
MS019028 (gene) Bitter gourd (TR) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.AGGCGAGGATATGCGGCGGTGGCGGCGGATAGAGTTGTGGCAAAAAGTGGCAGCAAAACGAAGAAGGAAGAAGCAGAAAGAAGTACAGAAGAGAAGATGGCGTGGGTCCCTGATCCGGTGACCGGTTACTACCGGCCGGAGAACTGCGCCGACGAGATCGATCCCGTCGACCTCCGTGCTATGCTTCTGAAGCCGAGAAGAAAAATAGTCAAT AGGCGAGGATATGCGGCGGTGGCGGCGGATAGAGTTGTGGCAAAAAGTGGCAGCAAAACGAAGAAGGAAGAAGCAGAAAGAAGTACAGAAGAGAAGATGGCGTGGGTCCCTGATCCGGTGACCGGTTACTACCGGCCGGAGAACTGCGCCGACGAGATCGATCCCGTCGACCTCCGTGCTATGCTTCTGAAGCCGAGAAGAAAAATAGTCAAT AGGCGAGGATATGCGGCGGTGGCGGCGGATAGAGTTGTGGCAAAAAGTGGCAGCAAAACGAAGAAGGAAGAAGCAGAAAGAAGTACAGAAGAGAAGATGGCGTGGGTCCCTGATCCGGTGACCGGTTACTACCGGCCGGAGAACTGCGCCGACGAGATCGATCCCGTCGACCTCCGTGCTATGCTTCTGAAGCCGAGAAGAAAAATAGTCAAT RRGYAAVAADRVVAKSGSKTKKEEAERSTEEKMAWVPDPVTGYYRPENCADEIDPVDLRAMLLKPRRKIVN Homology
BLAST of MS019028 vs. NCBI nr
Match: XP_022155320.1 (late embryogenis abundant protein 2-like [Momordica charantia]) HSP 1 Score: 142.9 bits (359), Expect = 1.1e-30 Identity = 71/71 (100.00%), Postives = 71/71 (100.00%), Query Frame = 0
BLAST of MS019028 vs. NCBI nr
Match: XP_022155319.1 (protein SENESCENCE-ASSOCIATED GENE 21, mitochondrial-like [Momordica charantia]) HSP 1 Score: 95.5 bits (236), Expect = 1.9e-16 Identity = 45/67 (67.16%), Postives = 54/67 (80.60%), Query Frame = 0
BLAST of MS019028 vs. NCBI nr
Match: KAG6606955.1 (Protein SENESCENCE-ASSOCIATED GENE 21, mitochondrial, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 87.4 bits (215), Expect = 5.3e-14 Identity = 50/83 (60.24%), Postives = 54/83 (65.06%), Query Frame = 0
BLAST of MS019028 vs. NCBI nr
Match: XP_023528769.1 (protein SENESCENCE-ASSOCIATED GENE 21, mitochondrial-like [Cucurbita pepo subsp. pepo]) HSP 1 Score: 87.4 bits (215), Expect = 5.3e-14 Identity = 46/73 (63.01%), Postives = 54/73 (73.97%), Query Frame = 0
BLAST of MS019028 vs. NCBI nr
Match: KAG7036659.1 (Protein SENESCENCE-ASSOCIATED GENE 21, mitochondrial, partial [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 87.0 bits (214), Expect = 6.9e-14 Identity = 45/67 (67.16%), Postives = 50/67 (74.63%), Query Frame = 0
BLAST of MS019028 vs. ExPASy Swiss-Prot
Match: Q9SRX6 (Late embryogenis abundant protein 2 OS=Arabidopsis thaliana OX=3702 GN=LEA2 PE=2 SV=1) HSP 1 Score: 64.7 bits (156), Expect = 4.8e-10 Identity = 31/67 (46.27%), Postives = 43/67 (64.18%), Query Frame = 0
BLAST of MS019028 vs. ExPASy Swiss-Prot
Match: Q93WF6 (Protein SENESCENCE-ASSOCIATED GENE 21, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=SAG21 PE=2 SV=1) HSP 1 Score: 62.0 bits (149), Expect = 3.1e-09 Identity = 36/74 (48.65%), Postives = 47/74 (63.51%), Query Frame = 0
BLAST of MS019028 vs. ExPASy Swiss-Prot
Match: Q39644 (Late embryogenesis abundant protein Lea5 OS=Citrus sinensis OX=2711 GN=LEA5 PE=2 SV=1) HSP 1 Score: 61.6 bits (148), Expect = 4.1e-09 Identity = 33/66 (50.00%), Postives = 41/66 (62.12%), Query Frame = 0
BLAST of MS019028 vs. ExPASy Swiss-Prot
Match: P46522 (Late embryogenesis abundant protein Lea5-D OS=Gossypium hirsutum OX=3635 GN=LEA5-D PE=2 SV=1) HSP 1 Score: 58.5 bits (140), Expect = 3.5e-08 Identity = 36/77 (46.75%), Postives = 42/77 (54.55%), Query Frame = 0
