MS019103 (gene) Bitter gourd (TR) v1

Overview


Name	MS019103
Type	gene
Organism	Momordica charantia cv. TR (Bitter gourd (TR) v1)
Description	Reverse transcriptase domain-containing protein
Location	scaffold20: 1486448 .. 1486892 (+)
RNA-Seq Expression	MS019103
Synteny	MS019103

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

CAGGCAACCCCTTGTTACTCTATGTCATGTTTCAGGCTCCCCAAAAATCTTATTCATGAGATCAATTCCTTAATAGCTCGGTTTTGGTGGGGGTGACAATGATAGGGAGAATAAAATCCATAGGATTGGATGGAAGACCTTATGTAAGCCAAAATGTCAAGGGGGAATGGGATTCCGTGACCTTGAACTTTTCAATAAGGCTTTGCTCGCTAAGCAGGGATGGAGAATATTGAATGAACCTAACTCTATGTTGGCGCAGGTCCTTAAGGGACGATACTTCAAAGACGGTACTTTCCTTTCGGCCAAGGTGGGTGGGAACCCATCCTTTATCTTGAGAAGCTTGTTGTGGGGAAGATCGTTGCTCACAGAGGGGGGTCGTTGGCGCATTGGGAATGGGGGGACGGTGAGGATTTATAGGGATAACTGGTTTCCAAATTATCCATCC

mRNA sequence

CAGGCAACCCCTTGTTACTCTATGTCATGTTTCAGGCTCCCCAAAAATCTTATTCATGAGATCAATTCCTTAATAGCTCGGTTTTGGTGGGACAATGATAGGGAGAATAAAATCCATAGGATTGGATGGAAGACCTTATGTAAGCCAAAATGTCAAGGGGGAATGGGATTCCGTGACCTTGAACTTTTCAATAAGGCTTTGCTCGCTAAGCAGGGATGGAGAATATTGAATGAACCTAACTCTATGTTGGCGCAGGTCCTTAAGGGACGATACTTCAAAGACGGTACTTTCCTTTCGGCCAAGGTGGGTGGGAACCCATCCTTTATCTTGAGAAGCTTGTTGTGGGGAAGATCGTTGCTCACAGAGGGGGGTCGTTGGCGCATTGGGAATGGGGGGACGGTGAGGATTTATAGGGATAACTGGTTTCCAAATTATCCATCC

Coding sequence (CDS)

CAGGCAACCCCTTGTTACTCTATGTCATGTTTCAGGCTCCCCAAAAATCTTATTCATGAGATCAATTCCTTAATAGCTCGGTTTTGGTGGGACAATGATAGGGAGAATAAAATCCATAGGATTGGATGGAAGACCTTATGTAAGCCAAAATGTCAAGGGGGAATGGGATTCCGTGACCTTGAACTTTTCAATAAGGCTTTGCTCGCTAAGCAGGGATGGAGAATATTGAATGAACCTAACTCTATGTTGGCGCAGGTCCTTAAGGGACGATACTTCAAAGACGGTACTTTCCTTTCGGCCAAGGTGGGTGGGAACCCATCCTTTATCTTGAGAAGCTTGTTGTGGGGAAGATCGTTGCTCACAGAGGGGGGTCGTTGGCGCATTGGGAATGGGGGGACGGTGAGGATTTATAGGGATAACTGGTTTCCAAATTATCCATCC

Protein sequence

QATPCYSMSCFRLPKNLIHEINSLIARFWWDNDRENKIHRIGWKTLCKPKCQGGMGFRDLELFNKALLAKQGWRILNEPNSMLAQVLKGRYFKDGTFLSAKVGGNPSFILRSLLWGRSLLTEGGRWRIGNGGTVRIYRDNWFPNYPS

Homology

[Close]

BLAST of MS019103 vs. NCBI nr
Match: XP_022150918.1 (uncharacterized protein LOC111018954 [Momordica charantia])

