MS019110 (gene) Bitter gourd (TR) v1

Overview


Name	MS019110
Type	gene
Organism	Momordica charantia cv. TR (Bitter gourd (TR) v1)
Description	RING/FYVE/PHD zinc finger superfamily protein
Location	scaffold20: 1552192 .. 1555755 (-)
RNA-Seq Expression	MS019110
Synteny	MS019110

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGGGGATCATTTTGTGCTGTTAGTGGATCGGTTGCTCACTGAATCAAACGTTGAAGCTACTATTGAGAGCAAAAACAGAATCCATCAGCCCATGGCCTCAACAAATGTAGATAATGTGATATCTTCCTTAAATATAGATGTCGATTCCATGTTGCCTTCAAGCAAATCTGTTGAGTGCAGAATTTGCCACGATGAGGATGTCGAATCAAACATGGAGACACCATGTTCTTGCTGTGGCAGCTTGAAGGTTAGATTTAGTTTTGTTTACGACTCAACACCAACTGGTTTCACTGATAAAATCAAGATAGCTATTCTTGAATCTCTCTCTCTTCCAAATTTTACGCCTGTTTACATGATGATCTTCGACATTTTCTGCATTTAGTTTTGGTATCCAACTTTATCTTTTCCCCAAAATCTTTGCTCTTGGATTCTTTAATACGATAAAGCACTTGCAACTTAAAGGATAGAATCAGACTCATGTCACAGATTTAGGATCTTGTATCCTATTTCTTGTAATTTAATACAGGAGAGCTATACTATATCCTTATTCTTTGTTTGCATGTACTTAGGGTTCTATAATATGATAAAAACGCTTGCAACTTAGTTTGCATGTACTTATTATTAGATTGAAAGGATGGAACCAGACTCATGTCACAGATTTAGGACCTTGTATCGTATTTCTTGTAGTTTAATACAGGAGAACTATACCTAGTTTCTTTTCCTCTTTCTATCCTTATTCTTTGTTGCGTTTGTTTAGATGGTTCACCCTGATAATTAGCTTCCAATTAGTGTTGATAATTGCAGTATGCTCATCGCAAGTGCGTACAGAGGTGGTGCAACGAGAAAGGCAATACAATGTGTGAGATTTGCCACCAGGTCTGTTGTTTTTATAAAGAATGTTTCTAATACATGGCTAATTTATGACAAAATGACAAACTATGTGTTAAACATACCTGATACCTCCTTTAGTTTAGCGGTGATTTAGAGCGAATTTAGGAATTGGATCACTTTTGCAAGGGTAAAAAGTCTTTTTTTTTCCATGAGAAACTAAGTTTCGTTGGGGAAATGAAATAATATGCAAGGACATACAAACATATCAGCCCAACAAAAAGAGGCACCTAGAGAAAGGGACTCCAATCCAAAAGAACAATATCTAACTAATAATTACAAAAAAAACCTTAGAAATGACTTCCCGAGGGAGGTATTAAATCTAATAAGCTCCCATACATACTCCCTGGATCTCGCAATCTCCTAAAGATTCTATGAACAACAAAATTCCTCCATCAGCACCTGACAATCCTTGTTACGAGCCCAAGACACCCCAAACAACTCAAAGAATCAATCTCAAATATCTTGAGTAAACTGACATCTCCACAAAACGTAGTCAAGATCCTCCGAGGCACCTTTGCAAAGCACATTACGACCCCTAAAAGAAAGAATATCTCCGAGATTGACTTTTCCATGTAAGACTTGCCAAGCAATTTTTTATTTTTTATCTTTTTTTTGGAATCTTAACCTTCCTAAGCTAAGCAAACAACAGGGCAAAAAGGGGAAAGAGAGGGAGAACTCAACAAGTGAAAAAAAGAGCTATAGGAAAATCACTTGGACGGGCTAGGGGTCCAAACCTGAGAATGATTTCTCCCCCGACAAAAAGGAACGTCCCTTAGCAGAAGAAGCAAGGTAGAAACCTCCAAAATCTACCTGTCCATCAAGGGTTGTCTAAGACTCAAAGAAATAGAAGGCAACTTCACCTCAACGCTAAAACAAAGGCTGCTGAATCAACCTCATATTAGAAATGTGGTACAGATGAGAGAATAAAAGGCAGAGGGGTCTATTTACCTTATAGTAAAAAGTGTTTTTAACAAAATCACTTAATCACAACTAGGGTTAATTGAGAGGGAATGGGTTCAAACCCCATGATGGCCACCTACCTTCGGAATTAGTAATTCTTATGTGTTTTCCGGCACCAAATGTAGTAGGTTCAAGCGGTTGCCCCATGAGATTAGTCGATGTGTGCATAAGCTGGCCCGAACACTCACGAATATAAAAAAAAACAAAAAAAAAAAAACAAAATCACTTGATCGCTTTTCAAAGTTTTTAGCGTTTGATATGATAATCATAAGTTGATTTTGAAAATTCTAAAAATACTAAAGAACACTTAAATGCTTTTAGGAGAAATGCTAAATTAGTTCTTTCAAAAGTGTTCATAGAAGAGGTATTTTTATTTAAAAGTATTATTTTCTAAAGACATCTGAAACTTACCATTTACATGGTATCAGAGCAAAAAGTCTTGAGTGTGAACCTTTGCAATGTCATTTTCTCTCCGATTAATACTAACAGAAATTTGTTTGGTCTCATGCTAATTTCTGAACTCGTGCCACAATTGTTAAATATAACTTGTTCAGTGGTTGTTTAACACTATGTAAGTAAGAAGAGTTTTTTTCCTTATACTGCAGCAATTTAAGCCCGGGTTTACAGCACCTCCCCCTGTATTTTATTATGGAGGTATTGGTTCGCCAATACATTTCAGGTAAGCCATTTACCTCTCCCCCTATAATTCATTTTATTTAATTTCAGCTGCCAGTTTCTCTAGTTTATCTTGTATGTTCAATTCTTGTTCATTCTTTTTTTTTTAAACACTATTGATATTGGTATAACAATGCTGTCAAATTGTGGTTTTAGGGGAAATTGGGAGATGTCTAGACTGAACCTGCATGTATCTGCAGGAATGCCTGATCACGATTATGTTGATTCTGACATTGATGATTTCCTCGCTCCCTCTCCGAGAAGCGTGTTGTGCTGCCGCATAGTTGCAGTTATTGTATTCCCTCTCTCCTAAAACCATTTAGGTGTACTTTAGTGGTTTTAGAATTAAAAAATAAAAGATTGAAAAAATATTACATGTTTTCACTTGTTGATTCCTTTTCATCCACAATGTGAAGTTACCAAAAACGAATATAAATTTTGGTTTAAAACATATTATCATTCTTAGTTATTCTATTTTAAGCATAAACTTTCAAATATTTTGTTTTAATTCTTAAATTTTCTCCGTTAATTCTTTAGTAATTTATTGAACATAAACCTTAAGTAGACATATCTTATATTCCTTTACCCTAGTGTGTCTACATGAACAAATGTTAGAAGTCATATGTAACGGGAAGAACGAAAATAGTTTTATTCCAAGTTAGGAGATACAATAGCATATGTTTGGAACTGCTGACATATTTGTATGTTGCAGTTTATCGTTCTCCTCCTCTTACGCCATACGCTACCAATTATAATCAGCGGAACTGGAGAGTATTCATTGACATTGTTAATGGTAAGCTCGTTGCCCTGTTTCCTTTTCTACTTGTCCTCCCCCTGGCCTCCTCCATTGTTGAGACCAATGGAGAATCAGAACTTCATTTGCTGTATGTTTCAGTTGCTCATCTTGAGAATTGTTGGGATTCTTCTGCCTATATATGTCATGGTTAGGGCGTTTACTTCCATCCAACGGCGTCGCCATTATCAGGTTAGTGACACTGCTATATCCCGATTCATTTCGAACAACATTTCGTCAAAT

