MS019098 (gene) Bitter gourd (TR) v1

Overview


Name	MS019098
Type	gene
Organism	Momordica charantia cv. TR (Bitter gourd (TR) v1)
Description	Kinesin light chain 3 isoform X1
Location	scaffold20: 1451180 .. 1451816 (-)
RNA-Seq Expression	MS019098
Synteny	MS019098

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

CTCTGTGGTGCAGCTATAATACTTGGAATAAACTCAAATCCTGTCTTTGCTAAGGACACAACATTTAAGCCAAGTTCTGAAAATGGTATTGAAGAGAATGACACTATTGGACTACGCAAAGTGGAGGATGGTTCTGTCATATCAAATATACATACTTCAAAGTGGAGAGTTTTTACAGATACTGCTCGGGACTTGTTTCTGCAGGCAAGCATTATTTCTTTTACCTTCACTAGTTGTTAATTCTTTTATGATTTGCACGCTGAAGTATTGTATTGTTTTTCTTTAATTAGGGAAGACTTGAAGAAGCTGAAAGATGTTTCGTTTCTGCGCTTCAAGAAGCTAAAGAAGGTTTTGGGGAGAGGGATCCTCATGTTGCATCTGCCTTCAACAATCTGGTATGCTAGCTGCTGGATTTTTAAATCTTTTGAAAAATCTATGAGTAAAGACTGCGATGAAATAATGCCATTTATTTCAGATTGGGTAGCATTATTAAAGTGATACTAACAACTACTTTCTTTTTCTATTCCCTTTTTAGGCAGAATTGTATAGAGTCATGAAAAGATATGACAAAGCAGAACCAATGTATTTGGAAGCCATCAACATATTGGAGGAATCCTATGGCTCTGAAGATATAAGG

mRNA sequence

CTCTGTGGTGCAGCTATAATACTTGGAATAAACTCAAATCCTGTCTTTGCTAAGGACACAACATTTAAGCCAAGTTCTGAAAATGGTATTGAAGAGAATGACACTATTGGACTACGCAAAGTGGAGGATGGTTCTGTCATATCAAATATACATACTTCAAAGTGGAGAGTTTTTACAGATACTGCTCGGGACTTGTTTCTGCAGGCAAGCATTATTTCTTTTACCTTCACTAAAGCTGAAAGATGTTTCGTTTCTGCGCTTCAAGAAGCTAAAGAAGGTTTTGGGGAGAGGGATCCTCATGTTGCATCTGCCTTCAACAATCTGGCAGAATTGTATAGAGTCATGAAAAGATATGACAAAGCAGAACCAATGTATTTGGAAGCCATCAACATATTGGAGGAATCCTATGGCTCTGAAGATATAAGG

Coding sequence (CDS)

CTCTGTGGTGCAGCTATAATACTTGGAATAAACTCAAATCCTGTCTTTGCTAAGGACACAACATTTAAGCCAAGTTCTGAAAATGGTATTGAAGAGAATGACACTATTGGACTACGCAAAGTGGAGGATGGTTCTGTCATATCAAATATACATACTTCAAAGTGGAGAGTTTTTACAGATACTGCTCGGGACTTGTTTCTGCAGGCAAGCATTATTTCTTTTACCTTCACTAAAGCTGAAAGATGTTTCGTTTCTGCGCTTCAAGAAGCTAAAGAAGGTTTTGGGGAGAGGGATCCTCATGTTGCATCTGCCTTCAACAATCTGGCAGAATTGTATAGAGTCATGAAAAGATATGACAAAGCAGAACCAATGTATTTGGAAGCCATCAACATATTGGAGGAATCCTATGGCTCTGAAGATATAAGG

Protein sequence

LCGAAIILGINSNPVFAKDTTFKPSSENGIEENDTIGLRKVEDGSVISNIHTSKWRVFTDTARDLFLQASIISFTFTKAERCFVSALQEAKEGFGERDPHVASAFNNLAELYRVMKRYDKAEPMYLEAINILEESYGSEDIR

Homology

[Close]

