MS019005 (gene) Bitter gourd (TR) v1

Overview


Name	MS019005
Type	gene
Organism	Momordica charantia cv. TR (Bitter gourd (TR) v1)
Description	BEST Arabidopsis thaliana protein match is: 3'-5' exonuclease domain-containing protein / K homology domain-containing protein / KH domain-containing protein .
Location	scaffold20: 643356 .. 646402 (-)
RNA-Seq Expression	MS019005
Synteny	MS019005

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGGCGTCGAATCGAACTCTGCGGCACCGCCACCACCATCGTCGTCTTCTACACCTTCTCCGAGCGCGAAGCGAGCCAGAGATCCCGAAGATGAAGTTTATCTCGACAACTTCCACTCTCATAAGCGCTACCTCAGTGAGGTACCCTTTTGCGCCCTCAATTTACAGTTAGGTCGTCTGAAACTTTTACTTTTTAGACATTTTTAGAAAATTCTATCGGTTTGTAAACTGCGTAAGAAATTTCAGCGTCTAGGGTATGGATTATCCTGGTGTTTCTTCATTTGGATGAAATTGCTCTTTAAATTAGAATCGGTCATTTGATCGCTTTTTTTCTTTTACTGGAATTTTTATAATTCCTTTGATTTTTTTCCTCTTAACATTCATCCTTCCTGTATTGTTTTTGTTGCACAGATAATGGCTTCTAGTTTGAATGGATTGACGGTTGGGGACCCCCTCCCTGAGAATCTCATGGATTCTCCTGCAAGGTCGGAATCCATGCTTTATCTAAGGTAATGACATTTATTGCAAAAGAATTCAATTGATTTGTTTTTGTTGTTAAGAATATACGAACGGGAATTTTATTACATATGAAACGACAGGAACTTACATGAAGAAATGAAATTCTCCAATGTAACAAACCGTTTACTTTTAGAATGGCTTCGAAATGCCTCTGTGTATGGGAATTCTTGAACAAAACATTTTCTTGATTCCTTAGTTTAGTATCCTCAAGTTGGAGCTTACACTGTAAATAGAAGATTACATAGCTGATTCTGATGCTAACATTTCATTTTGCGATTTAATTAGCCCAACAAAGCCCAAAATCTCAAACTTCAAGACAGCTTTCCTAGATTCTTTCTGCCAGAGGGTATCCTATCCTACTTATATGCCAACTGAAGAAGTTTATAGTAGTTATCCAATGGATGATGGTGGTGTCATAACCAGGCAGGGTTCATGTTCTTGATGGCATATTCCGAGAATGGGAATTTTCATGGTTTTAATTTGTGATGTGCAACGAATTTGAACAGGATCTATTCTATAGTTTCTTCTACAATTGGCTCCAAGGGACGACCTTGTTGGCAAGAGCTTAGAGTCTCTTGGTCATACCGGTGTAGAGGTCTCAAGTTCGAACTTTTGGGTAAGCTTAATACAAAAAAACTCTTGATGTCTCCCGAGTCCAGGCTTTGGGGCAGGTGCGGGTGCCTCGGGTAGGAGAGCAAAGCTCCGACTCCCGGTTATAAAAAATGAAGGCTCTTCTACCACGGTGTCTTTTGAGTTCTAAAAGATTTGTGAGGTGTACATGCTTCATGCAAAAGATTGATAGATGTTTTGTGTACATTTCGAATTAATTTTGTTGTCCCACTACCCTTGGTTTGAGTCTTTCAGCGAAGGTGCATTCTTAGTTATAATCCGATAATGGAAAAGATGAGGAGATTCCATGGGGATGGGGATGCTTTTCCCTTTTCTTATCTTCTGAGTCCTGTAATTGATCGATTGTCCTTCTTCACTTCGTGTAGATTATATGTGTTGGAATACTTCAAATCCTGGTATGAATGTCAACATTTCCCTCCATCATTGCACTTGAAGAAGATTCTTTCTAGTAGATATGTACCACAACTTACTTTCATGAAACTTCACAATTTATTTGCCCTTTTTATGTTCTTCAAAGATTTACACAAGGATATAGATGTGATCTTTTAGGATTCGGATCTTTCTGCTCTGTAGAGTTAGCTATACGTTGTTGATAATATATTTGTTTACCTTTAGACTTCTATAAGGTTTAGTATGAAACTTCGGTTGGAAAAGAGATTAATATGTTTCAATTTCACTGACATGAAAAAAAAAAACATTGAATTACCTCTCAGCTCGACCGAAATGCAAGTTTCAGGAAACCTTTGTGCAACAAATGGCAGTCTTATCTTCTACAATTTCACAATGTTTTTATTCTAAAGCCTTTGAAAATTTATTACTATTGATGTAGGTTTTTATCAATAATCCCTTCTCTTTGACGGTGTAAGAAGCCTTGAACTACGATGGACTGGAGTAAAACATTATTGTCTGTGAAATCATGATCATCCTTAAATTAAGTTTAAGTTCTCCGGATCTCTTGTTCTCATCTTTGAATACAGCCATTTCGAGTTTCATGCAATTTCAGAGCCTTTTACTTCAACCCTTATGATTTTGGTTTAAAATTTTCCCCTCACTGCATTTTAAAATCCACCCCGTTTGGCCAACTTACGTGCACTAATTCGGTGAACAATAAATTCCCAACTGTCCAGTGTCCACCATGAGTCATCACTTACCTTTCGTGGTGGTACTTTGTTCAATATTTTTATCTTTCTTTTTTTTAAGTACATGATAGGAATTGACGTCAATTACTGCTGTGTTATGCTCATGGTGGCATATTTTTTATCTTTCTAAACGATGGTTTCAGTTTTCCCTGTTTTAATCAAATTTCATTTTTTCTGTCTTTAATCCTATTTTCCAGGGATGAAATGTCCTGGCAATATTCTCCTATGTCTGAAGATTCAGATGACTGCCGTTTTTGTGAGACATCCACAAACTTATTTCCTTTGCAGTCTGACAGTGTACCTACCAGTCCAGTCTCGCCATATCGATATCAAAGACCGTTCAGCACGGTGACTCCTTCAACAAGTACTAATAATAATTCACTTGGATGTTCTACTAGTCCCGTCCCTGGCTTGCAACCACATCAACGTGGATCAGATTCTGAGGGCCGTTTCCCGTCATCTCCCAGCGACATATGCCACTCGGCAGACTTGAGAAGGGCTGCGCTCTTGCGTTCTGTTCAAATGAGAGCACAACCTCCTGGTCCATCATCTATGGAGTTGCCATATTGCTCAATGCCTGAGCCTGGACCTAATATAGAAGCTGAGGAGCGGCCATGTGCTTTCATAAAATCGTTAGTCAATGAAAGAGTATATCAACTTGAGGAATGCTCCACAATGAGAGTGTCCGAACCCGAATATAACCAACAGAAACCGTGCAAGGACTTGAACAGGAATATGAAGGATAGTGAATCTGGAGAG

