MS019104 (gene) Bitter gourd (TR) v1

Overview


Name	MS019104
Type	gene
Organism	Momordica charantia cv. TR (Bitter gourd (TR) v1)
Description	Nicastrin
Location	scaffold20: 1493541 .. 1494225 (+)
RNA-Seq Expression	MS019104
Synteny	MS019104

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

CAGGCTTCTTCAAAAAATGTGAAGAATAGGAAAGCTTACACATCTAATGTTGCTGAATTTGATCTGGTGATTCAGGTACTTGCTTCAGGTGTTACATTTATGTGATTTCACATCTTATATGGTTATTTTAATAACACTTTGCATGGTTTATGTAACCGATTTTCATTTTTGTCTAGACAACTAAGGCTGGGACTCATAGTTCAGTGTCTTGTTTGAAAGAAGAAACATGCCTTCCATTAGGTGGATACAGGTTAAGTGTTGCTTGGTACCTTTTTCTGCACATAGTTTTAGAATTTCATTGTGTTTATTTTATTAAAAGAGATCGGTATCTTTTCAGTGTCTGGACGTTGCTTCCTCCAATCAATATTTCTTCCTCAGATCAGTCTAAGCCCACCATTCTAACGGTAGCATCAATGGATTCTGCTTCTTTCTTCCTTGATAAAAGCATTGGTGCAGACTCCCCCATTTCTGTATGATTTATTTTGAGCAAGTATATCAGTTATAAACCTTACCATGTTTATTCTGCTACCTCTTAGATCATTTTTGATATGTTTAGGATCTGATTTCATTGCTGGTTGCAGTTGATGCAGTTTCCCATGTGGATGGACTGGATGATCTTCATAAACAGGTTCTTATGAAGGCTTTCTACTCTGTATCCAATTGTATCTTTATACTTAAGTGCATG

mRNA sequence

CAGGCTTCTTCAAAAAATGTGAAGAATAGGAAAGCTTACACATCTAATGTTGCTGAATTTGATCTGGTGATTCAGACAACTAAGGCTGGGACTCATAGTTCAGTGTCTTGTTTGAAAGAAGAAACATGCCTTCCATTAGGTGGATACAGTGTCTGGACGTTGCTTCCTCCAATCAATATTTCTTCCTCAGATCAGTCTAAGCCCACCATTCTAACGGTAGCATCAATGGATTCTGCTTCTTTCTTCCTTGATAAAAGCATTGGTGCAGACTCCCCCATTTCTGATCTGATTTCATTGCTGGTTGCAGTTGATGCAGTTTCCCATGTGGATGGACTGGATGATCTTCATAAACAGGTTCTTATGAAGGCTTTCTACTCTGTATCCAATTGTATCTTTATACTTAAGTGCATG

Coding sequence (CDS)

CAGGCTTCTTCAAAAAATGTGAAGAATAGGAAAGCTTACACATCTAATGTTGCTGAATTTGATCTGGTGATTCAGACAACTAAGGCTGGGACTCATAGTTCAGTGTCTTGTTTGAAAGAAGAAACATGCCTTCCATTAGGTGGATACAGTGTCTGGACGTTGCTTCCTCCAATCAATATTTCTTCCTCAGATCAGTCTAAGCCCACCATTCTAACGGTAGCATCAATGGATTCTGCTTCTTTCTTCCTTGATAAAAGCATTGGTGCAGACTCCCCCATTTCTGATCTGATTTCATTGCTGGTTGCAGTTGATGCAGTTTCCCATGTGGATGGACTGGATGATCTTCATAAACAGGTTCTTATGAAGGCTTTCTACTCTGTATCCAATTGTATCTTTATACTTAAGTGCATG

Protein sequence

QASSKNVKNRKAYTSNVAEFDLVIQTTKAGTHSSVSCLKEETCLPLGGYSVWTLLPPINISSSDQSKPTILTVASMDSASFFLDKSIGADSPISDLISLLVAVDAVSHVDGLDDLHKQVLMKAFYSVSNCIFILKCM

Homology

[Close]

BLAST of MS019104 vs. NCBI nr
Match: XP_022143375.1 (nicastrin [Momordica charantia])

HSP 1 Score: 204.1 bits (518), Expect = 7.5e-49
Identity = 106/124 (85.48%), Postives = 115/124 (92.74%), Query Frame = 0


