MS018996 (gene) Bitter gourd (TR) v1

Overview


Name	MS018996
Type	gene
Organism	Momordica charantia cv. TR (Bitter gourd (TR) v1)
Description	rRNA adenine N(6)-methyltransferase
Location	scaffold20: 541808 .. 543466 (+)
RNA-Seq Expression	MS018996
Synteny	MS018996

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCGGGGGGCAAGATGAAGAGGGAGAAGCCAAAGGCGGCGACGAAGAGTACACCGTATCAGGGAGGGATTTCGTTCCACAAATCCAAAGGTCAGCATATTCTTAAAAATCCTTTGTTGGTCGACTCTATAGTTCAAAAGTCTGGAATCAAGAGCACCGATGTGATCCTTGAAATCGGTCCCGGTACTGGTAATCTCACCAAGAAGCTTCTTGAATGCGGTAAGATGGTTATTGCAGTCGAGCTTGATCCTCGTATGGTTCTCGAGTTGCAGAGGCGGTTTCAGGACACTCCTTATTCTACTCGGTTGAAGGTGGGTTTTCGTATTTGTTTGCATTTTTAGAGTAAGTTTGAATGATCTCTGTGCTTGATTGTGGATAGAAGTTGAATTTTCTTATGCCCATTAATTCTTCTTTTTTTTTTTTTTCCTTATCTCTACATCCTTTTACAATCAGTAGGGATTTGTTTGAGGATTTAGTTTAGTTGATGTATTGTCCACGGGATTGTACTTCTTCTTGAAGTTCAAATTCCTTTCAGTAGTACGAAGAAATTGTACCAACATTTAACCTTTCCCTTTTGTAGGAGGCAAAATAGTGGAAGAGGAAAAAGTATAATCTTCAAAGTAGTTTTGCTTACCTAATATTTTATGAACTTCAGACTAAAATACCTTCCATAATCTGTCAACTTTCTGAAACAAACCGTGGATTGGCTTTATCTCATCAAATTATCTTAACAACTGCTGGAATGAACCAACCTATTGTTCTGTATTAGCAGATGTGTTCTTGTGCTTGTGCTTGTCTAAATTGTGGTTAAGAAATGAATTTGTGTTGGTTTTTTACTTGATTCTTAATTTGATTTTCTCTAACATGATCAATAATTGACTAGTTCTTTAATTCGATGCGCACAGGTTATCCAAGGAGATGTTCTCAAGACTGAACTTCCCTATTTTGATATATGTGTTGCAAATATTCCTTATCAAATATCATCTCCTCTCACATTCAAGTTGCTAAATCATCAACCTTCGTTTCGGTGTGCAATCATAATGTTCCAGAGGGAATTTGCAATGAGGCTAGTTGCTCAACCTGGTGACAAACTTTACTGTCGTTTAACTGTAAACACCCAACTCCTAGCTCGAGTATCCCACCTCCTCAAAGTTGGGAAGAACAATTTCCGTCCTCCACCAAAGGTGGACTCGTCTGTAGTTCGAATTGAGCCCAGGAAACCGCGTATTGAGGTGAAGCAAAAGGAGTGGGATGGATTTTTGAGAATCTGTTTCAATCGAAAGAACAAGACCCTCGGTTCAATTTTTAGGCAGAAGAGTGTTCTTACTTTGCTAGAAAAGAACTACAAGACGTTGTGTGCACTTAATCTCCCTCAGCAAGGTTCTGCCAATAACGACGATGGTGATTTTGATTATTCGAGATTTGGCGATTCGAATGAGGATCAAACCATGGAAGTAGACGACGATGGAGCTGACGAAGAGATGGATATGGACGATAGTGATGCCGAAGTGGGGGAGGGGGAGGCTTCTGAATTTAAGAATAAGGTTTTGAGTGTTCTGAAGGAGGGAGATTTTGAAGAGAAGAGGTCATCTAAACTCACCTTACAAGAGTTCTTATACCTACTCTCTTTGTTCAACAAAGCTGGTATCCATTTTTCT

mRNA sequence

ATGGCGGGGGGCAAGATGAAGAGGGAGAAGCCAAAGGCGGCGACGAAGAGTACACCGTATCAGGGAGGGATTTCGTTCCACAAATCCAAAGGTCAGCATATTCTTAAAAATCCTTTGTTGGTCGACTCTATAGTTCAAAAGTCTGGAATCAAGAGCACCGATGTGATCCTTGAAATCGGTCCCGGTACTGGTAATCTCACCAAGAAGCTTCTTGAATGCGGTAAGATGGTTATTGCAGTCGAGCTTGATCCTCGTATGGTTCTCGAGTTGCAGAGGCGGTTTCAGGACACTCCTTATTCTACTCGGTTGAAGGTTATCCAAGGAGATGTTCTCAAGACTGAACTTCCCTATTTTGATATATGTGTTGCAAATATTCCTTATCAAATATCATCTCCTCTCACATTCAAGTTGCTAAATCATCAACCTTCGTTTCGGTGTGCAATCATAATGTTCCAGAGGGAATTTGCAATGAGGCTAGTTGCTCAACCTGGTGACAAACTTTACTGTCGTTTAACTGTAAACACCCAACTCCTAGCTCGAGTATCCCACCTCCTCAAAGTTGGGAAGAACAATTTCCGTCCTCCACCAAAGGTGGACTCGTCTGTAGTTCGAATTGAGCCCAGGAAACCGCGTATTGAGGTGAAGCAAAAGGAGTGGGATGGATTTTTGAGAATCTGTTTCAATCGAAAGAACAAGACCCTCGGTTCAATTTTTAGGCAGAAGAGTGTTCTTACTTTGCTAGAAAAGAACTACAAGACGTTGTGTGCACTTAATCTCCCTCAGCAAGGTTCTGCCAATAACGACGATGGTGATTTTGATTATTCGAGATTTGGCGATTCGAATGAGGATCAAACCATGGAAGTAGACGACGATGGAGCTGACGAAGAGATGGATATGGACGATAGTGATGCCGAAGTGGGGGAGGGGGAGGCTTCTGAATTTAAGAATAAGGTTTTGAGTGTTCTGAAGGAGGGAGATTTTGAAGAGAAGAGGTCATCTAAACTCACCTTACAAGAGTTCTTATACCTACTCTCTTTGTTCAACAAAGCTGGTATCCATTTTTCT

