRIADSFVKAAGVGALQAVSREAYFTVVDGAGFDSN 66

Query: 69  S-GVPPELSTAKKHRLPGLKGIRSIHLPR-------------LAAGVYSGLTYGLREAR- 128
           + G P E++  KKHR P L+G  S  L               LAAG+YSG+TYG+ E R 
Sbjct: 67  NVGPPSEITGNKKHRFPNLRGESSKSLDALVKNTGKESLQWGLAAGLYSGITYGMTEVRG 126

Query: 129 GAHDWKNSAIAGAITGVALAL-TSDESSHEQIVQCAITGAAVSTAANIFAGVF 164
           GAHDW+NSA+AGA+TG A+A+ TS+ +SHEQ+VQ A+TGAA+STAAN+ + VF
Sbjct: 127 GAHDWRNSAVAGALTGAAMAMTTSERTSHEQVVQSALTGAAISTAANLLSSVF 178

[Close]

BLAST of MS019337 vs. ExPASy Swiss-Prot
Match: Q41050 (Outer envelope pore protein 16, chloroplastic OS=Pisum sativum OX=3888 GN=OEP16 PE=1 SV=1)

HSP 1 Score: 68.6 bits (166), Expect = 7.7e-11
Identity = 45/132 (34.09%), Postives = 68/132 (51.52%), Query Frame = 0


Query: 26  DLGHPLLNRVAESFIKAAGIGALQAVSREAYFTAAE-SLDSNSGVPPELSTAKKHRLPGL 85
           D+G+P LN   + F+K   + A ++V+ + +    + S+ SN     E S  K  +    
Sbjct: 20  DMGNPFLNLTVDGFLKIGAVAATRSVAEDTFHIIRKGSISSNDF---EKSLKKMCKEGAY 79

Query: 86  KGIRSIHLPRLAAGVYSGLTYGLREARGAHDWKNSAIAGAITGVALALTSDESSHEQIVQ 145
            G          AGVY G+ YG+   RG  DWKN+   GA+TG AL   +  +  ++I  
Sbjct: 80  WG--------AIAGVYVGMEYGVERIRGTRDWKNAMFGGAVTG-ALVSAASNNKKDKIAV 139

Query: 146 CAITGAAVSTAA 157
            AITGAA++TAA
Sbjct: 140 DAITGAAIATAA 139

[Close]

BLAST of MS019337 vs. ExPASy TrEMBL
Match: A0A6J1CAU6 (outer envelope pore protein 16-2, chloroplastic OS=Momordica charantia OX=3673 GN=LOC111009897 PE=4 SV=1)

HSP 1 Score: 287.7 bits (735), Expect = 3.0e-74
Identity = 156/177 (88.14%), Postives = 157/177 (88.70%), Query Frame = 0


Query: 1   MGSRNLENRSLVDEIRSFDSGGFLYDLGHPLLNRVAESFIKAAGIGALQAVSREAYFTAA 60
           MGSRNLENRSLVDEIRSFDSGGFLYDLGHPLLNRVAESFIKAAGIGALQAVSREAYFTAA
Sbjct: 1   MGSRNLENRSLVDEIRSFDSGGFLYDLGHPLLNRVAESFIKAAGIGALQAVSREAYFTAA 60

Query: 61  ESLDSNSGVPPELSTAKKHRLPGLKG-IRSIHLPR-------------LAAGVYSGLTYG 120
           ESLDSNSGVPPELSTAKKHRLPGLKG    + L               LAAGVYSGLTYG
Sbjct: 61  ESLDSNSGVPPELSTAKKHRLPGLKGETNRVSLEAMVKNTGKESLQWGLAAGVYSGLTYG 120

Query: 121 LREARGAHDWKNSAIAGAITGVALALTSDESSHEQIVQCAITGAAVSTAANIFAGVF 164
           LREARGAHDWKNSAIAGAITGVALALTSDESSHEQIVQCAITGAAVSTAANIFAGVF
Sbjct: 121 LREARGAHDWKNSAIAGAITGVALALTSDESSHEQIVQCAITGAAVSTAANIFAGVF 177

[Close]

BLAST of MS019337 vs. ExPASy TrEMBL
Match: A0A1S3C7N2 (outer envelope pore protein 16-2, chloroplastic OS=Cucumis melo OX=3656 GN=LOC103497794 PE=4 SV=1)