BLAST of MS019098 vs. NCBI nr
Match: XP_022143433.1 (uncharacterized protein LOC111013309 isoform X2 [Momordica charantia])

HSP 1 Score: 252.7 bits (644), Expect = 1.9e-63
Identity = 129/139 (92.81%), Postives = 131/139 (94.24%), Query Frame = 0


Query: 4   AAIILGINSNPVFAKDTTFKPSSENGIEENDTIGLRKVEDGSVISNIHTSKWRVFTDTAR 63
           AAIILGINSNPVFAKDTTFKPSSENGIEENDTIGLRKVEDGSVISNIHTSKWRVFTDTAR
Sbjct: 71  AAIILGINSNPVFAKDTTFKPSSENGIEENDTIGLRKVEDGSVISNIHTSKWRVFTDTAR 130

Query: 64  DLFLQASIISFTFTKAERCFVSALQEAKEGFGERDPHVASAFNNLAELYRVMKRYDKAEP 123
           DLFLQ  +      +AERCFVSALQEAKEGFGERDPHVASAFNNLAELYRVMKRYDKAEP
Sbjct: 131 DLFLQGRL-----EEAERCFVSALQEAKEGFGERDPHVASAFNNLAELYRVMKRYDKAEP 190

Query: 124 MYLEAINILEESYGSEDIR 143
           MYLEAINILEESYGSEDIR
Sbjct: 191 MYLEAINILEESYGSEDIR 204

[Close]

BLAST of MS019098 vs. NCBI nr
Match: XP_022143432.1 (kinesin light chain 1 isoform X1 [Momordica charantia])

HSP 1 Score: 252.7 bits (644), Expect = 1.9e-63
Identity = 129/139 (92.81%), Postives = 131/139 (94.24%), Query Frame = 0


Query: 4   AAIILGINSNPVFAKDTTFKPSSENGIEENDTIGLRKVEDGSVISNIHTSKWRVFTDTAR 63
           AAIILGINSNPVFAKDTTFKPSSENGIEENDTIGLRKVEDGSVISNIHTSKWRVFTDTAR
Sbjct: 71  AAIILGINSNPVFAKDTTFKPSSENGIEENDTIGLRKVEDGSVISNIHTSKWRVFTDTAR 130

Query: 64  DLFLQASIISFTFTKAERCFVSALQEAKEGFGERDPHVASAFNNLAELYRVMKRYDKAEP 123
           DLFLQ  +      +AERCFVSALQEAKEGFGERDPHVASAFNNLAELYRVMKRYDKAEP
Sbjct: 131 DLFLQGRL-----EEAERCFVSALQEAKEGFGERDPHVASAFNNLAELYRVMKRYDKAEP 190

Query: 124 MYLEAINILEESYGSEDIR 143
           MYLEAINILEESYGSEDIR
Sbjct: 191 MYLEAINILEESYGSEDIR 204

[Close]

BLAST of MS019098 vs. NCBI nr
Match: XP_022143434.1 (kinesin light chain 1 isoform X3 [Momordica charantia])

HSP 1 Score: 249.6 bits (636), Expect = 1.6e-62
Identity = 127/137 (92.70%), Postives = 129/137 (94.16%), Query Frame = 0


Query: 6   IILGINSNPVFAKDTTFKPSSENGIEENDTIGLRKVEDGSVISNIHTSKWRVFTDTARDL 65
           IILGINSNPVFAKDTTFKPSSENGIEENDTIGLRKVEDGSVISNIHTSKWRVFTDTARDL
Sbjct: 5   IILGINSNPVFAKDTTFKPSSENGIEENDTIGLRKVEDGSVISNIHTSKWRVFTDTARDL 64

Query: 66  FLQASIISFTFTKAERCFVSALQEAKEGFGERDPHVASAFNNLAELYRVMKRYDKAEPMY 125
           FLQ  +      +AERCFVSALQEAKEGFGERDPHVASAFNNLAELYRVMKRYDKAEPMY
Sbjct: 65  FLQGRL-----EEAERCFVSALQEAKEGFGERDPHVASAFNNLAELYRVMKRYDKAEPMY 124