Coding sequence (CDS)

ATGGCGGGGGGCAAGATGAAGAGGGAGAAGCCAAAGGCGGCGACGAAGAGTACACCGTATCAGGGAGGGATTTCGTTCCACAAATCCAAAGGTCAGCATATTCTTAAAAATCCTTTGTTGGTCGACTCTATAGTTCAAAAGTCTGGAATCAAGAGCACCGATGTGATCCTTGAAATCGGTCCCGGTACTGGTAATCTCACCAAGAAGCTTCTTGAATGCGGTAAGATGGTTATTGCAGTCGAGCTTGATCCTCGTATGGTTCTCGAGTTGCAGAGGCGGTTTCAGGACACTCCTTATTCTACTCGGTTGAAGGTTATCCAAGGAGATGTTCTCAAGACTGAACTTCCCTATTTTGATATATGTGTTGCAAATATTCCTTATCAAATATCATCTCCTCTCACATTCAAGTTGCTAAATCATCAACCTTCGTTTCGGTGTGCAATCATAATGTTCCAGAGGGAATTTGCAATGAGGCTAGTTGCTCAACCTGGTGACAAACTTTACTGTCGTTTAACTGTAAACACCCAACTCCTAGCTCGAGTATCCCACCTCCTCAAAGTTGGGAAGAACAATTTCCGTCCTCCACCAAAGGTGGACTCGTCTGTAGTTCGAATTGAGCCCAGGAAACCGCGTATTGAGGTGAAGCAAAAGGAGTGGGATGGATTTTTGAGAATCTGTTTCAATCGAAAGAACAAGACCCTCGGTTCAATTTTTAGGCAGAAGAGTGTTCTTACTTTGCTAGAAAAGAACTACAAGACGTTGTGTGCACTTAATCTCCCTCAGCAAGGTTCTGCCAATAACGACGATGGTGATTTTGATTATTCGAGATTTGGCGATTCGAATGAGGATCAAACCATGGAAGTAGACGACGATGGAGCTGACGAAGAGATGGATATGGACGATAGTGATGCCGAAGTGGGGGAGGGGGAGGCTTCTGAATTTAAGAATAAGGTTTTGAGTGTTCTGAAGGAGGGAGATTTTGAAGAGAAGAGGTCATCTAAACTCACCTTACAAGAGTTCTTATACCTACTCTCTTTGTTCAACAAAGCTGGTATCCATTTTTCT

Protein sequence

MAGGKMKREKPKAATKSTPYQGGISFHKSKGQHILKNPLLVDSIVQKSGIKSTDVILEIGPGTGNLTKKLLECGKMVIAVELDPRMVLELQRRFQDTPYSTRLKVIQGDVLKTELPYFDICVANIPYQISSPLTFKLLNHQPSFRCAIIMFQREFAMRLVAQPGDKLYCRLTVNTQLLARVSHLLKVGKNNFRPPPKVDSSVVRIEPRKPRIEVKQKEWDGFLRICFNRKNKTLGSIFRQKSVLTLLEKNYKTLCALNLPQQGSANNDDGDFDYSRFGDSNEDQTMEVDDDGADEEMDMDDSDAEVGEGEASEFKNKVLSVLKEGDFEEKRSSKLTLQEFLYLLSLFNKAGIHFS

Homology

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BLAST of MS018996 vs. NCBI nr
Match: XP_022155324.1 (ribosomal RNA small subunit methyltransferase [Momordica charantia])

HSP 1 Score: 696.4 bits (1796), Expect = 1.2e-196
Identity = 355/355 (100.00%), Postives = 355/355 (100.00%), Query Frame = 0


Query: 1   MAGGKMKREKPKAATKSTPYQGGISFHKSKGQHILKNPLLVDSIVQKSGIKSTDVILEIG 60
           MAGGKMKREKPKAATKSTPYQGGISFHKSKGQHILKNPLLVDSIVQKSGIKSTDVILEIG
Sbjct: 1   MAGGKMKREKPKAATKSTPYQGGISFHKSKGQHILKNPLLVDSIVQKSGIKSTDVILEIG 60

