MS019006 (gene) Bitter gourd (TR) v1

Overview


Name	MS019006
Type	gene
Organism	Momordica charantia cv. TR (Bitter gourd (TR) v1)
Description	neuronal acetylcholine receptor subunit alpha-2-like
Location	scaffold20: 647765 .. 648295 (-)
RNA-Seq Expression	MS019006
Synteny	MS019006

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGTCCAACATTAGATGGGTCGCCGCTCGCAGAGCATGGAAAATGCTGAGCAATTTGAAGATTCAGGCCCCCCATCGCCGGCGCCGCCCCTTCACGATGGATCTCCGCCTTGTGCGGTGGTTCATCAAGAGACTGGCCCACCCAATTAGCTCGATCCCGACCCCAACTCGTCCCCGCCCACATTATGCAGCAGAGCGGCAATTCTCATTCCAGGAGACCCCAAAATTCAGCCGGAATTTGCACCGCCGGCCGCCGTCAGCCGCGGCGCGTCTCCACCTGCCGCGGCTCCCGTGCATAAACCCGAAGGTTGTTGAATTTGATCGCGCGTTGGAGAGGCGTGTTGTGGTTGTTGATGAGGAGGAGGCCGGAGGGGAGGGGCGGTGGAGATTGGGCGGCGGCGCGTGTGATTATGAGGAGGAAGAAGGTGATATTGAGATTGATTTGAGAGCGGAGAAGTTTATAAGTATGTTTTATGAGGAGATGAAGATGCAGAATCAGATCTCGTATTTGCCGTATCATGAGTTTTCTGAT

mRNA sequence

ATGTCCAACATTAGATGGGTCGCCGCTCGCAGAGCATGGAAAATGCTGAGCAATTTGAAGATTCAGGCCCCCCATCGCCGGCGCCGCCCCTTCACGATGGATCTCCGCCTTGTGCGGTGGTTCATCAAGAGACTGGCCCACCCAATTAGCTCGATCCCGACCCCAACTCGTCCCCGCCCACATTATGCAGCAGAGCGGCAATTCTCATTCCAGGAGACCCCAAAATTCAGCCGGAATTTGCACCGCCGGCCGCCGTCAGCCGCGGCGCGTCTCCACCTGCCGCGGCTCCCGTGCATAAACCCGAAGGTTGTTGAATTTGATCGCGCGTTGGAGAGGCGTGTTGTGGTTGTTGATGAGGAGGAGGCCGGAGGGGAGGGGCGGTGGAGATTGGGCGGCGGCGCGTGTGATTATGAGGAGGAAGAAGGTGATATTGAGATTGATTTGAGAGCGGAGAAGTTTATAAGTATGTTTTATGAGGAGATGAAGATGCAGAATCAGATCTCGTATTTGCCGTATCATGAGTTTTCTGAT

Coding sequence (CDS)

ATGTCCAACATTAGATGGGTCGCCGCTCGCAGAGCATGGAAAATGCTGAGCAATTTGAAGATTCAGGCCCCCCATCGCCGGCGCCGCCCCTTCACGATGGATCTCCGCCTTGTGCGGTGGTTCATCAAGAGACTGGCCCACCCAATTAGCTCGATCCCGACCCCAACTCGTCCCCGCCCACATTATGCAGCAGAGCGGCAATTCTCATTCCAGGAGACCCCAAAATTCAGCCGGAATTTGCACCGCCGGCCGCCGTCAGCCGCGGCGCGTCTCCACCTGCCGCGGCTCCCGTGCATAAACCCGAAGGTTGTTGAATTTGATCGCGCGTTGGAGAGGCGTGTTGTGGTTGTTGATGAGGAGGAGGCCGGAGGGGAGGGGCGGTGGAGATTGGGCGGCGGCGCGTGTGATTATGAGGAGGAAGAAGGTGATATTGAGATTGATTTGAGAGCGGAGAAGTTTATAAGTATGTTTTATGAGGAGATGAAGATGCAGAATCAGATCTCGTATTTGCCGTATCATGAGTTTTCTGAT

Protein sequence

MSNIRWVAARRAWKMLSNLKIQAPHRRRRPFTMDLRLVRWFIKRLAHPISSIPTPTRPRPHYAAERQFSFQETPKFSRNLHRRPPSAAARLHLPRLPCINPKVVEFDRALERRVVVVDEEEAGGEGRWRLGGGACDYEEEEGDIEIDLRAEKFISMFYEEMKMQNQISYLPYHEFSD