Query: 1   QASSKNVKNRKAYTSNVAEFDLVIQTTKAGTHSSVSCLKEETCLPLGGYSVWTLLPPINI 60
           +ASSKNVKN+KAYTSNVAEFDLV+QTTKAGTH+SVSCLKEETCLPLGGYSVW+ LPPINI
Sbjct: 176 EASSKNVKNKKAYTSNVAEFDLVMQTTKAGTHNSVSCLKEETCLPLGGYSVWSSLPPINI 235

Query: 61  SSSDQSKPTILTVASMDSASFFLDKSIGADSPISDLISLLVAVDAVSHVDGLDDLHKQVL 120
            SSDQSKP ILTVASMDSASFF DKSIGADSPIS LI+LL AVDA+SHVDGLDDLHKQ++
Sbjct: 236 -SSDQSKPIILTVASMDSASFFRDKSIGADSPISGLIALLAAVDALSHVDGLDDLHKQLV 295

Query: 121 MKAF 125
              F
Sbjct: 296 FAVF 298

[Close]

BLAST of MS019104 vs. NCBI nr
Match: KAA0047366.1 (nicastrin isoform X1 [Cucumis melo var. makuwa] >TYK14043.1 nicastrin isoform X1 [Cucumis melo var. makuwa])

HSP 1 Score: 202.2 bits (513), Expect = 2.9e-48
Identity = 103/124 (83.06%), Postives = 113/124 (91.13%), Query Frame = 0


Query: 1   QASSKNVKNRKAYTSNVAEFDLVIQTTKAGTHSSVSCLKEETCLPLGGYSVWTLLPPINI 60
           QA+SKNVK++K Y SNVAEFDLV+QTTKAGTHSS+SCLKEETCLPLGGYSVW+ LPPIN 
Sbjct: 2   QAASKNVKSKKDYVSNVAEFDLVMQTTKAGTHSSMSCLKEETCLPLGGYSVWSSLPPINT 61

Query: 61  SSSDQSKPTILTVASMDSASFFLDKSIGADSPISDLISLLVAVDAVSHVDGLDDLHKQVL 120
           SSSDQSKP ILTVASMDSASFF DKSIGADSPIS LI+LL AVDA+SHVDGLDDLHKQ++
Sbjct: 62  SSSDQSKPVILTVASMDSASFFRDKSIGADSPISGLIALLAAVDALSHVDGLDDLHKQLV 121

Query: 121 MKAF 125
              F
Sbjct: 122 FVVF 125

[Close]

BLAST of MS019104 vs. NCBI nr
Match: XP_008457117.1 (PREDICTED: nicastrin isoform X2 [Cucumis melo])

HSP 1 Score: 201.1 bits (510), Expect = 6.4e-48
Identity = 102/124 (82.26%), Postives = 113/124 (91.13%), Query Frame = 0


Query: 1   QASSKNVKNRKAYTSNVAEFDLVIQTTKAGTHSSVSCLKEETCLPLGGYSVWTLLPPINI 60
           +A+SKNVK++K Y SNVAEFDLV+QTTKAGTHSS+SCLKEETCLPLGGYSVW+ LPPIN 
Sbjct: 193 EAASKNVKSKKDYVSNVAEFDLVMQTTKAGTHSSMSCLKEETCLPLGGYSVWSSLPPINT 252

Query: 61  SSSDQSKPTILTVASMDSASFFLDKSIGADSPISDLISLLVAVDAVSHVDGLDDLHKQVL 120
           SSSDQSKP ILTVASMDSASFF DKSIGADSPIS LI+LL AVDA+SHVDGLDDLHKQ++
Sbjct: 253 SSSDQSKPVILTVASMDSASFFRDKSIGADSPISGLIALLAAVDALSHVDGLDDLHKQLV 312

Query: 121 MKAF 125
              F
Sbjct: 313 FVVF 316

[Close]

BLAST of MS019104 vs. NCBI nr
Match: XP_004140732.1 (nicastrin [Cucumis sativus] >KGN57470.2 hypothetical protein Csa_011284 [Cucumis sativus])

HSP 1 Score: 201.1 bits (510), Expect = 6.4e-48
Identity = 102/124 (82.26%), Postives = 113/124 (91.13%), Query Frame = 0


