
MS019173 (gene) Bitter gourd (TR) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.AACTTGAAGAGAAACACATCAAATAAGTCTAAAAAGACGATTACAAGTGGGAAGTGTAATAGATTTTTGATCTCCATCAACGTCCTTGGAAGCACAGGGCCAATTAGATTTGTAGTAAATGAAGAAGATTTGGTTTGCGAGGTGATGAAGACCACTCTTGTAGCATATGCTCGCCAAGCTCGTCTTCCCGCTCTCGGAACTAATGTCGATAATTTTATTCTCTACTGCATCAACGATGGAGTTGAAGGTAGATTCTCATGCAATCCTTCCCTTTTAACTTAAATTATATTGTTAGGGTCTGTTTGATAACATTCTCGTTTCTTGTTTTTCATTTCTAATTTTGTCAAGAAATATATGCATTTTGTCACTAACTATGACCCTATTTGGTAATGCTATATTTCCTTGTTTCTCGTTTCCAATTTTATTAAGAAACGCCTAAGATTTTTGTAACTAATTATGTTTCTTGTTTCTCATTCTCAAAATTATATAGAAATTTTGGAAACAATTAAAACAGGTTTCTCGTTTCTTATTTTCATTTCCAATTGATTACAAAATATAAATATAAAACTATTGGATCATCCTTGAATTTATGGGTATTACGGTCATTCAATTCTATTTTTCTTTATTAAAAATGAGGAAACATAAATGGGATCGGAAACGGAAACATTATCAAACGGATCCTATGGGCTCGTTTAATAACGTTCATGTTTCTTGTTTGTGTTTCTTTATTTTTAATGAAGAAAAATGTGTTGCATGATTTCAATCTCCAAGAATTCAAGTATGATAAAACAATATTTTTATTTATATTTTGGAACAAATTGGAAATGGGAACAACAAAAGAGAAACTTGTTTTGATTGTTCCCAAAATTTCTATATTATGAGAATGTTCCAAAAAAAGGAGGAACAACAAACAAAAGTTAGTTCTAAAATACTTAGATTTCTTAACAGAATTGGAAACGGAAACATTACCAAACGGACCCTATATTTCTTGTTTCTCCTCCTCTTGGAACATTTTCAAAATTGTATAGAGATCTTAGAAACAACCAAAAACAAGATTTTTCTTTCTTGTTCTCATTTCTAATTTATTCCAAAACATCAATAAAACAATTGAATTCACAGATATTGGGGTCATGCGCGTAATTCATTTTCATTTATTAAAATTAAAGAAACAGAAACATTACCAAAAAGTCTTTAATTTTCCGATCTCTTTTTGCAGTGAGGTTTGAACTTTTATTTTAACTTACTACAGCTCTAAGTCCAAGGGAAACTATAGGAAGATCAAAGCAAGTAAGGCACTTTCTGCTATGCAAAAAGCAAGGGACTTCACATGCATTTCCTAATGATCAGAAAACATTGTCAAATCAAATGGAAGAAGAAAAGAGGAGAAACAGTCCTTGTAAGACATGGCTCAACAAGTCCCTCATGAGTTACACCATACAATTTTATTGCATGTTA AACTTGAAGAGAAACACATCAAATAAGTCTAAAAAGACGATTACAAGTGGGAAGTGTAATAGATTTTTGATCTCCATCAACGTCCTTGGAAGCACAGGGCCAATTAGATTTGTAGTAAATGAAGAAGATTTGGTTTGCGAGGTGATGAAGACCACTCTTGTAGCATATGCTCGCCAAGCTCGTCTTCCCGCTCTCGGAACTAATGTCGATAATTTTATTCTCTACTGCATCAACGATGGAGTTGAAGCTCTAAGTCCAAGGGAAACTATAGGAAGATCAAAGCAAGTAAGGCACTTTCTGCTATGCAAAAAGCAAGGGACTTCACATGCATTTCCTAATGATCAGAAAACATTGTCAAATCAAATGGAAGAAGAAAAGAGGAGAAACAGTCCTTGTAAGACATGGCTCAACAAGTCCCTCATGAGTTACACCATACAATTTTATTGCATGTTA AACTTGAAGAGAAACACATCAAATAAGTCTAAAAAGACGATTACAAGTGGGAAGTGTAATAGATTTTTGATCTCCATCAACGTCCTTGGAAGCACAGGGCCAATTAGATTTGTAGTAAATGAAGAAGATTTGGTTTGCGAGGTGATGAAGACCACTCTTGTAGCATATGCTCGCCAAGCTCGTCTTCCCGCTCTCGGAACTAATGTCGATAATTTTATTCTCTACTGCATCAACGATGGAGTTGAAGCTCTAAGTCCAAGGGAAACTATAGGAAGATCAAAGCAAGTAAGGCACTTTCTGCTATGCAAAAAGCAAGGGACTTCACATGCATTTCCTAATGATCAGAAAACATTGTCAAATCAAATGGAAGAAGAAAAGAGGAGAAACAGTCCTTGTAAGACATGGCTCAACAAGTCCCTCATGAGTTACACCATACAATTTTATTGCATGTTA NLKRNTSNKSKKTITSGKCNRFLISINVLGSTGPIRFVVNEEDLVCEVMKTTLVAYARQARLPALGTNVDNFILYCINDGVEALSPRETIGRSKQVRHFLLCKKQGTSHAFPNDQKTLSNQMEEEKRRNSPCKTWLNKSLMSYTIQFYCML Homology
BLAST of MS019173 vs. NCBI nr
Match: XP_022143314.1 (uncharacterized protein LOC111013214 [Momordica charantia]) HSP 1 Score: 256.5 bits (654), Expect = 1.4e-64 Identity = 127/130 (97.69%), Postives = 130/130 (100.00%), Query Frame = 0
BLAST of MS019173 vs. NCBI nr
Match: XP_038907220.1 (uncharacterized protein LOC120092999 [Benincasa hispida]) HSP 1 Score: 206.5 bits (524), Expect = 1.7e-49 Identity = 112/151 (74.17%), Postives = 128/151 (84.77%), Query Frame = 0
BLAST of MS019173 vs. NCBI nr
Match: XP_011651392.1 (uncharacterized protein LOC105434881 [Cucumis sativus] >KGN57775.1 hypothetical protein Csa_010444 [Cucumis sativus]) HSP 1 Score: 193.4 bits (490), Expect = 1.5e-45 Identity = 104/151 (68.87%), Postives = 124/151 (82.12%), Query Frame = 0