Homology

[Close]

BLAST of MS019006 vs. NCBI nr
Match: XP_038906165.1 (uncharacterized protein LOC120092045 [Benincasa hispida])

HSP 1 Score: 167.9 bits (424), Expect = 7.7e-38
Identity = 105/184 (57.07%), Postives = 119/184 (64.67%), Query Frame = 0


Query: 1   MSNIRWVAARRAWKMLSNLKIQAPHRRRRPFTMDLRLVRWFIKRLAHPISSIPTPTRPRP 60
           MSN +  AARR WK+L   K    H  RRPF +D R +R FIKRL H IS+ PTP    P
Sbjct: 1   MSNTKCCAARRVWKILRQRKF---HTHRRPFPVDFRPLRRFIKRLVHSIST-PTPIPVHP 60

Query: 61  HYAAERQFSFQETPKFSRNLHRRPPSAAARL-HLPRLPCINPKVVEFDRALERRVVVVDE 120
           HY  ERQFSF +TP F    HR PPSA+A L H PR  CINPK VEFD   E RVV   +
Sbjct: 61  HY-VERQFSFNDTPIFHLKFHRCPPSASAALFHFPRFSCINPK-VEFDYEFESRVV---D 120

Query: 121 EEAGGEGRWRLGGGACDYEEEEGDIE------IDLRAEKFISMFYEEMKMQNQISYLPYH 178
           ++ GG  RWRL GG C YEEEE + E      IDL+AEKFI MFYEEMKMQ+Q+SYL   
Sbjct: 121 DDDGGWERWRL-GGTCGYEEEEEEEEEEEEDGIDLKAEKFIKMFYEEMKMQSQVSYLRLD 174

[Close]

BLAST of MS019006 vs. NCBI nr
Match: XP_011652950.1 (uncharacterized protein LOC105435158 [Cucumis sativus] >KGN52841.1 hypothetical protein Csa_014810 [Cucumis sativus])

HSP 1 Score: 129.8 bits (325), Expect = 2.3e-26
Identity = 91/182 (50.00%), Postives = 109/182 (59.89%), Query Frame = 0


Query: 2   SNIRWVAARRAWKMLSNLKIQAPHRRRRPFTMDLRLVRWFIKRLAHPISSIPTPTRPRPH 61
           +N R+   R+AWK++  L+    H  RR F +D R +R FIKR+ H     PTPT   PH
Sbjct: 3   NNTRFFHVRKAWKII--LRQWKLHSHRRAFPVDFRPLRRFIKRILH-----PTPTPLPPH 62

Query: 62  YAAERQFSFQETPKFSRNLH-RRPPSAAARLHL-PRLPCINPKVVEFDR----ALERRVV 121
           Y AERQFSF +TP F    H RR PSA+A L L PR  CINPK VEF+R      ERR  
Sbjct: 63  Y-AERQFSFNDTPIFHLKFHSRRAPSASAALFLIPRFSCINPK-VEFERYEDCEWERRNY 122

Query: 122 VVDEEEAGGEGRWRLGGGACDYEEEEGDIEIDLRAEKFISMFYEEMKMQNQISYLPYHEF 178
             +EEE                EEEE +  IDL+AEKFI MFYEEMKMQ+Q+SYL + EF
Sbjct: 123 EEEEEEE---------------EEEEEEDGIDLKAEKFIKMFYEEMKMQSQVSYLRFDEF 160

[Close]

BLAST of MS019006 vs. NCBI nr
Match: XP_008454304.1 (PREDICTED: neuronal acetylcholine receptor subunit alpha-2-like [Cucumis melo] >KAA0044406.1 neuronal acetylcholine receptor subunit alpha-2-like [Cucumis melo var. makuwa] >TYK29533.1 neuronal acetylcholine receptor subunit alpha-2-like [Cucumis melo var. makuwa])

HSP 1 Score: 119.0 bits (297), Expect = 4.1e-23
Identity = 83/170 (48.82%), Postives = 100/170 (58.82%), Query Frame = 0


Query: 10  RRAWKMLSNLKIQAPHRRRRPFTMDLRLVRWFIKRLAHPISSIPTPTRPRPHYAAERQFS 69
           R+ WK+L           RR F +D R +R FIKR+ H      TPT P PH+ AERQFS
Sbjct: 11  RKPWKIL-----------RRTFPVDFRPLRRFIKRIVH-----TTPT-PLPHHYAERQFS 70