Query: 61  PGTGNLTKKLLECGKMVIAVELDPRMVLELQRRFQDTPYSTRLKVIQGDVLKTELPYFDI 120
           PGTGNLTKKLLECGKMVIAVELDPRMVLELQRRFQDTPYSTRLKVIQGDVLKTELPYFDI
Sbjct: 61  PGTGNLTKKLLECGKMVIAVELDPRMVLELQRRFQDTPYSTRLKVIQGDVLKTELPYFDI 120

Query: 121 CVANIPYQISSPLTFKLLNHQPSFRCAIIMFQREFAMRLVAQPGDKLYCRLTVNTQLLAR 180
           CVANIPYQISSPLTFKLLNHQPSFRCAIIMFQREFAMRLVAQPGDKLYCRLTVNTQLLAR
Sbjct: 121 CVANIPYQISSPLTFKLLNHQPSFRCAIIMFQREFAMRLVAQPGDKLYCRLTVNTQLLAR 180

Query: 181 VSHLLKVGKNNFRPPPKVDSSVVRIEPRKPRIEVKQKEWDGFLRICFNRKNKTLGSIFRQ 240
           VSHLLKVGKNNFRPPPKVDSSVVRIEPRKPRIEVKQKEWDGFLRICFNRKNKTLGSIFRQ
Sbjct: 181 VSHLLKVGKNNFRPPPKVDSSVVRIEPRKPRIEVKQKEWDGFLRICFNRKNKTLGSIFRQ 240

Query: 241 KSVLTLLEKNYKTLCALNLPQQGSANNDDGDFDYSRFGDSNEDQTMEVDDDGADEEMDMD 300
           KSVLTLLEKNYKTLCALNLPQQGSANNDDGDFDYSRFGDSNEDQTMEVDDDGADEEMDMD
Sbjct: 241 KSVLTLLEKNYKTLCALNLPQQGSANNDDGDFDYSRFGDSNEDQTMEVDDDGADEEMDMD 300

Query: 301 DSDAEVGEGEASEFKNKVLSVLKEGDFEEKRSSKLTLQEFLYLLSLFNKAGIHFS 356
           DSDAEVGEGEASEFKNKVLSVLKEGDFEEKRSSKLTLQEFLYLLSLFNKAGIHFS
Sbjct: 301 DSDAEVGEGEASEFKNKVLSVLKEGDFEEKRSSKLTLQEFLYLLSLFNKAGIHFS 355

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BLAST of MS018996 vs. NCBI nr
Match: XP_023525787.1 (ribosomal RNA small subunit methyltransferase [Cucurbita pepo subsp. pepo])

HSP 1 Score: 668.3 bits (1723), Expect = 3.6e-188
Identity = 337/355 (94.93%), Postives = 349/355 (98.31%), Query Frame = 0


Query: 1   MAGGKMKREKPKAATKSTPYQGGISFHKSKGQHILKNPLLVDSIVQKSGIKSTDVILEIG 60
           MAGGKMKREKPKA+ K+ PYQGGISFHKSKGQHILKNP+LVDSIVQKSGIKSTDVILEIG
Sbjct: 1   MAGGKMKREKPKASAKTAPYQGGISFHKSKGQHILKNPMLVDSIVQKSGIKSTDVILEIG 60

Query: 61  PGTGNLTKKLLECGKMVIAVELDPRMVLELQRRFQDTPYSTRLKVIQGDVLKTELPYFDI 120
           PGTGNLTKKLLECGKMVIAVELDPRMVLELQRRFQDTPYS+RLKVIQGDVLKTELPYFDI
Sbjct: 61  PGTGNLTKKLLECGKMVIAVELDPRMVLELQRRFQDTPYSSRLKVIQGDVLKTELPYFDI 120

Query: 121 CVANIPYQISSPLTFKLLNHQPSFRCAIIMFQREFAMRLVAQPGDKLYCRLTVNTQLLAR 180
           CVANIPYQISSPLTFKLLNHQPSFRCAIIMFQREFAMRLVAQPGDKLYCRLTVNTQLL+R
Sbjct: 121 CVANIPYQISSPLTFKLLNHQPSFRCAIIMFQREFAMRLVAQPGDKLYCRLTVNTQLLSR 180

Query: 181 VSHLLKVGKNNFRPPPKVDSSVVRIEPRKPRIEVKQKEWDGFLRICFNRKNKTLGSIFRQ 240
           VSHLLKVGKNNFRPPPKVDSSVVRIEPRKPRIEVKQKEWDGFLRICFNRKNKTLGSIFRQ
Sbjct: 181 VSHLLKVGKNNFRPPPKVDSSVVRIEPRKPRIEVKQKEWDGFLRICFNRKNKTLGSIFRQ 240

Query: 241 KSVLTLLEKNYKTLCALNLPQQGSANNDDGDFDYSRFGDSNEDQTMEVDDDGADEEMDMD 300
           KSVL+LLEKNYKTLCALN+PQQGSA+ DDGDFDYSRFG+SNEDQTMEVDDDG DEEMDMD
Sbjct: 241 KSVLSLLEKNYKTLCALNIPQQGSADKDDGDFDYSRFGNSNEDQTMEVDDDGGDEEMDMD 300

