MS019178 (gene) Bitter gourd (TR) v1

Overview


Name	MS019178
Type	gene
Organism	Momordica charantia cv. TR (Bitter gourd (TR) v1)
Description	Elongator complex protein 5
Location	scaffold20: 2310149 .. 2314135 (-)
RNA-Seq Expression	MS019178
Synteny	MS019178

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCGGAATCTATTTGCAGAGCACTTAGGGACGGCGCGTTGGAGGGAGAGCTTGCCCCTGCTCTCACTATAAAGGACTCCATGGATTCGCCATTCGGTTTTCACGCCTTTGCTCACCTTCTTGCGCAGCTCTCCATCAATATCTTGGCGGGTAAATCGCAGTCTCGGTTAGTTCAATTCCCTTGTAGAGGAAGTCATTTAGGGAATTGAAATTGTTTAGCTTCGGCGGTCGTTTTGATTTTTCTTTCCTGGTTTGATTTTGATCTCAGGGGCCTCGTTCTACTCGCGTTCTCTCGAAGTCCGGCTTATTATGTCGACCTGTTGAAGAAGAGAGGAGTTGATGTTGGGTCGTCTGATAAGTGGTAAAGTTATCTCTGCAAATTCTTACATCGTTGCTTCCTTTAACAGTTCAATCAAGGAAATAAACCCTTTTTAATTTAGTTAAGAAGGTGGTTTTTTTTTTCTAAGAGGTTTAATTCCTTTTTTTTTCCTCGAAGATTAATGCCATGCGGGAACAAGTACAGCAAATATTTCCTTCATTTAGTTGATTGCCTGCAGAGAACTTAATTTTGTTAATGTCAAAGAAATAAGAGCAAATGCAAAGGAGGCTCGTTGACATAAAATTTATTAAATTGCTTTGTCATGTGATATGAGATAATCTAAACAGCGTTAGTTCTTGCAGTCTCAAAAGAATGAGGGTCCTGACACTCGAATTATAATGGCTGGTTGACTTTGATGCAATTGAATATAGTATTAAATTACTATATGCAAATGATTAAGTGGATCCATCAATATTAATATTAAGTGAAGCTGCCAGTTCGTCCAACCTATTTGGATTCGTTTCTTTGAGGTCTTTGGGGGTTTCTTTGGCTCTTAATAGGAGAAGTGTAGGACGATGATGGAGGAGGTGTTGCTCTACCCGTTTTGGCATAGAGGAAGGCTGTTGTGGTAGGCTTATTTTTTTATTTTTTTATTTTACTATTTTGTGGGGTGTTTGGCTTGAGAGGAATAGCAGAATTTTTAAAAGGATCAGGCCGTGGGAGGAAGTTTGGAAAATTATTAGATTTAATTCCTCCTTTAGGGTGTCGTCGGTTTTGAAGGATTTTTATAATTATCAGTTAGATGTTATTCTTTTTGATTGAGACCCCTTCTTTTATGCCGGTCTCCTTTTGTCATGGTTTTTTTGTATGTCCTTTTTGTACCTTCTTTCATTTTCTTTCGAATCTTGCCACGAAAGCTCGGTATCTTAATAAATAAATAAATAAATAAATAAATAAATAAATAAATAAATAACTATATATATATATTAAGTGGAGTGGAAATGACACTACTAACAACCTTTGTTCCTTACCATGAGGGACACAATGTGTGTCCTTGATATTCTTCAGCTTAACTTGAATTTATAATGGAAAAGACTAGCACTCTTTCATATTTCATATTTCGTATAAATTATTTCTCTTATTTTTCTTGTTATTTTTGAATCAAGTTCATTTAACTATATTTGTGTTATAGGATTCAAATTTTGGACTGTTATACAGATCCTCTTGGTTGGAAAGAACGGTTAATGGAGGGTGAAAAAGTTTCAAATGTTCACCAAGAAGTTTCATCTTTATCTAATCTTTGTACAAATATGAGGGATATGGATAAACTATTCTCCTCGATTGTTGCACTTGGAAAAGGTATGACTATAATCTTAATTGAGAGTATAGCAGTGGAGATCTATAGTGATTTTGGTCTTATTTTGCAAGGAAAAGTTTACGATTTAAATTTTAATGTTCTAGCAGGATTTGTTGGAGAAGGAACTGTACGCTTTTGTGTTGCCATAGATTCTGTATGTTCTTTCTCTCTTTCATGACATGTGACATGTCATGTTTTGAATGTGTAATGAACCTATTGTTAGTACTATCTATGAGCAGACTTGAGTTTCACATTTTTTTAACCGTCCTGCTAATTTCTTTTCTTGTGCATATCATTTATTAAATGTAATTAAAAATATAAAACTGTCAAGGAGGATTCTCCTTTCTCAACAGAATATTTATTTTCTCCCGCATATTACTTATTAAATATAATTTATATTAATACTATCAAATTGTTAAGGAGTGCTCTTCTTTCTAGGTTTTGCATTGAATATCGATACTTCCTTTCTTGGTTGAGACGTGGGGGCATGAAATATGTATAATAAACAATGTGAATTGTCTGTTGAGTCTTTTCGTTTTTAGTTCAGTGCAATTCAGATTCCATAGGGATAAGTTTGGCTTGTCCTGTACATTTTTGCTCTTTTCTTGATTTCCATTCATTACTAACCTGAATGTTGTTACTTTTATTTTTTCGTTTTGACGCATTGTTTTGAAATTTTACTAGGTAACTGATATGTTGAGACATTCATCTACATCAGCAGTTGCAGGTCTTTTAAGCAGCCTTCGGAGCAATGGTATGAATAAGATATATTGCCTTTCAAATTTTTGCTGCTGAAATAAATCTAATCTCATGAGTTGTGATTGATATTTCTTCACTTGATAGCTCTTATTCTGAACGATCCAGTTTTAATTCTTGTTACACGATTTTAGATAAGGTTTCAAGTACATTTTGGTTGGTACATGAAGATCTTCATGAGGAAAGGGTGATAGCTGCTCTTGAATATATGTCCTCCATTGTGGCATCAGTTGAGCCATCGACTCCATCCCCATATGTGCATATAGGCAATCTGGACAACTCCTATCCCGAACACAACTCTACAAATGGGAGGTTTCATGTGCGCTTTAAACGCAGAAATGGACGTGTCCGAATCATTGTAAATTCTCTACTCTTAGCACTTTTGGTATTTACATGTGAAACTGTTGGTTAACCACATATTCTTGATGTTCTATTCTTAGTGTGAAGATTTCAAAGTTGAGCACTCAGGCATCATCAAATTTACGTCCATTTTATCTGAAGATGCAATCATCAATCAAGGACTTATTCCAAAGGTCGGTTTATCTTGATTTTGAACCCTCAGTGTTTCCCGAAAATTGATTCCCCAAAATTTTAGATTTATCAAACTTGAGATTTGTAGTAAAAGGAATCATATTGTCTATATATATCATATGCATGACAAATCTATTTTGTAGATATATAATATGTAATGATTCTATAGTACATCAGTGTATAAATAAAATAGTTTTTTTAGATAAAAATATGTGAGATGTTGATTTGCAATTACAACATTTCATATGAAAATATTAGATTTGTATAGGTATGTTTTATTCGTCCATGAACGGTTTGATAGTTCGATAGGATGCTGAAACTTGATTGACATGTGTATGCGTAGGTTGCTCCACATAGTTTTTCTTGCATGGGTTGTGAAGAACTTAAATTTGTTCTGGTTCTAAAAGTTTAGATGCACAAATAATGGGAGTTATTTTTGTGGAAATTCTCTCTTCCCCCTTTTTGTTTTGGGGGATCACTTGCACATCTTATGGTTTACTTTTATTTCTGATACGCCCGATCTTTCCGAACTACTACTATAGCTATTGAAACATTTTTTTTCATAAATTTGCATAAATAAAGAACTGGTGAATGGATATTCTTTCTTCTTTCAGGTCCATTTCAATCTACAGTTGTCAGAGAAAGAGCTAATGGACAGGGCAAAAGTTGTTCTTCCTTTTGAGCATCAAGGTTCGGATTCTCAATGCTCTATCTTTGAATACTACAAAACGATTTTGACTTGAGTTGATCTATTATCCAGATGGTTAACTCCTGACCCTGCTGTTCTTTCTTGCTTACGGTTTTCTCTTCATGATGTTCGGTTTTATTATAGGAAATGGCAAACCGATACAAATATACGACGGTCGAAGATCTCTTACCGAAAGCAAAGAAGACGACAAACCCCTCCTGACCAGTGAGAAAGGCAAGGATGAAGGATCAGGAAAGGGTGAGATCGTATATTTCCGCGATTCAGATGATGAGAGGCCAGATTCTGATGAAGACCCAGACGAGGATTTAGACATA