Query: 126 LEAINILEESYGSEDIR 143
           LEAINILEESYGSEDIR
Sbjct: 125 LEAINILEESYGSEDIR 136

[Close]

BLAST of MS019098 vs. NCBI nr
Match: XP_022997758.1 (uncharacterized protein LOC111492620 [Cucurbita maxima])

HSP 1 Score: 227.6 bits (579), Expect = 6.6e-56
Identity = 117/139 (84.17%), Postives = 123/139 (88.49%), Query Frame = 0


Query: 4   AAIILGINSNPVFAKDTTFKPSSENGIEENDTIGLRKVEDGSVISNIHTSKWRVFTDTAR 63
           AAIILGINSNPV AKD   KPSSENGIEE+DTIGLRKVEDGSVISN+HTSKWRVFTD AR
Sbjct: 71  AAIILGINSNPVLAKDAPSKPSSENGIEESDTIGLRKVEDGSVISNLHTSKWRVFTDNAR 130

Query: 64  DLFLQASIISFTFTKAERCFVSALQEAKEGFGERDPHVASAFNNLAELYRVMKRYDKAEP 123
           DLFLQ  +      +AER FVSA+QEAKEGFGERDPHVASAFNNLAELYRV K +DKAEP
Sbjct: 131 DLFLQGKL-----EEAERYFVSAIQEAKEGFGERDPHVASAFNNLAELYRVTKTFDKAEP 190

Query: 124 MYLEAINILEESYGSEDIR 143
           MYLEAINILEESYGSEDIR
Sbjct: 191 MYLEAINILEESYGSEDIR 204

[Close]

BLAST of MS019098 vs. NCBI nr
Match: KAG6606987.1 (Nephrocystin-3, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 227.6 bits (579), Expect = 6.6e-56
Identity = 117/139 (84.17%), Postives = 123/139 (88.49%), Query Frame = 0


Query: 4   AAIILGINSNPVFAKDTTFKPSSENGIEENDTIGLRKVEDGSVISNIHTSKWRVFTDTAR 63
           AAIILGINSNPV AKD   KPSSENGIEE+DTIGLRKVEDGSVISN+HTSKWRVFTD AR
Sbjct: 71  AAIILGINSNPVLAKDAPSKPSSENGIEESDTIGLRKVEDGSVISNLHTSKWRVFTDNAR 130

Query: 64  DLFLQASIISFTFTKAERCFVSALQEAKEGFGERDPHVASAFNNLAELYRVMKRYDKAEP 123
           DLFLQ  +      +AER FVSA+QEAKEGFGERDPHVASAFNNLAELYRV K +DKAEP
Sbjct: 131 DLFLQGKL-----EEAERFFVSAIQEAKEGFGERDPHVASAFNNLAELYRVTKTFDKAEP 190

Query: 124 MYLEAINILEESYGSEDIR 143
           MYLEAINILEESYGSEDIR
Sbjct: 191 MYLEAINILEESYGSEDIR 204

[Close]

BLAST of MS019098 vs. ExPASy Swiss-Prot
Match: Q92624 (Amyloid protein-binding protein 2 OS=Homo sapiens OX=9606 GN=APPBP2 PE=1 SV=2)

HSP 1 Score: 52.0 bits (123), Expect = 6.5e-06
Identity = 25/63 (39.68%), Postives = 40/63 (63.49%), Query Frame = 0


Query: 78  KAERCFVSALQEAKEGFGERDPHVASAFNNLAELYRVMKRYDKAEPMYLEAINILEESYG 137
           +A    +S+LQ AK+ FGE +   A  + NL  LY+ M+++ +AE M+++AI I E+  G
Sbjct: 405 EAHDLHLSSLQLAKKAFGEFNVQTAKHYGNLGRLYQSMRKFKEAEEMHIKAIQIKEQLLG 464

Query: 138 SED 141
            ED
Sbjct: 465 QED 467

[Close]

BLAST of MS019098 vs. ExPASy Swiss-Prot
Match: Q9DAX9 (Amyloid protein-binding protein 2 OS=Mus musculus OX=10090 GN=Appbp2 PE=2 SV=1)