Query: 301 DSDAEVGEGEASEFKNKVLSVLKEGDFEEKRSSKLTLQEFLYLLSLFNKAGIHFS 356
           DSDAE GEGEASEFK+KV+ VLKEGDFEEKRSSKL+LQEFLYLLSLFNKAGIHFS
Sbjct: 301 DSDAEGGEGEASEFKDKVMGVLKEGDFEEKRSSKLSLQEFLYLLSLFNKAGIHFS 355

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BLAST of MS018996 vs. NCBI nr
Match: XP_022998306.1 (ribosomal RNA small subunit methyltransferase [Cucurbita maxima])

HSP 1 Score: 667.2 bits (1720), Expect = 8.1e-188
Identity = 337/355 (94.93%), Postives = 349/355 (98.31%), Query Frame = 0


Query: 1   MAGGKMKREKPKAATKSTPYQGGISFHKSKGQHILKNPLLVDSIVQKSGIKSTDVILEIG 60
           MAGGKMKREKPKA+ K+ PYQGGISFHKSKGQHILKNP+LVDSIVQKSGIKSTDVILEIG
Sbjct: 1   MAGGKMKREKPKASAKTAPYQGGISFHKSKGQHILKNPMLVDSIVQKSGIKSTDVILEIG 60

Query: 61  PGTGNLTKKLLECGKMVIAVELDPRMVLELQRRFQDTPYSTRLKVIQGDVLKTELPYFDI 120
           PGTGNLTKKLLECGKMVIAVELDPRMVLELQRRFQDTPYS+RLKVIQGDVLKTELPYFDI
Sbjct: 61  PGTGNLTKKLLECGKMVIAVELDPRMVLELQRRFQDTPYSSRLKVIQGDVLKTELPYFDI 120

Query: 121 CVANIPYQISSPLTFKLLNHQPSFRCAIIMFQREFAMRLVAQPGDKLYCRLTVNTQLLAR 180
           CVANIPYQISSPLTFKLLNHQPSFRCAIIMFQREFAMRLVAQPGDKLYCRLTVNTQLL+R
Sbjct: 121 CVANIPYQISSPLTFKLLNHQPSFRCAIIMFQREFAMRLVAQPGDKLYCRLTVNTQLLSR 180

Query: 181 VSHLLKVGKNNFRPPPKVDSSVVRIEPRKPRIEVKQKEWDGFLRICFNRKNKTLGSIFRQ 240
           VSHLLKVGKNNFRPPPKVDSSVVRIEPRKPRIEVKQKEWDGFLRICFNRKNKTLGSIFRQ
Sbjct: 181 VSHLLKVGKNNFRPPPKVDSSVVRIEPRKPRIEVKQKEWDGFLRICFNRKNKTLGSIFRQ 240

Query: 241 KSVLTLLEKNYKTLCALNLPQQGSANNDDGDFDYSRFGDSNEDQTMEVDDDGADEEMDMD 300
           KSVL+LLEKNYKTLCALN+PQQGSA+ DDGDFDYSRFG+SNEDQTMEVDDDGADEEMDMD
Sbjct: 241 KSVLSLLEKNYKTLCALNIPQQGSADKDDGDFDYSRFGNSNEDQTMEVDDDGADEEMDMD 300

Query: 301 DSDAEVGEGEASEFKNKVLSVLKEGDFEEKRSSKLTLQEFLYLLSLFNKAGIHFS 356
            SDAE GEGEASEFK+KV+ VLKEGDFEEKRSSKL+LQEFLYLLSLFNKAGIHFS
Sbjct: 301 GSDAEGGEGEASEFKDKVMGVLKEGDFEEKRSSKLSLQEFLYLLSLFNKAGIHFS 355

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BLAST of MS018996 vs. NCBI nr
Match: KAG6606941.1 (Ribosomal RNA small subunit methyltransferase, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 666.4 bits (1718), Expect = 1.4e-187
Identity = 336/355 (94.65%), Postives = 348/355 (98.03%), Query Frame = 0


Query: 1   MAGGKMKREKPKAATKSTPYQGGISFHKSKGQHILKNPLLVDSIVQKSGIKSTDVILEIG 60
           MAGGKMKREKPKA  K+ PYQGGISFHKSKGQHILKNP+LVDSIVQKSGIKSTDVILEIG
Sbjct: 1   MAGGKMKREKPKALAKTAPYQGGISFHKSKGQHILKNPMLVDSIVQKSGIKSTDVILEIG 60

Query: 61  PGTGNLTKKLLECGKMVIAVELDPRMVLELQRRFQDTPYSTRLKVIQGDVLKTELPYFDI 120
           PGTGNLTKKLLECGKMVIAVELDPRMVLELQRRFQDTPYS+RLKVIQGDVLKTELPYFDI
Sbjct: 61  PGTGNLTKKLLECGKMVIAVELDPRMVLELQRRFQDTPYSSRLKVIQGDVLKTELPYFDI 120

Query: 121 CVANIPYQISSPLTFKLLNHQPSFRCAIIMFQREFAMRLVAQPGDKLYCRLTVNTQLLAR 180
           CVANIPYQISSPLTFKLLNHQPSFRCAIIMFQREFAMRLVAQPGDKLYCRLTVNTQLL+R
Sbjct: 121 CVANIPYQISSPLTFKLLNHQPSFRCAIIMFQREFAMRLVAQPGDKLYCRLTVNTQLLSR 180