HSP 1 Score: 227.6 bits (579), Expect = 6.8e-56
Identity = 101/148 (68.24%), Postives = 120/148 (81.08%), Query Frame = 0


Query: 1   QATPCYSMSCFRLPKNLIHEINSLIARFWWDNDREN-KIHRIGWKTLCKPKCQGGMGFRD 60
           QA PCY+MSCFRLPK LI E + + ARFWW + +E+ KIH + W +L  PKC+GGMGFRD
Sbjct: 591 QAIPCYTMSCFRLPKRLIREFHHITARFWWGSSKEDKKIHWVAWNSLYLPKCEGGMGFRD 650

Query: 61  LELFNKALLAKQGWRILNEPNSMLAQVLKGRYFKDGTFLSAKVGGNPSFILRSLLWGRSL 120
           LELFNKALLAKQ WRILN PNSML++VLKGRYFKD +F+ AK+ GNPS+I RS+LWGR L
Sbjct: 651 LELFNKALLAKQCWRILNHPNSMLSRVLKGRYFKDCSFMEAKISGNPSYIWRSILWGRDL 710

Query: 121 LTEGGRWRIGNGGTVRIYRDNWFPNYPS 148
           L +G RWRIGNG +V IY DNW PN P+
Sbjct: 711 LKKGLRWRIGNGDSVFIYGDNWVPNQPT 738

[Close]

BLAST of MS019103 vs. NCBI nr
Match: XP_022159001.1 (uncharacterized protein LOC111025446 [Momordica charantia])

HSP 1 Score: 203.8 bits (517), Expect = 1.1e-48
Identity = 93/141 (65.96%), Postives = 111/141 (78.72%), Query Frame = 0


Query: 8   MSCFRLPKNLIHEINSLIARFWWDNDREN-KIHRIGWKTLCKPKCQGGMGFRDLELFNKA 67
           MSCFRLPK  I+E++ + ARFWW +  E+ KIH +GW TL KPK  GGMGFRDLELFNKA
Sbjct: 1   MSCFRLPKKFINELHQVAARFWWRSGGEDKKIHWLGWNTLRKPKFCGGMGFRDLELFNKA 60

Query: 68  LLAKQGWRILNEPNSMLAQVLKGRYFKDGTFLSAKVGGNPSFILRSLLWGRSLLTEGGRW 127
           LLAKQ WRILN P+S+LA+VLKGRYF++   L A++ G+PSFI RSL+WG  LL +G RW
Sbjct: 61  LLAKQSWRILNNPDSVLAKVLKGRYFRNCDLLQAEIRGSPSFIWRSLVWGSELLKDGLRW 120

Query: 128 RIGNGGTVRIYRDNWFPNYPS 148
           RIGNG  V +YRDNW PN PS
Sbjct: 121 RIGNGENVNVYRDNWVPNQPS 141

[Close]

BLAST of MS019103 vs. NCBI nr
Match: XP_022145148.1 (uncharacterized protein LOC111014662 [Momordica charantia])

HSP 1 Score: 193.7 bits (491), Expect = 1.1e-45
Identity = 87/142 (61.27%), Postives = 107/142 (75.35%), Query Frame = 0


Query: 1   QATPCYSMSCFRLPKNLIHEINSLIARFWW-DNDRENKIHRIGWKTLCKPKCQGGMGFRD 60
           QA P YSMSCFR P NL  EINSL ARFWW  NDRE KIH   WK LC  K QGG+GF+D
Sbjct: 86  QAIPNYSMSCFRFPMNLCKEINSLYARFWWGSNDREKKIHWPSWKRLCVSKEQGGLGFKD 145

Query: 61  LELFNKALLAKQGWRILNEPNSMLAQVLKGRYFKDGTFLSAKVGGNPSFILRSLLWGRSL 120
           L +FN+A+LAKQ W+I+  PNS+L +VL+G+YFK G F++A++G NPSF+ RS+LWG+ L
Sbjct: 146 LCIFNQAMLAKQSWQIIKNPNSLLVRVLRGKYFKHGNFMTAELGSNPSFVWRSILWGKEL 205