HSP 1 Score: 52.0 bits (123), Expect = 6.5e-06
Identity = 25/63 (39.68%), Postives = 40/63 (63.49%), Query Frame = 0


Query: 78  KAERCFVSALQEAKEGFGERDPHVASAFNNLAELYRVMKRYDKAEPMYLEAINILEESYG 137
           +A    +S+LQ AK+ FGE +   A  + NL  LY+ M+++ +AE M+++AI I E+  G
Sbjct: 405 EAHDLHLSSLQLAKKAFGEFNVQTAKHYGNLGRLYQSMRKFKEAEEMHIKAIQIKEQLLG 464

Query: 138 SED 141
            ED
Sbjct: 465 QED 467

[Close]

BLAST of MS019098 vs. ExPASy Swiss-Prot
Match: A5HK05 (Amyloid protein-binding protein 2 OS=Rattus norvegicus OX=10116 GN=Appbp2 PE=2 SV=1)

HSP 1 Score: 52.0 bits (123), Expect = 6.5e-06
Identity = 25/63 (39.68%), Postives = 40/63 (63.49%), Query Frame = 0


Query: 78  KAERCFVSALQEAKEGFGERDPHVASAFNNLAELYRVMKRYDKAEPMYLEAINILEESYG 137
           +A    +S+LQ AK+ FGE +   A  + NL  LY+ M+++ +AE M+++AI I E+  G
Sbjct: 405 EAHDLHLSSLQLAKKAFGEFNVQTAKHYGNLGRLYQSMRKFKEAEEMHIKAIQIKEQLLG 464

Query: 138 SED 141
            ED
Sbjct: 465 QED 467

[Close]

BLAST of MS019098 vs. ExPASy Swiss-Prot
Match: Q7Z494 (Nephrocystin-3 OS=Homo sapiens OX=9606 GN=NPHP3 PE=1 SV=1)

HSP 1 Score: 46.2 bits (108), Expect = 3.6e-04
Identity = 24/60 (40.00%), Postives = 37/60 (61.67%), Query Frame = 0


Query: 78   KAERCFVSALQEAKEGFGERDPHVASAFNNLAELYRVMKRYDKAEPMYLEAINILEESYG 137
            KA   +  A++  ++ FG + P VA+A  NLA LY  MK++ +A P+Y  A+ I E+S G
Sbjct: 1195 KAVPLYELAVEIRQKSFGPKHPSVATALVNLAVLYSQMKKHVEALPLYERALKIYEDSLG 1254

[Close]

BLAST of MS019098 vs. ExPASy Swiss-Prot
Match: Q6AZT7 (Nephrocystin-3 OS=Xenopus laevis OX=8355 GN=nphp3 PE=2 SV=1)

HSP 1 Score: 45.8 bits (107), Expect = 4.6e-04
Identity = 25/60 (41.67%), Postives = 35/60 (58.33%), Query Frame = 0


Query: 78   KAERCFVSALQEAKEGFGERDPHVASAFNNLAELYRVMKRYDKAEPMYLEAINILEESYG 137
            KA   +  A+   ++ FG + P VA+A  NLA LY  MK+ D A P+Y  A+ I E+S G
Sbjct: 1168 KAVPLYELAVDIRQKSFGPKHPSVATALVNLAVLYCQMKKQDDALPLYERAMKIYEDSLG 1227

[Close]

BLAST of MS019098 vs. ExPASy TrEMBL
Match: A0A6J1CQP6 (uncharacterized protein LOC111013309 isoform X2 OS=Momordica charantia OX=3673 GN=LOC111013309 PE=4 SV=1)

HSP 1 Score: 252.7 bits (644), Expect = 9.2e-64
Identity = 129/139 (92.81%), Postives = 131/139 (94.24%), Query Frame = 0


Query: 4   AAIILGINSNPVFAKDTTFKPSSENGIEENDTIGLRKVEDGSVISNIHTSKWRVFTDTAR 63
           AAIILGINSNPVFAKDTTFKPSSENGIEENDTIGLRKVEDGSVISNIHTSKWRVFTDTAR
Sbjct: 71  AAIILGINSNPVFAKDTTFKPSSENGIEENDTIGLRKVEDGSVISNIHTSKWRVFTDTAR 130