HSP 1 Score: 238.4 bits (607), Expect = 2.1e-59
Identity = 128/177 (72.32%), Postives = 145/177 (81.92%), Query Frame = 0


Query: 1   MGSRNLENRSLVDEIRSFDSGGFLYDLGHPLLNRVAESFIKAAGIGALQAVSREAYFTAA 60
           MGSR+++N SLVDEIR   SG FLYDLGHPLLNRVA+SF+KAAGIGALQ+VSREAYFT A
Sbjct: 1   MGSRSIDNLSLVDEIRCTHSGPFLYDLGHPLLNRVADSFVKAAGIGALQSVSREAYFTVA 60

Query: 61  ESLDSNSGVPPELSTAKKHRLPGLKG----------IRSIHLPR----LAAGVYSGLTYG 120
            S+DSNS  PPELS+ +K R PGLKG          ++S+        LAAGVYSGLTYG
Sbjct: 61  GSVDSNSVPPPELSSIRKQRFPGLKGETNKESLEAMVKSVGKESIQWGLAAGVYSGLTYG 120

Query: 121 LREARGAHDWKNSAIAGAITGVALALTSDESSHEQIVQCAITGAAVSTAANIFAGVF 164
           L+EARGAHDWKNSAIAGA+TGVA+ALTSDESSHE IVQ AITGAA+STAANIFAG+F
Sbjct: 121 LKEARGAHDWKNSAIAGAVTGVAVALTSDESSHEHIVQYAITGAAMSTAANIFAGIF 177

[Close]

BLAST of MS019337 vs. ExPASy TrEMBL
Match: A0A6J1KKF2 (outer envelope pore protein 16-2, chloroplastic-like isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC111494835 PE=4 SV=1)

HSP 1 Score: 233.8 bits (595), Expect = 5.1e-58
Identity = 125/177 (70.62%), Postives = 144/177 (81.36%), Query Frame = 0


Query: 1   MGSRNLENRSLVDEIRSFDSGGFLYDLGHPLLNRVAESFIKAAGIGALQAVSREAYFTAA 60
           MGSR+LENRS+VDEI+    G FLYD GHPLLNRVA+SFIKAAGIGALQ+VSREAYFT A
Sbjct: 1   MGSRSLENRSMVDEIKCSQGGTFLYDFGHPLLNRVADSFIKAAGIGALQSVSREAYFTVA 60

Query: 61  ESLDSNSGVPPELSTAKKHRLPGLKG----------IRSIHLPR----LAAGVYSGLTYG 120
            SLDS++G P ELS+A+K  +PGLKG          ++S+        LAAGVYSGLTYG
Sbjct: 61  GSLDSSNGPPLELSSARKRHVPGLKGETNKESLEAMVKSVGQESIQWGLAAGVYSGLTYG 120

Query: 121 LREARGAHDWKNSAIAGAITGVALALTSDESSHEQIVQCAITGAAVSTAANIFAGVF 164
           L+EARGAHDWKNSAIAGA+TGVA+AL SD+SSHE+IVQ AITGAAVS AANIFAG+F
Sbjct: 121 LKEARGAHDWKNSAIAGAVTGVAVALASDDSSHERIVQSAITGAAVSAAANIFAGIF 177

[Close]

BLAST of MS019337 vs. ExPASy TrEMBL
Match: A0A6P4AVZ1 (outer envelope pore protein 16-2, chloroplastic OS=Ziziphus jujuba OX=326968 GN=LOC107433250 PE=4 SV=1)

HSP 1 Score: 233.4 bits (594), Expect = 6.7e-58
Identity = 125/177 (70.62%), Postives = 143/177 (80.79%), Query Frame = 0


Query: 2   GSRNLENRSLVDEIRSFDSGGFLYDLGHPLLNRVAESFIKAAGIGALQAVSREAYFTAAE 61
           GS NLE R+L+DE+RSFD GGF +DLGHPLLNR+AESF+KAAGIGA+QAVSREAYFTA E
Sbjct: 6   GSGNLETRTLLDELRSFDKGGF-FDLGHPLLNRIAESFVKAAGIGAVQAVSREAYFTAFE 65