mRNA sequence

ATGGCGGAATCTATTTGCAGAGCACTTAGGGACGGCGCGTTGGAGGGAGAGCTTGCCCCTGCTCTCACTATAAAGGACTCCATGGATTCGCCATTCGGTTTTCACGCCTTTGCTCACCTTCTTGCGCAGCTCTCCATCAATATCTTGGCGGGTAAATCGCAGTCTCGGGGCCTCGTTCTACTCGCGTTCTCTCGAAGTCCGGCTTATTATGTCGACCTGTTGAAGAAGAGAGGAGTTGATGTTGGGTCGTCTGATAAGTGGATTCAAATTTTGGACTGTTATACAGATCCTCTTGGTTGGAAAGAACGGTTAATGGAGGGTGAAAAAGTTTCAAATGTTCACCAAGAAGTTTCATCTTTATCTAATCTTTGTACAAATATGAGGGATATGGATAAACTATTCTCCTCGATTGTTGCACTTGGAAAAGCAGGATTTGTTGGAGAAGGAACTGTACGCTTTTGTGTTGCCATAGATTCTGTAACTGATATGTTGAGACATTCATCTACATCAGCAGTTGCAGGTCTTTTAAGCAGCCTTCGGAGCAATGATAAGGTTTCAAGTACATTTTGGTTGGTACATGAAGATCTTCATGAGGAAAGGGTGATAGCTGCTCTTGAATATATGTCCTCCATTGTGGCATCAGTTGAGCCATCGACTCCATCCCCATATGTGCATATAGGCAATCTGGACAACTCCTATCCCGAACACAACTCTACAAATGGGAGGTTTCATGTGCGCTTTAAACGCAGAAATGGACGTGTCCGAATCATTTGTGAAGATTTCAAAGTTGAGCACTCAGGCATCATCAAATTTACGTCCATTTTATCTGAAGATGCAATCATCAATCAAGGACTTATTCCAAAGGTCCATTTCAATCTACAGTTGTCAGAGAAAGAGCTAATGGACAGGGCAAAAGTTGTTCTTCCTTTTGAGCATCAAGGAAATGGCAAACCGATACAAATATACGACGGTCGAAGATCTCTTACCGAAAGCAAAGAAGACGACAAACCCCTCCTGACCAGTGAGAAAGGCAAGGATGAAGGATCAGGAAAGGGTGAGATCGTATATTTCCGCGATTCAGATGATGAGAGGCCAGATTCTGATGAAGACCCAGACGAGGATTTAGACATA

Coding sequence (CDS)

ATGGCGGAATCTATTTGCAGAGCACTTAGGGACGGCGCGTTGGAGGGAGAGCTTGCCCCTGCTCTCACTATAAAGGACTCCATGGATTCGCCATTCGGTTTTCACGCCTTTGCTCACCTTCTTGCGCAGCTCTCCATCAATATCTTGGCGGGTAAATCGCAGTCTCGGGGCCTCGTTCTACTCGCGTTCTCTCGAAGTCCGGCTTATTATGTCGACCTGTTGAAGAAGAGAGGAGTTGATGTTGGGTCGTCTGATAAGTGGATTCAAATTTTGGACTGTTATACAGATCCTCTTGGTTGGAAAGAACGGTTAATGGAGGGTGAAAAAGTTTCAAATGTTCACCAAGAAGTTTCATCTTTATCTAATCTTTGTACAAATATGAGGGATATGGATAAACTATTCTCCTCGATTGTTGCACTTGGAAAAGCAGGATTTGTTGGAGAAGGAACTGTACGCTTTTGTGTTGCCATAGATTCTGTAACTGATATGTTGAGACATTCATCTACATCAGCAGTTGCAGGTCTTTTAAGCAGCCTTCGGAGCAATGATAAGGTTTCAAGTACATTTTGGTTGGTACATGAAGATCTTCATGAGGAAAGGGTGATAGCTGCTCTTGAATATATGTCCTCCATTGTGGCATCAGTTGAGCCATCGACTCCATCCCCATATGTGCATATAGGCAATCTGGACAACTCCTATCCCGAACACAACTCTACAAATGGGAGGTTTCATGTGCGCTTTAAACGCAGAAATGGACGTGTCCGAATCATTTGTGAAGATTTCAAAGTTGAGCACTCAGGCATCATCAAATTTACGTCCATTTTATCTGAAGATGCAATCATCAATCAAGGACTTATTCCAAAGGTCCATTTCAATCTACAGTTGTCAGAGAAAGAGCTAATGGACAGGGCAAAAGTTGTTCTTCCTTTTGAGCATCAAGGAAATGGCAAACCGATACAAATATACGACGGTCGAAGATCTCTTACCGAAAGCAAAGAAGACGACAAACCCCTCCTGACCAGTGAGAAAGGCAAGGATGAAGGATCAGGAAAGGGTGAGATCGTATATTTCCGCGATTCAGATGATGAGAGGCCAGATTCTGATGAAGACCCAGACGAGGATTTAGACATA

Protein sequence

MAESICRALRDGALEGELAPALTIKDSMDSPFGFHAFAHLLAQLSINILAGKSQSRGLVLLAFSRSPAYYVDLLKKRGVDVGSSDKWIQILDCYTDPLGWKERLMEGEKVSNVHQEVSSLSNLCTNMRDMDKLFSSIVALGKAGFVGEGTVRFCVAIDSVTDMLRHSSTSAVAGLLSSLRSNDKVSSTFWLVHEDLHEERVIAALEYMSSIVASVEPSTPSPYVHIGNLDNSYPEHNSTNGRFHVRFKRRNGRVRIICEDFKVEHSGIIKFTSILSEDAIINQGLIPKVHFNLQLSEKELMDRAKVVLPFEHQGNGKPIQIYDGRRSLTESKEDDKPLLTSEKGKDEGSGKGEIVYFRDSDDERPDSDEDPDEDLDI

Homology

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BLAST of MS019178 vs. NCBI nr
Match: XP_022143441.1 (elongator complex protein 5 isoform X1 [Momordica charantia])

HSP 1 Score: 736.5 bits (1900), Expect = 1.2e-208
Identity = 375/377 (99.47%), Postives = 376/377 (99.73%), Query Frame = 0