mRNA sequence

ATGGGCGTCGAATCGAACTCTGCGGCACCGCCACCACCATCGTCGTCTTCTACACCTTCTCCGAGCGCGAAGCGAGCCAGAGATCCCGAAGATGAAGTTTATCTCGACAACTTCCACTCTCATAAGCGCTACCTCAGTGAGATAATGGCTTCTAGTTTGAATGGATTGACGGTTGGGGACCCCCTCCCTGAGAATCTCATGGATTCTCCTGCAAGGTCGGAATCCATGCTTTATCTAAGGGATGAAATGTCCTGGCAATATTCTCCTATGTCTGAAGATTCAGATGACTGCCGTTTTTGTGAGACATCCACAAACTTATTTCCTTTGCAGTCTGACAGTGTACCTACCAGTCCAGTCTCGCCATATCGATATCAAAGACCGTTCAGCACGGTGACTCCTTCAACAAGTACTAATAATAATTCACTTGGATGTTCTACTAGTCCCGTCCCTGGCTTGCAACCACATCAACGTGGATCAGATTCTGAGGGCCGTTTCCCGTCATCTCCCAGCGACATATGCCACTCGGCAGACTTGAGAAGGGCTGCGCTCTTGCGTTCTGTTCAAATGAGAGCACAACCTCCTGGTCCATCATCTATGGAGTTGCCATATTGCTCAATGCCTGAGCCTGGACCTAATATAGAAGCTGAGGAGCGGCCATGTGCTTTCATAAAATCGTTAGTCAATGAAAGAGTATATCAACTTGAGGAATGCTCCACAATGAGAGTGTCCGAACCCGAATATAACCAACAGAAACCGTGCAAGGACTTGAACAGGAATATGAAGGATAGTGAATCTGGAGAG

Coding sequence (CDS)

ATGGGCGTCGAATCGAACTCTGCGGCACCGCCACCACCATCGTCGTCTTCTACACCTTCTCCGAGCGCGAAGCGAGCCAGAGATCCCGAAGATGAAGTTTATCTCGACAACTTCCACTCTCATAAGCGCTACCTCAGTGAGATAATGGCTTCTAGTTTGAATGGATTGACGGTTGGGGACCCCCTCCCTGAGAATCTCATGGATTCTCCTGCAAGGTCGGAATCCATGCTTTATCTAAGGGATGAAATGTCCTGGCAATATTCTCCTATGTCTGAAGATTCAGATGACTGCCGTTTTTGTGAGACATCCACAAACTTATTTCCTTTGCAGTCTGACAGTGTACCTACCAGTCCAGTCTCGCCATATCGATATCAAAGACCGTTCAGCACGGTGACTCCTTCAACAAGTACTAATAATAATTCACTTGGATGTTCTACTAGTCCCGTCCCTGGCTTGCAACCACATCAACGTGGATCAGATTCTGAGGGCCGTTTCCCGTCATCTCCCAGCGACATATGCCACTCGGCAGACTTGAGAAGGGCTGCGCTCTTGCGTTCTGTTCAAATGAGAGCACAACCTCCTGGTCCATCATCTATGGAGTTGCCATATTGCTCAATGCCTGAGCCTGGACCTAATATAGAAGCTGAGGAGCGGCCATGTGCTTTCATAAAATCGTTAGTCAATGAAAGAGTATATCAACTTGAGGAATGCTCCACAATGAGAGTGTCCGAACCCGAATATAACCAACAGAAACCGTGCAAGGACTTGAACAGGAATATGAAGGATAGTGAATCTGGAGAG