Query: 121 LTEGGRWRIGNGGTVRIYRDNW 142
             +G RWRIGNG +V I  D W
Sbjct: 206 FVKGIRWRIGNGFSVIIGSDPW 227

[Close]

BLAST of MS019103 vs. NCBI nr
Match: XP_030505362.1 (uncharacterized protein LOC115720349 [Cannabis sativa])

HSP 1 Score: 186.4 bits (472), Expect = 1.7e-43
Identity = 82/144 (56.94%), Postives = 104/144 (72.22%), Query Frame = 0


Query: 1   QATPCYSMSCFRLPKNLIHEINSLIARFWWDNDREN-KIHRIGWKTLCKPKCQGGMGFRD 60
           QA P YSMSCFRLPK LIH ++SL A FWW + +EN KIH   W  LCKPK +GG+GFR 
Sbjct: 379 QAIPSYSMSCFRLPKKLIHSLHSLAANFWWGDTKENKKIHWSTWAKLCKPKEEGGLGFRS 438

Query: 61  LELFNKALLAKQGWRILNEPNSMLAQVLKGRYFKDGTFLSAKVGGNPSFILRSLLWGRSL 120
           L  FN+ALLAKQGWR+++ P+S+LA+VLK  Y+ + +FL AK     S I + + WGR +
Sbjct: 439 LTEFNQALLAKQGWRLIHHPHSLLARVLKHSYYPNSSFLQAKCQPGASSIWQGITWGRQI 498

Query: 121 LTEGGRWRIGNGGTVRIYRDNWFP 144
           + EG RWR+GNG TVRI+ D W P
Sbjct: 499 IVEGARWRVGNGRTVRIWEDKWIP 522

[Close]

BLAST of MS019103 vs. NCBI nr
Match: VVA32947.1 (PREDICTED: retrotransposon [Prunus dulcis])

HSP 1 Score: 185.3 bits (469), Expect = 3.9e-43
Identity = 80/144 (55.56%), Postives = 104/144 (72.22%), Query Frame = 0


Query: 1   QATPCYSMSCFRLPKNLIHEINSLIARFWWDNDRENK-IHRIGWKTLCKPKCQGGMGFRD 60
           QA P YSMSCFR+PK L  E+N ++ARFWW   ++ + IH + W+ LCK K  GG+GFRD
Sbjct: 730 QAIPTYSMSCFRIPKGLCKELNGIMARFWWAKAKDKRGIHWVKWELLCKSKFAGGLGFRD 789

Query: 61  LELFNKALLAKQGWRILNEPNSMLAQVLKGRYFKDGTFLSAKVGGNPSFILRSLLWGRSL 120
           LE FN+ALLAKQ WRIL  P S++A++ + RY     FL A+VG NPSFI RSL WG+ L
Sbjct: 790 LEAFNQALLAKQCWRILRTPESLVARIFRARYHPSVPFLEAEVGTNPSFIWRSLQWGKEL 849

Query: 121 LTEGGRWRIGNGGTVRIYRDNWFP 144
           L +G RWR+GNG ++++Y D W P
Sbjct: 850 LNKGLRWRVGNGVSIQVYTDKWLP 873

[Close]

BLAST of MS019103 vs. ExPASy Swiss-Prot
Match: P93295 (Uncharacterized mitochondrial protein AtMg00310 OS=Arabidopsis thaliana OX=3702 GN=AtMg00310 PE=4 SV=1)

HSP 1 Score: 133.3 bits (334), Expect = 2.3e-30
Identity = 61/142 (42.96%), Postives = 93/142 (65.49%), Query Frame = 0


