MS019288 (gene) Bitter gourd (TR) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATGTCTAGCAAATCCCCTGTTTTCCCCTTCCCCGAGCCCCAGCACTTCAGCGACTACGGCTTCGACCCCCAAATCGACTATTTTCAGGTTCATTTTCCCTTCCTTTTTCTTCTAAACAAATTTCTCGATTCCATTGATTCGACTGGATTTTGTTTTTGTTTTAGGTTTTGGAAGAGGCTCGGAAGCACAAACGCGAGTCTTCAAGATCCATAGACTCCATTCATTTCAAGCTCCAAAAGCCCATTTCCAAAGACGAAACCAGTAAGAACAAGAAGAAGAAGAAGCAGCGGTGGTGGAAAAACGCTCTCCTCTTCTTCAAATGGAACCGGATCCAACAAACCCTCCGAAACGACGCCGTTTCCGAGGACGTTCACCGGGCCAGAGCCAGAGCCTTCCGCGCCTCCGTCTCCGGTCCGGTTTACATTACCGAGAGCCAGAGCGGGTCCAGCACGCCGTACCGGTCCACCACCCGCCCCTCCTCCGGCCCGCTCGCCGGAATCCCTTACCTCAGCCTCCGGGAACTCAACATGGAGCAGCAGCAATACAGAATGTCCACGTCAGCGCCCATGCCCATTTACTTGGTCACC ATGTCTAGCAAATCCCCTGTTTTCCCCTTCCCCGAGCCCCAGCACTTCAGCGACTACGGCTTCGACCCCCAAATCGACTATTTTCAGGTTTTGGAAGAGGCTCGGAAGCACAAACGCGAGTCTTCAAGATCCATAGACTCCATTCATTTCAAGCTCCAAAAGCCCATTTCCAAAGACGAAACCAGTAAGAACAAGAAGAAGAAGAAGCAGCGGTGGTGGAAAAACGCTCTCCTCTTCTTCAAATGGAACCGGATCCAACAAACCCTCCGAAACGACGCCGTTTCCGAGGACGTTCACCGGGCCAGAGCCAGAGCCTTCCGCGCCTCCGTCTCCGGTCCGGTTTACATTACCGAGAGCCAGAGCGGGTCCAGCACGCCGTACCGGTCCACCACCCGCCCCTCCTCCGGCCCGCTCGCCGGAATCCCTTACCTCAGCCTCCGGGAACTCAACATGGAGCAGCAGCAATACAGAATGTCCACGTCAGCGCCCATGCCCATTTACTTGGTCACC ATGTCTAGCAAATCCCCTGTTTTCCCCTTCCCCGAGCCCCAGCACTTCAGCGACTACGGCTTCGACCCCCAAATCGACTATTTTCAGGTTTTGGAAGAGGCTCGGAAGCACAAACGCGAGTCTTCAAGATCCATAGACTCCATTCATTTCAAGCTCCAAAAGCCCATTTCCAAAGACGAAACCAGTAAGAACAAGAAGAAGAAGAAGCAGCGGTGGTGGAAAAACGCTCTCCTCTTCTTCAAATGGAACCGGATCCAACAAACCCTCCGAAACGACGCCGTTTCCGAGGACGTTCACCGGGCCAGAGCCAGAGCCTTCCGCGCCTCCGTCTCCGGTCCGGTTTACATTACCGAGAGCCAGAGCGGGTCCAGCACGCCGTACCGGTCCACCACCCGCCCCTCCTCCGGCCCGCTCGCCGGAATCCCTTACCTCAGCCTCCGGGAACTCAACATGGAGCAGCAGCAATACAGAATGTCCACGTCAGCGCCCATGCCCATTTACTTGGTCACC MSSKSPVFPFPEPQHFSDYGFDPQIDYFQVLEEARKHKRESSRSIDSIHFKLQKPISKDETSKNKKKKKQRWWKNALLFFKWNRIQQTLRNDAVSEDVHRARARAFRASVSGPVYITESQSGSSTPYRSTTRPSSGPLAGIPYLSLRELNMEQQQYRMSTSAPMPIYLVT Homology
BLAST of MS019288 vs. NCBI nr
Match: XP_022138689.1 (uncharacterized protein LOC111009787 [Momordica charantia]) HSP 1 Score: 337.0 bits (863), Expect = 9.2e-89 Identity = 170/170 (100.00%), Postives = 170/170 (100.00%), Query Frame = 0
BLAST of MS019288 vs. NCBI nr
Match: XP_038875477.1 (uncharacterized protein LOC120067919 [Benincasa hispida]) HSP 1 Score: 274.6 bits (701), Expect = 5.6e-70 Identity = 146/184 (79.35%), Postives = 158/184 (85.87%), Query Frame = 0
BLAST of MS019288 vs. NCBI nr
Match: XP_008458411.1 (PREDICTED: uncharacterized protein LOC103497835 [Cucumis melo]) HSP 1 Score: 271.2 bits (692), Expect = 6.2e-69 Identity = 144/185 (77.84%), Postives = 158/185 (85.41%), Query Frame = 0
BLAST of MS019288 vs. NCBI nr