Protein sequence

MGVESNSAAPPPPSSSSTPSPSAKRARDPEDEVYLDNFHSHKRYLSEIMASSLNGLTVGDPLPENLMDSPARSESMLYLRDEMSWQYSPMSEDSDDCRFCETSTNLFPLQSDSVPTSPVSPYRYQRPFSTVTPSTSTNNNSLGCSTSPVPGLQPHQRGSDSEGRFPSSPSDICHSADLRRAALLRSVQMRAQPPGPSSMELPYCSMPEPGPNIEAEERPCAFIKSLVNERVYQLEECSTMRVSEPEYNQQKPCKDLNRNMKDSESGE

Homology

[Close]

BLAST of MS019005 vs. NCBI nr
Match: XP_022155254.1 (uncharacterized protein LOC111022394 isoform X1 [Momordica charantia])

HSP 1 Score: 527.3 bits (1357), Expect = 7.5e-146
Identity = 265/267 (99.25%), Postives = 265/267 (99.25%), Query Frame = 0


Query: 1   MGVESNSAAPPPPSSSSTPSPSAKRARDPEDEVYLDNFHSHKRYLSEIMASSLNGLTVGD 60
           MGVESNSAAPPPPSSSSTPSPSAKRARDPEDEVYLDNFHSHKRYLSEIMASSLNGLTVGD
Sbjct: 1   MGVESNSAAPPPPSSSSTPSPSAKRARDPEDEVYLDNFHSHKRYLSEIMASSLNGLTVGD 60

Query: 61  PLPENLMDSPARSESMLYLRDEMSWQYSPMSEDSDDCRFCETSTNLFPLQSDSVPTSPVS 120
           PLPENLMDSPARSESMLYLRDEMSWQYSPMSEDSDDCRFCETSTNLFPLQSDSVPTSPVS
Sbjct: 61  PLPENLMDSPARSESMLYLRDEMSWQYSPMSEDSDDCRFCETSTNLFPLQSDSVPTSPVS 120

Query: 121 PYRYQRPFSTVTPSTSTNNNSLGCSTSPVPGLQPHQRGSDSEGRFPSSPSDICHSADLRR 180
           PYRYQRPFSTVTPSTSTNNNSLGCSTSPVPGLQPHQRGSDSEGRFPSSPSDICHSADLRR
Sbjct: 121 PYRYQRPFSTVTPSTSTNNNSLGCSTSPVPGLQPHQRGSDSEGRFPSSPSDICHSADLRR 180

Query: 181 AALLRSVQMRAQPPGPSSMELPYCSMPEPGPNIEAEERPCAFIKSLVNERVYQLEECSTM 240
           AALLRSVQMRAQPPGPSSMELPYCSM EPGPNIEAEERPCAF KSLVNERVYQLEECSTM
Sbjct: 181 AALLRSVQMRAQPPGPSSMELPYCSMTEPGPNIEAEERPCAFTKSLVNERVYQLEECSTM 240

Query: 241 RVSEPEYNQQKPCKDLNRNMKDSESGE 268
           RVSEPEYNQQKPCKDLNRNMKDSESGE
Sbjct: 241 RVSEPEYNQQKPCKDLNRNMKDSESGE 267

[Close]

BLAST of MS019005 vs. NCBI nr
Match: XP_022984066.1 (uncharacterized protein LOC111482488 isoform X1 [Cucurbita maxima])

HSP 1 Score: 462.2 bits (1188), Expect = 3.0e-126
Identity = 240/267 (89.89%), Postives = 247/267 (92.51%), Query Frame = 0


Query: 1   MGVESNSAAPPPPSSSSTPSPSAKRARDPEDEVYLDNFHSHKRYLSEIMASSLNGLTVGD 60
           MGVESNSA PPPPSSSSTPSPS KRARDP+DEVYLDNFHSHKRYLSEIMASSLNGLTVGD
Sbjct: 1   MGVESNSAPPPPPSSSSTPSPSGKRARDPDDEVYLDNFHSHKRYLSEIMASSLNGLTVGD 60

Query: 61  PLPENLMDSPARSESMLYLRDEMSWQYSPMSEDSDDCRFCETSTNLFPLQSD-SVPTSPV 120
            L ENLMDSPARSESMLYLRDEMS QYSPMSEDSDDCRFCETSTNLFP QSD SVPTSPV
Sbjct: 61  SLSENLMDSPARSESMLYLRDEMSCQYSPMSEDSDDCRFCETSTNLFPSQSDNSVPTSPV 120

Query: 121 SPYRYQRPFSTVTPSTSTNNNSLGCSTSPVPGLQPHQRGSDSEGRFPSSPSDICHSADLR 180
           SPYRYQRPFS +TPST+T N SLGC+TSPV  LQPHQRGSDSEGRFPSSPSDICHSADLR
Sbjct: 121 SPYRYQRPFSGMTPSTAT-NTSLGCNTSPVTSLQPHQRGSDSEGRFPSSPSDICHSADLR 180