Query: 2   ATPCYSMSCFRLPKNLIHEINSLIARFWWDN-DRENKIHRIGWKTLCKPK-CQGGMGFRD 61
           A P Y+MSCFRL K L  ++ S +  FWW + + + KI  + W+ LCK K   GG+GFRD
Sbjct: 2   ALPVYAMSCFRLSKLLCKKLTSAMTEFWWSSCENKRKISWVAWQKLCKSKEDDGGLGFRD 61

Query: 62  LELFNKALLAKQGWRILNEPNSMLAQVLKGRYFKDGTFLSAKVGGNPSFILRSLLWGRSL 121
           L  FN+ALLAKQ +RI+++P+++L+++L+ RYF   + +   VG  PS+  RS++ GR L
Sbjct: 62  LGWFNQALLAKQSFRIIHQPHTLLSRLLRSRYFPHSSMMECSVGTRPSYAWRSIIHGREL 121

Query: 122 LTEGGRWRIGNGGTVRIYRDNW 142
           L+ G    IG+G   +++ D W
Sbjct: 122 LSRGLLRTIGDGIHTKVWLDRW 143

[Close]

BLAST of MS019103 vs. ExPASy Swiss-Prot
Match: P0C2F6 (Putative ribonuclease H protein At1g65750 OS=Arabidopsis thaliana OX=3702 GN=At1g65750 PE=3 SV=1)

HSP 1 Score: 97.1 bits (240), Expect = 1.8e-19
Identity = 51/149 (34.23%), Postives = 82/149 (55.03%), Query Frame = 0


Query: 4   PCYSMSCFRLPKNLIHEINSLIARFWWDNDRE-NKIHRIGWKTLCKPKCQGGMGFRDLEL 63
           P +SMS   LP+++++ ++ L   F W +  E  K H + W  +C PK +GG+G R  + 
Sbjct: 49  PVHSMSTILLPQSILNRLDQLSRTFLWGSTAEKKKQHLVKWSKVCSPKKEGGLGVRAAKS 108

Query: 64  FNKALLAKQGWRILNEPNSMLAQVLKGRY----FKDGTFLSAKVGGNPSFILRSLLWG-R 123
            N+AL++K GWR+L E NS+   VL+ +Y     +D  +L  K  G+ S   RS+  G R
Sbjct: 109 MNRALISKVGWRLLQEKNSLWTLVLQKKYHVGEIRDSRWLIPK--GSWSSTWRSIAIGLR 168

Query: 124 SLLTEGGRWRIGNGGTVRIYRDNWFPNYP 147
            +++ G  W  G+G  +R + D W    P
Sbjct: 169 DVVSHGVGWIPGDGQQIRFWTDRWVSGKP 195

[Close]

BLAST of MS019103 vs. ExPASy TrEMBL
Match: A0A6J1DAR4 (uncharacterized protein LOC111018954 OS=Momordica charantia OX=3673 GN=LOC111018954 PE=4 SV=1)

HSP 1 Score: 227.6 bits (579), Expect = 3.3e-56
Identity = 101/148 (68.24%), Postives = 120/148 (81.08%), Query Frame = 0


Query: 1   QATPCYSMSCFRLPKNLIHEINSLIARFWWDNDREN-KIHRIGWKTLCKPKCQGGMGFRD 60
           QA PCY+MSCFRLPK LI E + + ARFWW + +E+ KIH + W +L  PKC+GGMGFRD
Sbjct: 591 QAIPCYTMSCFRLPKRLIREFHHITARFWWGSSKEDKKIHWVAWNSLYLPKCEGGMGFRD 650

Query: 61  LELFNKALLAKQGWRILNEPNSMLAQVLKGRYFKDGTFLSAKVGGNPSFILRSLLWGRSL 120
           LELFNKALLAKQ WRILN PNSML++VLKGRYFKD +F+ AK+ GNPS+I RS+LWGR L
Sbjct: 651 LELFNKALLAKQCWRILNHPNSMLSRVLKGRYFKDCSFMEAKISGNPSYIWRSILWGRDL 710