Match: XP_004150497.1 (uncharacterized protein LOC101220317 [Cucumis sativus] >KGN47425.1 hypothetical protein Csa_021720 [Cucumis sativus]) HSP 1 Score: 268.5 bits (685), Expect = 4.0e-68 Identity = 142/186 (76.34%), Postives = 157/186 (84.41%), Query Frame = 0
BLAST of MS019288 vs. NCBI nr
Match: KAG6593981.1 (hypothetical protein SDJN03_13457, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 268.5 bits (685), Expect = 4.0e-68 Identity = 143/184 (77.72%), Postives = 156/184 (84.78%), Query Frame = 0
BLAST of MS019288 vs. ExPASy TrEMBL
Match: A0A6J1CAT6 (uncharacterized protein LOC111009787 OS=Momordica charantia OX=3673 GN=LOC111009787 PE=4 SV=1) HSP 1 Score: 337.0 bits (863), Expect = 4.5e-89 Identity = 170/170 (100.00%), Postives = 170/170 (100.00%), Query Frame = 0
BLAST of MS019288 vs. ExPASy TrEMBL
Match: A0A1S3C7T3 (uncharacterized protein LOC103497835 OS=Cucumis melo OX=3656 GN=LOC103497835 PE=4 SV=1) HSP 1 Score: 271.2 bits (692), Expect = 3.0e-69 Identity = 144/185 (77.84%), Postives = 158/185 (85.41%), Query Frame = 0
BLAST of MS019288 vs. ExPASy TrEMBL
Match: A0A0A0KCH6 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G319710 PE=4 SV=1) HSP 1 Score: 268.5 bits (685), Expect = 1.9e-68 Identity = 142/186 (76.34%), Postives = 157/186 (84.41%), Query Frame = 0
BLAST of MS019288 vs. ExPASy TrEMBL
Match: A0A6J1KJ37 (uncharacterized protein LOC111494438 OS=Cucurbita maxima OX=3661 GN=LOC111494438 PE=4 SV=1) HSP 1 Score: 266.5 bits (680), Expect = 7.4e-68 Identity = 144/184 (78.26%), Postives = 154/184 (83.70%), Query Frame = 0
BLAST of MS019288 vs. ExPASy TrEMBL
Match: A0A6J1EQ93 (uncharacterized protein LOC111436831 OS=Cucurbita moschata OX=3662 GN=LOC111436831 PE=4 SV=1) HSP 1 Score: 265.4 bits (677), Expect = 1.6e-67 Identity = 142/184 (77.17%), Postives = 154/184 (83.70%), Query Frame = 0
BLAST of MS019288 vs. TAIR 10
Match: AT5G49170.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G06840.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). ) HSP 1 Score: 171.0 bits (432), Expect = 8.1e-43 Identity = 113/194 (58.25%), Postives = 132/194 (68.04%), Query Frame = 0
BLAST of MS019288 vs. TAIR 10
Match: AT3G06840.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G49170.1); Has 33 Blast hits to 33 proteins in 9 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 33; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). ) HSP 1 Score: 164.9 bits (416), Expect = 5.8e-41 Identity = 108/194 (55.67%), Postives = 129/194 (66.49%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Bitter gourd (TR) v1
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
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