mRNA sequence

ATGGGGGATCATTTTGTGCTGTTAGTGGATCGGTTGCTCACTGAATCAAACGTTGAAGCTACTATTGAGAGCAAAAACAGAATCCATCAGCCCATGGCCTCAACAAATGTAGATAATGTGATATCTTCCTTAAATATAGATGTCGATTCCATGTTGCCTTCAAGCAAATCTGTTGAGTGCAGAATTTGCCACGATGAGGATGTCGAATCAAACATGGAGACACCATGTTCTTGCTGTGGCAGCTTGAAGTATGCTCATCGCAAGTGCGTACAGAGGTGGTGCAACGAGAAAGGCAATACAATGTGTGAGATTTGCCACCAGCAATTTAAGCCCGGGTTTACAGCACCTCCCCCTGTATTTTATTATGGAGGTATTGGTTCGCCAATACATTTCAGGGGAAATTGGGAGATGTCTAGACTGAACCTGCATGTATCTGCAGGAATGCCTGATCACGATTATGTTGATTCTGACATTGATGATTTCCTCGCTCCCTCTCCGAGAAGCGTGTTGTGCTGCCGCATAGTTGCAGTTATTTTTATCGTTCTCCTCCTCTTACGCCATACGCTACCAATTATAATCAGCGGAACTGGAGAGTATTCATTGACATTGTTAATGTTGCTCATCTTGAGAATTGTTGGGATTCTTCTGCCTATATATGTCATGGTTAGGGCGTTTACTTCCATCCAACGGCGTCGCCATTATCAGGTTAGTGACACTGCTATATCCCGATTCATTTCGAACAACATTTCGTCAAAT

Coding sequence (CDS)

ATGGGGGATCATTTTGTGCTGTTAGTGGATCGGTTGCTCACTGAATCAAACGTTGAAGCTACTATTGAGAGCAAAAACAGAATCCATCAGCCCATGGCCTCAACAAATGTAGATAATGTGATATCTTCCTTAAATATAGATGTCGATTCCATGTTGCCTTCAAGCAAATCTGTTGAGTGCAGAATTTGCCACGATGAGGATGTCGAATCAAACATGGAGACACCATGTTCTTGCTGTGGCAGCTTGAAGTATGCTCATCGCAAGTGCGTACAGAGGTGGTGCAACGAGAAAGGCAATACAATGTGTGAGATTTGCCACCAGCAATTTAAGCCCGGGTTTACAGCACCTCCCCCTGTATTTTATTATGGAGGTATTGGTTCGCCAATACATTTCAGGGGAAATTGGGAGATGTCTAGACTGAACCTGCATGTATCTGCAGGAATGCCTGATCACGATTATGTTGATTCTGACATTGATGATTTCCTCGCTCCCTCTCCGAGAAGCGTGTTGTGCTGCCGCATAGTTGCAGTTATTTTTATCGTTCTCCTCCTCTTACGCCATACGCTACCAATTATAATCAGCGGAACTGGAGAGTATTCATTGACATTGTTAATGTTGCTCATCTTGAGAATTGTTGGGATTCTTCTGCCTATATATGTCATGGTTAGGGCGTTTACTTCCATCCAACGGCGTCGCCATTATCAGGTTAGTGACACTGCTATATCCCGATTCATTTCGAACAACATTTCGTCAAAT

Protein sequence

MGDHFVLLVDRLLTESNVEATIESKNRIHQPMASTNVDNVISSLNIDVDSMLPSSKSVECRICHDEDVESNMETPCSCCGSLKYAHRKCVQRWCNEKGNTMCEICHQQFKPGFTAPPPVFYYGGIGSPIHFRGNWEMSRLNLHVSAGMPDHDYVDSDIDDFLAPSPRSVLCCRIVAVIFIVLLLLRHTLPIIISGTGEYSLTLLMLLILRIVGILLPIYVMVRAFTSIQRRRHYQVSDTAISRFISNNISSN

Homology

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BLAST of MS019110 vs. NCBI nr
Match: XP_022143288.1 (uncharacterized protein LOC111013195 isoform X3 [Momordica charantia] >XP_022143289.1 uncharacterized protein LOC111013195 isoform X3 [Momordica charantia] >XP_022143290.1 uncharacterized protein LOC111013195 isoform X3 [Momordica charantia])

HSP 1 Score: 473.8 bits (1218), Expect = 9.3e-130
Identity = 234/235 (99.57%), Postives = 234/235 (99.57%), Query Frame = 0


Query: 1   MGDHFVLLVDRLLTESNVEATIESKNRIHQPMASTNVDNVISSLNIDVDSMLPSSKSVEC 60
           MGDHFVLLVDRLLTESNVEATIESKNRIHQPMASTNVDNVISSLNIDVDSMLPSSKSVEC
Sbjct: 1   MGDHFVLLVDRLLTESNVEATIESKNRIHQPMASTNVDNVISSLNIDVDSMLPSSKSVEC 60

Query: 61  RICHDEDVESNMETPCSCCGSLKYAHRKCVQRWCNEKGNTMCEICHQQFKPGFTAPPPVF 120
           RICHDEDVESNMETPCSCCGSLKYAHRKCVQRWCNEKGNTMCEICHQQFKPGFTAPPPVF
Sbjct: 61  RICHDEDVESNMETPCSCCGSLKYAHRKCVQRWCNEKGNTMCEICHQQFKPGFTAPPPVF 120

Query: 121 YYGGIGSPIHFRGNWEMSRLNLHVSAGMPDHDYVDSDIDDFLAPSPRSVLCCRIVAVIFI 180
           YYGGIGSPIHFRGNWEMSRLNLHVSAGMPDHDYVDSDIDDFLAPSPRSVLCCRIVAVIFI
Sbjct: 121 YYGGIGSPIHFRGNWEMSRLNLHVSAGMPDHDYVDSDIDDFLAPSPRSVLCCRIVAVIFI 180