Query: 1   MAESICRALRDGALEGELAPALTIKDSMDSPFGFHAFAHLLAQLSINILAGKSQSRGLVL 60
           MAESICRALRDGALEGELAPALTIKDSMDSPFGFHAFAHLLAQLSINILAGKSQSRGLVL
Sbjct: 1   MAESICRALRDGALEGELAPALTIKDSMDSPFGFHAFAHLLAQLSINILAGKSQSRGLVL 60

Query: 61  LAFSRSPAYYVDLLKKRGVDVGSSDKWIQILDCYTDPLGWKERLMEGEKVSNVHQEVSSL 120
           LAFSRSPAYYVDLLKKRGVDVGSSDKWIQILDCYTDPLGWKERLMEGEKVSNVHQEVSSL
Sbjct: 61  LAFSRSPAYYVDLLKKRGVDVGSSDKWIQILDCYTDPLGWKERLMEGEKVSNVHQEVSSL 120

Query: 121 SNLCTNMRDMDKLFSSIVALGKAGFVGEGTVRFCVAIDSVTDMLRHSSTSAVAGLLSSLR 180
           SNLCTN+RDMDKLFSSIVALGKAGFVGEGTVRFCVAIDSVTDMLRHSSTSAVAGLLSSLR
Sbjct: 121 SNLCTNVRDMDKLFSSIVALGKAGFVGEGTVRFCVAIDSVTDMLRHSSTSAVAGLLSSLR 180

Query: 181 SNDKVSSTFWLVHEDLHEERVIAALEYMSSIVASVEPSTPSPYVHIGNLDNSYPEHNSTN 240
           SNDKVSSTFWLVHEDLHEERVIAALEYMSSIVASVEPSTPSPYVH GNLDNSYPEHNSTN
Sbjct: 181 SNDKVSSTFWLVHEDLHEERVIAALEYMSSIVASVEPSTPSPYVHRGNLDNSYPEHNSTN 240

Query: 241 GRFHVRFKRRNGRVRIICEDFKVEHSGIIKFTSILSEDAIINQGLIPKVHFNLQLSEKEL 300
           GRFHVRFKRRNGRVRIICEDFKVEHSGIIKFTSILSEDAIINQGLIPKVHFNLQLSEKEL
Sbjct: 241 GRFHVRFKRRNGRVRIICEDFKVEHSGIIKFTSILSEDAIINQGLIPKVHFNLQLSEKEL 300

Query: 301 MDRAKVVLPFEHQGNGKPIQIYDGRRSLTESKEDDKPLLTSEKGKDEGSGKGEIVYFRDS 360
           MDRAKVVLPFEHQGNGKPIQIYDGRRSLTESKEDDKPLLTSEKGKDEGSGKGEIVYFRDS
Sbjct: 301 MDRAKVVLPFEHQGNGKPIQIYDGRRSLTESKEDDKPLLTSEKGKDEGSGKGEIVYFRDS 360

Query: 361 DDERPDSDEDPDEDLDI 378
           DDERPDSDEDPDEDLDI
Sbjct: 361 DDERPDSDEDPDEDLDI 377

[Close]

BLAST of MS019178 vs. NCBI nr
Match: XP_022143442.1 (elongator complex protein 5 isoform X2 [Momordica charantia])

HSP 1 Score: 730.3 bits (1884), Expect = 8.3e-207
Identity = 374/377 (99.20%), Postives = 375/377 (99.47%), Query Frame = 0


Query: 1   MAESICRALRDGALEGELAPALTIKDSMDSPFGFHAFAHLLAQLSINILAGKSQSRGLVL 60
           MAESICRALRDGALEGELAPALTIKDSMDSPFGFHAFAHLLAQLSINILAGKSQSRGLVL
Sbjct: 1   MAESICRALRDGALEGELAPALTIKDSMDSPFGFHAFAHLLAQLSINILAGKSQSRGLVL 60

Query: 61  LAFSRSPAYYVDLLKKRGVDVGSSDKWIQILDCYTDPLGWKERLMEGEKVSNVHQEVSSL 120
           LAFSRSPAYYVDLLKKRGVDVGSSDKWIQILDCYTDPLGWKERLMEGEKVSNVHQEVSSL
Sbjct: 61  LAFSRSPAYYVDLLKKRGVDVGSSDKWIQILDCYTDPLGWKERLMEGEKVSNVHQEVSSL 120

Query: 121 SNLCTNMRDMDKLFSSIVALGKAGFVGEGTVRFCVAIDSVTDMLRHSSTSAVAGLLSSLR 180
           SNLCTN+RDMDKLFSSIVALGK GFVGEGTVRFCVAIDSVTDMLRHSSTSAVAGLLSSLR
Sbjct: 121 SNLCTNVRDMDKLFSSIVALGK-GFVGEGTVRFCVAIDSVTDMLRHSSTSAVAGLLSSLR 180

Query: 181 SNDKVSSTFWLVHEDLHEERVIAALEYMSSIVASVEPSTPSPYVHIGNLDNSYPEHNSTN 240
           SNDKVSSTFWLVHEDLHEERVIAALEYMSSIVASVEPSTPSPYVH GNLDNSYPEHNSTN
Sbjct: 181 SNDKVSSTFWLVHEDLHEERVIAALEYMSSIVASVEPSTPSPYVHRGNLDNSYPEHNSTN 240

Query: 241 GRFHVRFKRRNGRVRIICEDFKVEHSGIIKFTSILSEDAIINQGLIPKVHFNLQLSEKEL 300
           GRFHVRFKRRNGRVRIICEDFKVEHSGIIKFTSILSEDAIINQGLIPKVHFNLQLSEKEL
Sbjct: 241 GRFHVRFKRRNGRVRIICEDFKVEHSGIIKFTSILSEDAIINQGLIPKVHFNLQLSEKEL 300

Query: 301 MDRAKVVLPFEHQGNGKPIQIYDGRRSLTESKEDDKPLLTSEKGKDEGSGKGEIVYFRDS 360
           MDRAKVVLPFEHQGNGKPIQIYDGRRSLTESKEDDKPLLTSEKGKDEGSGKGEIVYFRDS
Sbjct: 301 MDRAKVVLPFEHQGNGKPIQIYDGRRSLTESKEDDKPLLTSEKGKDEGSGKGEIVYFRDS 360

Query: 361 DDERPDSDEDPDEDLDI 378
           DDERPDSDEDPDEDLDI
Sbjct: 361 DDERPDSDEDPDEDLDI 376

[Close]

BLAST of MS019178 vs. NCBI nr
Match: XP_022948560.1 (elongator complex protein 5 isoform X1 [Cucurbita moschata])

HSP 1 Score: 632.1 bits (1629), Expect = 3.1e-177
Identity = 316/377 (83.82%), Postives = 350/377 (92.84%), Query Frame = 0


Query: 1   MAESICRALRDGALEGELAPALTIKDSMDSPFGFHAFAHLLAQLSINILAGKSQSRGLVL 60
           MA+SICRALRDGALEGELAPALT+KDS++SPFGFHAFAH+L QLS NILAGKSQSRGLVL
Sbjct: 1   MADSICRALRDGALEGELAPALTLKDSINSPFGFHAFAHVLMQLSSNILAGKSQSRGLVL 60

Query: 61  LAFSRSPAYYVDLLKKRGVDVGSSDKWIQILDCYTDPLGWKERLMEGEKVSNVHQEVSSL 120
           LAFSRSPAYY++LLKK GV+VGSS+KWIQILDCYTDPLGWKER   GEK+SNVHQEVS+L
Sbjct: 61  LAFSRSPAYYLELLKKSGVNVGSSEKWIQILDCYTDPLGWKERFTGGEKISNVHQEVSNL 120