Query: 181 RAALLRSVQMRAQPPGPSSMELPYCSMPEPGPNIEAEERPCAFIKSLVNERVYQLEECST 240
           RAALLRSVQMRAQP GPSSMELPYCSMPEPGPNIEAEER C+FIKSLV+ERVYQL ECS 
Sbjct: 181 RAALLRSVQMRAQPHGPSSMELPYCSMPEPGPNIEAEERSCSFIKSLVDERVYQLGECSA 240

Query: 241 MRVSEPEYNQQKPCKDLNRNMKDSESG 267
           M VSEPEYN+QK CKDLNR MKD ESG
Sbjct: 241 MGVSEPEYNEQKSCKDLNREMKDGESG 266

[Close]

BLAST of MS019005 vs. NCBI nr
Match: XP_038904570.1 (uncharacterized protein LOC120090942 [Benincasa hispida])

HSP 1 Score: 461.5 bits (1186), Expect = 5.1e-126
Identity = 240/267 (89.89%), Postives = 249/267 (93.26%), Query Frame = 0


Query: 1   MGVESNSAAPPPPSSSSTPSPSAKRARDPEDEVYLDNFHSHKRYLSEIMASSLNGLTVGD 60
           MGVESNSA  PPPSSSSTPSPS KRARDP+DEVYLDNFHSHKRYLSEIMASSLNGLTVGD
Sbjct: 1   MGVESNSA--PPPSSSSTPSPSGKRARDPDDEVYLDNFHSHKRYLSEIMASSLNGLTVGD 60

Query: 61  PLPENLMDSPARSESMLYLRDEMSWQYSPMSEDSDDCRFCETSTNLFPLQSD-SVPTSPV 120
           PL ENLMDSPARSESMLY R+EMSWQYSPMSEDSDDCRFCETSTNLFP QSD SVPTSPV
Sbjct: 61  PLSENLMDSPARSESMLYQREEMSWQYSPMSEDSDDCRFCETSTNLFPTQSDSSVPTSPV 120

Query: 121 SPYRYQRPFSTVTPSTSTNNNSLGCSTSPVPGLQPHQRGSDSEGRFPSSPSDICHSADLR 180
           SPYRYQRPFS VTPST T N SLGCSTSPV  LQPHQRGSDSEGRFPSSPSDICHSADLR
Sbjct: 121 SPYRYQRPFSGVTPSTGT-NTSLGCSTSPVTSLQPHQRGSDSEGRFPSSPSDICHSADLR 180

Query: 181 RAALLRSVQMRAQPPGPSSMELPYCSMPEPGPNIEAEERPCAFIKSLVNERVYQLEECST 240
           RAALLRSVQMRAQP GPSSMELPYCSMPEPGPNIEAEERPC+ IKSLV+ER +QLEECS+
Sbjct: 181 RAALLRSVQMRAQPLGPSSMELPYCSMPEPGPNIEAEERPCSCIKSLVDERDFQLEECSS 240

Query: 241 MRVSEPEYNQQKPCKDLNRNMKDSESG 267
           M VSEPEYN++K CKDLNR+MKDSESG
Sbjct: 241 MGVSEPEYNEEKSCKDLNRDMKDSESG 264

[Close]

BLAST of MS019005 vs. NCBI nr
Match: XP_022934215.1 (uncharacterized protein LOC111441454 isoform X1 [Cucurbita moschata])

HSP 1 Score: 458.4 bits (1178), Expect = 4.3e-125
Identity = 240/270 (88.89%), Postives = 247/270 (91.48%), Query Frame = 0


Query: 1   MGVESNSAAPPPP---SSSSTPSPSAKRARDPEDEVYLDNFHSHKRYLSEIMASSLNGLT 60
           MGVESNS  PPPP   SSSSTPSPS KRARDP+DEVYLDNFHSHKRYLSEIMASSLNGLT
Sbjct: 1   MGVESNSGPPPPPPSSSSSSTPSPSGKRARDPDDEVYLDNFHSHKRYLSEIMASSLNGLT 60

Query: 61  VGDPLPENLMDSPARSESMLYLRDEMSWQYSPMSEDSDDCRFCETSTNLFPLQSD-SVPT 120
           VGDPL ENLMDSPARSESMLYLRDEMS QYSPMSEDSDDCRFCETSTNLFP QSD SVPT
Sbjct: 61  VGDPLSENLMDSPARSESMLYLRDEMSCQYSPMSEDSDDCRFCETSTNLFPSQSDSSVPT 120

Query: 121 SPVSPYRYQRPFSTVTPSTSTNNNSLGCSTSPVPGLQPHQRGSDSEGRFPSSPSDICHSA 180
           SPVSPYRYQRPFS +TPST T N SLGC+T PV  LQPHQRGSDSEGRFPSSPSDICHSA
Sbjct: 121 SPVSPYRYQRPFSGMTPSTGT-NTSLGCNTGPVTSLQPHQRGSDSEGRFPSSPSDICHSA 180