Query: 62  SLDSN-SGVPPELSTAKKHRLPGLKG----------IRSIHLPR----LAAGVYSGLTYG 121
             DSN S VPPE+S AKKHR P LKG          ++S         LAAGVYSGLTYG
Sbjct: 66  GFDSNGSSVPPEISGAKKHRFPDLKGETNRKSLEAMVKSTGKESLQWGLAAGVYSGLTYG 125

Query: 122 LREARGAHDWKNSAIAGAITGVALALTSDESSHEQIVQCAITGAAVSTAANIFAGVF 164
           L+EARGAHDWKNSA+AGAITGVALALT+++ SHEQIVQCAITGAA+STAAN+  G+F
Sbjct: 126 LKEARGAHDWKNSAVAGAITGVALALTTEDYSHEQIVQCAITGAAISTAANLLTGIF 181

[Close]

BLAST of MS019337 vs. ExPASy TrEMBL
Match: A0A5D3BTY5 (Outer envelope pore protein 16-2 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold46G00290 PE=4 SV=1)

HSP 1 Score: 233.4 bits (594), Expect = 6.7e-58
Identity = 131/200 (65.50%), Postives = 148/200 (74.00%), Query Frame = 0


Query: 1   MGSRNLENRSLVDEIRSFDSGGFLYDLGHPLLNRVAESFIKAAGIGALQAVSREAYFTAA 60
           MGSR+++N SLVDEIR   SG FLYDLGHPLLNRVA+SF+KAAGIGALQ+VSREAYFT A
Sbjct: 1   MGSRSIDNLSLVDEIRCTHSGPFLYDLGHPLLNRVADSFVKAAGIGALQSVSREAYFTVA 60

Query: 61  ESLDSNSGVPPELSTAKKHRLPGLKG----------IRSI------------HL------ 120
            S+DSNS  PPELS+ +K R PGLKG          ++S+            HL      
Sbjct: 61  GSVDSNSVPPPELSSIRKQRFPGLKGETNKESLEAMVKSVGKESIQWGRYTGHLVECDLL 120

Query: 121 ---------PRLAAGVYSGLTYGLREARGAHDWKNSAIAGAITGVALALTSDESSHEQIV 164
                     RLAAGVYSGLTYGL+EARGAHDWKNSAIAGA+TGVA+ALTSDESSHE IV
Sbjct: 121 LSCPMLFANGRLAAGVYSGLTYGLKEARGAHDWKNSAIAGAVTGVAVALTSDESSHEHIV 180

[Close]

BLAST of MS019337 vs. TAIR 10
Match: AT4G16160.1 (Mitochondrial import inner membrane translocase subunit Tim17/Tim22/Tim23 family protein )

HSP 1 Score: 183.3 bits (464), Expect = 1.5e-46
Identity = 99/171 (57.89%), Postives = 127/171 (74.27%), Query Frame = 0


Query: 9   RSLVDEIRSFDSGGFLYDLGHPLLNRVAESFIKAAGIGALQAVSREAYFTAAESLDSNS- 68
           R ++DEIRSF+    L+DLGHPLLNR+A+SF+KAAG+GALQAVSREAYFT  +  DSN+ 
Sbjct: 7   RIVMDEIRSFEK-AHLFDLGHPLLNRIADSFVKAAGVGALQAVSREAYFTVVDGFDSNNV 66

Query: 69  GVPPELSTAKKHRLPGLKGIRSIHLPR-------------LAAGVYSGLTYGLREAR-GA 128
           G P E++  KKHR P L+G  S  L               LAAG+YSG+TYG+ E R GA
Sbjct: 67  GPPSEITGNKKHRFPNLRGESSKSLDALVKNTGKESLQWGLAAGLYSGITYGMTEVRGGA 126

Query: 129 HDWKNSAIAGAITGVALAL-TSDESSHEQIVQCAITGAAVSTAANIFAGVF 164
           HDW+NSA+AGA+TG A+A+ TS+ +SHEQ+VQ A+TGAA+STAAN+ + VF
Sbjct: 127 HDWRNSAVAGALTGAAMAMTTSERTSHEQVVQSALTGAAISTAANLLSSVF 176

[Close]

BLAST of MS019337 vs. TAIR 10
Match: AT4G16160.2 (Mitochondrial import inner membrane translocase subunit Tim17/Tim22/Tim23 family protein )