Query: 181 VLLLLRHTLPIIISGTGEYSLTLLMLLILRIVGILLPIYVMVRAFTSIQRRRHYQ 236
           VLLLLRHTLPIIISGTGEYSLTLLMLLILRIVGILLPIYVMVRAFTS QRRRHYQ
Sbjct: 181 VLLLLRHTLPIIISGTGEYSLTLLMLLILRIVGILLPIYVMVRAFTSSQRRRHYQ 235

[Close]

BLAST of MS019110 vs. NCBI nr
Match: XP_022143286.1 (uncharacterized protein LOC111013195 isoform X1 [Momordica charantia])

HSP 1 Score: 473.8 bits (1218), Expect = 9.3e-130
Identity = 234/235 (99.57%), Postives = 234/235 (99.57%), Query Frame = 0


Query: 1   MGDHFVLLVDRLLTESNVEATIESKNRIHQPMASTNVDNVISSLNIDVDSMLPSSKSVEC 60
           MGDHFVLLVDRLLTESNVEATIESKNRIHQPMASTNVDNVISSLNIDVDSMLPSSKSVEC
Sbjct: 9   MGDHFVLLVDRLLTESNVEATIESKNRIHQPMASTNVDNVISSLNIDVDSMLPSSKSVEC 68

Query: 61  RICHDEDVESNMETPCSCCGSLKYAHRKCVQRWCNEKGNTMCEICHQQFKPGFTAPPPVF 120
           RICHDEDVESNMETPCSCCGSLKYAHRKCVQRWCNEKGNTMCEICHQQFKPGFTAPPPVF
Sbjct: 69  RICHDEDVESNMETPCSCCGSLKYAHRKCVQRWCNEKGNTMCEICHQQFKPGFTAPPPVF 128

Query: 121 YYGGIGSPIHFRGNWEMSRLNLHVSAGMPDHDYVDSDIDDFLAPSPRSVLCCRIVAVIFI 180
           YYGGIGSPIHFRGNWEMSRLNLHVSAGMPDHDYVDSDIDDFLAPSPRSVLCCRIVAVIFI
Sbjct: 129 YYGGIGSPIHFRGNWEMSRLNLHVSAGMPDHDYVDSDIDDFLAPSPRSVLCCRIVAVIFI 188

Query: 181 VLLLLRHTLPIIISGTGEYSLTLLMLLILRIVGILLPIYVMVRAFTSIQRRRHYQ 236
           VLLLLRHTLPIIISGTGEYSLTLLMLLILRIVGILLPIYVMVRAFTS QRRRHYQ
Sbjct: 189 VLLLLRHTLPIIISGTGEYSLTLLMLLILRIVGILLPIYVMVRAFTSSQRRRHYQ 243

[Close]

BLAST of MS019110 vs. NCBI nr
Match: XP_022143287.1 (uncharacterized protein LOC111013195 isoform X2 [Momordica charantia])

HSP 1 Score: 466.5 bits (1199), Expect = 1.5e-127
Identity = 232/235 (98.72%), Postives = 232/235 (98.72%), Query Frame = 0


Query: 1   MGDHFVLLVDRLLTESNVEATIESKNRIHQPMASTNVDNVISSLNIDVDSMLPSSKSVEC 60
           MGDHFVLLVDRLLTESNVEATIESKNRIHQPMASTNVDNVISSLNIDVDSMLPSSKSVEC
Sbjct: 9   MGDHFVLLVDRLLTESNVEATIESKNRIHQPMASTNVDNVISSLNIDVDSMLPSSKSVEC 68

Query: 61  RICHDEDVESNMETPCSCCGSLKYAHRKCVQRWCNEKGNTMCEICHQQFKPGFTAPPPVF 120
           RICHDEDVESNMETPCSCCGSLKYAHRKCVQRWCNEKGNTMCEICHQQFKPGFTAPPPVF
Sbjct: 69  RICHDEDVESNMETPCSCCGSLKYAHRKCVQRWCNEKGNTMCEICHQQFKPGFTAPPPVF 128

Query: 121 YYGGIGSPIHFRGNWEMSRLNLHVSAGMPDHDYVDSDIDDFLAPSPRSVLCCRIVAVIFI 180
           YYGGIGSPIHFRGNWEMSRLNLHVSAGMPDHDYVDSDIDDFLAPSPRSVLCCRIVA  FI
Sbjct: 129 YYGGIGSPIHFRGNWEMSRLNLHVSAGMPDHDYVDSDIDDFLAPSPRSVLCCRIVA--FI 188

Query: 181 VLLLLRHTLPIIISGTGEYSLTLLMLLILRIVGILLPIYVMVRAFTSIQRRRHYQ 236
           VLLLLRHTLPIIISGTGEYSLTLLMLLILRIVGILLPIYVMVRAFTS QRRRHYQ
Sbjct: 189 VLLLLRHTLPIIISGTGEYSLTLLMLLILRIVGILLPIYVMVRAFTSSQRRRHYQ 241

[Close]

BLAST of MS019110 vs. NCBI nr
Match: XP_023528859.1 (uncharacterized protein LOC111791660 isoform X1 [Cucurbita pepo subsp. pepo] >XP_023528860.1 uncharacterized protein LOC111791660 isoform X1 [Cucurbita pepo subsp. pepo] >XP_023528861.1 uncharacterized protein LOC111791660 isoform X1 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 398.7 bits (1023), Expect = 3.8e-107
Identity = 197/252 (78.17%), Postives = 219/252 (86.90%), Query Frame = 0


Query: 1   MGDHFVLLVDRLLTESNVEATIESKNRIHQPMASTNVDNVISSLNIDVDSMLPSSKSVEC 60
           MG+HFVLLVD+LLTESN+EATIE KNR  +PMAST+ DN+ISSLNIDV+ M PSSK V+C
Sbjct: 1   MGEHFVLLVDQLLTESNLEATIERKNRNCRPMASTSADNMISSLNIDVEFMSPSSKLVQC 60

Query: 61  RICHDEDVESNMETPCSCCGSLKYAHRKCVQRWCNEKGNTMCEICHQQFKPGFTAPPPVF 120
           RICHDED ES METPCSCCGSLKYAHRKCVQRWCNEKGNT+CEICHQ F+PG+TAP PV 
Sbjct: 61  RICHDEDDESKMETPCSCCGSLKYAHRKCVQRWCNEKGNTICEICHQDFEPGYTAPLPVL 120

Query: 121 YYGGIGSPIHFRGNWEMSRLNLHVSAGMPDHDYVDSDIDDFLAPSPRSVLCCRIVAVIFI 180
           YYG I SP+HFR +WEMSRLNLHV AGMPDH+Y DSD D+F  PSPRS+LCCR+VAV FI
Sbjct: 121 YYGDITSPVHFRESWEMSRLNLHVPAGMPDHEYPDSDFDEFFTPSPRSILCCRMVAVTFI 180