Query: 181 VSHLLKVGKNNFRPPPKVDSSVVRIEPRKPRIEVKQKEWDGFLRICFNRKNKTLGSIFRQ 240
           VSHLLKVGKNNFRPPPKVDSSVVRIEPRKPRIEVKQKEWDGFLRICFNRKNKTLGSIFRQ
Sbjct: 181 VSHLLKVGKNNFRPPPKVDSSVVRIEPRKPRIEVKQKEWDGFLRICFNRKNKTLGSIFRQ 240

Query: 241 KSVLTLLEKNYKTLCALNLPQQGSANNDDGDFDYSRFGDSNEDQTMEVDDDGADEEMDMD 300
           KSVL+LLEKNYKTLCALN+PQQGSA+ DDGDFDYSRFG+SNEDQTMEVDDDG DEEMDMD
Sbjct: 241 KSVLSLLEKNYKTLCALNIPQQGSADKDDGDFDYSRFGNSNEDQTMEVDDDGGDEEMDMD 300

Query: 301 DSDAEVGEGEASEFKNKVLSVLKEGDFEEKRSSKLTLQEFLYLLSLFNKAGIHFS 356
           DSDAE G+GEASEFK+KV+ VLKEGDFEEKRSSKL+LQEFLYLLSLFNKAGIHFS
Sbjct: 301 DSDAEGGDGEASEFKDKVMGVLKEGDFEEKRSSKLSLQEFLYLLSLFNKAGIHFS 355

[Close]

BLAST of MS018996 vs. NCBI nr
Match: KAG7036644.1 (Ribosomal RNA small subunit methyltransferase, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 664.1 bits (1712), Expect = 6.9e-187
Identity = 335/355 (94.37%), Postives = 347/355 (97.75%), Query Frame = 0


Query: 1   MAGGKMKREKPKAATKSTPYQGGISFHKSKGQHILKNPLLVDSIVQKSGIKSTDVILEIG 60
           MAGGKMKREKPKA  K+ PYQGGISFHKSKGQHILKNP+LVDSIVQKSGIKSTDVILEIG
Sbjct: 1   MAGGKMKREKPKALAKTAPYQGGISFHKSKGQHILKNPMLVDSIVQKSGIKSTDVILEIG 60

Query: 61  PGTGNLTKKLLECGKMVIAVELDPRMVLELQRRFQDTPYSTRLKVIQGDVLKTELPYFDI 120
           PGTGNLTKKLLECGKMVIAVELDPRMVLELQRRFQDTPYS+RLKVIQGDVLKTELPYFDI
Sbjct: 61  PGTGNLTKKLLECGKMVIAVELDPRMVLELQRRFQDTPYSSRLKVIQGDVLKTELPYFDI 120

Query: 121 CVANIPYQISSPLTFKLLNHQPSFRCAIIMFQREFAMRLVAQPGDKLYCRLTVNTQLLAR 180
           CVANIPYQISSPLTFKLLNHQPSFRCAIIMFQREFAMRLVAQPGDKLYCRLTVNTQLL+R
Sbjct: 121 CVANIPYQISSPLTFKLLNHQPSFRCAIIMFQREFAMRLVAQPGDKLYCRLTVNTQLLSR 180

Query: 181 VSHLLKVGKNNFRPPPKVDSSVVRIEPRKPRIEVKQKEWDGFLRICFNRKNKTLGSIFRQ 240
           VSHLLKVGKNNFRPPPKVDSSVVRIEPRKPRIEVKQKEWDGFLRICFNRKNKTLGSIFRQ
Sbjct: 181 VSHLLKVGKNNFRPPPKVDSSVVRIEPRKPRIEVKQKEWDGFLRICFNRKNKTLGSIFRQ 240

Query: 241 KSVLTLLEKNYKTLCALNLPQQGSANNDDGDFDYSRFGDSNEDQTMEVDDDGADEEMDMD 300
           KSVL+LLEKNYKTLCALN+PQQGSA+ DDGDFDYSRFG+ NEDQTMEVDDDG DEEMDMD
Sbjct: 241 KSVLSLLEKNYKTLCALNIPQQGSADKDDGDFDYSRFGNLNEDQTMEVDDDGGDEEMDMD 300

Query: 301 DSDAEVGEGEASEFKNKVLSVLKEGDFEEKRSSKLTLQEFLYLLSLFNKAGIHFS 356
           DSDAE G+GEASEFK+KV+ VLKEGDFEEKRSSKL+LQEFLYLLSLFNKAGIHFS
Sbjct: 301 DSDAEGGDGEASEFKDKVMGVLKEGDFEEKRSSKLSLQEFLYLLSLFNKAGIHFS 355

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BLAST of MS018996 vs. ExPASy Swiss-Prot
Match: O22268 (Ribosomal RNA small subunit methyltransferase OS=Arabidopsis thaliana OX=3702 GN=DIM1A PE=1 SV=1)

HSP 1 Score: 506.1 bits (1302), Expect = 3.1e-142
Identity = 273/362 (75.41%), Postives = 304/362 (83.98%), Query Frame = 0