Query: 121 LTEGGRWRIGNGGTVRIYRDNWFPNYPS 148
           L +G RWRIGNG +V IY DNW PN P+
Sbjct: 711 LKKGLRWRIGNGDSVFIYGDNWVPNQPT 738

[Close]

BLAST of MS019103 vs. ExPASy TrEMBL
Match: A0A6J1E2L3 (uncharacterized protein LOC111025446 OS=Momordica charantia OX=3673 GN=LOC111025446 PE=4 SV=1)

HSP 1 Score: 203.8 bits (517), Expect = 5.1e-49
Identity = 93/141 (65.96%), Postives = 111/141 (78.72%), Query Frame = 0


Query: 8   MSCFRLPKNLIHEINSLIARFWWDNDREN-KIHRIGWKTLCKPKCQGGMGFRDLELFNKA 67
           MSCFRLPK  I+E++ + ARFWW +  E+ KIH +GW TL KPK  GGMGFRDLELFNKA
Sbjct: 1   MSCFRLPKKFINELHQVAARFWWRSGGEDKKIHWLGWNTLRKPKFCGGMGFRDLELFNKA 60

Query: 68  LLAKQGWRILNEPNSMLAQVLKGRYFKDGTFLSAKVGGNPSFILRSLLWGRSLLTEGGRW 127
           LLAKQ WRILN P+S+LA+VLKGRYF++   L A++ G+PSFI RSL+WG  LL +G RW
Sbjct: 61  LLAKQSWRILNNPDSVLAKVLKGRYFRNCDLLQAEIRGSPSFIWRSLVWGSELLKDGLRW 120

Query: 128 RIGNGGTVRIYRDNWFPNYPS 148
           RIGNG  V +YRDNW PN PS
Sbjct: 121 RIGNGENVNVYRDNWVPNQPS 141

[Close]

BLAST of MS019103 vs. ExPASy TrEMBL
Match: A0A6J1CV63 (uncharacterized protein LOC111014662 OS=Momordica charantia OX=3673 GN=LOC111014662 PE=4 SV=1)

HSP 1 Score: 193.7 bits (491), Expect = 5.3e-46
Identity = 87/142 (61.27%), Postives = 107/142 (75.35%), Query Frame = 0


Query: 1   QATPCYSMSCFRLPKNLIHEINSLIARFWW-DNDRENKIHRIGWKTLCKPKCQGGMGFRD 60
           QA P YSMSCFR P NL  EINSL ARFWW  NDRE KIH   WK LC  K QGG+GF+D
Sbjct: 86  QAIPNYSMSCFRFPMNLCKEINSLYARFWWGSNDREKKIHWPSWKRLCVSKEQGGLGFKD 145

Query: 61  LELFNKALLAKQGWRILNEPNSMLAQVLKGRYFKDGTFLSAKVGGNPSFILRSLLWGRSL 120
           L +FN+A+LAKQ W+I+  PNS+L +VL+G+YFK G F++A++G NPSF+ RS+LWG+ L
Sbjct: 146 LCIFNQAMLAKQSWQIIKNPNSLLVRVLRGKYFKHGNFMTAELGSNPSFVWRSILWGKEL 205

Query: 121 LTEGGRWRIGNGGTVRIYRDNW 142
             +G RWRIGNG +V I  D W
Sbjct: 206 FVKGIRWRIGNGFSVIIGSDPW 227

[Close]

BLAST of MS019103 vs. ExPASy TrEMBL
Match: A0A803PAN7 (Uncharacterized protein OS=Cannabis sativa OX=3483 PE=4 SV=1)

HSP 1 Score: 191.4 bits (485), Expect = 2.6e-45
Identity = 84/145 (57.93%), Postives = 111/145 (76.55%), Query Frame = 0


