MS019089 (gene) Bitter gourd (TR) v1

Overview


Name	MS019089
Type	gene
Organism	Momordica charantia cv. TR (Bitter gourd (TR) v1)
Description	AMPK1_CBM domain-containing protein
Location	scaffold20: 1362255 .. 1363081 (-)
RNA-Seq Expression	MS019089
Synteny	MS019089

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

CTATACAATAGATTGAAGAACAACAACAGAGAGGATGGCCTGCAAATTAGTAGAAATGAGAAGGCCAAGAGATTATTGATCACAATAAGTGTTGTAGGAAGCACAGGGCCATTGAGATTTATAGCGAACGAAGACGATCTCGTGTGTGAAGTCATCCACGCCGCTCTCAAATCTTATGCTCGCCAAGCCCGACTTCCTCTTCTTGGCTTCGATGCTACCAACTTTCTTCTATACTGCAATAACGTCGAGGAGGCGGATGGCTGTACGTTTCTCTTATCTCTCTTCTCCTATCATTTCTCAAAAAAAATTCTTCGAATTTATCTAAGTTTATGAATGGTTCAAAGCTTGTTAAGTTTTCATCTATAATCCCTTCAAATCTCCTATTTTATTTATTTGATTTTTGAATTATTGTGTTGCCAACTTTGAGTATAGTCCAACAGAAAATAAGAATTTCTAATTCTAAAACAATAAAATATAAAAACTTCTAAAAATTTGAAAATGTATATATATAAATATCTTTTTTAGTACAACATGTGGGGTGGTGATCGAGAACTCACAACCTAATATATGCCAATTACGATTGAGCTATACTCGCTTTGGCAAAAAATATATATAAACATAACGATAAATTTTCATTGATTTGTGCAGGTTTGAACCCAATGGAACGAATTGGATCAAAGCAAGCAAGAAACTTTGTGTTGTGCAAAAAGCAAGGCACACCATTGCCATTGCATGATCAAAAGATGAAAAAGCTTATGGCAATAAAGGAAAGCCATGGATGGAAGGCTTGGATTAACAAGTCTTTAAGTTTTAAGATACCATCACAT

mRNA sequence

CTATACAATAGATTGAAGAACAACAACAGAGAGGATGGCCTGCAAATTAGTAGAAATGAGAAGGCCAAGAGATTATTGATCACAATAAGTGTTGTAGGAAGCACAGGGCCATTGAGATTTATAGCGAACGAAGACGATCTCGTGTGTGAAGTCATCCACGCCGCTCTCAAATCTTATGCTCGCCAAGCCCGACTTCCTCTTCTTGGCTTCGATGCTACCAACTTTCTTCTATACTGCAATAACGTCGAGGAGGCGGATGGCTGTTTGAACCCAATGGAACGAATTGGATCAAAGCAAGCAAGAAACTTTGTGTTGTGCAAAAAGCAAGGCACACCATTGCCATTGCATGATCAAAAGATGAAAAAGCTTATGGCAATAAAGGAAAGCCATGGATGGAAGGCTTGGATTAACAAGTCTTTAAGTTTTAAGATACCATCACAT

Coding sequence (CDS)

CTATACAATAGATTGAAGAACAACAACAGAGAGGATGGCCTGCAAATTAGTAGAAATGAGAAGGCCAAGAGATTATTGATCACAATAAGTGTTGTAGGAAGCACAGGGCCATTGAGATTTATAGCGAACGAAGACGATCTCGTGTGTGAAGTCATCCACGCCGCTCTCAAATCTTATGCTCGCCAAGCCCGACTTCCTCTTCTTGGCTTCGATGCTACCAACTTTCTTCTATACTGCAATAACGTCGAGGAGGCGGATGGCTGTTTGAACCCAATGGAACGAATTGGATCAAAGCAAGCAAGAAACTTTGTGTTGTGCAAAAAGCAAGGCACACCATTGCCATTGCATGATCAAAAGATGAAAAAGCTTATGGCAATAAAGGAAAGCCATGGATGGAAGGCTTGGATTAACAAGTCTTTAAGTTTTAAGATACCATCACAT