Query: 70  FQETPKFSRNLHRRPPSAAA--RLHLPRLPCINPKVVEFDRALERRVVVVDEEEAGGEGR 129
           F +TP F    HRRPPSA+A     +PR  CINPK VEF+R  +      +EEE   E  
Sbjct: 71  FNDTPIF----HRRPPSASATTMFQIPRFSCINPK-VEFERYDDCEWEEEEEEEEEEE-- 130

Query: 130 WRLGGGACDYEEEEGDIEIDLRAEKFISMFYEEMKMQNQISYLPYHEFSD 178
                     EEEE +  IDL+AEKFI MFYEEMKMQ+Q+SYL + EFSD
Sbjct: 131 ---------EEEEEEEDGIDLKAEKFIKMFYEEMKMQSQVSYLRFDEFSD 147

[Close]

BLAST of MS019006 vs. NCBI nr
Match: XP_022934217.1 (uncharacterized protein LOC111441455 [Cucurbita moschata])

HSP 1 Score: 106.3 bits (264), Expect = 2.8e-19
Identity = 77/179 (43.02%), Postives = 88/179 (49.16%), Query Frame = 0


Query: 1   MSNIRWVAARRAWKMLSNLKIQAPHRRRRPFTMDLRLVRWFIKRLAHPISSIPTPTRPRP 60
           MS  +W AARRA K L + KI    R RR F +D R V  FIKRL HP    PTP RP  
Sbjct: 1   MSCTKWDAARRAMKFLRHWKIHTHRRYRRSFPVDFRHVWRFIKRLIHP---TPTPLRP-- 60

Query: 61  HYAAERQFSFQETPKFSRNLHRRPPSAAARLHLPRLPCINPKVVEFDRALERRVVVVDEE 120
            Y+AERQFSF + P     LHRRPP        P  P                       
Sbjct: 61  -YSAERQFSFNDNPIVHLKLHRRPP--------PSPP----------------------- 120

Query: 121 EAGGEGRWRLGGGACDYEEEEGDIE--IDLRAEKFISMFYEEMKMQNQISYLPYHEFSD 178
                         CDYE EE + E  ID +AEKFI MFYEEM++Q+Q+SYLP   FSD
Sbjct: 121 --------------CDYEAEEEEEEEGIDSKAEKFIKMFYEEMRLQSQVSYLPLDWFSD 128

[Close]

BLAST of MS019006 vs. NCBI nr
Match: KAG6581289.1 (hypothetical protein SDJN03_21291, partial [Cucurbita argyrosperma subsp. sororia] >KAG7018012.1 hypothetical protein SDJN02_19878, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 104.4 bits (259), Expect = 1.0e-18
Identity = 76/179 (42.46%), Postives = 87/179 (48.60%), Query Frame = 0


Query: 1   MSNIRWVAARRAWKMLSNLKIQAPHRRRRPFTMDLRLVRWFIKRLAHPISSIPTPTRPRP 60
           MS  +W AARRA K L + KI    R R  F +D R V  FIKRL HP    PTP RP  
Sbjct: 1   MSCTKWDAARRAMKFLRHWKIHTHRRYRHSFPVDFRHVWRFIKRLIHP---TPTPLRP-- 60

Query: 61  HYAAERQFSFQETPKFSRNLHRRPPSAAARLHLPRLPCINPKVVEFDRALERRVVVVDEE 120
            Y+AERQFSF + P     LHRRPP        P  P                       
Sbjct: 61  -YSAERQFSFNDNPIVHLKLHRRPP--------PSPP----------------------- 120

Query: 121 EAGGEGRWRLGGGACDYEEEEGDIE--IDLRAEKFISMFYEEMKMQNQISYLPYHEFSD 178
                         CDYE EE + E  ID +AEKFI MFYEEM++Q+Q+SYLP   FSD
Sbjct: 121 --------------CDYEAEEEEEEEGIDSKAEKFIKMFYEEMRLQSQVSYLPLDWFSD 128

[Close]

BLAST of MS019006 vs. ExPASy TrEMBL
Match: A0A0A0KYA9 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G002580 PE=4 SV=1)

HSP 1 Score: 129.8 bits (325), Expect = 1.1e-26
Identity = 91/182 (50.00%), Postives = 109/182 (59.89%), Query Frame = 0