Query: 181 DLRRAALLRSVQMRAQPPGPSSMELPYCSMPEPGPNIEAEERPCAFIKSLVNERVYQLEE 240
           DLRRAALLRSVQMRAQP GPSSMELPYCSMPEPGPNIEAEER C+FIKSLV+ERVYQL E
Sbjct: 181 DLRRAALLRSVQMRAQPHGPSSMELPYCSMPEPGPNIEAEERSCSFIKSLVDERVYQLGE 240

Query: 241 CSTMRVSEPEYNQQKPCKDLNRNMKDSESG 267
           CS+M VSEPEYN+QK CKDLNR MKDSESG
Sbjct: 241 CSSMGVSEPEYNEQKSCKDLNREMKDSESG 269

[Close]

BLAST of MS019005 vs. NCBI nr
Match: KAG6581290.1 (hypothetical protein SDJN03_21292, partial [Cucurbita argyrosperma subsp. sororia] >KAG7018013.1 hypothetical protein SDJN02_19879 [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 458.0 bits (1177), Expect = 5.6e-125
Identity = 240/271 (88.56%), Postives = 247/271 (91.14%), Query Frame = 0


Query: 1   MGVESNSAAPPPP----SSSSTPSPSAKRARDPEDEVYLDNFHSHKRYLSEIMASSLNGL 60
           MGVESNS  PPPP    SSSSTPSPS KRARDP+DEVYLDNFHSHKRYLSEIMASSLNGL
Sbjct: 1   MGVESNSGPPPPPPPSSSSSSTPSPSGKRARDPDDEVYLDNFHSHKRYLSEIMASSLNGL 60

Query: 61  TVGDPLPENLMDSPARSESMLYLRDEMSWQYSPMSEDSDDCRFCETSTNLFPLQSD-SVP 120
           TVGDPL ENLMDSPARSESMLYLRDEMS QYSPMSEDSDDCRFCETSTNLFP QSD SVP
Sbjct: 61  TVGDPLSENLMDSPARSESMLYLRDEMSCQYSPMSEDSDDCRFCETSTNLFPSQSDSSVP 120

Query: 121 TSPVSPYRYQRPFSTVTPSTSTNNNSLGCSTSPVPGLQPHQRGSDSEGRFPSSPSDICHS 180
           TSPVSPYRYQRPFS +TPST T N SLGC+T PV  LQPHQRGSDSEGRFPSSPSDICHS
Sbjct: 121 TSPVSPYRYQRPFSGMTPSTGT-NTSLGCNTGPVTSLQPHQRGSDSEGRFPSSPSDICHS 180

Query: 181 ADLRRAALLRSVQMRAQPPGPSSMELPYCSMPEPGPNIEAEERPCAFIKSLVNERVYQLE 240
           ADLRRAALLRSVQMRAQP GPSSMELPYCSMPEPGPNIEAEER C+FIKSLV+ERVYQL 
Sbjct: 181 ADLRRAALLRSVQMRAQPHGPSSMELPYCSMPEPGPNIEAEERSCSFIKSLVDERVYQLG 240

Query: 241 ECSTMRVSEPEYNQQKPCKDLNRNMKDSESG 267
           ECS+M VSEPEYN+QK CKDLNR MKDSESG
Sbjct: 241 ECSSMGVSEPEYNEQKSCKDLNREMKDSESG 270

[Close]

BLAST of MS019005 vs. ExPASy TrEMBL
Match: A0A6J1DPQ3 (uncharacterized protein LOC111022394 isoform X1 OS=Momordica charantia OX=3673 GN=LOC111022394 PE=4 SV=1)

HSP 1 Score: 527.3 bits (1357), Expect = 3.7e-146
Identity = 265/267 (99.25%), Postives = 265/267 (99.25%), Query Frame = 0


Query: 1   MGVESNSAAPPPPSSSSTPSPSAKRARDPEDEVYLDNFHSHKRYLSEIMASSLNGLTVGD 60
           MGVESNSAAPPPPSSSSTPSPSAKRARDPEDEVYLDNFHSHKRYLSEIMASSLNGLTVGD
Sbjct: 1   MGVESNSAAPPPPSSSSTPSPSAKRARDPEDEVYLDNFHSHKRYLSEIMASSLNGLTVGD 60

Query: 61  PLPENLMDSPARSESMLYLRDEMSWQYSPMSEDSDDCRFCETSTNLFPLQSDSVPTSPVS 120
           PLPENLMDSPARSESMLYLRDEMSWQYSPMSEDSDDCRFCETSTNLFPLQSDSVPTSPVS
Sbjct: 61  PLPENLMDSPARSESMLYLRDEMSWQYSPMSEDSDDCRFCETSTNLFPLQSDSVPTSPVS 120

Query: 121 PYRYQRPFSTVTPSTSTNNNSLGCSTSPVPGLQPHQRGSDSEGRFPSSPSDICHSADLRR 180
           PYRYQRPFSTVTPSTSTNNNSLGCSTSPVPGLQPHQRGSDSEGRFPSSPSDICHSADLRR
Sbjct: 121 PYRYQRPFSTVTPSTSTNNNSLGCSTSPVPGLQPHQRGSDSEGRFPSSPSDICHSADLRR 180