Query: 121 SNLCTNMRDMDKLFSSIVALGKAGFVGEGTVRFCVAIDSVTDMLRHSSTSAVAGLLSSLR 180
           S+LCTN+RDMD LFSSI+ LGKAGFVGEGTVRFCVA+DSVTDMLRHSSTSAVAGLLS+LR
Sbjct: 121 SHLCTNVRDMDNLFSSIITLGKAGFVGEGTVRFCVAVDSVTDMLRHSSTSAVAGLLSNLR 180

Query: 181 SNDKVSSTFWLVHEDLHEERVIAALEYMSSIVASVEPSTPSPYVHIGNLDNSYPEHNSTN 240
           SNDKVSSTFWLVHEDLHEE+VIAALEYMSS+VA+VEP TPSPYV   +L+  Y EH+ST 
Sbjct: 181 SNDKVSSTFWLVHEDLHEEKVIAALEYMSSMVATVEPLTPSPYVRESSLNTPYLEHSSTK 240

Query: 241 GRFHVRFKRRNGRVRIICEDFKVEHSGIIKFTSILSEDAIINQGLIPKVHFNLQLSEKEL 300
           GRFHVR KRRNGRVR+ICE+FKVE SG IKFTSI SEDA++NQGL+PKV FNLQLSEKE 
Sbjct: 241 GRFHVRIKRRNGRVRVICENFKVEQSG-IKFTSISSEDAVVNQGLVPKVQFNLQLSEKEQ 300

Query: 301 MDRAKVVLPFEHQGNGKPIQIYDGRRSLTESKEDDKPLLTSEKGKDEGSGKGEIVYFRDS 360
           +DRA+VVLPFEHQGNGKPIQIYDGRRSLTESK+DDKPL T+EK KDE  GKGEI+YFRDS
Sbjct: 301 IDRARVVLPFEHQGNGKPIQIYDGRRSLTESKDDDKPLSTNEKSKDEEPGKGEIIYFRDS 360

Query: 361 DDERPDSDEDPDEDLDI 378
           +DE PDSDEDPD+DLDI
Sbjct: 361 EDEMPDSDEDPDDDLDI 376

[Close]

BLAST of MS019178 vs. NCBI nr
Match: KAG6607058.1 (Elongator complex protein 5, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 631.7 bits (1628), Expect = 4.0e-177
Identity = 319/377 (84.62%), Postives = 350/377 (92.84%), Query Frame = 0


Query: 1   MAESICRALRDGALEGELAPALTIKDSMDSPFGFHAFAHLLAQLSINILAGKSQSRGLVL 60
           MA+SICRALRDGALEGELAPALT+KDS++SPFGFHAFAH+L QLS NILAGKSQSRGLVL
Sbjct: 1   MADSICRALRDGALEGELAPALTLKDSINSPFGFHAFAHVLLQLSSNILAGKSQSRGLVL 60

Query: 61  LAFSRSPAYYVDLLKKRGVDVGSSDKWIQILDCYTDPLGWKERLMEGEKVSNVHQEVSSL 120
           LAFSRSPAYY++LLKK GV+VGSS+KWIQILDCYTDPLGWKER   GEK SNVHQEVS+L
Sbjct: 61  LAFSRSPAYYLELLKKSGVNVGSSEKWIQILDCYTDPLGWKERFTGGEKFSNVHQEVSNL 120

Query: 121 SNLCTNMRDMDKLFSSIVALGKAGFVGEGTVRFCVAIDSVTDMLRHSSTSAVAGLLSSLR 180
           S+LCTN+RDMD LFSSI+ LGK GFVGEGTVRFCVAIDSVTDMLRHSSTSAVAGLLS+LR
Sbjct: 121 SHLCTNVRDMDNLFSSIITLGK-GFVGEGTVRFCVAIDSVTDMLRHSSTSAVAGLLSNLR 180

Query: 181 SNDKVSSTFWLVHEDLHEERVIAALEYMSSIVASVEPSTPSPYVHIGNLDNSYPEHNSTN 240
           SNDKVSSTFWLVHEDLHEE+VIAALEYMSS+VA+VEP TPSPYV   NL+  Y EH+ST 
Sbjct: 181 SNDKVSSTFWLVHEDLHEEKVIAALEYMSSMVATVEPLTPSPYVRESNLNTPYLEHSSTK 240

Query: 241 GRFHVRFKRRNGRVRIICEDFKVEHSGIIKFTSILSEDAIINQGLIPKVHFNLQLSEKEL 300
           GRFHVR KRRNGRVR+ICE+FKVE SG IKFTSI SEDA++NQGL+PKV FNLQLSEKE 
Sbjct: 241 GRFHVRIKRRNGRVRVICENFKVEQSG-IKFTSISSEDAVVNQGLVPKVQFNLQLSEKEQ 300

Query: 301 MDRAKVVLPFEHQGNGKPIQIYDGRRSLTESKEDDKPLLTSEKGKDEGSGKGEIVYFRDS 360
           +DRA+VVLPFEHQGNGKPIQIYDGRRSLTESK+DDKPL TSEK KDEG+GKGEI+YFRDS
Sbjct: 301 IDRARVVLPFEHQGNGKPIQIYDGRRSLTESKDDDKPLSTSEKSKDEGAGKGEIIYFRDS 360

Query: 361 DDERPDSDEDPDEDLDI 378
           +DE PDSDEDPD+DLDI
Sbjct: 361 EDEMPDSDEDPDDDLDI 375

[Close]

BLAST of MS019178 vs. NCBI nr
Match: XP_022998086.1 (elongator complex protein 5 isoform X1 [Cucurbita maxima])

HSP 1 Score: 630.9 bits (1626), Expect = 6.8e-177
Identity = 316/377 (83.82%), Postives = 350/377 (92.84%), Query Frame = 0


Query: 1   MAESICRALRDGALEGELAPALTIKDSMDSPFGFHAFAHLLAQLSINILAGKSQSRGLVL 60
           MA+SICRALRDGALEGELAPALT+KDS++SPFGFHAFAH+L QLS NILAGKSQSRGLVL
Sbjct: 1   MADSICRALRDGALEGELAPALTLKDSINSPFGFHAFAHVLMQLSSNILAGKSQSRGLVL 60

Query: 61  LAFSRSPAYYVDLLKKRGVDVGSSDKWIQILDCYTDPLGWKERLMEGEKVSNVHQEVSSL 120
           LAFSRSPAYY++LLKK G +VGSS+KWIQILDCYTDPLGWKER   GEK+SNVHQEVS+L
Sbjct: 61  LAFSRSPAYYLELLKKSGGNVGSSEKWIQILDCYTDPLGWKERFTGGEKISNVHQEVSNL 120

Query: 121 SNLCTNMRDMDKLFSSIVALGKAGFVGEGTVRFCVAIDSVTDMLRHSSTSAVAGLLSSLR 180
           S+LCTN+RDMD LFSSI+ LGKAGFVGEGTVRFCVAIDSVTDMLRHSSTSAVAGLLS+ R
Sbjct: 121 SHLCTNVRDMDNLFSSIITLGKAGFVGEGTVRFCVAIDSVTDMLRHSSTSAVAGLLSNFR 180

Query: 181 SNDKVSSTFWLVHEDLHEERVIAALEYMSSIVASVEPSTPSPYVHIGNLDNSYPEHNSTN 240
           SNDKVSSTFWLVHEDLHEE+VIAALEYMSS+VA+VEP TPSPYV   +L+  Y EH+ST 
Sbjct: 181 SNDKVSSTFWLVHEDLHEEKVIAALEYMSSMVATVEPLTPSPYVCESSLNTPYLEHSSTK 240