Query: 181 VLLLLRHTLPIIISGTGEYSLTLLMLLILRIVGILLPIYVMVRAFTSIQRRRHYQVSDTA 240
           VLL+LRHTLPI+ISG GEYSLTLLMLLILRIVGILLPIYVMVRAFTSIQRRRHYQ     
Sbjct: 181 VLLVLRHTLPIVISGAGEYSLTLLMLLILRIVGILLPIYVMVRAFTSIQRRRHYQDPRLR 240

Query: 241 ISRFISNNISSN 253
           ++     N S+N
Sbjct: 241 LATPEDENDSTN 252

[Close]

BLAST of MS019110 vs. NCBI nr
Match: XP_038901862.1 (uncharacterized protein LOC120088347 isoform X3 [Benincasa hispida])

HSP 1 Score: 396.7 bits (1018), Expect = 1.5e-106
Identity = 193/235 (82.13%), Postives = 213/235 (90.64%), Query Frame = 0


Query: 1   MGDHFVLLVDRLLTESNVEATIESKNRIHQPMASTNVDNVISSLNIDVDSMLPSSKSVEC 60
           MGDHFVLLVD+LLTESN+EATI+ K+RI  PMASTN DN+ISSLNIDV+S+ PSS  V+C
Sbjct: 1   MGDHFVLLVDQLLTESNLEATIQRKSRICHPMASTNADNMISSLNIDVESVSPSS-IVQC 60

Query: 61  RICHDEDVESNMETPCSCCGSLKYAHRKCVQRWCNEKGNTMCEICHQQFKPGFTAPPPVF 120
           RICHDED +SNMETPCSCCGSLKYAHRKCVQRW NEKGNT+CEICHQ FKPG+TAPPPVF
Sbjct: 61  RICHDEDDDSNMETPCSCCGSLKYAHRKCVQRWSNEKGNTICEICHQDFKPGYTAPPPVF 120

Query: 121 YYGGIGSPIHFRGNWEMSRLNLHVSAGMPDHDYVDSDIDDFLAPSPRSVLCCRIVAVIFI 180
           Y G I SPIHFRGNWEMSRLNLHV AG PD +Y+DSD D+F APSPRS+LCCR+VAVIFI
Sbjct: 121 YCGDISSPIHFRGNWEMSRLNLHVPAGTPDQEYLDSDFDEFFAPSPRSILCCRVVAVIFI 180

Query: 181 VLLLLRHTLPIIISGTGEYSLTLLMLLILRIVGILLPIYVMVRAFTSIQRRRHYQ 236
            LL+LRHTLPI+ISG G YS TLLML+ILRIVGILLPIYVMV+AFTSIQRRRHYQ
Sbjct: 181 ALLVLRHTLPIVISGAGGYSFTLLMLMILRIVGILLPIYVMVKAFTSIQRRRHYQ 234

[Close]

BLAST of MS019110 vs. ExPASy Swiss-Prot
Match: Q5T0T0 (E3 ubiquitin-protein ligase MARCHF8 OS=Homo sapiens OX=9606 GN=MARCHF8 PE=1 SV=1)

HSP 1 Score: 62.4 bits (150), Expect = 8.5e-09
Identity = 28/61 (45.90%), Postives = 38/61 (62.30%), Query Frame = 0


Query: 50  SMLPSSKSVECRICHDE-DVESNMETPCSCCGSLKYAHRKCVQRWCNEKGNTMCEICHQQ 109
           S+ PSS+ + CRICH E D ES + TPC C GSL + H+ C+Q+W        CE+C  +
Sbjct: 71  SITPSSQDI-CRICHCEGDDESPLITPCHCTGSLHFVHQACLQQWIKSSDTRCCELCKYE 130

[Close]

BLAST of MS019110 vs. ExPASy Swiss-Prot
Match: Q0VD59 (E3 ubiquitin-protein ligase MARCHF8 OS=Bos taurus OX=9913 GN=MARCHF8 PE=2 SV=1)

HSP 1 Score: 61.2 bits (147), Expect = 1.9e-08
Identity = 27/61 (44.26%), Postives = 38/61 (62.30%), Query Frame = 0


Query: 50  SMLPSSKSVECRICHDE-DVESNMETPCSCCGSLKYAHRKCVQRWCNEKGNTMCEICHQQ 109
           S+ PS++ + CRICH E D ES + TPC C GSL + H+ C+Q+W        CE+C  +
Sbjct: 69  SVTPSNQDI-CRICHCEGDDESPLITPCRCTGSLHFVHQTCLQQWIKSSDTRCCELCKYE 128

[Close]

BLAST of MS019110 vs. ExPASy Swiss-Prot
Match: Q9DBD2 (E3 ubiquitin-protein ligase MARCHF8 OS=Mus musculus OX=10090 GN=Marchf8 PE=2 SV=1)

HSP 1 Score: 61.2 bits (147), Expect = 1.9e-08
Identity = 27/61 (44.26%), Postives = 38/61 (62.30%), Query Frame = 0


Query: 50  SMLPSSKSVECRICHDE-DVESNMETPCSCCGSLKYAHRKCVQRWCNEKGNTMCEICHQQ 109
           S+ PS++ + CRICH E D ES + TPC C GSL + H+ C+Q+W        CE+C  +
Sbjct: 67  SVTPSNQDI-CRICHCEGDDESPLITPCHCTGSLHFVHQACLQQWIKSSDTRCCELCKYE 126

[Close]

BLAST of MS019110 vs. ExPASy Swiss-Prot
Match: Q5XH39 (E3 ubiquitin-protein ligase MARCHF8 OS=Xenopus laevis OX=8355 GN=marchf8 PE=2 SV=2)

HSP 1 Score: 60.5 bits (145), Expect = 3.2e-08
Identity = 32/88 (36.36%), Postives = 46/88 (52.27%), Query Frame = 0


Query: 29  HQPMASTNVDNVISSLNIDV------DSMLPSSKSVECRICHDE-DVESNMETPCSCCGS 88
           H    S+N+    S  ++         S+ PSS+ + CRICH E D ES + TPC C GS
Sbjct: 17  HSVSRSSNISKAGSPTSVSAPSRFPRTSVTPSSQDI-CRICHCEGDDESPLITPCHCTGS 76

Query: 89  LKYAHRKCVQRWCNEKGNTMCEICHQQF 110
           L + H+ C+Q+W        CE+C  +F
Sbjct: 77  LHFVHQACLQQWIKSSDTRCCELCKFEF 103

[Close]

BLAST of MS019110 vs. ExPASy Swiss-Prot
Match: Q28IK8 (E3 ubiquitin-protein ligase MARCHF8 OS=Xenopus tropicalis OX=8364 GN=marchf8 PE=2 SV=1)