Query: 1    QATPCYSMSCFRLPKNLIHEINSLIARFWW-DNDRENKIHRIGWKTLCKPKCQGGMGFRD 60
            QA P Y MSCFRLPK LI +I++++ARFWW  ++ +NKIH   W+ LCKPK +GGMGF+D
Sbjct: 999  QAIPTYVMSCFRLPKELIKDIHAMMARFWWGSSESKNKIHWGRWEKLCKPKDKGGMGFKD 1058

Query: 61   LELFNKALLAKQGWRILNEPNSMLAQVLKGRYFKDGTFLSAKVGGNPSFILRSLLWGRSL 120
            LE FN++LLAKQGW+I+N P+S+LAQVLK  YF + TF+ AK+GG  SF+ RS+LWGR +
Sbjct: 1059 LEKFNQSLLAKQGWKIINNPSSLLAQVLKACYFTNSTFMDAKLGGFCSFMWRSILWGRKI 1118

Query: 121  LTEGGRWRIGNGGTVRIYRDNWFPN 145
            +  G RWR+ +G  VRI  D W P+
Sbjct: 1119 VERGARWRVQSGREVRINEDKWLPH 1143

[Close]

BLAST of MS019103 vs. ExPASy TrEMBL
Match: A0A803NGK5 (Uncharacterized protein OS=Cannabis sativa OX=3483 PE=4 SV=1)

HSP 1 Score: 188.7 bits (478), Expect = 1.7e-44
Identity = 84/144 (58.33%), Postives = 109/144 (75.69%), Query Frame = 0


Query: 1   QATPCYSMSCFRLPKNLIHEINSLIARFWW-DNDRENKIHRIGWKTLCKPKCQGGMGFRD 60
           QA P Y MSCFRLPK LI++I+ ++ARFWW  +D ++KIH   WK LCKPK +GGMGF+D
Sbjct: 60  QAIPTYVMSCFRLPKELINDIHKMMARFWWGSSDSKSKIHWGKWKKLCKPKDEGGMGFKD 119

Query: 61  LELFNKALLAKQGWRILNEPNSMLAQVLKGRYFKDGTFLSAKVGGNPSFILRSLLWGRSL 120
           LE FN+ALLAKQGW+I+N P+SMLA+VLK  Y+ + +FL AKVGG  SF+ RS+LWGR +
Sbjct: 120 LEKFNQALLAKQGWKIINNPHSMLARVLKACYYTNSSFLEAKVGGYGSFMWRSILWGRKI 179

Query: 121 LTEGGRWRIGNGGTVRIYRDNWFP 144
           + +G RWR+  G  + I  D W P
Sbjct: 180 IEKGVRWRVILGRDIHINEDKWIP 203

[Close]

BLAST of MS019103 vs. TAIR 10
Match: AT4G29090.1 (Ribonuclease H-like superfamily protein )

HSP 1 Score: 137.5 bits (345), Expect = 8.6e-33
Identity = 63/147 (42.86%), Postives = 93/147 (63.27%), Query Frame = 0


Query: 2   ATPCYSMSCFRLPKNLIHEINSLIARFWWDNDRENK-IHRIGWKTLCKPKCQGGMGFRDL 61
           A P Y+M+CF LPK +  +I S++A FWW N +E K +H   W  L   K +GG+GF+D+
Sbjct: 2   ALPTYTMACFLLPKTVCKQIISVLADFWWRNKQEAKGMHWKAWDHLSCYKAEGGIGFKDI 61

Query: 62  ELFNKALLAKQGWRILNEPNSMLAQVLKGRYFKDGTFLSAKVGGNPSFILRSLLWGRSLL 121
           E FN ALL KQ WR+L+ P S++A+V K RYF     L+A +G  PSF+ +S+   + +L
Sbjct: 62  EAFNLALLGKQMWRMLSRPESLMAKVFKSRYFHKSDPLNAPLGSRPSFVWKSIHASQEIL 121