Query: 241 GRFHVRFKRRNGRVRIICEDFKVEHSGIIKFTSILSEDAIINQGLIPKVHFNLQLSEKEL 300
           GRFHVR KRRNGRVR+ICE+FKVE SG IKFTSI SEDA++NQGL+PKV FNLQLSEKE 
Sbjct: 241 GRFHVRIKRRNGRVRVICENFKVEQSG-IKFTSISSEDAVVNQGLVPKVQFNLQLSEKEQ 300

Query: 301 MDRAKVVLPFEHQGNGKPIQIYDGRRSLTESKEDDKPLLTSEKGKDEGSGKGEIVYFRDS 360
           +DRA+VVLPFEHQGNGKPIQIYDGRRSLT+SK+DDKPL TSEK KDEG+GKGEI+YFRDS
Sbjct: 301 IDRARVVLPFEHQGNGKPIQIYDGRRSLTDSKDDDKPLSTSEKSKDEGAGKGEIIYFRDS 360

Query: 361 DDERPDSDEDPDEDLDI 378
           +DE PDSDEDPD+DLDI
Sbjct: 361 EDEMPDSDEDPDDDLDI 376

[Close]

BLAST of MS019178 vs. ExPASy Swiss-Prot
Match: F4IQJ2 (Elongator complex protein 5 OS=Arabidopsis thaliana OX=3702 GN=ELP5 PE=1 SV=1)

HSP 1 Score: 373.2 bits (957), Expect = 3.4e-102
Identity = 211/382 (55.24%), Postives = 270/382 (70.68%), Query Frame = 0


Query: 1   MAESICRALRDGALEGELAPALTIKDSMDSPFGFHAFAHLLAQLSINILAGKSQSRGLVL 60
           MAESI R LRDG  EGELAPALTI++++ SPFG     +LL  LS +ILAGKS S+GLVL
Sbjct: 1   MAESIFRKLRDGGEEGELAPALTIEETVASPFGLDVSGYLLTNLSSSILAGKSSSQGLVL 60

Query: 61  LAFSRSPAYYVDLLKKRGVDVGSSDKWIQILDCYTDPLGWKERLMEGEKVSNVHQEVSSL 120
           + FSRSP++Y+ LLK++G+ V SS KWI+ILDCYTDPLGW       ++ S    E SSL
Sbjct: 61  ITFSRSPSFYLQLLKQKGIVVSSSSKWIRILDCYTDPLGWI------DQSSTSFSEGSSL 120

Query: 121 SNLCTNMRDMDKLFSSIVALGKAGFVGEGTVRFCVAIDSVTDMLRHSSTSAVAGLLSSLR 180
             L   + D+ KLFSSI+  G+   VG G  RFCVAIDSV ++LRHS+   V+GLL+ LR
Sbjct: 121 IKLHKCVSDLKKLFSSIIEAGRE-LVGTGKTRFCVAIDSVNELLRHSAMPLVSGLLTDLR 180

Query: 181 SNDKVSSTFWLVHEDLHEERVIAALEYMSSIVASVEPSTPSPYVHIGNLDNSYPEHNS-T 240
           S+ ++SS FW ++ DLH+E+V  ALEY+S++ A++EP  PS       L+N +  H    
Sbjct: 181 SHAQISSVFWSLNTDLHQEKVTNALEYISTMKANLEPLCPSSDGQRNALENLFSVHQDFG 240

Query: 241 NGRFHVRFKRRNGRVRIICEDFKVEHSGIIKFTSILSEDAII--NQGLIPKVHFNLQLSE 300
            GRFHVRFK R GRVR++ E++ V+ SG I F+ I S D +I   + L+PKV FNLQLSE
Sbjct: 241 KGRFHVRFKLRKGRVRVMSEEYHVDQSG-INFSPISSVDTVIAATKSLLPKVQFNLQLSE 300

Query: 301 KELMDRAKVVLPFEHQGNGKPIQIYDGRRSLTESKEDDKPLLTSEKGKD-EGSGK-GEIV 360
           KE +++ KVVLPFEHQ +GK  +IYDGRRSL + K +  PL + E   D   SGK GEI+
Sbjct: 301 KERVEKEKVVLPFEHQDDGKSNEIYDGRRSLVDGKIETTPLSSMELQTDVVSSGKGGEII 360

Query: 361 YFRDSDDERPDSDEDPDEDLDI 378
           YFRDSDDE PDSDEDPD+DLDI
Sbjct: 361 YFRDSDDEHPDSDEDPDDDLDI 374

[Close]

BLAST of MS019178 vs. ExPASy TrEMBL
Match: A0A6J1CQ94 (Elongator complex protein 5 OS=Momordica charantia OX=3673 GN=LOC111013317 PE=3 SV=1)

HSP 1 Score: 736.5 bits (1900), Expect = 5.6e-209
Identity = 375/377 (99.47%), Postives = 376/377 (99.73%), Query Frame = 0


Query: 1   MAESICRALRDGALEGELAPALTIKDSMDSPFGFHAFAHLLAQLSINILAGKSQSRGLVL 60
           MAESICRALRDGALEGELAPALTIKDSMDSPFGFHAFAHLLAQLSINILAGKSQSRGLVL
Sbjct: 1   MAESICRALRDGALEGELAPALTIKDSMDSPFGFHAFAHLLAQLSINILAGKSQSRGLVL 60

Query: 61  LAFSRSPAYYVDLLKKRGVDVGSSDKWIQILDCYTDPLGWKERLMEGEKVSNVHQEVSSL 120
           LAFSRSPAYYVDLLKKRGVDVGSSDKWIQILDCYTDPLGWKERLMEGEKVSNVHQEVSSL
Sbjct: 61  LAFSRSPAYYVDLLKKRGVDVGSSDKWIQILDCYTDPLGWKERLMEGEKVSNVHQEVSSL 120

Query: 121 SNLCTNMRDMDKLFSSIVALGKAGFVGEGTVRFCVAIDSVTDMLRHSSTSAVAGLLSSLR 180
           SNLCTN+RDMDKLFSSIVALGKAGFVGEGTVRFCVAIDSVTDMLRHSSTSAVAGLLSSLR
Sbjct: 121 SNLCTNVRDMDKLFSSIVALGKAGFVGEGTVRFCVAIDSVTDMLRHSSTSAVAGLLSSLR 180

Query: 181 SNDKVSSTFWLVHEDLHEERVIAALEYMSSIVASVEPSTPSPYVHIGNLDNSYPEHNSTN 240
           SNDKVSSTFWLVHEDLHEERVIAALEYMSSIVASVEPSTPSPYVH GNLDNSYPEHNSTN
Sbjct: 181 SNDKVSSTFWLVHEDLHEERVIAALEYMSSIVASVEPSTPSPYVHRGNLDNSYPEHNSTN 240

Query: 241 GRFHVRFKRRNGRVRIICEDFKVEHSGIIKFTSILSEDAIINQGLIPKVHFNLQLSEKEL 300
           GRFHVRFKRRNGRVRIICEDFKVEHSGIIKFTSILSEDAIINQGLIPKVHFNLQLSEKEL
Sbjct: 241 GRFHVRFKRRNGRVRIICEDFKVEHSGIIKFTSILSEDAIINQGLIPKVHFNLQLSEKEL 300