Query: 181 AALLRSVQMRAQPPGPSSMELPYCSMPEPGPNIEAEERPCAFIKSLVNERVYQLEECSTM 240
           AALLRSVQMRAQPPGPSSMELPYCSM EPGPNIEAEERPCAF KSLVNERVYQLEECSTM
Sbjct: 181 AALLRSVQMRAQPPGPSSMELPYCSMTEPGPNIEAEERPCAFTKSLVNERVYQLEECSTM 240

Query: 241 RVSEPEYNQQKPCKDLNRNMKDSESGE 268
           RVSEPEYNQQKPCKDLNRNMKDSESGE
Sbjct: 241 RVSEPEYNQQKPCKDLNRNMKDSESGE 267

[Close]

BLAST of MS019005 vs. ExPASy TrEMBL
Match: A0A6J1J464 (uncharacterized protein LOC111482488 isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC111482488 PE=4 SV=1)

HSP 1 Score: 462.2 bits (1188), Expect = 1.4e-126
Identity = 240/267 (89.89%), Postives = 247/267 (92.51%), Query Frame = 0


Query: 1   MGVESNSAAPPPPSSSSTPSPSAKRARDPEDEVYLDNFHSHKRYLSEIMASSLNGLTVGD 60
           MGVESNSA PPPPSSSSTPSPS KRARDP+DEVYLDNFHSHKRYLSEIMASSLNGLTVGD
Sbjct: 1   MGVESNSAPPPPPSSSSTPSPSGKRARDPDDEVYLDNFHSHKRYLSEIMASSLNGLTVGD 60

Query: 61  PLPENLMDSPARSESMLYLRDEMSWQYSPMSEDSDDCRFCETSTNLFPLQSD-SVPTSPV 120
            L ENLMDSPARSESMLYLRDEMS QYSPMSEDSDDCRFCETSTNLFP QSD SVPTSPV
Sbjct: 61  SLSENLMDSPARSESMLYLRDEMSCQYSPMSEDSDDCRFCETSTNLFPSQSDNSVPTSPV 120

Query: 121 SPYRYQRPFSTVTPSTSTNNNSLGCSTSPVPGLQPHQRGSDSEGRFPSSPSDICHSADLR 180
           SPYRYQRPFS +TPST+T N SLGC+TSPV  LQPHQRGSDSEGRFPSSPSDICHSADLR
Sbjct: 121 SPYRYQRPFSGMTPSTAT-NTSLGCNTSPVTSLQPHQRGSDSEGRFPSSPSDICHSADLR 180

Query: 181 RAALLRSVQMRAQPPGPSSMELPYCSMPEPGPNIEAEERPCAFIKSLVNERVYQLEECST 240
           RAALLRSVQMRAQP GPSSMELPYCSMPEPGPNIEAEER C+FIKSLV+ERVYQL ECS 
Sbjct: 181 RAALLRSVQMRAQPHGPSSMELPYCSMPEPGPNIEAEERSCSFIKSLVDERVYQLGECSA 240

Query: 241 MRVSEPEYNQQKPCKDLNRNMKDSESG 267
           M VSEPEYN+QK CKDLNR MKD ESG
Sbjct: 241 MGVSEPEYNEQKSCKDLNREMKDGESG 266

[Close]

BLAST of MS019005 vs. ExPASy TrEMBL
Match: A0A6J1F722 (uncharacterized protein LOC111441454 isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111441454 PE=4 SV=1)

HSP 1 Score: 458.4 bits (1178), Expect = 2.1e-125
Identity = 240/270 (88.89%), Postives = 247/270 (91.48%), Query Frame = 0


Query: 1   MGVESNSAAPPPP---SSSSTPSPSAKRARDPEDEVYLDNFHSHKRYLSEIMASSLNGLT 60
           MGVESNS  PPPP   SSSSTPSPS KRARDP+DEVYLDNFHSHKRYLSEIMASSLNGLT
Sbjct: 1   MGVESNSGPPPPPPSSSSSSTPSPSGKRARDPDDEVYLDNFHSHKRYLSEIMASSLNGLT 60

Query: 61  VGDPLPENLMDSPARSESMLYLRDEMSWQYSPMSEDSDDCRFCETSTNLFPLQSD-SVPT 120
           VGDPL ENLMDSPARSESMLYLRDEMS QYSPMSEDSDDCRFCETSTNLFP QSD SVPT
Sbjct: 61  VGDPLSENLMDSPARSESMLYLRDEMSCQYSPMSEDSDDCRFCETSTNLFPSQSDSSVPT 120

Query: 121 SPVSPYRYQRPFSTVTPSTSTNNNSLGCSTSPVPGLQPHQRGSDSEGRFPSSPSDICHSA 180
           SPVSPYRYQRPFS +TPST T N SLGC+T PV  LQPHQRGSDSEGRFPSSPSDICHSA
Sbjct: 121 SPVSPYRYQRPFSGMTPSTGT-NTSLGCNTGPVTSLQPHQRGSDSEGRFPSSPSDICHSA 180

Query: 181 DLRRAALLRSVQMRAQPPGPSSMELPYCSMPEPGPNIEAEERPCAFIKSLVNERVYQLEE 240
           DLRRAALLRSVQMRAQP GPSSMELPYCSMPEPGPNIEAEER C+FIKSLV+ERVYQL E
Sbjct: 181 DLRRAALLRSVQMRAQPHGPSSMELPYCSMPEPGPNIEAEERSCSFIKSLVDERVYQLGE 240