HSP 1 Score: 178.3 bits (451), Expect = 4.9e-45
Identity = 99/173 (57.23%), Postives = 127/173 (73.41%), Query Frame = 0


Query: 9   RSLVDEIRSFDSGGFLYDLGHPLLNRVAESFIKAAGIGALQAVSREAYFTAAE--SLDSN 68
           R ++DEIRSF+    L+DLGHPLLNR+A+SF+KAAG+GALQAVSREAYFT  +    DSN
Sbjct: 7   RIVMDEIRSFEK-AHLFDLGHPLLNRIADSFVKAAGVGALQAVSREAYFTVVDGAGFDSN 66

Query: 69  S-GVPPELSTAKKHRLPGLKGIRSIHLPR-------------LAAGVYSGLTYGLREAR- 128
           + G P E++  KKHR P L+G  S  L               LAAG+YSG+TYG+ E R 
Sbjct: 67  NVGPPSEITGNKKHRFPNLRGESSKSLDALVKNTGKESLQWGLAAGLYSGITYGMTEVRG 126

Query: 129 GAHDWKNSAIAGAITGVALAL-TSDESSHEQIVQCAITGAAVSTAANIFAGVF 164
           GAHDW+NSA+AGA+TG A+A+ TS+ +SHEQ+VQ A+TGAA+STAAN+ + VF
Sbjct: 127 GAHDWRNSAVAGALTGAAMAMTTSERTSHEQVVQSALTGAAISTAANLLSSVF 178

The following BLAST results are available for this feature:

BLAST of MS019337 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022138821.1	6.1e-74	88.14	outer envelope pore protein 16-2, chloroplastic [Momordica charantia]	[more]
XP_008458360.1	4.3e-59	72.32	PREDICTED: outer envelope pore protein 16-2, chloroplastic [Cucumis melo]	[more]
XP_023514075.1	9.5e-59	71.19	outer envelope pore protein 16-2, chloroplastic-like isoform X2 [Cucurbita pepo ...	[more]
XP_023000594.1	1.1e-57	70.62	outer envelope pore protein 16-2, chloroplastic-like isoform X1 [Cucurbita maxim...	[more]
TYK02947.1	1.4e-57	65.50	outer envelope pore protein 16-2 [Cucumis melo var. makuwa]	[more]

BLAST of MS019337 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q0WMZ5	6.9e-44	57.23	Outer envelope pore protein 16-2, chloroplastic OS=Arabidopsis thaliana OX=3702 ...	[more]
Q41050	7.7e-11	34.09	Outer envelope pore protein 16, chloroplastic OS=Pisum sativum OX=3888 GN=OEP16 ...	[more]

BLAST of MS019337 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1CAU6	3.0e-74	88.14	outer envelope pore protein 16-2, chloroplastic OS=Momordica charantia OX=3673 G...	[more]
A0A1S3C7N2	2.1e-59	72.32	outer envelope pore protein 16-2, chloroplastic OS=Cucumis melo OX=3656 GN=LOC10...	[more]
A0A6J1KKF2	5.1e-58	70.62	outer envelope pore protein 16-2, chloroplastic-like isoform X1 OS=Cucurbita max...	[more]
A0A6P4AVZ1	6.7e-58	70.62	outer envelope pore protein 16-2, chloroplastic OS=Ziziphus jujuba OX=326968 GN=...	[more]
A0A5D3BTY5	6.7e-58	65.50	Outer envelope pore protein 16-2 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676...	[more]

BLAST of MS019337 vs. TAIR 10


Match Name	E-value	Identity	Description
AT4G16160.1	1.5e-46	57.89	Mitochondrial import inner membrane translocase subunit Tim17/Tim22/Tim23 family...	[more]
AT4G16160.2	4.9e-45	57.23	Mitochondrial import inner membrane translocase subunit Tim17/Tim22/Tim23 family...	[more]

InterPro

Analysis Name: InterPro Annotations of Bitter gourd (TR) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PFAM	PF02466	Tim17	coord: 32..153 e-value: 4.7E-11 score: 43.1
None	No IPR available	PANTHER	PTHR15371:SF1	OUTER ENVELOPE PORE PROTEIN 16-2, CHLOROPLASTIC	coord: 4..163
None	No IPR available	PANTHER	PTHR15371	TIM23	coord: 4..163

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
MS019337.1	MS019337.1	mRNA