Query: 301 MDRAKVVLPFEHQGNGKPIQIYDGRRSLTESKEDDKPLLTSEKGKDEGSGKGEIVYFRDS 360
           MDRAKVVLPFEHQGNGKPIQIYDGRRSLTESKEDDKPLLTSEKGKDEGSGKGEIVYFRDS
Sbjct: 301 MDRAKVVLPFEHQGNGKPIQIYDGRRSLTESKEDDKPLLTSEKGKDEGSGKGEIVYFRDS 360

Query: 361 DDERPDSDEDPDEDLDI 378
           DDERPDSDEDPDEDLDI
Sbjct: 361 DDERPDSDEDPDEDLDI 377

[Close]

BLAST of MS019178 vs. ExPASy TrEMBL
Match: A0A6J1CQU5 (Elongator complex protein 5 OS=Momordica charantia OX=3673 GN=LOC111013317 PE=3 SV=1)

HSP 1 Score: 730.3 bits (1884), Expect = 4.0e-207
Identity = 374/377 (99.20%), Postives = 375/377 (99.47%), Query Frame = 0


Query: 1   MAESICRALRDGALEGELAPALTIKDSMDSPFGFHAFAHLLAQLSINILAGKSQSRGLVL 60
           MAESICRALRDGALEGELAPALTIKDSMDSPFGFHAFAHLLAQLSINILAGKSQSRGLVL
Sbjct: 1   MAESICRALRDGALEGELAPALTIKDSMDSPFGFHAFAHLLAQLSINILAGKSQSRGLVL 60

Query: 61  LAFSRSPAYYVDLLKKRGVDVGSSDKWIQILDCYTDPLGWKERLMEGEKVSNVHQEVSSL 120
           LAFSRSPAYYVDLLKKRGVDVGSSDKWIQILDCYTDPLGWKERLMEGEKVSNVHQEVSSL
Sbjct: 61  LAFSRSPAYYVDLLKKRGVDVGSSDKWIQILDCYTDPLGWKERLMEGEKVSNVHQEVSSL 120

Query: 121 SNLCTNMRDMDKLFSSIVALGKAGFVGEGTVRFCVAIDSVTDMLRHSSTSAVAGLLSSLR 180
           SNLCTN+RDMDKLFSSIVALGK GFVGEGTVRFCVAIDSVTDMLRHSSTSAVAGLLSSLR
Sbjct: 121 SNLCTNVRDMDKLFSSIVALGK-GFVGEGTVRFCVAIDSVTDMLRHSSTSAVAGLLSSLR 180

Query: 181 SNDKVSSTFWLVHEDLHEERVIAALEYMSSIVASVEPSTPSPYVHIGNLDNSYPEHNSTN 240
           SNDKVSSTFWLVHEDLHEERVIAALEYMSSIVASVEPSTPSPYVH GNLDNSYPEHNSTN
Sbjct: 181 SNDKVSSTFWLVHEDLHEERVIAALEYMSSIVASVEPSTPSPYVHRGNLDNSYPEHNSTN 240

Query: 241 GRFHVRFKRRNGRVRIICEDFKVEHSGIIKFTSILSEDAIINQGLIPKVHFNLQLSEKEL 300
           GRFHVRFKRRNGRVRIICEDFKVEHSGIIKFTSILSEDAIINQGLIPKVHFNLQLSEKEL
Sbjct: 241 GRFHVRFKRRNGRVRIICEDFKVEHSGIIKFTSILSEDAIINQGLIPKVHFNLQLSEKEL 300

Query: 301 MDRAKVVLPFEHQGNGKPIQIYDGRRSLTESKEDDKPLLTSEKGKDEGSGKGEIVYFRDS 360
           MDRAKVVLPFEHQGNGKPIQIYDGRRSLTESKEDDKPLLTSEKGKDEGSGKGEIVYFRDS
Sbjct: 301 MDRAKVVLPFEHQGNGKPIQIYDGRRSLTESKEDDKPLLTSEKGKDEGSGKGEIVYFRDS 360

Query: 361 DDERPDSDEDPDEDLDI 378
           DDERPDSDEDPDEDLDI
Sbjct: 361 DDERPDSDEDPDEDLDI 376

[Close]

BLAST of MS019178 vs. ExPASy TrEMBL
Match: A0A6J1GA78 (Elongator complex protein 5 OS=Cucurbita moschata OX=3662 GN=LOC111452202 PE=3 SV=1)

HSP 1 Score: 632.1 bits (1629), Expect = 1.5e-177
Identity = 316/377 (83.82%), Postives = 350/377 (92.84%), Query Frame = 0


Query: 1   MAESICRALRDGALEGELAPALTIKDSMDSPFGFHAFAHLLAQLSINILAGKSQSRGLVL 60
           MA+SICRALRDGALEGELAPALT+KDS++SPFGFHAFAH+L QLS NILAGKSQSRGLVL
Sbjct: 1   MADSICRALRDGALEGELAPALTLKDSINSPFGFHAFAHVLMQLSSNILAGKSQSRGLVL 60

Query: 61  LAFSRSPAYYVDLLKKRGVDVGSSDKWIQILDCYTDPLGWKERLMEGEKVSNVHQEVSSL 120
           LAFSRSPAYY++LLKK GV+VGSS+KWIQILDCYTDPLGWKER   GEK+SNVHQEVS+L
Sbjct: 61  LAFSRSPAYYLELLKKSGVNVGSSEKWIQILDCYTDPLGWKERFTGGEKISNVHQEVSNL 120

Query: 121 SNLCTNMRDMDKLFSSIVALGKAGFVGEGTVRFCVAIDSVTDMLRHSSTSAVAGLLSSLR 180
           S+LCTN+RDMD LFSSI+ LGKAGFVGEGTVRFCVA+DSVTDMLRHSSTSAVAGLLS+LR
Sbjct: 121 SHLCTNVRDMDNLFSSIITLGKAGFVGEGTVRFCVAVDSVTDMLRHSSTSAVAGLLSNLR 180

Query: 181 SNDKVSSTFWLVHEDLHEERVIAALEYMSSIVASVEPSTPSPYVHIGNLDNSYPEHNSTN 240
           SNDKVSSTFWLVHEDLHEE+VIAALEYMSS+VA+VEP TPSPYV   +L+  Y EH+ST 
Sbjct: 181 SNDKVSSTFWLVHEDLHEEKVIAALEYMSSMVATVEPLTPSPYVRESSLNTPYLEHSSTK 240

Query: 241 GRFHVRFKRRNGRVRIICEDFKVEHSGIIKFTSILSEDAIINQGLIPKVHFNLQLSEKEL 300
           GRFHVR KRRNGRVR+ICE+FKVE SG IKFTSI SEDA++NQGL+PKV FNLQLSEKE 
Sbjct: 241 GRFHVRIKRRNGRVRVICENFKVEQSG-IKFTSISSEDAVVNQGLVPKVQFNLQLSEKEQ 300

Query: 301 MDRAKVVLPFEHQGNGKPIQIYDGRRSLTESKEDDKPLLTSEKGKDEGSGKGEIVYFRDS 360
           +DRA+VVLPFEHQGNGKPIQIYDGRRSLTESK+DDKPL T+EK KDE  GKGEI+YFRDS
Sbjct: 301 IDRARVVLPFEHQGNGKPIQIYDGRRSLTESKDDDKPLSTNEKSKDEEPGKGEIIYFRDS 360

Query: 361 DDERPDSDEDPDEDLDI 378
           +DE PDSDEDPD+DLDI
Sbjct: 361 EDEMPDSDEDPDDDLDI 376

[Close]