Query: 1   QASSKNVKNRKAYTSNVAEFDLVIQTTKAGTHSSVSCLKEETCLPLGGYSVWTLLPPINI 60
           +A+SKNVK++K Y SNVAEFDLV+QTTKAGTHSS+SCLKEETCLPLGGYSVW+ LPPIN 
Sbjct: 175 EAASKNVKSKKDYISNVAEFDLVMQTTKAGTHSSMSCLKEETCLPLGGYSVWSSLPPINT 234

Query: 61  SSSDQSKPTILTVASMDSASFFLDKSIGADSPISDLISLLVAVDAVSHVDGLDDLHKQVL 120
           SSSDQSKP ILTVASMDSASFF DKSIGADSPIS LI+LL AVDA+SHVDGLDDLHKQ++
Sbjct: 235 SSSDQSKPVILTVASMDSASFFRDKSIGADSPISGLIALLAAVDALSHVDGLDDLHKQLV 294

Query: 121 MKAF 125
              F
Sbjct: 295 FAVF 298

[Close]

BLAST of MS019104 vs. NCBI nr
Match: XP_008457115.1 (PREDICTED: nicastrin isoform X1 [Cucumis melo])

HSP 1 Score: 201.1 bits (510), Expect = 6.4e-48
Identity = 102/124 (82.26%), Postives = 113/124 (91.13%), Query Frame = 0


Query: 1   QASSKNVKNRKAYTSNVAEFDLVIQTTKAGTHSSVSCLKEETCLPLGGYSVWTLLPPINI 60
           +A+SKNVK++K Y SNVAEFDLV+QTTKAGTHSS+SCLKEETCLPLGGYSVW+ LPPIN 
Sbjct: 193 EAASKNVKSKKDYVSNVAEFDLVMQTTKAGTHSSMSCLKEETCLPLGGYSVWSSLPPINT 252

Query: 61  SSSDQSKPTILTVASMDSASFFLDKSIGADSPISDLISLLVAVDAVSHVDGLDDLHKQVL 120
           SSSDQSKP ILTVASMDSASFF DKSIGADSPIS LI+LL AVDA+SHVDGLDDLHKQ++
Sbjct: 253 SSSDQSKPVILTVASMDSASFFRDKSIGADSPISGLIALLAAVDALSHVDGLDDLHKQLV 312

Query: 121 MKAF 125
              F
Sbjct: 313 FVVF 316

[Close]

BLAST of MS019104 vs. ExPASy Swiss-Prot
Match: Q8GUM5 (Nicastrin OS=Arabidopsis thaliana OX=3702 GN=At3g52640/At3g52650 PE=2 SV=1)

HSP 1 Score: 153.3 bits (386), Expect = 2.0e-36
Identity = 76/117 (64.96%), Postives = 97/117 (82.91%), Query Frame = 0


Query: 4   SKNVKNRKAYTSNVAEFDLVIQTTKAGTHSSVSCLKEETCLPLGGYSVWTLLPPINISSS 63
           SK       YTS+VAEF++V++TTKAGTH+S +CL+E TCLPLGGYSVW+ LPPI++SSS
Sbjct: 187 SKKKMKHGTYTSDVAEFNMVMETTKAGTHNSEACLQEGTCLPLGGYSVWSSLPPISVSSS 246

Query: 64  DQSKPTILTVASMDSASFFLDKSIGADSPISDLISLLVAVDAVSHVDGLDDLHKQVL 121
           +  KP +LTVASMD+ASFF DKS GADSPIS L++LL AVDA+S VDG+ +L KQ++
Sbjct: 247 NNRKPVVLTVASMDTASFFRDKSFGADSPISGLVALLGAVDALSRVDGISNLKKQLV 303

[Close]

BLAST of MS019104 vs. ExPASy Swiss-Prot
Match: Q92542 (Nicastrin OS=Homo sapiens OX=9606 GN=NCSTN PE=1 SV=2)

HSP 1 Score: 49.7 bits (117), Expect = 3.1e-05
Identity = 28/98 (28.57%), Postives = 53/98 (54.08%), Query Frame = 0


Query: 28  KAGTHSSVSCLKEETCLPLGGYSVWTLLPPINISSSDQSKPTILTVAS-MDSASFFLDKS 87
           ++   S+ S   E  C PL  Y+VW++L PIN + + +    ++  A+ +DS SFF + +
Sbjct: 233 RSSIQSTFSINPEIVCDPLSDYNVWSMLKPINTTGTLKPDDRVVVAATRLDSRSFFWNVA 292