Query: 64  DLFLQASIISFTFTKAERCFVSALQEAKEGFGERDPHVASAFNNLAELYRVMKRYDKAEP 123
           DLFLQ  +      +AERCFVSALQEAKEGFGERDPHVASAFNNLAELYRVMKRYDKAEP
Sbjct: 131 DLFLQGRL-----EEAERCFVSALQEAKEGFGERDPHVASAFNNLAELYRVMKRYDKAEP 190

Query: 124 MYLEAINILEESYGSEDIR 143
           MYLEAINILEESYGSEDIR
Sbjct: 191 MYLEAINILEESYGSEDIR 204

[Close]

BLAST of MS019098 vs. ExPASy TrEMBL
Match: A0A6J1CQT4 (kinesin light chain 1 isoform X1 OS=Momordica charantia OX=3673 GN=LOC111013309 PE=4 SV=1)

HSP 1 Score: 252.7 bits (644), Expect = 9.2e-64
Identity = 129/139 (92.81%), Postives = 131/139 (94.24%), Query Frame = 0


Query: 4   AAIILGINSNPVFAKDTTFKPSSENGIEENDTIGLRKVEDGSVISNIHTSKWRVFTDTAR 63
           AAIILGINSNPVFAKDTTFKPSSENGIEENDTIGLRKVEDGSVISNIHTSKWRVFTDTAR
Sbjct: 71  AAIILGINSNPVFAKDTTFKPSSENGIEENDTIGLRKVEDGSVISNIHTSKWRVFTDTAR 130

Query: 64  DLFLQASIISFTFTKAERCFVSALQEAKEGFGERDPHVASAFNNLAELYRVMKRYDKAEP 123
           DLFLQ  +      +AERCFVSALQEAKEGFGERDPHVASAFNNLAELYRVMKRYDKAEP
Sbjct: 131 DLFLQGRL-----EEAERCFVSALQEAKEGFGERDPHVASAFNNLAELYRVMKRYDKAEP 190

Query: 124 MYLEAINILEESYGSEDIR 143
           MYLEAINILEESYGSEDIR
Sbjct: 191 MYLEAINILEESYGSEDIR 204

[Close]

BLAST of MS019098 vs. ExPASy TrEMBL
Match: A0A6J1CPA5 (kinesin light chain 1 isoform X3 OS=Momordica charantia OX=3673 GN=LOC111013309 PE=4 SV=1)

HSP 1 Score: 249.6 bits (636), Expect = 7.8e-63
Identity = 127/137 (92.70%), Postives = 129/137 (94.16%), Query Frame = 0


Query: 6   IILGINSNPVFAKDTTFKPSSENGIEENDTIGLRKVEDGSVISNIHTSKWRVFTDTARDL 65
           IILGINSNPVFAKDTTFKPSSENGIEENDTIGLRKVEDGSVISNIHTSKWRVFTDTARDL
Sbjct: 5   IILGINSNPVFAKDTTFKPSSENGIEENDTIGLRKVEDGSVISNIHTSKWRVFTDTARDL 64

Query: 66  FLQASIISFTFTKAERCFVSALQEAKEGFGERDPHVASAFNNLAELYRVMKRYDKAEPMY 125
           FLQ  +      +AERCFVSALQEAKEGFGERDPHVASAFNNLAELYRVMKRYDKAEPMY
Sbjct: 65  FLQGRL-----EEAERCFVSALQEAKEGFGERDPHVASAFNNLAELYRVMKRYDKAEPMY 124

Query: 126 LEAINILEESYGSEDIR 143
           LEAINILEESYGSEDIR
Sbjct: 125 LEAINILEESYGSEDIR 136

[Close]

BLAST of MS019098 vs. ExPASy TrEMBL
Match: A0A6J1KEU5 (uncharacterized protein LOC111492620 OS=Cucurbita maxima OX=3661 GN=LOC111492620 PE=4 SV=1)