Query: 1   MAGGKMKREKPKAATK--STPYQGGISFHKSKGQHILKNPLLVDSIVQKSGIKSTDVILE 60
           MAGGK+++EKPKA+ +  S  YQGGISFHKSKGQHILKNPLLVDSIVQK+GIKSTDVILE
Sbjct: 1   MAGGKIRKEKPKASNRAPSNHYQGGISFHKSKGQHILKNPLLVDSIVQKAGIKSTDVILE 60

Query: 61  IGPGTGNLTKKLLECGKMVIAVELDPRMVLELQRRFQDTPYSTRLKVIQGDVLKTELPYF 120
           IGPGTGNLTKKLLE GK VIAVELD RMVLELQRRFQ TP+S RLKVIQGDVLKTELP F
Sbjct: 61  IGPGTGNLTKKLLEAGKEVIAVELDSRMVLELQRRFQGTPFSNRLKVIQGDVLKTELPRF 120

Query: 121 DICVANIPYQISSPLTFKLLNHQPSFRCAIIMFQREFAMRLVAQPGDKLYCRLTVNTQLL 180
           DICVANIPYQISSPLTFKLL H  SFRCA+IM+QREFAMRLVAQPGD LYCRL+VNTQL 
Sbjct: 121 DICVANIPYQISSPLTFKLLFHPTSFRCAVIMYQREFAMRLVAQPGDNLYCRLSVNTQLY 180

Query: 181 ARVSHLLKVGKNNFRPPPKVDSSVVRIEPRKPRIEVKQKEWDGFLRICFNRKNKTLGSIF 240
           ARVSHLLKVGKNNFRPPPKVDSSVVRIEPR+P  +V +KEWDGFLR+CF RKNKTLGSIF
Sbjct: 181 ARVSHLLKVGKNNFRPPPKVDSSVVRIEPRRPGPQVNKKEWDGFLRVCFIRKNKTLGSIF 240

Query: 241 RQKSVLTLLEKNYKTLCAL--NLPQQGSANNDDGDFDYSRFGDSNEDQTMEVDDDGADEE 300
           +QKSVL++LEKN+KTL A+  +L   G    +    D         DQ+M ++DD  D E
Sbjct: 241 KQKSVLSMLEKNFKTLQAVLASLQNNGEPALNTTSMDLG-------DQSMGMEDD--DNE 300

Query: 301 MDMDDSDAEVGE---GEASEFKNKVLSVLKEGDFEEKRSSKLTLQEFLYLLSLFNKAGIH 356
           MD DD + + GE   GE SEFK KV++VLKEG FEEKRSSKL+ QEFLYLLSLFNK+GIH
Sbjct: 301 MDDDDMEMDEGEGDGGETSEFKEKVMNVLKEGGFEEKRSSKLSQQEFLYLLSLFNKSGIH 353

[Close]

BLAST of MS018996 vs. ExPASy Swiss-Prot
Match: Q54QK7 (Probable dimethyladenosine transferase OS=Dictyostelium discoideum OX=44689 GN=dimt1 PE=3 SV=1)

HSP 1 Score: 350.5 bits (898), Expect = 2.2e-95
Identity = 185/352 (52.56%), Postives = 238/352 (67.61%), Query Frame = 0


Query: 3   GGKMKREKPKAATKSTPYQGGISFHKSKGQHILKNPLLVDSIVQKSGIKSTDVILEIGPG 62
           G   K EK K+AT +  ++     +KS GQH+LKNPL++D+IV KS +KSTD +LEIGPG
Sbjct: 8   GVDAKVEKTKSATAARHHE--FQMNKSYGQHLLKNPLIIDAIVDKSQLKSTDTVLEIGPG 67

Query: 63  TGNLTKKLLECGKMVIAVELDPRMVLELQRRFQDTPYSTRLKVIQGDVLKTELPYFDICV 122
           TGNLT KLLE  K VIA+E+DPRM  ELQ+R   +PY+  L++I GD LK +LPYFD+CV
Sbjct: 68  TGNLTMKLLENCKKVIAIEVDPRMAAELQKRVAASPYAQHLQIILGDFLKVDLPYFDVCV 127

Query: 123 ANIPYQISSPLTFKLLNHQPSFRCAIIMFQREFAMRLVAQPGDKLYCRLTVNTQLLARVS 182
           AN+PYQISSPLTFKLL H+P FR A++MFQ+EFA+RL A+PGD LYCRL+VNTQLL++V+
Sbjct: 128 ANVPYQISSPLTFKLLAHRPIFRTAVLMFQKEFALRLGAKPGDSLYCRLSVNTQLLSKVT 187

Query: 183 HLLKVGKNNFRPPPKVDSSVVRIEPRKPRIEVKQKEWDGFLRICFNRKNKTLGSIFRQKS 242
           HL+KVGKNNF PPPKV+S+VVRIEP  P   +   EWDG +++CF+RKNKTL  IFR  S
Sbjct: 188 HLMKVGKNNFLPPPKVESAVVRIEPFNPPPPINFVEWDGLVKLCFSRKNKTLSGIFRVSS 247