HSP 1 Score: 60.5 bits (145), Expect = 3.2e-08
Identity = 32/88 (36.36%), Postives = 46/88 (52.27%), Query Frame = 0


Query: 29  HQPMASTNVDNVISSLNIDV------DSMLPSSKSVECRICHDE-DVESNMETPCSCCGS 88
           H    S+N+    S  ++         S+ PSS+ + CRICH E D ES + TPC C GS
Sbjct: 17  HSVSRSSNISKAGSPTSVSAPSSFPRTSVTPSSQDI-CRICHCEGDDESPLITPCHCTGS 76

Query: 89  LKYAHRKCVQRWCNEKGNTMCEICHQQF 110
           L + H+ C+Q+W        CE+C  +F
Sbjct: 77  LHFVHQACLQQWIKSSDTRCCELCKFEF 103

[Close]

BLAST of MS019110 vs. ExPASy TrEMBL
Match: A0A6J1CNE6 (uncharacterized protein LOC111013195 isoform X3 OS=Momordica charantia OX=3673 GN=LOC111013195 PE=4 SV=1)

HSP 1 Score: 473.8 bits (1218), Expect = 4.5e-130
Identity = 234/235 (99.57%), Postives = 234/235 (99.57%), Query Frame = 0


Query: 1   MGDHFVLLVDRLLTESNVEATIESKNRIHQPMASTNVDNVISSLNIDVDSMLPSSKSVEC 60
           MGDHFVLLVDRLLTESNVEATIESKNRIHQPMASTNVDNVISSLNIDVDSMLPSSKSVEC
Sbjct: 1   MGDHFVLLVDRLLTESNVEATIESKNRIHQPMASTNVDNVISSLNIDVDSMLPSSKSVEC 60

Query: 61  RICHDEDVESNMETPCSCCGSLKYAHRKCVQRWCNEKGNTMCEICHQQFKPGFTAPPPVF 120
           RICHDEDVESNMETPCSCCGSLKYAHRKCVQRWCNEKGNTMCEICHQQFKPGFTAPPPVF
Sbjct: 61  RICHDEDVESNMETPCSCCGSLKYAHRKCVQRWCNEKGNTMCEICHQQFKPGFTAPPPVF 120

Query: 121 YYGGIGSPIHFRGNWEMSRLNLHVSAGMPDHDYVDSDIDDFLAPSPRSVLCCRIVAVIFI 180
           YYGGIGSPIHFRGNWEMSRLNLHVSAGMPDHDYVDSDIDDFLAPSPRSVLCCRIVAVIFI
Sbjct: 121 YYGGIGSPIHFRGNWEMSRLNLHVSAGMPDHDYVDSDIDDFLAPSPRSVLCCRIVAVIFI 180

Query: 181 VLLLLRHTLPIIISGTGEYSLTLLMLLILRIVGILLPIYVMVRAFTSIQRRRHYQ 236
           VLLLLRHTLPIIISGTGEYSLTLLMLLILRIVGILLPIYVMVRAFTS QRRRHYQ
Sbjct: 181 VLLLLRHTLPIIISGTGEYSLTLLMLLILRIVGILLPIYVMVRAFTSSQRRRHYQ 235

[Close]

BLAST of MS019110 vs. ExPASy TrEMBL
Match: A0A6J1CPU3 (uncharacterized protein LOC111013195 isoform X1 OS=Momordica charantia OX=3673 GN=LOC111013195 PE=4 SV=1)

HSP 1 Score: 473.8 bits (1218), Expect = 4.5e-130
Identity = 234/235 (99.57%), Postives = 234/235 (99.57%), Query Frame = 0


Query: 1   MGDHFVLLVDRLLTESNVEATIESKNRIHQPMASTNVDNVISSLNIDVDSMLPSSKSVEC 60
           MGDHFVLLVDRLLTESNVEATIESKNRIHQPMASTNVDNVISSLNIDVDSMLPSSKSVEC
Sbjct: 9   MGDHFVLLVDRLLTESNVEATIESKNRIHQPMASTNVDNVISSLNIDVDSMLPSSKSVEC 68

Query: 61  RICHDEDVESNMETPCSCCGSLKYAHRKCVQRWCNEKGNTMCEICHQQFKPGFTAPPPVF 120
           RICHDEDVESNMETPCSCCGSLKYAHRKCVQRWCNEKGNTMCEICHQQFKPGFTAPPPVF
Sbjct: 69  RICHDEDVESNMETPCSCCGSLKYAHRKCVQRWCNEKGNTMCEICHQQFKPGFTAPPPVF 128

Query: 121 YYGGIGSPIHFRGNWEMSRLNLHVSAGMPDHDYVDSDIDDFLAPSPRSVLCCRIVAVIFI 180
           YYGGIGSPIHFRGNWEMSRLNLHVSAGMPDHDYVDSDIDDFLAPSPRSVLCCRIVAVIFI
Sbjct: 129 YYGGIGSPIHFRGNWEMSRLNLHVSAGMPDHDYVDSDIDDFLAPSPRSVLCCRIVAVIFI 188

Query: 181 VLLLLRHTLPIIISGTGEYSLTLLMLLILRIVGILLPIYVMVRAFTSIQRRRHYQ 236
           VLLLLRHTLPIIISGTGEYSLTLLMLLILRIVGILLPIYVMVRAFTS QRRRHYQ
Sbjct: 189 VLLLLRHTLPIIISGTGEYSLTLLMLLILRIVGILLPIYVMVRAFTSSQRRRHYQ 243

[Close]

BLAST of MS019110 vs. ExPASy TrEMBL
Match: A0A6J1CQD4 (uncharacterized protein LOC111013195 isoform X2 OS=Momordica charantia OX=3673 GN=LOC111013195 PE=4 SV=1)

HSP 1 Score: 466.5 bits (1199), Expect = 7.2e-128
Identity = 232/235 (98.72%), Postives = 232/235 (98.72%), Query Frame = 0


Query: 1   MGDHFVLLVDRLLTESNVEATIESKNRIHQPMASTNVDNVISSLNIDVDSMLPSSKSVEC 60
           MGDHFVLLVDRLLTESNVEATIESKNRIHQPMASTNVDNVISSLNIDVDSMLPSSKSVEC
Sbjct: 9   MGDHFVLLVDRLLTESNVEATIESKNRIHQPMASTNVDNVISSLNIDVDSMLPSSKSVEC 68

Query: 61  RICHDEDVESNMETPCSCCGSLKYAHRKCVQRWCNEKGNTMCEICHQQFKPGFTAPPPVF 120
           RICHDEDVESNMETPCSCCGSLKYAHRKCVQRWCNEKGNTMCEICHQQFKPGFTAPPPVF
Sbjct: 69  RICHDEDVESNMETPCSCCGSLKYAHRKCVQRWCNEKGNTMCEICHQQFKPGFTAPPPVF 128