Query: 88  IGADSPISDLISLLVAVDAVSHVDGLDDLHKQVLMKAF 125
            GA+S ++  ++ L A +A+     +  L + V+   F
Sbjct: 293 PGAESAVASFVTQLAAAEALQKAPDVTTLPRNVMFVFF 330

[Close]

BLAST of MS019104 vs. ExPASy Swiss-Prot
Match: Q8CGU6 (Nicastrin OS=Rattus norvegicus OX=10116 GN=Ncstn PE=1 SV=1)

HSP 1 Score: 49.3 bits (116), Expect = 4.1e-05
Identity = 29/93 (31.18%), Postives = 50/93 (53.76%), Query Frame = 0


Query: 33  SSVSCLKEETCLPLGGYSVWTLLPPINISSSDQSKPTILTVAS-MDSASFFLDKSIGADS 92
           S+ S   E  C PL  Y+VW++L PIN S   +    ++  A+ +DS SFF + + GA+S
Sbjct: 237 STFSINPEIVCDPLSDYNVWSMLKPINTSGGLEPDVRVVVAATRLDSRSFFWNVAPGAES 296

Query: 93  PISDLISLLVAVDAVSHVDGLDDLHKQVLMKAF 125
            ++  ++ L A +A+     +  L + V+   F
Sbjct: 297 AVASFVTQLAAAEALHKAPDVTTLPRNVMFVFF 329

[Close]

BLAST of MS019104 vs. ExPASy Swiss-Prot
Match: P57716 (Nicastrin OS=Mus musculus OX=10090 GN=Ncstn PE=1 SV=3)

HSP 1 Score: 48.9 bits (115), Expect = 5.3e-05
Identity = 29/93 (31.18%), Postives = 50/93 (53.76%), Query Frame = 0


Query: 33  SSVSCLKEETCLPLGGYSVWTLLPPINISSSDQSKPTILTVAS-MDSASFFLDKSIGADS 92
           S+ S   E  C PL  Y+VW++L PIN S   +    ++  A+ +DS SFF + + GA+S
Sbjct: 237 STFSINPEIVCDPLSDYNVWSMLKPINTSVGLEPDVRVVVAATRLDSRSFFWNVAPGAES 296

Query: 93  PISDLISLLVAVDAVSHVDGLDDLHKQVLMKAF 125
            ++  ++ L A +A+     +  L + V+   F
Sbjct: 297 AVASFVTQLAAAEALHKAPDVTTLSRNVMFVFF 329

[Close]

BLAST of MS019104 vs. ExPASy Swiss-Prot
Match: Q54JT7 (Nicastrin OS=Dictyostelium discoideum OX=44689 GN=ncstn PE=3 SV=2)

HSP 1 Score: 48.5 bits (114), Expect = 6.9e-05
Identity = 32/98 (32.65%), Postives = 50/98 (51.02%), Query Frame = 0


Query: 13  YTSNVAEFDLVIQTTKAGTHSSVSCLKEETCLPLGGYSVWTLLPPINISSSDQSKPTILT 72
           Y +  AE D  +Q    G  ++ +CL+   C P+GG S+W+    +     DQSKP IL 
Sbjct: 182 YPAYGAELDSFMQ----GAINAETCLRRGFCEPVGGQSIWSSFSEV----IDQSKPIILV 241

Query: 73  VASMDSASFFLDKSIGADSPISDLISLLVAVDAVSHVD 111
           +  +D+ +FF D + G D     L  LL  ++ +  VD
Sbjct: 242 MLPIDATAFFRDLATGTDQSGYALTVLLSMLNTLQGVD 271

[Close]

BLAST of MS019104 vs. ExPASy TrEMBL
Match: A0A0A0L8Z5 (Nicastrin OS=Cucumis sativus OX=3659 GN=Csa_3G187280 PE=3 SV=1)

HSP 1 Score: 213.4 bits (542), Expect = 6.0e-52
Identity = 108/134 (80.60%), Postives = 122/134 (91.04%), Query Frame = 0


Query: 1   QASSKNVKNRKAYTSNVAEFDLVIQTTKAGTHSSVSCLKEETCLPLGGYSVWTLLPPINI 60
           +A+SKNVK++K Y SNVAEFDLV+QTTKAGTHSS+SCLKEETCLPLGGYSVW+ LPPIN 
Sbjct: 22  EAASKNVKSKKDYISNVAEFDLVMQTTKAGTHSSMSCLKEETCLPLGGYSVWSSLPPINT 81