Protein sequence

LYNRLKNNNREDGLQISRNEKAKRLLITISVVGSTGPLRFIANEDDLVCEVIHAALKSYARQARLPLLGFDATNFLLYCNNVEEADGCLNPMERIGSKQARNFVLCKKQGTPLPLHDQKMKKLMAIKESHGWKAWINKSLSFKIPSH

Homology

[Close]

BLAST of MS019089 vs. NCBI nr
Match: XP_022143447.1 (uncharacterized protein LOC111013321 [Momordica charantia])

HSP 1 Score: 298.1 bits (762), Expect = 4.1e-77
Identity = 144/147 (97.96%), Postives = 146/147 (99.32%), Query Frame = 0


Query: 1   LYNRLKNNNREDGLQISRNEKAKRLLITISVVGSTGPLRFIANEDDLVCEVIHAALKSYA 60
           LYNRLKNNNREDGLQISRNEKAKRLLITISVVGSTGPLRFIANEDDLVCEVIHAALKSYA
Sbjct: 5   LYNRLKNNNREDGLQISRNEKAKRLLITISVVGSTGPLRFIANEDDLVCEVIHAALKSYA 64

Query: 61  RQARLPLLGFDATNFLLYCNNVEEADGCLNPMERIGSKQARNFVLCKKQGTPLPLHDQKM 120
           RQARLPLLGFDATNFLLYCNNVE+ADGCLNPME+IG KQARNFVLCKKQGTPLPLHDQKM
Sbjct: 65  RQARLPLLGFDATNFLLYCNNVEKADGCLNPMEQIGPKQARNFVLCKKQGTPLPLHDQKM 124

Query: 121 KKLMAIKESHGWKAWINKSLSFKIPSH 148
           KKLMAIKESHGWKAWINKSLSFKIPSH
Sbjct: 125 KKLMAIKESHGWKAWINKSLSFKIPSH 151

[Close]

BLAST of MS019089 vs. NCBI nr
Match: XP_022983917.1 (uncharacterized protein LOC111482395 [Cucurbita maxima])

HSP 1 Score: 199.9 bits (507), Expect = 1.5e-47
Identity = 102/144 (70.83%), Postives = 114/144 (79.17%), Query Frame = 0


Query: 5   LKNNNREDGLQISRNEKAKRLLITISVVGSTGPLRFIANEDDLVCEVIHAALKSYARQAR 64
           LKN  R +G         KRLLI+++VVGS+GPLRF+A E+DLVCEVIHAALKSYARQAR
Sbjct: 6   LKNKERVEG--------GKRLLISVNVVGSSGPLRFVAKEEDLVCEVIHAALKSYARQAR 65

Query: 65  LPLLGFDATNFLLYCNNVEEADGCLNPMERIGSKQARNFVLCKKQGTPLPL-HDQKMKKL 124
           LPLLG  A+NFLLY ++ E+    LNP E IGSKQARNFVLCKK  TP PL  DQKMKKL
Sbjct: 66  LPLLGTHASNFLLYSSDSEDPYASLNPRETIGSKQARNFVLCKKAATPSPLPADQKMKKL 125

Query: 125 MAIKESHGWKAWINKSLSFKIPSH 148
           M +KESHGWKAWIN SLSFKIPSH
Sbjct: 126 MTLKESHGWKAWINNSLSFKIPSH 141

[Close]

BLAST of MS019089 vs. NCBI nr
Match: KAG6581236.1 (hypothetical protein SDJN03_21238, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 189.5 bits (480), Expect = 2.1e-44
Identity = 95/126 (75.40%), Postives = 105/126 (83.33%), Query Frame = 0