Query: 241 CSTMRVSEPEYNQQKPCKDLNRNMKDSESG 267
           CS+M VSEPEYN+QK CKDLNR MKDSESG
Sbjct: 241 CSSMGVSEPEYNEQKSCKDLNREMKDSESG 269

[Close]

BLAST of MS019005 vs. ExPASy TrEMBL
Match: A0A0A0KWN0 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G003080 PE=4 SV=1)

HSP 1 Score: 457.6 bits (1176), Expect = 3.6e-125
Identity = 241/270 (89.26%), Postives = 248/270 (91.85%), Query Frame = 0


Query: 1   MGVESNSAAPPPPSSSSTPSPSAKRARDPEDEVYLDNFHSHKRYLSEIMASSLNGLTVGD 60
           MGVESNSA PPP SSSSTPSPS KRARDP+DEVYLDNFHSHKRYLSEIMASSLNGLTVGD
Sbjct: 1   MGVESNSAPPPPTSSSSTPSPSGKRARDPDDEVYLDNFHSHKRYLSEIMASSLNGLTVGD 60

Query: 61  PLPENLMDSPARSESMLYLRDEMSWQYSPMSEDSDDCRFCETSTNLFPLQSD-SVPTSPV 120
           PL ENLMDSPARSESMLY RDEMSWQYSPMSEDSDDCRFCETSTNLFP QSD SVPTSPV
Sbjct: 61  PLSENLMDSPARSESMLYQRDEMSWQYSPMSEDSDDCRFCETSTNLFPSQSDSSVPTSPV 120

Query: 121 SPYRYQRPFSTVTPSTSTNNNSLGCS-TSPVPGLQPHQRGSDSEGRFPSSPSDICHSADL 180
           SPYRYQRPFS V PST T N SLGCS TSPV  LQPHQRGSDSEGRFPSSPSDICHSADL
Sbjct: 121 SPYRYQRPFSGVAPSTGT-NTSLGCSTTSPVTSLQPHQRGSDSEGRFPSSPSDICHSADL 180

Query: 181 RRAALLRSVQMRAQPPGPSSMELPYCSMPEPGPNIEAEERPCAFIKSLVNERVYQLEECS 240
           RRAALLRSVQMRAQPPGPSSMELPYCSMPEPGPNIEAE+RPC+ IKSLV+ERVYQLEECS
Sbjct: 181 RRAALLRSVQMRAQPPGPSSMELPYCSMPEPGPNIEAEDRPCSCIKSLVDERVYQLEECS 240

Query: 241 TM--RVSEPEYNQQKPCKDLNRNMKDSESG 267
           +M   VSE EYN+QK CKDLNR+MKDS SG
Sbjct: 241 SMGLGVSESEYNEQKSCKDLNRDMKDSRSG 269

[Close]

BLAST of MS019005 vs. ExPASy TrEMBL
Match: A0A5A7TRC2 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold655G001370 PE=4 SV=1)

HSP 1 Score: 454.9 bits (1169), Expect = 2.3e-124
Identity = 239/270 (88.52%), Postives = 248/270 (91.85%), Query Frame = 0


Query: 1   MGVESNSAAPPPP-SSSSTPSPSAKRARDPEDEVYLDNFHSHKRYLSEIMASSLNGLTVG 60
           MGVESNSA PPPP SSSSTPSPS KRARDPEDEVYLDNFHSHKRYLSEIMASSLNGLTVG
Sbjct: 1   MGVESNSAPPPPPTSSSSTPSPSGKRARDPEDEVYLDNFHSHKRYLSEIMASSLNGLTVG 60

Query: 61  DPLPENLMDSPARSESMLYLRDEMSWQYSPMSEDSDDCRFCETSTNLFPLQSD-SVPTSP 120
           +PL ENLMDSPARSESMLY RDEMSWQYSPMSEDSDDCRFCETSTNLFP QSD SVPTSP
Sbjct: 61  EPLSENLMDSPARSESMLYQRDEMSWQYSPMSEDSDDCRFCETSTNLFPSQSDSSVPTSP 120

Query: 121 VSPYRYQRPFSTVTPSTSTNNNSLGCSTSPVPGLQPHQRGSDSEGRFPSSPSDICHSADL 180
           VSPYRYQRPFS + PS  T N SLGCSTSPV  LQPHQRGSDSEGRFPSSPSDICHSADL
Sbjct: 121 VSPYRYQRPFSGMAPSNGT-NTSLGCSTSPVTSLQPHQRGSDSEGRFPSSPSDICHSADL 180

Query: 181 RRAALLRSVQMRAQPPGPSSMELPYCSMPEPGPNIEAEERPCAFIKSLVNERVYQLEECS 240
           RRAALLRSVQMRAQP GPSSMELPYCSMPEPGPNIEAE+RPC+ IKSLV+ERVYQLEECS
Sbjct: 181 RRAALLRSVQMRAQPAGPSSMELPYCSMPEPGPNIEAEDRPCSCIKSLVDERVYQLEECS 240