Query: 61  SSSDQSKPTILTVASMDSASFFLDKSIGADSPISDLISLLVAVDAVSHVDGLDDLHKQVL 120
           SSSDQSKP ILTVASMDSASFF DKSIGADSPIS LI+LL AVDA+SHVDGLDDLHKQVL
Sbjct: 82  SSSDQSKPVILTVASMDSASFFRDKSIGADSPISGLIALLAAVDALSHVDGLDDLHKQVL 141

Query: 121 MKAFYSVSNCIFIL 135
           ++A + V NC F++
Sbjct: 142 IEAVFFVYNCTFLI 155

[Close]

BLAST of MS019104 vs. ExPASy TrEMBL
Match: A0A6J1CNM4 (Nicastrin OS=Momordica charantia OX=3673 GN=LOC111013258 PE=3 SV=1)

HSP 1 Score: 204.1 bits (518), Expect = 3.6e-49
Identity = 106/124 (85.48%), Postives = 115/124 (92.74%), Query Frame = 0


Query: 1   QASSKNVKNRKAYTSNVAEFDLVIQTTKAGTHSSVSCLKEETCLPLGGYSVWTLLPPINI 60
           +ASSKNVKN+KAYTSNVAEFDLV+QTTKAGTH+SVSCLKEETCLPLGGYSVW+ LPPINI
Sbjct: 176 EASSKNVKNKKAYTSNVAEFDLVMQTTKAGTHNSVSCLKEETCLPLGGYSVWSSLPPINI 235

Query: 61  SSSDQSKPTILTVASMDSASFFLDKSIGADSPISDLISLLVAVDAVSHVDGLDDLHKQVL 120
            SSDQSKP ILTVASMDSASFF DKSIGADSPIS LI+LL AVDA+SHVDGLDDLHKQ++
Sbjct: 236 -SSDQSKPIILTVASMDSASFFRDKSIGADSPISGLIALLAAVDALSHVDGLDDLHKQLV 295

Query: 121 MKAF 125
              F
Sbjct: 296 FAVF 298

[Close]

BLAST of MS019104 vs. ExPASy TrEMBL
Match: A0A5D3CQA8 (Nicastrin isoform X1 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold363G00120 PE=4 SV=1)

HSP 1 Score: 202.2 bits (513), Expect = 1.4e-48
Identity = 103/124 (83.06%), Postives = 113/124 (91.13%), Query Frame = 0


Query: 1   QASSKNVKNRKAYTSNVAEFDLVIQTTKAGTHSSVSCLKEETCLPLGGYSVWTLLPPINI 60
           QA+SKNVK++K Y SNVAEFDLV+QTTKAGTHSS+SCLKEETCLPLGGYSVW+ LPPIN 
Sbjct: 2   QAASKNVKSKKDYVSNVAEFDLVMQTTKAGTHSSMSCLKEETCLPLGGYSVWSSLPPINT 61

Query: 61  SSSDQSKPTILTVASMDSASFFLDKSIGADSPISDLISLLVAVDAVSHVDGLDDLHKQVL 120
           SSSDQSKP ILTVASMDSASFF DKSIGADSPIS LI+LL AVDA+SHVDGLDDLHKQ++
Sbjct: 62  SSSDQSKPVILTVASMDSASFFRDKSIGADSPISGLIALLAAVDALSHVDGLDDLHKQLV 121

Query: 121 MKAF 125
              F
Sbjct: 122 FVVF 125

[Close]

BLAST of MS019104 vs. ExPASy TrEMBL
Match: A0A1S3C4C7 (Nicastrin OS=Cucumis melo OX=3656 GN=LOC103496866 PE=3 SV=1)

HSP 1 Score: 201.1 bits (510), Expect = 3.1e-48
Identity = 102/124 (82.26%), Postives = 113/124 (91.13%), Query Frame = 0


Query: 1   QASSKNVKNRKAYTSNVAEFDLVIQTTKAGTHSSVSCLKEETCLPLGGYSVWTLLPPINI 60
           +A+SKNVK++K Y SNVAEFDLV+QTTKAGTHSS+SCLKEETCLPLGGYSVW+ LPPIN 
Sbjct: 193 EAASKNVKSKKDYVSNVAEFDLVMQTTKAGTHSSMSCLKEETCLPLGGYSVWSSLPPINT 252