Query: 18  RNEKAKRLLITISVVGSTGPLRFIANEDDLVCEVIHAALKSYARQARLPLLGFDATNFLL 77
           R E  KRLLI+++VVGS+GPLRF+A E+DLVCEVIHAALKSYARQARLPLLG  A+NFLL
Sbjct: 11  RVEGGKRLLISVNVVGSSGPLRFVAKEEDLVCEVIHAALKSYARQARLPLLGTHASNFLL 70

Query: 78  YCNNVEEADGCLNPMERIGSKQARNFVLCKKQGTPLPL-HDQKMKKLMAIKESHGWKAWI 137
           Y +N E+    LNPME IGSKQARNFVLCKK  T  PL  DQ MKKLM +KESHGWKAWI
Sbjct: 71  YSSNSEDPYASLNPMETIGSKQARNFVLCKKVATASPLPADQNMKKLMTLKESHGWKAWI 130

Query: 138 NKSLSF 143
           NKSLSF
Sbjct: 131 NKSLSF 136

[Close]

BLAST of MS019089 vs. NCBI nr
Match: XP_022934727.1 (uncharacterized protein LOC111441823 [Cucurbita moschata])

HSP 1 Score: 189.5 bits (480), Expect = 2.1e-44
Identity = 95/126 (75.40%), Postives = 105/126 (83.33%), Query Frame = 0


Query: 18  RNEKAKRLLITISVVGSTGPLRFIANEDDLVCEVIHAALKSYARQARLPLLGFDATNFLL 77
           R E  KRLLI+++VVGS+GPLRF+A E+DLVCEVIHAALKSYARQARLPLLG  A+NFLL
Sbjct: 11  RVEGGKRLLISVNVVGSSGPLRFVAKEEDLVCEVIHAALKSYARQARLPLLGTHASNFLL 70

Query: 78  YCNNVEEADGCLNPMERIGSKQARNFVLCKKQGTPLPL-HDQKMKKLMAIKESHGWKAWI 137
           Y +N E+    LNPME IGSKQARNFVLCKK  T  PL  DQ MKKLM +KESHGWKAWI
Sbjct: 71  YSSNSEDPYASLNPMETIGSKQARNFVLCKKVATASPLPADQNMKKLMTLKESHGWKAWI 130

Query: 138 NKSLSF 143
           NKSLSF
Sbjct: 131 NKSLSF 136

[Close]

BLAST of MS019089 vs. NCBI nr
Match: XP_023529063.1 (uncharacterized protein LOC111791812 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 180.6 bits (457), Expect = 9.5e-42
Identity = 91/125 (72.80%), Postives = 102/125 (81.60%), Query Frame = 0


Query: 18  RNEKAKRLLITISVVGSTGPLRFIANEDDLVCEVIHAALKSYARQARLPLLGFDATNFLL 77
           R E  KRLL++++VVGS+GPLRF+A E+DLV EVIHAALKSYARQARLP LG  A+NFLL
Sbjct: 11  RVEGGKRLLVSVNVVGSSGPLRFVAKEEDLVSEVIHAALKSYARQARLPHLGTHASNFLL 70

Query: 78  YCNNVEEADGCLNPMERIGSKQARNFVLCKKQGTPLPL-HDQKMKKLMAIKESHGWKAWI 137
           Y +N E+    LNPME IGSKQARNFVLCKK  T  PL  DQ MKKLM +KESHGWKAWI
Sbjct: 71  YSSNSEDPYASLNPMETIGSKQARNFVLCKKAATASPLPADQNMKKLMTLKESHGWKAWI 130

Query: 138 NKSLS 142
           NKSLS
Sbjct: 131 NKSLS 135

[Close]

BLAST of MS019089 vs. ExPASy TrEMBL
Match: A0A6J1CQV0 (uncharacterized protein LOC111013321 OS=Momordica charantia OX=3673 GN=LOC111013321 PE=4 SV=1)

HSP 1 Score: 298.1 bits (762), Expect = 2.0e-77
Identity = 144/147 (97.96%), Postives = 146/147 (99.32%), Query Frame = 0