Query: 243 VLTLLEKNYKTLCALNLPQQGSANNDDGDFDYSRFGDSNEDQTMEVDDDGADEEMDMDDS 302
           V+  L +NYKT CAL    +G  N                        DG+DE+M     
Sbjct: 248 VIETLNQNYKTYCAL----EGKMNT-----------------------DGSDEQM----- 307

Query: 303 DAEVGEGEASEFKNKVLSVLKEGDFEEKRSSKLTLQEFLYLLSLFNKAGIHF 355
                       K  ++  L + DF + RSSKL + +FL LL+ F++ GIHF
Sbjct: 308 ------------KELIIKTLTDNDFLDSRSSKLDINDFLKLLNKFHETGIHF 313

[Close]

BLAST of MS018996 vs. ExPASy Swiss-Prot
Match: Q2KHT8 (Probable dimethyladenosine transferase OS=Bos taurus OX=9913 GN=DIMT1 PE=2 SV=1)

HSP 1 Score: 336.3 bits (861), Expect = 4.3e-91
Identity = 177/354 (50.00%), Postives = 232/354 (65.54%), Query Frame = 0


Query: 2   AGGKMKREKPKAATKSTPYQGGISFHKSKGQHILKNPLLVDSIVQKSGIKSTDVILEIGP 61
           +G + +R++ +   KS    GG+ F+   GQHILKNPL+V+SI+ K+ ++ TDV+LE+GP
Sbjct: 9   SGRRRERQQQRGQLKSA---GGLMFNTGIGQHILKNPLIVNSIIDKAALRPTDVVLEVGP 68

Query: 62  GTGNLTKKLLECGKMVIAVELDPRMVLELQRRFQDTPYSTRLKVIQGDVLKTELPYFDIC 121
           GTGN+T KLLE  K VIA ELDPR+V EL +R Q TP +++L+V+ GDVLK +LP+FD C
Sbjct: 69  GTGNMTVKLLEKAKKVIACELDPRLVAELHKRVQGTPLASKLQVMVGDVLKADLPFFDAC 128

Query: 122 VANIPYQISSPLTFKLLNHQPSFRCAIIMFQREFAMRLVAQPGDKLYCRLTVNTQLLARV 181
           VAN+PYQISSP  FKLL H+P FRCA++MFQREFA+RLVA+PGDKLYCRL++NTQLLARV
Sbjct: 129 VANLPYQISSPFVFKLLLHRPFFRCAVLMFQREFALRLVAKPGDKLYCRLSINTQLLARV 188

Query: 182 SHLLKVGKNNFRPPPKVDSSVVRIEPRKPRIEVKQKEWDGFLRICFNRKNKTLGSIFRQK 241
            HL+KVGKNNFRPPPKV+SSVVRIEP+ P   +  +EWDG +RI F RKNKTL + F+  
Sbjct: 189 DHLMKVGKNNFRPPPKVESSVVRIEPKNPPPPINFQEWDGLVRITFVRKNKTLSAAFKSS 248

Query: 242 SVLTLLEKNYKTLCALNLPQQGSANNDDGDFDYSRFGDSNEDQTMEVDDDGADEEMDMDD 301
           +V  LLEKNY+  C        S +N     D+S                          
Sbjct: 249 AVQQLLEKNYRIHC--------SVHNIIIPEDFS-------------------------- 308

Query: 302 SDAEVGEGEASEFKNKVLSVLKEGDFEEKRSSKLTLQEFLYLLSLFNKAGIHFS 356
                         +K+  +L    F +KR+  + + +F+ LL  FN  GIHFS
Sbjct: 309 ------------IADKIQQILTSTGFSDKRARSMDIDDFIRLLHGFNAEGIHFS 313

[Close]

BLAST of MS018996 vs. ExPASy Swiss-Prot
Match: Q9UNQ2 (Probable dimethyladenosine transferase OS=Homo sapiens OX=9606 GN=DIMT1 PE=1 SV=1)

HSP 1 Score: 336.3 bits (861), Expect = 4.3e-91
Identity = 177/353 (50.14%), Postives = 231/353 (65.44%), Query Frame = 0


Query: 3   GGKMKREKPKAATKSTPYQGGISFHKSKGQHILKNPLLVDSIVQKSGIKSTDVILEIGPG 62
           G +  R++ +   KS    GG+ F+   GQHILKNPL+++SI+ K+ ++ TDV+LE+GPG
Sbjct: 10  GRRRGRQEQRRELKSA---GGLMFNTGIGQHILKNPLIINSIIDKAALRPTDVVLEVGPG 69

Query: 63  TGNLTKKLLECGKMVIAVELDPRMVLELQRRFQDTPYSTRLKVIQGDVLKTELPYFDICV 122
           TGN+T KLLE  K V+A ELDPR+V EL +R Q TP +++L+V+ GDVLKT+LP+FD CV
Sbjct: 70  TGNMTVKLLEKAKKVVACELDPRLVAELHKRVQGTPVASKLQVLVGDVLKTDLPFFDTCV 129

Query: 123 ANIPYQISSPLTFKLLNHQPSFRCAIIMFQREFAMRLVAQPGDKLYCRLTVNTQLLARVS 182
           AN+PYQISSP  FKLL H+P FRCAI+MFQREFA+RLVA+PGDKLYCRL++NTQLLARV 
Sbjct: 130 ANLPYQISSPFVFKLLLHRPFFRCAILMFQREFALRLVAKPGDKLYCRLSINTQLLARVD 189