Query: 121 YYGGIGSPIHFRGNWEMSRLNLHVSAGMPDHDYVDSDIDDFLAPSPRSVLCCRIVAVIFI 180
           YYGGIGSPIHFRGNWEMSRLNLHVSAGMPDHDYVDSDIDDFLAPSPRSVLCCRIVA  FI
Sbjct: 129 YYGGIGSPIHFRGNWEMSRLNLHVSAGMPDHDYVDSDIDDFLAPSPRSVLCCRIVA--FI 188

Query: 181 VLLLLRHTLPIIISGTGEYSLTLLMLLILRIVGILLPIYVMVRAFTSIQRRRHYQ 236
           VLLLLRHTLPIIISGTGEYSLTLLMLLILRIVGILLPIYVMVRAFTS QRRRHYQ
Sbjct: 189 VLLLLRHTLPIIISGTGEYSLTLLMLLILRIVGILLPIYVMVRAFTSSQRRRHYQ 241

[Close]

BLAST of MS019110 vs. ExPASy TrEMBL
Match: A0A6J1FB67 (uncharacterized protein LOC111442434 isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111442434 PE=4 SV=1)

HSP 1 Score: 393.7 bits (1010), Expect = 6.0e-106
Identity = 191/235 (81.28%), Postives = 211/235 (89.79%), Query Frame = 0


Query: 1   MGDHFVLLVDRLLTESNVEATIESKNRIHQPMASTNVDNVISSLNIDVDSMLPSSKSVEC 60
           MG+HFVLLVD+LLTESN+E+TIE KNR  +PMAST+ DN+ISSLNIDV+ M PSSK V+C
Sbjct: 1   MGEHFVLLVDQLLTESNLESTIERKNRNCRPMASTSADNMISSLNIDVEFMSPSSKLVQC 60

Query: 61  RICHDEDVESNMETPCSCCGSLKYAHRKCVQRWCNEKGNTMCEICHQQFKPGFTAPPPVF 120
           RICHDED ES METPCSCCGSLKYAHR CVQRWCNEKGNT+CEICHQ F+PG+TAP PV 
Sbjct: 61  RICHDEDDESKMETPCSCCGSLKYAHRMCVQRWCNEKGNTICEICHQDFEPGYTAPLPVL 120

Query: 121 YYGGIGSPIHFRGNWEMSRLNLHVSAGMPDHDYVDSDIDDFLAPSPRSVLCCRIVAVIFI 180
           YYG I SP+HFR +WEMSRLNLHV AGMPDH+Y DSD D+F  PSPRS+LCCR+VAV FI
Sbjct: 121 YYGDITSPVHFRESWEMSRLNLHVPAGMPDHEYPDSDFDEFFTPSPRSILCCRMVAVTFI 180

Query: 181 VLLLLRHTLPIIISGTGEYSLTLLMLLILRIVGILLPIYVMVRAFTSIQRRRHYQ 236
           VLL+LRHTLPI+ISG GEYSLTLLMLLILRIVGILLPIYVMVRAFTSIQ RRHYQ
Sbjct: 181 VLLVLRHTLPIVISGAGEYSLTLLMLLILRIVGILLPIYVMVRAFTSIQGRRHYQ 235

[Close]

BLAST of MS019110 vs. ExPASy TrEMBL
Match: A0A6J1J9L9 (uncharacterized protein LOC111482515 isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC111482515 PE=4 SV=1)

HSP 1 Score: 393.3 bits (1009), Expect = 7.8e-106
Identity = 195/252 (77.38%), Postives = 217/252 (86.11%), Query Frame = 0


Query: 1   MGDHFVLLVDRLLTESNVEATIESKNRIHQPMASTNVDNVISSLNIDVDSMLPSSKSVEC 60
           MG+HFVLLVD+LLTESN+EATIE KNR  +PMAST+ DN+ISSLNIDV+ M  SSK V+C
Sbjct: 1   MGEHFVLLVDQLLTESNLEATIERKNRNCRPMASTSADNMISSLNIDVEFMPSSSKLVQC 60

Query: 61  RICHDEDVESNMETPCSCCGSLKYAHRKCVQRWCNEKGNTMCEICHQQFKPGFTAPPPVF 120
           RICHDED ES ME PCSCCGSLKYAHRKCVQRWCNEKGNT+CEICHQ F+PG+TAP PV 
Sbjct: 61  RICHDEDDESKMEAPCSCCGSLKYAHRKCVQRWCNEKGNTICEICHQDFEPGYTAPLPVL 120

Query: 121 YYGGIGSPIHFRGNWEMSRLNLHVSAGMPDHDYVDSDIDDFLAPSPRSVLCCRIVAVIFI 180
           YYG I SP+HFR +WEMSRLNLHV AGMPDH+Y DSD D+F  PSPRS+LCCR+VAV FI
Sbjct: 121 YYGDITSPVHFRESWEMSRLNLHVPAGMPDHEYPDSDFDEFFTPSPRSILCCRMVAVTFI 180

Query: 181 VLLLLRHTLPIIISGTGEYSLTLLMLLILRIVGILLPIYVMVRAFTSIQRRRHYQVSDTA 240
           VLL+LRHTLPI+ISG GEYSLTLLMLLILRIVGILLPIYVMVRAFTSIQRRRHYQ     
Sbjct: 181 VLLVLRHTLPIVISGAGEYSLTLLMLLILRIVGILLPIYVMVRAFTSIQRRRHYQDPRLR 240

Query: 241 ISRFISNNISSN 253
           ++     N S+N
Sbjct: 241 LATPEDENDSTN 252

[Close]

BLAST of MS019110 vs. TAIR 10
Match: AT2G01275.1 (RING/FYVE/PHD zinc finger superfamily protein )

HSP 1 Score: 231.5 bits (589), Expect = 7.5e-61
Identity = 121/245 (49.39%), Postives = 167/245 (68.16%), Query Frame = 0


Query: 1   MGDHFVLLVDRLLTESNVEATIESKNRIHQPMASTNVDNVISSLNIDVDSMLPSS--KSV 60
           MGDHFVLLVDRL+TES +EA I+S+N++ Q         ++    ++   ML +      
Sbjct: 1   MGDHFVLLVDRLITESTIEAAIQSRNQMLQANIPVEECTILDDKTLE---MLRNGDLSMA 60

Query: 61  ECRICHDEDVESNMETPCSCCGSLKYAHRKCVQRWCNEKGNTMCEICHQQFKPGFTAPPP 120
           ECRICHDED++SNMETPCSC GS+KYAHR+CVQRWCNEKG+T CEICHQ+FKP +TAPPP
Sbjct: 61  ECRICHDEDLDSNMETPCSCSGSVKYAHRRCVQRWCNEKGDTTCEICHQEFKPDYTAPPP 120

Query: 121 VFYYGGIGSPIHFRGNWEMS-RLNLHVSAGMPDHDYVDSDIDDFLAPSPRSVLCCRIVAV 180
           +   G +  P+HFRGNW +S R +  ++    D  ++D     +   S  S +CCR + +
Sbjct: 121 LLELGHV--PLHFRGNWGISQREHRFITVVPADSTFID---QPYPLSSTTSFICCRSLVL 180