Query: 1   LYNRLKNNNREDGLQISRNEKAKRLLITISVVGSTGPLRFIANEDDLVCEVIHAALKSYA 60
           LYNRLKNNNREDGLQISRNEKAKRLLITISVVGSTGPLRFIANEDDLVCEVIHAALKSYA
Sbjct: 5   LYNRLKNNNREDGLQISRNEKAKRLLITISVVGSTGPLRFIANEDDLVCEVIHAALKSYA 64

Query: 61  RQARLPLLGFDATNFLLYCNNVEEADGCLNPMERIGSKQARNFVLCKKQGTPLPLHDQKM 120
           RQARLPLLGFDATNFLLYCNNVE+ADGCLNPME+IG KQARNFVLCKKQGTPLPLHDQKM
Sbjct: 65  RQARLPLLGFDATNFLLYCNNVEKADGCLNPMEQIGPKQARNFVLCKKQGTPLPLHDQKM 124

Query: 121 KKLMAIKESHGWKAWINKSLSFKIPSH 148
           KKLMAIKESHGWKAWINKSLSFKIPSH
Sbjct: 125 KKLMAIKESHGWKAWINKSLSFKIPSH 151

[Close]

BLAST of MS019089 vs. ExPASy TrEMBL
Match: A0A6J1J0M6 (uncharacterized protein LOC111482395 OS=Cucurbita maxima OX=3661 GN=LOC111482395 PE=4 SV=1)

HSP 1 Score: 199.9 bits (507), Expect = 7.4e-48
Identity = 102/144 (70.83%), Postives = 114/144 (79.17%), Query Frame = 0


Query: 5   LKNNNREDGLQISRNEKAKRLLITISVVGSTGPLRFIANEDDLVCEVIHAALKSYARQAR 64
           LKN  R +G         KRLLI+++VVGS+GPLRF+A E+DLVCEVIHAALKSYARQAR
Sbjct: 6   LKNKERVEG--------GKRLLISVNVVGSSGPLRFVAKEEDLVCEVIHAALKSYARQAR 65

Query: 65  LPLLGFDATNFLLYCNNVEEADGCLNPMERIGSKQARNFVLCKKQGTPLPL-HDQKMKKL 124
           LPLLG  A+NFLLY ++ E+    LNP E IGSKQARNFVLCKK  TP PL  DQKMKKL
Sbjct: 66  LPLLGTHASNFLLYSSDSEDPYASLNPRETIGSKQARNFVLCKKAATPSPLPADQKMKKL 125

Query: 125 MAIKESHGWKAWINKSLSFKIPSH 148
           M +KESHGWKAWIN SLSFKIPSH
Sbjct: 126 MTLKESHGWKAWINNSLSFKIPSH 141

[Close]

BLAST of MS019089 vs. ExPASy TrEMBL
Match: A0A6J1F3L9 (uncharacterized protein LOC111441823 OS=Cucurbita moschata OX=3662 GN=LOC111441823 PE=4 SV=1)

HSP 1 Score: 189.5 bits (480), Expect = 9.9e-45
Identity = 95/126 (75.40%), Postives = 105/126 (83.33%), Query Frame = 0


Query: 18  RNEKAKRLLITISVVGSTGPLRFIANEDDLVCEVIHAALKSYARQARLPLLGFDATNFLL 77
           R E  KRLLI+++VVGS+GPLRF+A E+DLVCEVIHAALKSYARQARLPLLG  A+NFLL
Sbjct: 11  RVEGGKRLLISVNVVGSSGPLRFVAKEEDLVCEVIHAALKSYARQARLPLLGTHASNFLL 70

Query: 78  YCNNVEEADGCLNPMERIGSKQARNFVLCKKQGTPLPL-HDQKMKKLMAIKESHGWKAWI 137
           Y +N E+    LNPME IGSKQARNFVLCKK  T  PL  DQ MKKLM +KESHGWKAWI
Sbjct: 71  YSSNSEDPYASLNPMETIGSKQARNFVLCKKVATASPLPADQNMKKLMTLKESHGWKAWI 130