Query: 2   SNIRWVAARRAWKMLSNLKIQAPHRRRRPFTMDLRLVRWFIKRLAHPISSIPTPTRPRPH 61
           +N R+   R+AWK++  L+    H  RR F +D R +R FIKR+ H     PTPT   PH
Sbjct: 3   NNTRFFHVRKAWKII--LRQWKLHSHRRAFPVDFRPLRRFIKRILH-----PTPTPLPPH 62

Query: 62  YAAERQFSFQETPKFSRNLH-RRPPSAAARLHL-PRLPCINPKVVEFDR----ALERRVV 121
           Y AERQFSF +TP F    H RR PSA+A L L PR  CINPK VEF+R      ERR  
Sbjct: 63  Y-AERQFSFNDTPIFHLKFHSRRAPSASAALFLIPRFSCINPK-VEFERYEDCEWERRNY 122

Query: 122 VVDEEEAGGEGRWRLGGGACDYEEEEGDIEIDLRAEKFISMFYEEMKMQNQISYLPYHEF 178
             +EEE                EEEE +  IDL+AEKFI MFYEEMKMQ+Q+SYL + EF
Sbjct: 123 EEEEEEE---------------EEEEEEDGIDLKAEKFIKMFYEEMKMQSQVSYLRFDEF 160

[Close]

BLAST of MS019006 vs. ExPASy TrEMBL
Match: A0A5D3E0E5 (Neuronal acetylcholine receptor subunit alpha-2-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold655G001360 PE=4 SV=1)

HSP 1 Score: 119.0 bits (297), Expect = 2.0e-23
Identity = 83/170 (48.82%), Postives = 100/170 (58.82%), Query Frame = 0


Query: 10  RRAWKMLSNLKIQAPHRRRRPFTMDLRLVRWFIKRLAHPISSIPTPTRPRPHYAAERQFS 69
           R+ WK+L           RR F +D R +R FIKR+ H      TPT P PH+ AERQFS
Sbjct: 11  RKPWKIL-----------RRTFPVDFRPLRRFIKRIVH-----TTPT-PLPHHYAERQFS 70

Query: 70  FQETPKFSRNLHRRPPSAAA--RLHLPRLPCINPKVVEFDRALERRVVVVDEEEAGGEGR 129
           F +TP F    HRRPPSA+A     +PR  CINPK VEF+R  +      +EEE   E  
Sbjct: 71  FNDTPIF----HRRPPSASATTMFQIPRFSCINPK-VEFERYDDCEWEEEEEEEEEEE-- 130

Query: 130 WRLGGGACDYEEEEGDIEIDLRAEKFISMFYEEMKMQNQISYLPYHEFSD 178
                     EEEE +  IDL+AEKFI MFYEEMKMQ+Q+SYL + EFSD
Sbjct: 131 ---------EEEEEEEDGIDLKAEKFIKMFYEEMKMQSQVSYLRFDEFSD 147

[Close]

BLAST of MS019006 vs. ExPASy TrEMBL
Match: A0A1S3BZI3 (neuronal acetylcholine receptor subunit alpha-2-like OS=Cucumis melo OX=3656 GN=LOC103494743 PE=4 SV=1)

HSP 1 Score: 119.0 bits (297), Expect = 2.0e-23
Identity = 83/170 (48.82%), Postives = 100/170 (58.82%), Query Frame = 0


Query: 10  RRAWKMLSNLKIQAPHRRRRPFTMDLRLVRWFIKRLAHPISSIPTPTRPRPHYAAERQFS 69
           R+ WK+L           RR F +D R +R FIKR+ H      TPT P PH+ AERQFS
Sbjct: 11  RKPWKIL-----------RRTFPVDFRPLRRFIKRIVH-----TTPT-PLPHHYAERQFS 70

Query: 70  FQETPKFSRNLHRRPPSAAA--RLHLPRLPCINPKVVEFDRALERRVVVVDEEEAGGEGR 129
           F +TP F    HRRPPSA+A     +PR  CINPK VEF+R  +      +EEE   E  
Sbjct: 71  FNDTPIF----HRRPPSASATTMFQIPRFSCINPK-VEFERYDDCEWEEEEEEEEEEE-- 130