BLAST of MS019028 vs. ExPASy Swiss-Prot
Match: P46521 (Late embryogenesis abundant protein Lea5-A OS=Gossypium hirsutum OX=3635 GN=LEA5-A PE=2 SV=1) HSP 1 Score: 58.2 bits (139), Expect = 4.5e-08 Identity = 35/77 (45.45%), Postives = 40/77 (51.95%), Query Frame = 0
BLAST of MS019028 vs. ExPASy TrEMBL
Match: A0A6J1DM52 (late embryogenis abundant protein 2-like OS=Momordica charantia OX=3673 GN=LOC111022452 PE=4 SV=1) HSP 1 Score: 142.9 bits (359), Expect = 5.2e-31 Identity = 71/71 (100.00%), Postives = 71/71 (100.00%), Query Frame = 0
BLAST of MS019028 vs. ExPASy TrEMBL
Match: A0A6J1DPX0 (protein SENESCENCE-ASSOCIATED GENE 21, mitochondrial-like OS=Momordica charantia OX=3673 GN=LOC111022451 PE=4 SV=1) HSP 1 Score: 95.5 bits (236), Expect = 9.4e-17 Identity = 45/67 (67.16%), Postives = 54/67 (80.60%), Query Frame = 0
BLAST of MS019028 vs. ExPASy TrEMBL
Match: A0A6J1F2C1 (protein SENESCENCE-ASSOCIATED GENE 21, mitochondrial-like OS=Cucurbita moschata OX=3662 GN=LOC111441545 PE=4 SV=1) HSP 1 Score: 85.9 bits (211), Expect = 7.5e-14 Identity = 46/73 (63.01%), Postives = 53/73 (72.60%), Query Frame = 0
BLAST of MS019028 vs. ExPASy TrEMBL
Match: A0A6J1GAX2 (protein SENESCENCE-ASSOCIATED GENE 21, mitochondrial-like OS=Cucurbita moschata OX=3662 GN=LOC111452505 PE=4 SV=1) HSP 1 Score: 84.0 bits (206), Expect = 2.8e-13 Identity = 47/83 (56.63%), Postives = 54/83 (65.06%), Query Frame = 0
BLAST of MS019028 vs. ExPASy TrEMBL
Match: A0A6J1GC45 (protein SENESCENCE-ASSOCIATED GENE 21, mitochondrial-like OS=Cucurbita moschata OX=3662 GN=LOC111452622 PE=4 SV=1) HSP 1 Score: 83.2 bits (204), Expect = 4.8e-13 Identity = 44/68 (64.71%), Postives = 48/68 (70.59%), Query Frame = 0
BLAST of MS019028 vs. TAIR 10
Match: AT1G02820.1 (Late embryogenesis abundant 3 (LEA3) family protein ) HSP 1 Score: 64.7 bits (156), Expect = 3.4e-11 Identity = 31/67 (46.27%), Postives = 43/67 (64.18%), Query Frame = 0
BLAST of MS019028 vs. TAIR 10
Match: AT4G02380.1 (senescence-associated gene 21 ) HSP 1 Score: 62.0 bits (149), Expect = 2.2e-10 Identity = 36/74 (48.65%), Postives = 47/74 (63.51%), Query Frame = 0
BLAST of MS019028 vs. TAIR 10
Match: AT4G02380.2 (senescence-associated gene 21 ) HSP 1 Score: 60.8 bits (146), Expect = 5.0e-10 Identity = 35/74 (47.30%), Postives = 47/74 (63.51%), Query Frame = 0
BLAST of MS019028 vs. TAIR 10
Match: AT4G15910.1 (drought-induced 21 ) HSP 1 Score: 57.0 bits (136), Expect = 7.2e-09 Identity = 35/75 (46.67%), Postives = 42/75 (56.00%), Query Frame = 0
BLAST of MS019028 vs. TAIR 10
Match: AT3G53770.2 (late embryogenesis abundant 3 (LEA3) family protein ) HSP 1 Score: 50.8 bits (120), Expect = 5.1e-07 Identity = 22/54 (40.74%), Postives = 35/54 (64.81%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Bitter gourd (TR) v1
Date Performed: 2021-10-25 Position : 0 Zoom : x 1
Relationships
The following mRNA feature(s) are a part of this gene:
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