Query: 138 NKSLSF 143
           NKSLSF
Sbjct: 131 NKSLSF 136

[Close]

BLAST of MS019089 vs. ExPASy TrEMBL
Match: A0A0A0LBQ6 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G190360 PE=4 SV=1)

HSP 1 Score: 174.5 bits (441), Expect = 3.3e-40
Identity = 95/146 (65.07%), Postives = 107/146 (73.29%), Query Frame = 0


Query: 5   LKNNN---REDGLQISRNEKAKRLLITISVVGSTGPLRFIANEDDLVCEVIHAALKSYAR 64
           L NNN   R+D  +I      KR+LITI+V+GS+GPLRF+  E+DLVCEVIH ALKSYAR
Sbjct: 5   LSNNNKHRRDDAKEI------KRVLITINVMGSSGPLRFVVKEEDLVCEVIHIALKSYAR 64

Query: 65  QARLPLLGFDATNFLLYCNNVEEADGCLNPMERIGSKQARNFVLCKKQGTPLPLHDQKMK 124
           QARLPLLG D TNFLLY +N+      LNP E IGSKQARNFVLCKK+GT          
Sbjct: 65  QARLPLLGTDPTNFLLYSSNI-----ALNPNEAIGSKQARNFVLCKKEGT--------TP 124

Query: 125 KLMAIKESHGWKAWINKSLSFKIPSH 148
           K M IKESHGWKAWINKSL+FKI SH
Sbjct: 125 KRMTIKESHGWKAWINKSLNFKILSH 131

[Close]

BLAST of MS019089 vs. ExPASy TrEMBL
Match: A0A0A0L707 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G292550 PE=4 SV=1)

HSP 1 Score: 155.6 bits (392), Expect = 1.6e-34
Identity = 75/145 (51.72%), Postives = 105/145 (72.41%), Query Frame = 0


Query: 5   LKNNNREDGLQISRNEKAKRLLITISVVGSTGPLRFIANEDDLVCEVIHAALKSYARQAR 64
           LK +  + G +++ N K  R L++I+V+GSTGP+RF+ANEDDLVCE+I  +L  YARQAR
Sbjct: 5   LKRSTTKKGKKVNTNTKCNRFLVSINVIGSTGPIRFVANEDDLVCEIIKTSLTLYARQAR 64

Query: 65  LPLLGFDATNFLLYCNNVEEADGCLNPMERIGSKQARNFVLCKKQGTP--LPLHDQKMKK 124
           LP+LG +  NF+L+C N E+ D  L+P E IGSKQ R+F+LCKKQG+P  L L+++  ++
Sbjct: 65  LPILGTNVDNFILFCVNDEKRD-ALSPRESIGSKQVRHFLLCKKQGSPHSLLLNEKMSRQ 124

Query: 125 LMAIKESHGWKAWINKSLSFKIPSH 148
               K  + WK W+NKSLS+ I SH
Sbjct: 125 REEEKGRNHWKKWLNKSLSYSIQSH 148

[Close]

BLAST of MS019089 vs. TAIR 10
Match: AT1G23150.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G70780.1); Has 124 Blast hits to 124 proteins in 17 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 124; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 117.5 bits (293), Expect = 9.2e-27
Identity = 60/132 (45.45%), Postives = 81/132 (61.36%), Query Frame = 0


Query: 21  KAKRLLITISVVGSTGPLRFIANEDDLVCEVIHAALKSYARQARLPLLGFDATNFLLYCN 80
           K  R+LI+++ +GS GP+RF+ANE DLV  VI  ALK YAR+ RLP+LG D  +F+ YC 
Sbjct: 12  KGNRILISVTFLGSAGPIRFVANEGDLVASVIDTALKCYAREGRLPILGSDFNDFVFYCP 71