Query: 122 TEGGRWRIGNGGTVRIYRDNWFPNYPS 148
            +G R  +GNG  + I+R  W  + P+
Sbjct: 122 RQGARAVVGNGEDIIIWRHKWLDSKPA 148

[Close]

BLAST of MS019103 vs. TAIR 10
Match: ATMG00310.1 (RNA-directed DNA polymerase (reverse transcriptase)-related family protein )

HSP 1 Score: 133.3 bits (334), Expect = 1.6e-31
Identity = 61/142 (42.96%), Postives = 93/142 (65.49%), Query Frame = 0


Query: 2   ATPCYSMSCFRLPKNLIHEINSLIARFWWDN-DRENKIHRIGWKTLCKPK-CQGGMGFRD 61
           A P Y+MSCFRL K L  ++ S +  FWW + + + KI  + W+ LCK K   GG+GFRD
Sbjct: 2   ALPVYAMSCFRLSKLLCKKLTSAMTEFWWSSCENKRKISWVAWQKLCKSKEDDGGLGFRD 61

Query: 62  LELFNKALLAKQGWRILNEPNSMLAQVLKGRYFKDGTFLSAKVGGNPSFILRSLLWGRSL 121
           L  FN+ALLAKQ +RI+++P+++L+++L+ RYF   + +   VG  PS+  RS++ GR L
Sbjct: 62  LGWFNQALLAKQSFRIIHQPHTLLSRLLRSRYFPHSSMMECSVGTRPSYAWRSIIHGREL 121

Query: 122 LTEGGRWRIGNGGTVRIYRDNW 142
           L+ G    IG+G   +++ D W
Sbjct: 122 LSRGLLRTIGDGIHTKVWLDRW 143

[Close]

BLAST of MS019103 vs. TAIR 10
Match: AT3G24255.1 (RNA-directed DNA polymerase (reverse transcriptase)-related family protein )

HSP 1 Score: 56.6 bits (135), Expect = 1.9e-08
Identity = 37/107 (34.58%), Postives = 51/107 (47.66%), Query Frame = 0


Query: 8   MSCFRLPKNLIHEINSLIARFWWDNDREN-KIHRIGWKTLCKPKCQGGMGFRDLELFNKA 67
           MS FRLP   I EI+S+ + F W     N K  ++ W  +C PK +GG+G R L+  NK 
Sbjct: 82  MSAFRLPSACIKEIDSICSSFLWSGPELNTKKAKVAWSDVCTPKDEGGLGIRSLKEANKG 141

Query: 68  LLAKQGWRILNEP---NSMLAQVLKGRYFKDGTFLSAKV--GGNPSF 109
                 W I       + M  ++LK R    G F+   +  G N SF
Sbjct: 142 SF----WSISGNTTLGSWMWKKILKHRALASG-FVKHDIHNGSNTSF 183

[Close]

BLAST of MS019103 vs. TAIR 10
Match: AT3G09510.1 (Ribonuclease H-like superfamily protein )

HSP 1 Score: 48.9 bits (115), Expect = 4.0e-06
Identity = 27/60 (45.00%), Postives = 36/60 (60.00%), Query Frame = 0


Query: 87  LKGRYFKDGTFLSAKVGGNPSFILRSLLWGRSLLTEGGRWRIGNGGTVRIYRDNWFPNYP 146
           +K RYFKD + L AKV    S+   SLL G +LL +G R  IG+G  +RI  DN   ++P
Sbjct: 1   MKARYFKDVSILDAKVRKQQSYGWASLLDGIALLKKGTRHLIGDGQNIRIGLDNIVDSHP 60

[Close]

BLAST of MS019103 vs. TAIR 10
Match: AT3G25720.1 (RNA-directed DNA polymerase (reverse transcriptase)-related family protein )

HSP 1 Score: 47.8 bits (112), Expect = 9.0e-06
Identity = 31/107 (28.97%), Postives = 48/107 (44.86%), Query Frame = 0