Query: 181 IFIVLLLLRHTLPIIISGTGEYSLTLLMLLILRIVGILLPIYVMVRAFTSIQRRRHYQVS 240
           IF+ LL+LRHTLP++++G+  +   L  LL LRI+GI+LPIYV+ +A  +   RRH +  
Sbjct: 181 IFMALLILRHTLPLVLTGSNLHVFPLFTLLFLRILGIMLPIYVVTKAVATC--RRHSRTL 235

Query: 241 DTAIS 243
           DT+ S
Sbjct: 241 DTSPS 235

[Close]

BLAST of MS019110 vs. TAIR 10
Match: AT2G01275.2 (RING/FYVE/PHD zinc finger superfamily protein )

HSP 1 Score: 231.5 bits (589), Expect = 7.5e-61
Identity = 121/245 (49.39%), Postives = 167/245 (68.16%), Query Frame = 0


Query: 1   MGDHFVLLVDRLLTESNVEATIESKNRIHQPMASTNVDNVISSLNIDVDSMLPSS--KSV 60
           MGDHFVLLVDRL+TES +EA I+S+N++ Q         ++    ++   ML +      
Sbjct: 1   MGDHFVLLVDRLITESTIEAAIQSRNQMLQANIPVEECTILDDKTLE---MLRNGDLSMA 60

Query: 61  ECRICHDEDVESNMETPCSCCGSLKYAHRKCVQRWCNEKGNTMCEICHQQFKPGFTAPPP 120
           ECRICHDED++SNMETPCSC GS+KYAHR+CVQRWCNEKG+T CEICHQ+FKP +TAPPP
Sbjct: 61  ECRICHDEDLDSNMETPCSCSGSVKYAHRRCVQRWCNEKGDTTCEICHQEFKPDYTAPPP 120

Query: 121 VFYYGGIGSPIHFRGNWEMS-RLNLHVSAGMPDHDYVDSDIDDFLAPSPRSVLCCRIVAV 180
           +   G +  P+HFRGNW +S R +  ++    D  ++D     +   S  S +CCR + +
Sbjct: 121 LLELGHV--PLHFRGNWGISQREHRFITVVPADSTFID---QPYPLSSTTSFICCRSLVL 180

Query: 181 IFIVLLLLRHTLPIIISGTGEYSLTLLMLLILRIVGILLPIYVMVRAFTSIQRRRHYQVS 240
           IF+ LL+LRHTLP++++G+  +   L  LL LRI+GI+LPIYV+ +A  +   RRH +  
Sbjct: 181 IFMALLILRHTLPLVLTGSNLHVFPLFTLLFLRILGIMLPIYVVTKAVATC--RRHSRTL 235

Query: 241 DTAIS 243
           DT+ S
Sbjct: 241 DTSPS 235

[Close]

BLAST of MS019110 vs. TAIR 10
Match: AT5G38070.1 (RING/FYVE/PHD zinc finger superfamily protein )

HSP 1 Score: 216.5 bits (550), Expect = 2.5e-56
Identity = 118/247 (47.77%), Postives = 166/247 (67.21%), Query Frame = 0


Query: 1   MGDHFVLLVDRLLTESNVEATIESKNRIHQPMASTNVDNVISSLNIDVDSMLPSSKSVEC 60
           MGDH VL+VDRL ++S     + + NR      S N D V  S++   D  L  SK V+C
Sbjct: 1   MGDHLVLVVDRLSSDSG----LGTVNRADPKADSVNEDGVSESISAGAD--LCESKFVQC 60

Query: 61  RICHDEDVESNMETPCSCCGSLKYAHRKCVQRWCNEKGNTMCEICHQQFKPGFTAPPPVF 120
           RICHDED ++NM+TPCSC G+LK+AH  CVQRWCNEKG+T+CEIC QQ+KPG+TAP  +F
Sbjct: 61  RICHDEDEDTNMDTPCSCSGTLKFAHHNCVQRWCNEKGDTVCEICRQQYKPGYTAPRQLF 120

Query: 121 YYGGIGSPIHFRGNWEMSRLNLHVSAGMPDHDYVDSDIDDFLAPSPRSVLCCRIVAVIFI 180
           +Y GI   ++F  +W +  L+L     +   D  D D D +   SP S++CCR++A++F+
Sbjct: 121 HYTGIS--MNFGSDWGIEGLDLRNPYFLTWGD-ADDDHDLYSFHSPTSLICCRLIALLFV 180

Query: 181 VLLLLRHTLPIIISGTGEYSLTLLMLLILRIVGILLPIYVMVRAFTSIQRRRHYQVSDTA 240
           +LL LRH+LP+++ G  ++S+TLLML ++R +GILL  YV  ++F  IQR R  Q  DT 
Sbjct: 181 LLLFLRHSLPVLLGGVDDFSITLLMLPLVRTLGILLIAYVFFKSFIVIQRCR--QERDTR 236

Query: 241 ISRFISN 248
           +S F S+
Sbjct: 241 LSGFSSD 236

[Close]

BLAST of MS019110 vs. TAIR 10
Match: AT2G02960.2 (RING/FYVE/PHD zinc finger superfamily protein )

HSP 1 Score: 160.6 bits (405), Expect = 1.6e-39
Identity = 89/202 (44.06%), Postives = 120/202 (59.41%), Query Frame = 0


Query: 49  DSMLPSSKSVECRICHDEDVESNMETPCSCCGSLKYAHRKCVQRWCNEKGNTMCEICHQQ 108
           D   P   S ECRIC DE    N+E+PC+C GSLKYAHRKCVQRWCNEKGN +CEICHQ 
Sbjct: 32  DENEPLIVSGECRICSDESPVENLESPCACSGSLKYAHRKCVQRWCNEKGNIICEICHQP 91

Query: 109 FKPGFTAPPPVFYYGGIGSPIHFRGNWEMSRLNLH----VSAGMPDHDYVDSDIDDFLAP 168
           ++PG+TAPPP        + I   G W +S L++H    ++    +  Y++S+  ++ A 
Sbjct: 92  YQPGYTAPPPPLQ--PEETTIDIGGGWTISGLDVHDPRLLAIAEAERRYLESEYVEYTAS 151

Query: 169 SPRSVLCCRIVAVIFIVLLLLRHTLPIIISGTGEYS--LTLLMLLILRIVGILLPIYVMV 228
           S      CR  A+I + LLLLRH L I     GE     ++L L++LR  G LLP Y+M 
Sbjct: 152 SASGAAFCRSAALILMALLLLRHALTITDDTDGEEDDPSSILSLVLLRAAGFLLPCYIMA 211

Query: 229 RAFTSIQRRRHYQVSDTAISRF 245
            A + +QRRR  Q +    ++F
Sbjct: 212 WAISILQRRRQRQEAAALATQF 231

[Close]