Query: 81  NVEEADGCLNPMERIGSKQARNFVLCKKQGTPLPLHDQKMKKLMAIKESH-----GWKAW 140
            V    G L+P E IGS   RNF+LCKK+     + + K +    I  +       +KAW
Sbjct: 72  MV--GPGALSPWEAIGSVGVRNFMLCKKKPEEKKVEEDKGRSNFPINGARKGAGGSFKAW 131

Query: 141 INKSLSFKIPSH 148
           INKSL  K+ +H
Sbjct: 132 INKSLRLKVTTH 141

[Close]

BLAST of MS019089 vs. TAIR 10
Match: AT1G70780.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: mitochondrion; EXPRESSED IN: sperm cell, male gametophyte, pollen tube; EXPRESSED DURING: L mature pollen stage, M germinated pollen stage; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G23150.1); Has 143 Blast hits to 143 proteins in 17 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 143; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 115.5 bits (288), Expect = 3.5e-26
Identity = 65/149 (43.62%), Postives = 88/149 (59.06%), Query Frame = 0


Query: 1   LYNRLKNNNREDGLQISRNEKAKRLLITISVVGSTGPLRFIANEDDLVCEVIHAALKSYA 60
           LYN+ K N         +N K  R+LI+++V+GS GP+RF+A EDDLV  VI  ALK YA
Sbjct: 3   LYNKQKKN---------QNAKGNRILISVTVLGSAGPIRFVAYEDDLVASVIDTALKGYA 62

Query: 61  RQARLPLLGFDATNFLLYCNNVEEADGCLNPMERIGSKQARNFVLCKK--QGTPLPLHDQ 120
           R+ RLPLLG D  +FLLYC  V      L+  + IGS  ARNF+LC+K  +      + +
Sbjct: 63  REGRLPLLGSDFNDFLLYCPMV--GPEALSTWDAIGSLGARNFMLCRKPEEKKVEESNGR 122

Query: 121 KMKKLMAIKESHGWKAWINKSLSFKIPSH 148
               +   ++    KAWINKS + K+ SH
Sbjct: 123 SDSTINGARKGGSLKAWINKSFNLKVSSH 140

[Close]

BLAST of MS019089 vs. TAIR 10
Match: AT5G37730.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G23150.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). )

HSP 1 Score: 112.8 bits (281), Expect = 2.3e-25
Identity = 56/130 (43.08%), Postives = 82/130 (63.08%), Query Frame = 0


Query: 9   NREDGLQISRNEKAKRLLITISVVGSTGPLRFIANEDDLVCEVIHAALKSYARQARLPLL 68
           NR + ++     K K+LL++++V+GS GP+RF+ANEDD V   I+  LK+YARQ R+P+L
Sbjct: 2   NRNENVKGVMKRKNKKLLVSVNVLGSVGPIRFLANEDDEVSSAINTTLKAYARQGRIPVL 61

Query: 69  GFDATNFLLYCNNVEEADGCLNPMERIGSKQARNFVLCKKQGTPLPLHDQKMKKLMAIKE 128
           GFD  NF+ Y  ++      L+P E+IGS    NF++CKK+  PL       +K+  I+E
Sbjct: 62  GFDVDNFIFY--SINAGFNTLHPQEKIGSMDVTNFLMCKKEPRPL-------EKVEGIRE 121

Query: 129 S-----HGWK 134
           S     HGWK
Sbjct: 122 SRARIGHGWK 122

[Close]

BLAST of MS019089 vs. TAIR 10
Match: AT2G27830.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT4G22758.1); Has 131 Blast hits to 131 proteins in 17 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 131; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 45.4 bits (106), Expect = 4.5e-05
Identity = 27/97 (27.84%), Postives = 53/97 (54.64%), Query Frame = 0


Query: 16  ISRNEKAKRLLITISVVGSTGPLRFIANEDDLVCEVIHAALKSYARQARLPLL-GFDATN 75
           +S   +  +LL+ ++V GS G ++ I + +  V ++I AA++ Y ++AR P L   + + 
Sbjct: 63  VSLPPRLTKLLLNVTVQGSLGAVQIIISPESTVSDLIDAAVRQYVKEARRPFLPESEPSR 122