Query: 241 TM--RVSEPEYNQQKPCKDLNRNMKDSESG 267
           +M   VSE EYN+QK CKDLNR+MKDS+SG
Sbjct: 241 SMGLGVSESEYNEQKSCKDLNRDMKDSQSG 269

[Close]

BLAST of MS019005 vs. TAIR 10
Match: AT2G25920.1 (BEST Arabidopsis thaliana protein match is: 3'-5' exonuclease domain-containing protein / K homology domain-containing protein / KH domain-containing protein (TAIR:AT2G25910.2); Has 131 Blast hits to 125 proteins in 54 species: Archae - 0; Bacteria - 50; Metazoa - 12; Fungi - 12; Plants - 41; Viruses - 0; Other Eukaryotes - 16 (source: NCBI BLink). )

HSP 1 Score: 225.3 bits (573), Expect = 5.7e-59
Identity = 145/272 (53.31%), Postives = 169/272 (62.13%), Query Frame = 0


Query: 2   GVESNSAAPPPPSSSSTPSPSAKRARDPEDEVYLDNFHSHKRYLSEIMASSLNGLTVGDP 61
           G      A  PP   S  SP  KR RDPEDEVYLDN  S KRYLSEIMA SLNGLTVGD 
Sbjct: 20  GKSLTQEANEPPVPISVSSPCGKRTRDPEDEVYLDNLRSQKRYLSEIMACSLNGLTVGDS 79

Query: 62  LPENLMDSPARSESMLYLRDEMSWQYSPMSEDSDDCRFCETST---NLFPLQSDSVPTSP 121
           LP N+++SPARSES LY RD++S QYSPMSEDSD+ RFCE  T   +    Q +S PTSP
Sbjct: 80  LPVNMLESPARSESFLYHRDDLSLQYSPMSEDSDEARFCEDPTATASTSSSQPESRPTSP 139

Query: 122 VSPYRYQRPFSTVT---PSTSTNNNSLGCSTSPVPGL------QPHQRGSDSEGRFPSSP 181
           VSPYRYQRP ++     PS +  ++S  C  S +         Q  QRGSD+EGRFPSSP
Sbjct: 140 VSPYRYQRPLTSTNSPQPSPTILHHSHTCPASMISNAATTTTPQSRQRGSDTEGRFPSSP 199

Query: 182 SDICHSADLRRAALLRSVQMRAQPPGPSSMELPYCSMPEPGPNIEAEERPCAFIKSLVNE 241
           SDICHS DLRR ALLRSVQMR QP G SS   P         NI+ EER C+  KS+  +
Sbjct: 200 SDICHSGDLRRTALLRSVQMRTQPCGYSSSSGP--------SNIDGEERMCS--KSMEED 259

Query: 242 RVYQL-EECSTMRVSEPEYNQQKPCKDLNRNM 261
           R Y   E+     VS    ++ K CK L+  +
Sbjct: 260 RGYNKGEDIPYAEVS----SKSKSCKALDMRL 277

The following BLAST results are available for this feature:

BLAST of MS019005 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022155254.1	7.5e-146	99.25	uncharacterized protein LOC111022394 isoform X1 [Momordica charantia]	[more]
XP_022984066.1	3.0e-126	89.89	uncharacterized protein LOC111482488 isoform X1 [Cucurbita maxima]	[more]
XP_038904570.1	5.1e-126	89.89	uncharacterized protein LOC120090942 [Benincasa hispida]	[more]
XP_022934215.1	4.3e-125	88.89	uncharacterized protein LOC111441454 isoform X1 [Cucurbita moschata]	[more]
KAG6581290.1	5.6e-125	88.56	hypothetical protein SDJN03_21292, partial [Cucurbita argyrosperma subsp. sorori...	[more]

BLAST of MS019005 vs. NCBI nr


Match Name	E-value	Identity	Description

BLAST of MS019005 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1DPQ3	3.7e-146	99.25	uncharacterized protein LOC111022394 isoform X1 OS=Momordica charantia OX=3673 G...	[more]
A0A6J1J464	1.4e-126	89.89	uncharacterized protein LOC111482488 isoform X1 OS=Cucurbita maxima OX=3661 GN=L...	[more]
A0A6J1F722	2.1e-125	88.89	uncharacterized protein LOC111441454 isoform X1 OS=Cucurbita moschata OX=3662 GN...	[more]
A0A0A0KWN0	3.6e-125	89.26	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G003080 PE=4 SV=1	[more]
A0A5A7TRC2	2.3e-124	88.52	Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold...	[more]

BLAST of MS019005 vs. TAIR 10


Match Name	E-value	Identity	Description
AT2G25920.1	5.7e-59	53.31	BEST Arabidopsis thaliana protein match is: 3'-5' exonuclease domain-containing ...	[more]

InterPro

Analysis Name: InterPro Annotations of Bitter gourd (TR) v1
Date Performed: 2021-10-25

Position :

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x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 128..171
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 242..267
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..31
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 128..168
None	No IPR available	PANTHER	PTHR35717	OS05G0156200 PROTEIN	coord: 2..265
None	No IPR available	PANTHER	PTHR35717:SF1	OS05G0156200 PROTEIN	coord: 2..265

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
MS019005.1	MS019005.1	mRNA