Query: 61  SSSDQSKPTILTVASMDSASFFLDKSIGADSPISDLISLLVAVDAVSHVDGLDDLHKQVL 120
           SSSDQSKP ILTVASMDSASFF DKSIGADSPIS LI+LL AVDA+SHVDGLDDLHKQ++
Sbjct: 253 SSSDQSKPVILTVASMDSASFFRDKSIGADSPISGLIALLAAVDALSHVDGLDDLHKQLV 312

Query: 121 MKAF 125
              F
Sbjct: 313 FVVF 316

[Close]

BLAST of MS019104 vs. ExPASy TrEMBL
Match: A0A1S3C4S1 (Nicastrin OS=Cucumis melo OX=3656 GN=LOC103496866 PE=3 SV=1)

HSP 1 Score: 201.1 bits (510), Expect = 3.1e-48
Identity = 102/124 (82.26%), Postives = 113/124 (91.13%), Query Frame = 0


Query: 1   QASSKNVKNRKAYTSNVAEFDLVIQTTKAGTHSSVSCLKEETCLPLGGYSVWTLLPPINI 60
           +A+SKNVK++K Y SNVAEFDLV+QTTKAGTHSS+SCLKEETCLPLGGYSVW+ LPPIN 
Sbjct: 193 EAASKNVKSKKDYVSNVAEFDLVMQTTKAGTHSSMSCLKEETCLPLGGYSVWSSLPPINT 252

Query: 61  SSSDQSKPTILTVASMDSASFFLDKSIGADSPISDLISLLVAVDAVSHVDGLDDLHKQVL 120
           SSSDQSKP ILTVASMDSASFF DKSIGADSPIS LI+LL AVDA+SHVDGLDDLHKQ++
Sbjct: 253 SSSDQSKPVILTVASMDSASFFRDKSIGADSPISGLIALLAAVDALSHVDGLDDLHKQLV 312

Query: 121 MKAF 125
              F
Sbjct: 313 FVVF 316

[Close]

BLAST of MS019104 vs. TAIR 10
Match: AT3G52640.2 (Zn-dependent exopeptidases superfamily protein )

HSP 1 Score: 153.3 bits (386), Expect = 1.4e-37
Identity = 76/117 (64.96%), Postives = 97/117 (82.91%), Query Frame = 0


Query: 4   SKNVKNRKAYTSNVAEFDLVIQTTKAGTHSSVSCLKEETCLPLGGYSVWTLLPPINISSS 63
           SK       YTS+VAEF++V++TTKAGTH+S +CL+E TCLPLGGYSVW+ LPPI++SSS
Sbjct: 187 SKKKMKHGTYTSDVAEFNMVMETTKAGTHNSEACLQEGTCLPLGGYSVWSSLPPISVSSS 246

Query: 64  DQSKPTILTVASMDSASFFLDKSIGADSPISDLISLLVAVDAVSHVDGLDDLHKQVL 121
           +  KP +LTVASMD+ASFF DKS GADSPIS L++LL AVDA+S VDG+ +L KQ++
Sbjct: 247 NNRKPVVLTVASMDTASFFRDKSFGADSPISGLVALLGAVDALSRVDGISNLKKQLV 303

[Close]

BLAST of MS019104 vs. TAIR 10
Match: AT3G52640.1 (Zn-dependent exopeptidases superfamily protein )

HSP 1 Score: 153.3 bits (386), Expect = 1.4e-37
Identity = 76/117 (64.96%), Postives = 97/117 (82.91%), Query Frame = 0


Query: 4   SKNVKNRKAYTSNVAEFDLVIQTTKAGTHSSVSCLKEETCLPLGGYSVWTLLPPINISSS 63
           SK       YTS+VAEF++V++TTKAGTH+S +CL+E TCLPLGGYSVW+ LPPI++SSS
Sbjct: 187 SKKKMKHGTYTSDVAEFNMVMETTKAGTHNSEACLQEGTCLPLGGYSVWSSLPPISVSSS 246

Query: 64  DQSKPTILTVASMDSASFFLDKSIGADSPISDLISLLVAVDAVSHVDGLDDLHKQVL 121
           +  KP +LTVASMD+ASFF DKS GADSPIS L++LL AVDA+S VDG+ +L KQ++
Sbjct: 247 NNRKPVVLTVASMDTASFFRDKSFGADSPISGLVALLGAVDALSRVDGISNLKKQLV 303

[Close]