Query: 130 WRLGGGACDYEEEEGDIEIDLRAEKFISMFYEEMKMQNQISYLPYHEFSD 178
                     EEEE +  IDL+AEKFI MFYEEMKMQ+Q+SYL + EFSD
Sbjct: 131 ---------EEEEEEEDGIDLKAEKFIKMFYEEMKMQSQVSYLRFDEFSD 147

[Close]

BLAST of MS019006 vs. ExPASy TrEMBL
Match: A0A6J1F231 (uncharacterized protein LOC111441455 OS=Cucurbita moschata OX=3662 GN=LOC111441455 PE=4 SV=1)

HSP 1 Score: 106.3 bits (264), Expect = 1.3e-19
Identity = 77/179 (43.02%), Postives = 88/179 (49.16%), Query Frame = 0


Query: 1   MSNIRWVAARRAWKMLSNLKIQAPHRRRRPFTMDLRLVRWFIKRLAHPISSIPTPTRPRP 60
           MS  +W AARRA K L + KI    R RR F +D R V  FIKRL HP    PTP RP  
Sbjct: 1   MSCTKWDAARRAMKFLRHWKIHTHRRYRRSFPVDFRHVWRFIKRLIHP---TPTPLRP-- 60

Query: 61  HYAAERQFSFQETPKFSRNLHRRPPSAAARLHLPRLPCINPKVVEFDRALERRVVVVDEE 120
            Y+AERQFSF + P     LHRRPP        P  P                       
Sbjct: 61  -YSAERQFSFNDNPIVHLKLHRRPP--------PSPP----------------------- 120

Query: 121 EAGGEGRWRLGGGACDYEEEEGDIE--IDLRAEKFISMFYEEMKMQNQISYLPYHEFSD 178
                         CDYE EE + E  ID +AEKFI MFYEEM++Q+Q+SYLP   FSD
Sbjct: 121 --------------CDYEAEEEEEEEGIDSKAEKFIKMFYEEMRLQSQVSYLPLDWFSD 128

[Close]

BLAST of MS019006 vs. ExPASy TrEMBL
Match: A0A444XGX3 (Uncharacterized protein OS=Arachis hypogaea OX=3818 GN=Ahy_B09g095848 PE=4 SV=1)

HSP 1 Score: 87.8 bits (216), Expect = 4.9e-14
Identity = 69/167 (41.32%), Postives = 95/167 (56.89%), Query Frame = 0


Query: 9   ARRAWKML--SNLKIQAPHRRRRPFTMDLRLVRWFIKRLAHPISSIPTPTRPRPHYAAER 68
           + RAWK+L  S L  +     +R   M+LRLV  ++KRL H  +S  +    + HY  ER
Sbjct: 11  SHRAWKLLRVSLLWARKGGVFKRRLAMELRLVPKYLKRLGHTTTS--SSQSNQIHY-FER 70

Query: 69  QFSFQETPKFSRNLHRRPPSAAARLHLPRLPCINPKVVEFDRALERRVVVVDEEEAGGEG 128
           + SF +TP F   ++ RP S+   LHLP +PCINP  V+FD   E      + +    E 
Sbjct: 71  ELSFDKTPIFHVKMY-RPNSSMRFLHLPHIPCINPH-VDFDYDFEDD----NADHNNHEE 130

Query: 129 RWRLGGGACDYEEEEGDIEIDLRAEKFISMFYEEMKMQNQISYLPYH 174
            W+  G     E+EEG   ID RAE+FI+ FYE+MK+Q QISYL Y+
Sbjct: 131 EWKDDG----EEQEEG---IDKRAEEFIAKFYEQMKLQRQISYLQYN 161

[Close]

BLAST of MS019006 vs. TAIR 10
Match: AT5G38700.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: mitochondrion; EXPRESSED IN: 10 plant structures; EXPRESSED DURING: LP.04 four leaves visible, LP.10 ten leaves visible, petal differentiation and expansion stage, LP.08 eight leaves visible, LP.12 twelve leaves visible; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT4G02170.1); Has 64 Blast hits to 64 proteins in 13 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 64; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 65.1 bits (157), Expect = 6.6e-11
Identity = 46/119 (38.66%), Postives = 66/119 (55.46%), Query Frame = 0


Query: 65  ERQFSFQETPKFSRNLHRRPPSAAARLHLPRLPCINPKVVEFDRALERRVVVVDEEEAGG 124
           E+Q SF ETP F+  +HR  P++   L    LPCI  +  +FD   E      D ++   
Sbjct: 69  EKQLSFDETPIFNVKMHR--PTSMRFL----LPCI-ARPADFDYDFELDGTQDDTDDVRS 128