BLAST of MS019178 vs. ExPASy TrEMBL
Match: A0A6J1K998 (Elongator complex protein 5 OS=Cucurbita maxima OX=3661 GN=LOC111492840 PE=3 SV=1)

HSP 1 Score: 630.9 bits (1626), Expect = 3.3e-177
Identity = 316/377 (83.82%), Postives = 350/377 (92.84%), Query Frame = 0


Query: 1   MAESICRALRDGALEGELAPALTIKDSMDSPFGFHAFAHLLAQLSINILAGKSQSRGLVL 60
           MA+SICRALRDGALEGELAPALT+KDS++SPFGFHAFAH+L QLS NILAGKSQSRGLVL
Sbjct: 1   MADSICRALRDGALEGELAPALTLKDSINSPFGFHAFAHVLMQLSSNILAGKSQSRGLVL 60

Query: 61  LAFSRSPAYYVDLLKKRGVDVGSSDKWIQILDCYTDPLGWKERLMEGEKVSNVHQEVSSL 120
           LAFSRSPAYY++LLKK G +VGSS+KWIQILDCYTDPLGWKER   GEK+SNVHQEVS+L
Sbjct: 61  LAFSRSPAYYLELLKKSGGNVGSSEKWIQILDCYTDPLGWKERFTGGEKISNVHQEVSNL 120

Query: 121 SNLCTNMRDMDKLFSSIVALGKAGFVGEGTVRFCVAIDSVTDMLRHSSTSAVAGLLSSLR 180
           S+LCTN+RDMD LFSSI+ LGKAGFVGEGTVRFCVAIDSVTDMLRHSSTSAVAGLLS+ R
Sbjct: 121 SHLCTNVRDMDNLFSSIITLGKAGFVGEGTVRFCVAIDSVTDMLRHSSTSAVAGLLSNFR 180

Query: 181 SNDKVSSTFWLVHEDLHEERVIAALEYMSSIVASVEPSTPSPYVHIGNLDNSYPEHNSTN 240
           SNDKVSSTFWLVHEDLHEE+VIAALEYMSS+VA+VEP TPSPYV   +L+  Y EH+ST 
Sbjct: 181 SNDKVSSTFWLVHEDLHEEKVIAALEYMSSMVATVEPLTPSPYVCESSLNTPYLEHSSTK 240

Query: 241 GRFHVRFKRRNGRVRIICEDFKVEHSGIIKFTSILSEDAIINQGLIPKVHFNLQLSEKEL 300
           GRFHVR KRRNGRVR+ICE+FKVE SG IKFTSI SEDA++NQGL+PKV FNLQLSEKE 
Sbjct: 241 GRFHVRIKRRNGRVRVICENFKVEQSG-IKFTSISSEDAVVNQGLVPKVQFNLQLSEKEQ 300

Query: 301 MDRAKVVLPFEHQGNGKPIQIYDGRRSLTESKEDDKPLLTSEKGKDEGSGKGEIVYFRDS 360
           +DRA+VVLPFEHQGNGKPIQIYDGRRSLT+SK+DDKPL TSEK KDEG+GKGEI+YFRDS
Sbjct: 301 IDRARVVLPFEHQGNGKPIQIYDGRRSLTDSKDDDKPLSTSEKSKDEGAGKGEIIYFRDS 360

Query: 361 DDERPDSDEDPDEDLDI 378
           +DE PDSDEDPD+DLDI
Sbjct: 361 EDEMPDSDEDPDDDLDI 376

[Close]

BLAST of MS019178 vs. ExPASy TrEMBL
Match: A0A6J1G9J7 (Elongator complex protein 5 OS=Cucurbita moschata OX=3662 GN=LOC111452202 PE=3 SV=1)

HSP 1 Score: 625.9 bits (1613), Expect = 1.1e-175
Identity = 315/377 (83.55%), Postives = 349/377 (92.57%), Query Frame = 0


Query: 1   MAESICRALRDGALEGELAPALTIKDSMDSPFGFHAFAHLLAQLSINILAGKSQSRGLVL 60
           MA+SICRALRDGALEGELAPALT+KDS++SPFGFHAFAH+L QLS NILAGKSQSRGLVL
Sbjct: 1   MADSICRALRDGALEGELAPALTLKDSINSPFGFHAFAHVLMQLSSNILAGKSQSRGLVL 60

Query: 61  LAFSRSPAYYVDLLKKRGVDVGSSDKWIQILDCYTDPLGWKERLMEGEKVSNVHQEVSSL 120
           LAFSRSPAYY++LLKK GV+VGSS+KWIQILDCYTDPLGWKER   GEK+SNVHQEVS+L
Sbjct: 61  LAFSRSPAYYLELLKKSGVNVGSSEKWIQILDCYTDPLGWKERFTGGEKISNVHQEVSNL 120

Query: 121 SNLCTNMRDMDKLFSSIVALGKAGFVGEGTVRFCVAIDSVTDMLRHSSTSAVAGLLSSLR 180
           S+LCTN+RDMD LFSSI+ LGK GFVGEGTVRFCVA+DSVTDMLRHSSTSAVAGLLS+LR
Sbjct: 121 SHLCTNVRDMDNLFSSIITLGK-GFVGEGTVRFCVAVDSVTDMLRHSSTSAVAGLLSNLR 180

Query: 181 SNDKVSSTFWLVHEDLHEERVIAALEYMSSIVASVEPSTPSPYVHIGNLDNSYPEHNSTN 240
           SNDKVSSTFWLVHEDLHEE+VIAALEYMSS+VA+VEP TPSPYV   +L+  Y EH+ST 
Sbjct: 181 SNDKVSSTFWLVHEDLHEEKVIAALEYMSSMVATVEPLTPSPYVRESSLNTPYLEHSSTK 240

Query: 241 GRFHVRFKRRNGRVRIICEDFKVEHSGIIKFTSILSEDAIINQGLIPKVHFNLQLSEKEL 300
           GRFHVR KRRNGRVR+ICE+FKVE SG IKFTSI SEDA++NQGL+PKV FNLQLSEKE 
Sbjct: 241 GRFHVRIKRRNGRVRVICENFKVEQSG-IKFTSISSEDAVVNQGLVPKVQFNLQLSEKEQ 300

Query: 301 MDRAKVVLPFEHQGNGKPIQIYDGRRSLTESKEDDKPLLTSEKGKDEGSGKGEIVYFRDS 360
           +DRA+VVLPFEHQGNGKPIQIYDGRRSLTESK+DDKPL T+EK KDE  GKGEI+YFRDS
Sbjct: 301 IDRARVVLPFEHQGNGKPIQIYDGRRSLTESKDDDKPLSTNEKSKDEEPGKGEIIYFRDS 360

Query: 361 DDERPDSDEDPDEDLDI 378
           +DE PDSDEDPD+DLDI
Sbjct: 361 EDEMPDSDEDPDDDLDI 375

[Close]

BLAST of MS019178 vs. TAIR 10
Match: AT2G18410.1 (FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Histone acetylation protein 2 (InterPro:IPR019519); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). )

HSP 1 Score: 373.2 bits (957), Expect = 2.4e-103
Identity = 211/382 (55.24%), Postives = 270/382 (70.68%), Query Frame = 0


Query: 1   MAESICRALRDGALEGELAPALTIKDSMDSPFGFHAFAHLLAQLSINILAGKSQSRGLVL 60
           MAESI R LRDG  EGELAPALTI++++ SPFG     +LL  LS +ILAGKS S+GLVL
Sbjct: 1   MAESIFRKLRDGGEEGELAPALTIEETVASPFGLDVSGYLLTNLSSSILAGKSSSQGLVL 60