BLAST of MS019104 vs. TAIR 10
Match: AT3G52640.3 (Zn-dependent exopeptidases superfamily protein )

HSP 1 Score: 153.3 bits (386), Expect = 1.4e-37
Identity = 76/117 (64.96%), Postives = 97/117 (82.91%), Query Frame = 0


Query: 4   SKNVKNRKAYTSNVAEFDLVIQTTKAGTHSSVSCLKEETCLPLGGYSVWTLLPPINISSS 63
           SK       YTS+VAEF++V++TTKAGTH+S +CL+E TCLPLGGYSVW+ LPPI++SSS
Sbjct: 187 SKKKMKHGTYTSDVAEFNMVMETTKAGTHNSEACLQEGTCLPLGGYSVWSSLPPISVSSS 246

Query: 64  DQSKPTILTVASMDSASFFLDKSIGADSPISDLISLLVAVDAVSHVDGLDDLHKQVL 121
           +  KP +LTVASMD+ASFF DKS GADSPIS L++LL AVDA+S VDG+ +L KQ++
Sbjct: 247 NNRKPVVLTVASMDTASFFRDKSFGADSPISGLVALLGAVDALSRVDGISNLKKQLV 303

The following BLAST results are available for this feature:

BLAST of MS019104 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022143375.1	7.5e-49	85.48	nicastrin [Momordica charantia]	[more]
KAA0047366.1	2.9e-48	83.06	nicastrin isoform X1 [Cucumis melo var. makuwa] >TYK14043.1 nicastrin isoform X1...	[more]
XP_008457117.1	6.4e-48	82.26	PREDICTED: nicastrin isoform X2 [Cucumis melo]	[more]
XP_004140732.1	6.4e-48	82.26	nicastrin [Cucumis sativus] >KGN57470.2 hypothetical protein Csa_011284 [Cucumis...	[more]
XP_008457115.1	6.4e-48	82.26	PREDICTED: nicastrin isoform X1 [Cucumis melo]	[more]

BLAST of MS019104 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q8GUM5	2.0e-36	64.96	Nicastrin OS=Arabidopsis thaliana OX=3702 GN=At3g52640/At3g52650 PE=2 SV=1	[more]
Q92542	3.1e-05	28.57	Nicastrin OS=Homo sapiens OX=9606 GN=NCSTN PE=1 SV=2	[more]
Q8CGU6	4.1e-05	31.18	Nicastrin OS=Rattus norvegicus OX=10116 GN=Ncstn PE=1 SV=1	[more]
P57716	5.3e-05	31.18	Nicastrin OS=Mus musculus OX=10090 GN=Ncstn PE=1 SV=3	[more]
Q54JT7	6.9e-05	32.65	Nicastrin OS=Dictyostelium discoideum OX=44689 GN=ncstn PE=3 SV=2	[more]

BLAST of MS019104 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0L8Z5	6.0e-52	80.60	Nicastrin OS=Cucumis sativus OX=3659 GN=Csa_3G187280 PE=3 SV=1	[more]
A0A6J1CNM4	3.6e-49	85.48	Nicastrin OS=Momordica charantia OX=3673 GN=LOC111013258 PE=3 SV=1	[more]
A0A5D3CQA8	1.4e-48	83.06	Nicastrin isoform X1 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold363...	[more]
A0A1S3C4C7	3.1e-48	82.26	Nicastrin OS=Cucumis melo OX=3656 GN=LOC103496866 PE=3 SV=1	[more]
A0A1S3C4S1	3.1e-48	82.26	Nicastrin OS=Cucumis melo OX=3656 GN=LOC103496866 PE=3 SV=1	[more]

BLAST of MS019104 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G52640.2	1.4e-37	64.96	Zn-dependent exopeptidases superfamily protein	[more]
AT3G52640.1	1.4e-37	64.96	Zn-dependent exopeptidases superfamily protein	[more]
AT3G52640.3	1.4e-37	64.96	Zn-dependent exopeptidases superfamily protein	[more]

InterPro

Analysis Name: InterPro Annotations of Bitter gourd (TR) v1
Date Performed: 2021-10-25

Position :

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IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PFAM	PF05450	Nicastrin	coord: 69..124 e-value: 3.5E-11 score: 43.0
IPR008710	Nicastrin	PANTHER	PTHR21092	NICASTRIN	coord: 2..123

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
MS019104.1	MS019104.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0016485	protein processing
cellular_component	GO:0016021	integral component of membrane