Query: 76  FLLYCNNVEEADGCLNPMERIGSKQARNFVLCKKQGT 112
           F L+ +        +   E++ S  +RNF LC ++ T
Sbjct: 123 FDLHYSQFSLES--IVRDEKLISLGSRNFFLCGRKET 157

[Close]

BLAST of MS019089 vs. TAIR 10
Match: AT4G22758.1 (unknown protein; LOCATED IN: chloroplast; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT2G27830.1). )

HSP 1 Score: 43.5 bits (101), Expect = 1.7e-04
Identity = 28/94 (29.79%), Postives = 49/94 (52.13%), Query Frame = 0


Query: 15  QISRNEKAKRLLITISVVGSTGPLRFIANEDDLVCEVIHAALKSYARQARLPLLGFDATN 74
           Q    ++A +++I+++V GS GP+R +      V E I   +  Y ++ R P L  D+  
Sbjct: 114 QEGNTKEAPKVIISVAVEGSPGPVRAMVKLSCNVEETIKIVVDKYCKEGRTPKLDRDSA- 173

Query: 75  FLLYCNNVEEADGCLNPMERIGSKQARNFVLCKK 109
           F L+ ++   +  CL   E IG   +R+F + KK
Sbjct: 174 FELHQSHF--SIQCLEKREIIGELGSRSFYMRKK 204

The following BLAST results are available for this feature:

BLAST of MS019089 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022143447.1	4.1e-77	97.96	uncharacterized protein LOC111013321 [Momordica charantia]	[more]
XP_022983917.1	1.5e-47	70.83	uncharacterized protein LOC111482395 [Cucurbita maxima]	[more]
KAG6581236.1	2.1e-44	75.40	hypothetical protein SDJN03_21238, partial [Cucurbita argyrosperma subsp. sorori...	[more]
XP_022934727.1	2.1e-44	75.40	uncharacterized protein LOC111441823 [Cucurbita moschata]	[more]
XP_023529063.1	9.5e-42	72.80	uncharacterized protein LOC111791812 [Cucurbita pepo subsp. pepo]	[more]

BLAST of MS019089 vs. NCBI nr


Match Name	E-value	Identity	Description

BLAST of MS019089 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1CQV0	2.0e-77	97.96	uncharacterized protein LOC111013321 OS=Momordica charantia OX=3673 GN=LOC111013...	[more]
A0A6J1J0M6	7.4e-48	70.83	uncharacterized protein LOC111482395 OS=Cucurbita maxima OX=3661 GN=LOC111482395...	[more]
A0A6J1F3L9	9.9e-45	75.40	uncharacterized protein LOC111441823 OS=Cucurbita moschata OX=3662 GN=LOC1114418...	[more]
A0A0A0LBQ6	3.3e-40	65.07	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G190360 PE=4 SV=1	[more]
A0A0A0L707	1.6e-34	51.72	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G292550 PE=4 SV=1	[more]

BLAST of MS019089 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G23150.1	9.2e-27	45.45	unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TA...	[more]
AT1G70780.1	3.5e-26	43.62	unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic...	[more]
AT5G37730.1	2.3e-25	43.08	unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TA...	[more]
AT2G27830.1	4.5e-05	27.84	unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TA...	[more]
AT4G22758.1	1.7e-04	29.79	unknown protein; LOCATED IN: chloroplast; BEST Arabidopsis thaliana protein matc...	[more]

InterPro

Analysis Name: InterPro Annotations of Bitter gourd (TR) v1
Date Performed: 2021-10-25

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR040358	Uncharacterized protein At4g22758-like	PANTHER	PTHR33270	BNAC05G50380D PROTEIN	coord: 16..143
None	No IPR available	PANTHER	PTHR33270:SF5	GB\|AAC00605.1	coord: 16..143

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
MS019089.1	MS019089.1	mRNA