BLAST of MS019173 vs. NCBI nr
Match: XP_008457016.1 (PREDICTED: uncharacterized protein LOC103496795 [Cucumis melo]) HSP 1 Score: 188.3 bits (477), Expect = 4.7e-44 Identity = 103/151 (68.21%), Postives = 121/151 (80.13%), Query Frame = 0
BLAST of MS019173 vs. NCBI nr
Match: XP_022948336.1 (uncharacterized protein LOC111452042 [Cucurbita moschata]) HSP 1 Score: 168.7 bits (426), Expect = 3.9e-38 Identity = 88/141 (62.41%), Postives = 108/141 (76.60%), Query Frame = 0
BLAST of MS019173 vs. ExPASy TrEMBL
Match: A0A6J1CNZ1 (uncharacterized protein LOC111013214 OS=Momordica charantia OX=3673 GN=LOC111013214 PE=4 SV=1) HSP 1 Score: 256.5 bits (654), Expect = 6.8e-65 Identity = 127/130 (97.69%), Postives = 130/130 (100.00%), Query Frame = 0
BLAST of MS019173 vs. ExPASy TrEMBL
Match: A0A0A0L707 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G292550 PE=4 SV=1) HSP 1 Score: 193.4 bits (490), Expect = 7.1e-46 Identity = 104/151 (68.87%), Postives = 124/151 (82.12%), Query Frame = 0
BLAST of MS019173 vs. ExPASy TrEMBL
Match: A0A1S3C4I6 (uncharacterized protein LOC103496795 OS=Cucumis melo OX=3656 GN=LOC103496795 PE=4 SV=1) HSP 1 Score: 188.3 bits (477), Expect = 2.3e-44 Identity = 103/151 (68.21%), Postives = 121/151 (80.13%), Query Frame = 0
BLAST of MS019173 vs. ExPASy TrEMBL
Match: A0A6J1G8Y8 (uncharacterized protein LOC111452042 OS=Cucurbita moschata OX=3662 GN=LOC111452042 PE=4 SV=1) HSP 1 Score: 168.7 bits (426), Expect = 1.9e-38 Identity = 88/141 (62.41%), Postives = 108/141 (76.60%), Query Frame = 0
BLAST of MS019173 vs. ExPASy TrEMBL
Match: A0A6J1K9B8 (uncharacterized protein LOC111492858 OS=Cucurbita maxima OX=3661 GN=LOC111492858 PE=4 SV=1) HSP 1 Score: 162.2 bits (409), Expect = 1.7e-36 Identity = 82/134 (61.19%), Postives = 103/134 (76.87%), Query Frame = 0
BLAST of MS019173 vs. TAIR 10
Match: AT5G37730.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G23150.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). ) HSP 1 Score: 104.8 bits (260), Expect = 6.4e-23 Identity = 52/98 (53.06%), Postives = 67/98 (68.37%), Query Frame = 0
BLAST of MS019173 vs. TAIR 10
Match: AT1G23150.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G70780.1); Has 124 Blast hits to 124 proteins in 17 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 124; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). ) HSP 1 Score: 102.1 bits (253), Expect = 4.1e-22 Identity = 67/144 (46.53%), Postives = 83/144 (57.64%), Query Frame = 0
BLAST of MS019173 vs. TAIR 10
Match: AT1G70780.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: mitochondrion; EXPRESSED IN: sperm cell, male gametophyte, pollen tube; EXPRESSED DURING: L mature pollen stage, M germinated pollen stage; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G23150.1); Has 143 Blast hits to 143 proteins in 17 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 143; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). ) HSP 1 Score: 99.8 bits (247), Expect = 2.0e-21 Identity = 59/132 (44.70%), Postives = 77/132 (58.33%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Bitter gourd (TR) v1
Date Performed: 2021-10-25 Position : 0 Zoom : x 1
Relationships
The following mRNA feature(s) are a part of this gene:
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