HSP 1 Score: 227.6 bits (579), Expect = 3.2e-56
Identity = 117/139 (84.17%), Postives = 123/139 (88.49%), Query Frame = 0


Query: 4   AAIILGINSNPVFAKDTTFKPSSENGIEENDTIGLRKVEDGSVISNIHTSKWRVFTDTAR 63
           AAIILGINSNPV AKD   KPSSENGIEE+DTIGLRKVEDGSVISN+HTSKWRVFTD AR
Sbjct: 71  AAIILGINSNPVLAKDAPSKPSSENGIEESDTIGLRKVEDGSVISNLHTSKWRVFTDNAR 130

Query: 64  DLFLQASIISFTFTKAERCFVSALQEAKEGFGERDPHVASAFNNLAELYRVMKRYDKAEP 123
           DLFLQ  +      +AER FVSA+QEAKEGFGERDPHVASAFNNLAELYRV K +DKAEP
Sbjct: 131 DLFLQGKL-----EEAERYFVSAIQEAKEGFGERDPHVASAFNNLAELYRVTKTFDKAEP 190

Query: 124 MYLEAINILEESYGSEDIR 143
           MYLEAINILEESYGSEDIR
Sbjct: 191 MYLEAINILEESYGSEDIR 204

[Close]

BLAST of MS019098 vs. ExPASy TrEMBL
Match: A0A6J1G9U8 (uncharacterized protein LOC111452120 OS=Cucurbita moschata OX=3662 GN=LOC111452120 PE=4 SV=1)

HSP 1 Score: 227.6 bits (579), Expect = 3.2e-56
Identity = 117/139 (84.17%), Postives = 123/139 (88.49%), Query Frame = 0


Query: 4   AAIILGINSNPVFAKDTTFKPSSENGIEENDTIGLRKVEDGSVISNIHTSKWRVFTDTAR 63
           AAIILGINSNPV AKD   KPSSENGIEE+DTIGLRKVEDGSVISN+HTSKWRVFTD AR
Sbjct: 71  AAIILGINSNPVLAKDAPSKPSSENGIEESDTIGLRKVEDGSVISNLHTSKWRVFTDNAR 130

Query: 64  DLFLQASIISFTFTKAERCFVSALQEAKEGFGERDPHVASAFNNLAELYRVMKRYDKAEP 123
           DLFLQ  +      +AER FVSA+QEAKEGFGERDPHVASAFNNLAELYRV K +DKAEP
Sbjct: 131 DLFLQGKL-----EEAERFFVSAIQEAKEGFGERDPHVASAFNNLAELYRVTKTFDKAEP 190

Query: 124 MYLEAINILEESYGSEDIR 143
           MYLEAINILEESYGSEDIR
Sbjct: 191 MYLEAINILEESYGSEDIR 204

[Close]

BLAST of MS019098 vs. TAIR 10
Match: AT5G37590.1 (Tetratricopeptide repeat (TPR)-like superfamily protein )

HSP 1 Score: 174.1 bits (440), Expect = 8.0e-44
Identity = 87/142 (61.27%), Postives = 105/142 (73.94%), Query Frame = 0


Query: 1   LCGAAIILGINSNPVFAKDTTFKPSSENGIEENDTIGLRKVEDGSVISNIHTSKWRVFTD 60
           L G A ILG   N V A+D + K  S + ++E+   GL K+EDGSV+SNIHTSKWRVFTD
Sbjct: 66  LSGQAAILGFCGNTVLAEDESMKSKSGDNMDESGNTGLEKIEDGSVVSNIHTSKWRVFTD 125

Query: 61  TARDLFLQASIISFTFTKAERCFVSALQEAKEGFGERDPHVASAFNNLAELYRVMKRYDK 120
           + RD F Q  +       AER F SA+QEAKEGFGE+DPHVASA NNLAELYRV K +DK
Sbjct: 126 SGRDYFFQGKL-----EPAERLFGSAIQEAKEGFGEKDPHVASACNNLAELYRVKKEFDK 185