Query: 61  LAFSRSPAYYVDLLKKRGVDVGSSDKWIQILDCYTDPLGWKERLMEGEKVSNVHQEVSSL 120
           + FSRSP++Y+ LLK++G+ V SS KWI+ILDCYTDPLGW       ++ S    E SSL
Sbjct: 61  ITFSRSPSFYLQLLKQKGIVVSSSSKWIRILDCYTDPLGWI------DQSSTSFSEGSSL 120

Query: 121 SNLCTNMRDMDKLFSSIVALGKAGFVGEGTVRFCVAIDSVTDMLRHSSTSAVAGLLSSLR 180
             L   + D+ KLFSSI+  G+   VG G  RFCVAIDSV ++LRHS+   V+GLL+ LR
Sbjct: 121 IKLHKCVSDLKKLFSSIIEAGRE-LVGTGKTRFCVAIDSVNELLRHSAMPLVSGLLTDLR 180

Query: 181 SNDKVSSTFWLVHEDLHEERVIAALEYMSSIVASVEPSTPSPYVHIGNLDNSYPEHNS-T 240
           S+ ++SS FW ++ DLH+E+V  ALEY+S++ A++EP  PS       L+N +  H    
Sbjct: 181 SHAQISSVFWSLNTDLHQEKVTNALEYISTMKANLEPLCPSSDGQRNALENLFSVHQDFG 240

Query: 241 NGRFHVRFKRRNGRVRIICEDFKVEHSGIIKFTSILSEDAII--NQGLIPKVHFNLQLSE 300
            GRFHVRFK R GRVR++ E++ V+ SG I F+ I S D +I   + L+PKV FNLQLSE
Sbjct: 241 KGRFHVRFKLRKGRVRVMSEEYHVDQSG-INFSPISSVDTVIAATKSLLPKVQFNLQLSE 300

Query: 301 KELMDRAKVVLPFEHQGNGKPIQIYDGRRSLTESKEDDKPLLTSEKGKD-EGSGK-GEIV 360
           KE +++ KVVLPFEHQ +GK  +IYDGRRSL + K +  PL + E   D   SGK GEI+
Sbjct: 301 KERVEKEKVVLPFEHQDDGKSNEIYDGRRSLVDGKIETTPLSSMELQTDVVSSGKGGEII 360

Query: 361 YFRDSDDERPDSDEDPDEDLDI 378
           YFRDSDDE PDSDEDPD+DLDI
Sbjct: 361 YFRDSDDEHPDSDEDPDDDLDI 374

[Close]

BLAST of MS019178 vs. TAIR 10
Match: AT2G18410.2 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). )

HSP 1 Score: 272.7 bits (696), Expect = 4.4e-73
Identity = 151/294 (51.36%), Postives = 201/294 (68.37%), Query Frame = 0


Query: 1   MAESICRALRDGALEGELAPALTIKDSMDSPFGFHAFAHLLAQLSINILAGKSQSRGLVL 60
           MAESI R LRDG  EGELAPALTI++++ SPFG     +LL  LS +ILAGKS S+GLVL
Sbjct: 1   MAESIFRKLRDGGEEGELAPALTIEETVASPFGLDVSGYLLTNLSSSILAGKSSSQGLVL 60

Query: 61  LAFSRSPAYYVDLLKKRGVDVGSSDKWIQILDCYTDPLGWKERLMEGEKVSNVHQEVSSL 120
           + FSRSP++Y+ LLK++G+ V SS KWI+ILDCYTDPLGW       ++ S    E SSL
Sbjct: 61  ITFSRSPSFYLQLLKQKGIVVSSSSKWIRILDCYTDPLGWI------DQSSTSFSEGSSL 120

Query: 121 SNLCTNMRDMDKLFSSIVALGKAGFVGEGTVRFCVAIDSVTDMLRHSSTSAVAGLLSSLR 180
             L   + D+ KLFSSI+  G+   VG G  RFCVAIDSV ++LRHS+   V+GLL+ LR
Sbjct: 121 IKLHKCVSDLKKLFSSIIEAGRE-LVGTGKTRFCVAIDSVNELLRHSAMPLVSGLLTDLR 180

Query: 181 SNDKVSSTFWLVHEDLHEERVIAALEYMSSIVASVEPSTPSPYVHIGNLDNSYPEHNS-T 240
           S+ ++SS FW ++ DLH+E+V  ALEY+S++ A++EP  PS       L+N +  H    
Sbjct: 181 SHAQISSVFWSLNTDLHQEKVTNALEYISTMKANLEPLCPSSDGQRNALENLFSVHQDFG 240

Query: 241 NGRFHVRFKRRNGRVRIICEDFKVEHSGIIKFTSILSEDAII--NQGLIPKVHF 292
            GRFHVRFK R GRVR++ E++ V+ SG I F+ I S D +I   + L+PK  +
Sbjct: 241 KGRFHVRFKLRKGRVRVMSEEYHVDQSG-INFSPISSVDTVIAATKSLLPKASY 286

The following BLAST results are available for this feature:

BLAST of MS019178 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022143441.1	1.2e-208	99.47	elongator complex protein 5 isoform X1 [Momordica charantia]	[more]
XP_022143442.1	8.3e-207	99.20	elongator complex protein 5 isoform X2 [Momordica charantia]	[more]
XP_022948560.1	3.1e-177	83.82	elongator complex protein 5 isoform X1 [Cucurbita moschata]	[more]
KAG6607058.1	4.0e-177	84.62	Elongator complex protein 5, partial [Cucurbita argyrosperma subsp. sororia]	[more]
XP_022998086.1	6.8e-177	83.82	elongator complex protein 5 isoform X1 [Cucurbita maxima]	[more]

BLAST of MS019178 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
F4IQJ2	3.4e-102	55.24	Elongator complex protein 5 OS=Arabidopsis thaliana OX=3702 GN=ELP5 PE=1 SV=1	[more]

BLAST of MS019178 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1CQ94	5.6e-209	99.47	Elongator complex protein 5 OS=Momordica charantia OX=3673 GN=LOC111013317 PE=3 ...	[more]
A0A6J1CQU5	4.0e-207	99.20	Elongator complex protein 5 OS=Momordica charantia OX=3673 GN=LOC111013317 PE=3 ...	[more]
A0A6J1GA78	1.5e-177	83.82	Elongator complex protein 5 OS=Cucurbita moschata OX=3662 GN=LOC111452202 PE=3 S...	[more]
A0A6J1K998	3.3e-177	83.82	Elongator complex protein 5 OS=Cucurbita maxima OX=3661 GN=LOC111492840 PE=3 SV=...	[more]
A0A6J1G9J7	1.1e-175	83.55	Elongator complex protein 5 OS=Cucurbita moschata OX=3662 GN=LOC111452202 PE=3 S...	[more]

BLAST of MS019178 vs. TAIR 10


Match Name	E-value	Identity	Description
AT2G18410.1	2.4e-103	55.24	FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknow...	[more]
AT2G18410.2	4.4e-73	51.36	unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic...	[more]

InterPro

Analysis Name: InterPro Annotations of Bitter gourd (TR) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR019519	Elongator complex protein 5	PFAM	PF10483	Elong_Iki1	coord: 148..311 e-value: 1.5E-8 score: 34.6
IPR019519	Elongator complex protein 5	PANTHER	PTHR15641	ELONGATOR COMPLEX PROTEIN 5	coord: 1..377
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 326..362
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 318..377
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 363..377

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
MS019178.1	MS019178.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0002098	tRNA wobble uridine modification
cellular_component	GO:0033588	elongator holoenzyme complex