BLAST of MS019110 vs. TAIR 10
Match: AT2G02960.4 (RING/FYVE/PHD zinc finger superfamily protein )

HSP 1 Score: 160.6 bits (405), Expect = 1.6e-39
Identity = 89/202 (44.06%), Postives = 120/202 (59.41%), Query Frame = 0


Query: 49  DSMLPSSKSVECRICHDEDVESNMETPCSCCGSLKYAHRKCVQRWCNEKGNTMCEICHQQ 108
           D   P   S ECRIC DE    N+E+PC+C GSLKYAHRKCVQRWCNEKGN +CEICHQ 
Sbjct: 32  DENEPLIVSGECRICSDESPVENLESPCACSGSLKYAHRKCVQRWCNEKGNIICEICHQP 91

Query: 109 FKPGFTAPPPVFYYGGIGSPIHFRGNWEMSRLNLH----VSAGMPDHDYVDSDIDDFLAP 168
           ++PG+TAPPP        + I   G W +S L++H    ++    +  Y++S+  ++ A 
Sbjct: 92  YQPGYTAPPPPLQ--PEETTIDIGGGWTISGLDVHDPRLLAIAEAERRYLESEYVEYTAS 151

Query: 169 SPRSVLCCRIVAVIFIVLLLLRHTLPIIISGTGEYS--LTLLMLLILRIVGILLPIYVMV 228
           S      CR  A+I + LLLLRH L I     GE     ++L L++LR  G LLP Y+M 
Sbjct: 152 SASGAAFCRSAALILMALLLLRHALTITDDTDGEEDDPSSILSLVLLRAAGFLLPCYIMA 211

Query: 229 RAFTSIQRRRHYQVSDTAISRF 245
            A + +QRRR  Q +    ++F
Sbjct: 212 WAISILQRRRQRQEAAALATQF 231

The following BLAST results are available for this feature:

BLAST of MS019110 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022143288.1	9.3e-130	99.57	uncharacterized protein LOC111013195 isoform X3 [Momordica charantia] >XP_022143...	[more]
XP_022143286.1	9.3e-130	99.57	uncharacterized protein LOC111013195 isoform X1 [Momordica charantia]	[more]
XP_022143287.1	1.5e-127	98.72	uncharacterized protein LOC111013195 isoform X2 [Momordica charantia]	[more]
XP_023528859.1	3.8e-107	78.17	uncharacterized protein LOC111791660 isoform X1 [Cucurbita pepo subsp. pepo] >XP...	[more]
XP_038901862.1	1.5e-106	82.13	uncharacterized protein LOC120088347 isoform X3 [Benincasa hispida]	[more]

BLAST of MS019110 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q5T0T0	8.5e-09	45.90	E3 ubiquitin-protein ligase MARCHF8 OS=Homo sapiens OX=9606 GN=MARCHF8 PE=1 SV=1	[more]
Q0VD59	1.9e-08	44.26	E3 ubiquitin-protein ligase MARCHF8 OS=Bos taurus OX=9913 GN=MARCHF8 PE=2 SV=1	[more]
Q9DBD2	1.9e-08	44.26	E3 ubiquitin-protein ligase MARCHF8 OS=Mus musculus OX=10090 GN=Marchf8 PE=2 SV=...	[more]
Q5XH39	3.2e-08	36.36	E3 ubiquitin-protein ligase MARCHF8 OS=Xenopus laevis OX=8355 GN=marchf8 PE=2 SV...	[more]
Q28IK8	3.2e-08	36.36	E3 ubiquitin-protein ligase MARCHF8 OS=Xenopus tropicalis OX=8364 GN=marchf8 PE=...	[more]

BLAST of MS019110 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1CNE6	4.5e-130	99.57	uncharacterized protein LOC111013195 isoform X3 OS=Momordica charantia OX=3673 G...	[more]
A0A6J1CPU3	4.5e-130	99.57	uncharacterized protein LOC111013195 isoform X1 OS=Momordica charantia OX=3673 G...	[more]
A0A6J1CQD4	7.2e-128	98.72	uncharacterized protein LOC111013195 isoform X2 OS=Momordica charantia OX=3673 G...	[more]
A0A6J1FB67	6.0e-106	81.28	uncharacterized protein LOC111442434 isoform X1 OS=Cucurbita moschata OX=3662 GN...	[more]
A0A6J1J9L9	7.8e-106	77.38	uncharacterized protein LOC111482515 isoform X1 OS=Cucurbita maxima OX=3661 GN=L...	[more]

BLAST of MS019110 vs. TAIR 10


Match Name	E-value	Identity	Description
AT2G01275.1	7.5e-61	49.39	RING/FYVE/PHD zinc finger superfamily protein	[more]
AT2G01275.2	7.5e-61	49.39	RING/FYVE/PHD zinc finger superfamily protein	[more]
AT5G38070.1	2.5e-56	47.77	RING/FYVE/PHD zinc finger superfamily protein	[more]
AT2G02960.2	1.6e-39	44.06	RING/FYVE/PHD zinc finger superfamily protein	[more]
AT2G02960.4	1.6e-39	44.06	RING/FYVE/PHD zinc finger superfamily protein	[more]

InterPro

Analysis Name: InterPro Annotations of Bitter gourd (TR) v1
Date Performed: 2021-10-25

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR011016	Zinc finger, RING-CH-type	SMART	SM00744	ringv_2	coord: 59..106 e-value: 3.9E-20 score: 82.9
IPR011016	Zinc finger, RING-CH-type	PFAM	PF12906	RINGv	coord: 60..105 e-value: 1.3E-11 score: 44.4
IPR011016	Zinc finger, RING-CH-type	PROSITE	PS51292	ZF_RING_CH	coord: 52..112 score: 22.01753
IPR022143	Protein of unknown function DUF3675	PFAM	PF12428	DUF3675	coord: 111..224 e-value: 3.5E-35 score: 121.1
IPR013083	Zinc finger, RING/FYVE/PHD-type	GENE3D	3.30.40.10	Zinc/RING finger domain, C3HC4 (zinc finger)	coord: 48..115 e-value: 1.3E-19 score: 71.5
IPR033275	E3 ubiquitin-protein ligase MARCH-like	PANTHER	PTHR23012	RING/FYVE/PHD ZINC FINGER DOMAIN-CONTAINING	coord: 1..239
None	No IPR available	PANTHER	PTHR23012:SF174	E3 UBIQUITIN-PROTEIN LIGASE MARCH-RELATED	coord: 1..239
None	No IPR available	CDD	cd16495	RING_CH-C4HC3_MARCH	coord: 60..106 e-value: 3.74657E-18 score: 73.9008
None	No IPR available	SUPERFAMILY	57850	RING/U-box	coord: 55..110

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
MS019110.1	MS019110.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
molecular_function	GO:0008270	zinc ion binding