Query: 121 AEPMYLEAINILEESYGSEDIR 143
           AEP+YLEA++ILEE YG +D+R
Sbjct: 186 AEPLYLEAVSILEEFYGPDDVR 202

The following BLAST results are available for this feature:

BLAST of MS019098 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022143433.1	1.9e-63	92.81	uncharacterized protein LOC111013309 isoform X2 [Momordica charantia]	[more]
XP_022143432.1	1.9e-63	92.81	kinesin light chain 1 isoform X1 [Momordica charantia]	[more]
XP_022143434.1	1.6e-62	92.70	kinesin light chain 1 isoform X3 [Momordica charantia]	[more]
XP_022997758.1	6.6e-56	84.17	uncharacterized protein LOC111492620 [Cucurbita maxima]	[more]
KAG6606987.1	6.6e-56	84.17	Nephrocystin-3, partial [Cucurbita argyrosperma subsp. sororia]	[more]

BLAST of MS019098 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q92624	6.5e-06	39.68	Amyloid protein-binding protein 2 OS=Homo sapiens OX=9606 GN=APPBP2 PE=1 SV=2	[more]
Q9DAX9	6.5e-06	39.68	Amyloid protein-binding protein 2 OS=Mus musculus OX=10090 GN=Appbp2 PE=2 SV=1	[more]
A5HK05	6.5e-06	39.68	Amyloid protein-binding protein 2 OS=Rattus norvegicus OX=10116 GN=Appbp2 PE=2 S...	[more]
Q7Z494	3.6e-04	40.00	Nephrocystin-3 OS=Homo sapiens OX=9606 GN=NPHP3 PE=1 SV=1	[more]
Q6AZT7	4.6e-04	41.67	Nephrocystin-3 OS=Xenopus laevis OX=8355 GN=nphp3 PE=2 SV=1	[more]

BLAST of MS019098 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1CQP6	9.2e-64	92.81	uncharacterized protein LOC111013309 isoform X2 OS=Momordica charantia OX=3673 G...	[more]
A0A6J1CQT4	9.2e-64	92.81	kinesin light chain 1 isoform X1 OS=Momordica charantia OX=3673 GN=LOC111013309 ...	[more]
A0A6J1CPA5	7.8e-63	92.70	kinesin light chain 1 isoform X3 OS=Momordica charantia OX=3673 GN=LOC111013309 ...	[more]
A0A6J1KEU5	3.2e-56	84.17	uncharacterized protein LOC111492620 OS=Cucurbita maxima OX=3661 GN=LOC111492620...	[more]
A0A6J1G9U8	3.2e-56	84.17	uncharacterized protein LOC111452120 OS=Cucurbita moschata OX=3662 GN=LOC1114521...	[more]

BLAST of MS019098 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G37590.1	8.0e-44	61.27	Tetratricopeptide repeat (TPR)-like superfamily protein	[more]

InterPro

Analysis Name: InterPro Annotations of Bitter gourd (TR) v1
Date Performed: 2021-10-25

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR019734	Tetratricopeptide repeat	SMART	SM00028	tpr_5	coord: 102..135 e-value: 1.6E-4 score: 31.0
IPR019734	Tetratricopeptide repeat	PROSITE	PS50005	TPR	coord: 102..135 score: 9.0274
IPR011990	Tetratricopeptide-like helical domain superfamily	GENE3D	1.25.40.10	Tetratricopeptide repeat domain	coord: 61..142 e-value: 1.8E-14 score: 55.5
IPR011990	Tetratricopeptide-like helical domain superfamily	SUPERFAMILY	48452	TPR-like	coord: 76..136
None	No IPR available	PFAM	PF13424	TPR_12	coord: 76..134 e-value: 2.1E-9 score: 37.5
None	No IPR available	PANTHER	PTHR47689	TETRATRICOPEPTIDE REPEAT (TPR)-LIKE SUPERFAMILY PROTEIN	coord: 4..142
None	No IPR available	PANTHER	PTHR47689:SF2	TETRATRICOPEPTIDE REPEAT (TPR)-LIKE SUPERFAMILY PROTEIN	coord: 4..142

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
MS019098.1	MS019098.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
molecular_function	GO:0005515	protein binding