Query: 46  LCKPKCQGGMGFRDLELFNKALLAKQGWRILNEPNSMLAQVLKGRYFKD------GTFLS 105
           +C PK +GG+G R    +N  L  K  WR+ +   S+     +  + +         F +
Sbjct: 18  VCLPKAEGGLGLRWFSEWNTTLNLKLVWRLFSGGGSLWVDWHRYHHLQGLGDASVSKFWT 77

Query: 106 AKVGGNPSFILRSLLWGRSLLTEGGRWRIGNGGTVRIYRDNWFPNYP 147
           ++   + S+  + LL  R L     R  IGNG T R + DNW P  P
Sbjct: 78  SQELVSDSWNWKCLLRLRPLAERFLRCNIGNGLTARFWTDNWTPFGP 124

The following BLAST results are available for this feature:

BLAST of MS019103 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022150918.1	6.8e-56	68.24	uncharacterized protein LOC111018954 [Momordica charantia]	[more]
XP_022159001.1	1.1e-48	65.96	uncharacterized protein LOC111025446 [Momordica charantia]	[more]
XP_022145148.1	1.1e-45	61.27	uncharacterized protein LOC111014662 [Momordica charantia]	[more]
XP_030505362.1	1.7e-43	56.94	uncharacterized protein LOC115720349 [Cannabis sativa]	[more]
VVA32947.1	3.9e-43	55.56	PREDICTED: retrotransposon [Prunus dulcis]	[more]

BLAST of MS019103 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
P93295	2.3e-30	42.96	Uncharacterized mitochondrial protein AtMg00310 OS=Arabidopsis thaliana OX=3702 ...	[more]
P0C2F6	1.8e-19	34.23	Putative ribonuclease H protein At1g65750 OS=Arabidopsis thaliana OX=3702 GN=At1...	[more]

BLAST of MS019103 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1DAR4	3.3e-56	68.24	uncharacterized protein LOC111018954 OS=Momordica charantia OX=3673 GN=LOC111018...	[more]
A0A6J1E2L3	5.1e-49	65.96	uncharacterized protein LOC111025446 OS=Momordica charantia OX=3673 GN=LOC111025...	[more]
A0A6J1CV63	5.3e-46	61.27	uncharacterized protein LOC111014662 OS=Momordica charantia OX=3673 GN=LOC111014...	[more]
A0A803PAN7	2.6e-45	57.93	Uncharacterized protein OS=Cannabis sativa OX=3483 PE=4 SV=1	[more]
A0A803NGK5	1.7e-44	58.33	Uncharacterized protein OS=Cannabis sativa OX=3483 PE=4 SV=1	[more]

BLAST of MS019103 vs. TAIR 10


Match Name	E-value	Identity	Description
AT4G29090.1	8.6e-33	42.86	Ribonuclease H-like superfamily protein	[more]
ATMG00310.1	1.6e-31	42.96	RNA-directed DNA polymerase (reverse transcriptase)-related family protein	[more]
AT3G24255.1	1.9e-08	34.58	RNA-directed DNA polymerase (reverse transcriptase)-related family protein	[more]
AT3G09510.1	4.0e-06	45.00	Ribonuclease H-like superfamily protein	[more]
AT3G25720.1	9.0e-06	28.97	RNA-directed DNA polymerase (reverse transcriptase)-related family protein	[more]

InterPro

Analysis Name: InterPro Annotations of Bitter gourd (TR) v1
Date Performed: 2021-10-25

Position :

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IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PANTHER	PTHR33116:SF45	SUBFAMILY NOT NAMED	coord: 1..145
None	No IPR available	PANTHER	PTHR33116	REVERSE TRANSCRIPTASE ZINC-BINDING DOMAIN-CONTAINING PROTEIN-RELATED-RELATED	coord: 1..145

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
MS019103.1	MS019103.1	mRNA