Query: 125 EGRW------RLGGGACDYEEEEGDIEIDLRAEKFISMFYEEMKMQNQISYLPYHEFSD 178
            G +      +    A D +EEE +  +D+RAE+FI+ FYE+MK+Q QISYL Y E +D
Sbjct: 129 YGYYDGSCNEKCDRSANDDQEEEEEKGVDVRAEEFIAKFYEQMKLQRQISYLQYKEHND 180

[Close]

BLAST of MS019006 vs. TAIR 10
Match: AT4G02170.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G38700.1); Has 53 Blast hits to 53 proteins in 10 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 53; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 62.8 bits (151), Expect = 3.3e-10
Identity = 50/136 (36.76%), Postives = 73/136 (53.68%), Query Frame = 0


Query: 42  IKRLAHPISSIPTPTRPRPHYAAERQFSFQETPKFSRNLHRRPPSAAARLHLPRLPCINP 101
           +K LAH  S+          Y  ERQ SF ETP F+       P+++ R  L  LPC  P
Sbjct: 51  LKALAHHHSN-------GDRYYGERQLSFDETPLFNVKKKMHCPTSSMRFLL--LPCFAP 110

Query: 102 KVVEFDRALERRVVVVDEEEAGGEGRWRLGGGACDYEEEEGDIEIDLRAEKFISMFYEEM 161
             V+FD   E     +D ++   E +      +C  EEE+G   +D+RAE+FI+ FYE++
Sbjct: 111 P-VDFDYDFE-----MDGQDYSDEVQSYGYDESCS-EEEKG---VDVRAEEFIAKFYEQI 167

Query: 162 KMQNQISYLPYHEFSD 178
           K+Q Q+SYL Y + +D
Sbjct: 171 KLQRQVSYLKYKQHND 167

The following BLAST results are available for this feature:

BLAST of MS019006 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038906165.1	7.7e-38	57.07	uncharacterized protein LOC120092045 [Benincasa hispida]	[more]
XP_011652950.1	2.3e-26	50.00	uncharacterized protein LOC105435158 [Cucumis sativus] >KGN52841.1 hypothetical ...	[more]
XP_008454304.1	4.1e-23	48.82	PREDICTED: neuronal acetylcholine receptor subunit alpha-2-like [Cucumis melo] >...	[more]
XP_022934217.1	2.8e-19	43.02	uncharacterized protein LOC111441455 [Cucurbita moschata]	[more]
KAG6581289.1	1.0e-18	42.46	hypothetical protein SDJN03_21291, partial [Cucurbita argyrosperma subsp. sorori...	[more]

BLAST of MS019006 vs. NCBI nr


Match Name	E-value	Identity	Description

BLAST of MS019006 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0KYA9	1.1e-26	50.00	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G002580 PE=4 SV=1	[more]
A0A5D3E0E5	2.0e-23	48.82	Neuronal acetylcholine receptor subunit alpha-2-like OS=Cucumis melo var. makuwa...	[more]
A0A1S3BZI3	2.0e-23	48.82	neuronal acetylcholine receptor subunit alpha-2-like OS=Cucumis melo OX=3656 GN=...	[more]
A0A6J1F231	1.3e-19	43.02	uncharacterized protein LOC111441455 OS=Cucurbita moschata OX=3662 GN=LOC1114414...	[more]
A0A444XGX3	4.9e-14	41.32	Uncharacterized protein OS=Arachis hypogaea OX=3818 GN=Ahy_B09g095848 PE=4 SV=1	[more]

BLAST of MS019006 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G38700.1	6.6e-11	38.66	unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic...	[more]
AT4G02170.1	3.3e-10	36.76	unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TA...	[more]

InterPro

Analysis Name: InterPro Annotations of Bitter gourd (TR) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR008480	Protein of unknown function DUF761, plant	PFAM	PF05553	DUF761	coord: 145..174 e-value: 8.6E-10 score: 38.0
None	No IPR available	PANTHER	PTHR33265:SF5	COTTON FIBER PROTEIN	coord: 8..176
None	No IPR available	PANTHER	PTHR33265	AVR9/CF-9 RAPIDLY ELICITED PROTEIN-RELATED	coord: 8..176

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
MS019006.1	MS019006.1	mRNA