Query: 183 HLLKVGKNNFRPPPKVDSSVVRIEPRKPRIEVKQKEWDGFLRICFNRKNKTLGSIFRQKS 242
           HL+KVGKNNFRPPPKV+SSVVRIEP+ P   +  +EWDG +RI F RKNKTL + F+  +
Sbjct: 190 HLMKVGKNNFRPPPKVESSVVRIEPKNPPPPINFQEWDGLVRITFVRKNKTLSAAFKSSA 249

Query: 243 VLTLLEKNYKTLCALNLPQQGSANNDDGDFDYSRFGDSNEDQTMEVDDDGADEEMDMDDS 302
           V  LLEKNY+  C        S +N     D+S                           
Sbjct: 250 VQQLLEKNYRIHC--------SVHNIIIPEDFS--------------------------- 309

Query: 303 DAEVGEGEASEFKNKVLSVLKEGDFEEKRSSKLTLQEFLYLLSLFNKAGIHFS 356
                        +K+  +L    F +KR+  + + +F+ LL  FN  GIHFS
Sbjct: 310 -----------IADKIQQILTSTGFSDKRARSMDIDDFIRLLHGFNAEGIHFS 313

[Close]

BLAST of MS018996 vs. ExPASy Swiss-Prot
Match: Q9D0D4 (Probable dimethyladenosine transferase OS=Mus musculus OX=10090 GN=Dimt1 PE=2 SV=1)

HSP 1 Score: 335.9 bits (860), Expect = 5.6e-91
Identity = 171/334 (51.20%), Postives = 223/334 (66.77%), Query Frame = 0


Query: 22  GGISFHKSKGQHILKNPLLVDSIVQKSGIKSTDVILEIGPGTGNLTKKLLECGKMVIAVE 81
           GG+ F+   GQHILKNPL+V+SI+ K+ ++ TDV+LE+GPGTGN+T KLLE  K V+A E
Sbjct: 26  GGLMFNTGIGQHILKNPLIVNSIIDKAALRPTDVVLEVGPGTGNMTVKLLEKAKKVVACE 85

Query: 82  LDPRMVLELQRRFQDTPYSTRLKVIQGDVLKTELPYFDICVANIPYQISSPLTFKLLNHQ 141
           LDPR+V EL +R Q TP +++L+V+ GDVLK++LP+FD CVAN+PYQISSP  FKLL H+
Sbjct: 86  LDPRLVAELHKRVQGTPLASKLQVLVGDVLKSDLPFFDACVANLPYQISSPFVFKLLLHR 145

Query: 142 PSFRCAIIMFQREFAMRLVAQPGDKLYCRLTVNTQLLARVSHLLKVGKNNFRPPPKVDSS 201
           P FRCAI+MFQREFA+RLVA+PGDKLYCRL++NTQLLARV HL+KVGKNNFRPPPKV+SS
Sbjct: 146 PFFRCAILMFQREFALRLVAKPGDKLYCRLSINTQLLARVDHLMKVGKNNFRPPPKVESS 205

Query: 202 VVRIEPRKPRIEVKQKEWDGFLRICFNRKNKTLGSIFRQKSVLTLLEKNYKTLCALNLPQ 261
           VVRIEP+ P   +  +EWDG +RI F RKNKTL + F+  +V  LLEKNY+  C++    
Sbjct: 206 VVRIEPKNPPPPINFQEWDGLVRITFVRKNKTLSAAFKSSAVQQLLEKNYRIHCSV---- 265

Query: 262 QGSANNDDGDFDYSRFGDSNEDQTMEVDDDGADEEMDMDDSDAEVGEGEASEFKNKVLSV 321
                                 Q   + +D                        +K+  +
Sbjct: 266 ----------------------QNTVIPED--------------------FSIADKIQQI 313

Query: 322 LKEGDFEEKRSSKLTLQEFLYLLSLFNKAGIHFS 356
           L    F +KR+  + + +F+ LL  FN  GIHFS
Sbjct: 326 LTSTGFSDKRARSMDIDDFIRLLHGFNAEGIHFS 313

[Close]

BLAST of MS018996 vs. ExPASy TrEMBL
Match: A0A6J1DPX6 (rRNA adenine N(6)-methyltransferase OS=Momordica charantia OX=3673 GN=LOC111022457 PE=3 SV=1)

HSP 1 Score: 696.4 bits (1796), Expect = 6.0e-197
Identity = 355/355 (100.00%), Postives = 355/355 (100.00%), Query Frame = 0


Query: 1   MAGGKMKREKPKAATKSTPYQGGISFHKSKGQHILKNPLLVDSIVQKSGIKSTDVILEIG 60
           MAGGKMKREKPKAATKSTPYQGGISFHKSKGQHILKNPLLVDSIVQKSGIKSTDVILEIG
Sbjct: 1   MAGGKMKREKPKAATKSTPYQGGISFHKSKGQHILKNPLLVDSIVQKSGIKSTDVILEIG 60

Query: 61  PGTGNLTKKLLECGKMVIAVELDPRMVLELQRRFQDTPYSTRLKVIQGDVLKTELPYFDI 120
           PGTGNLTKKLLECGKMVIAVELDPRMVLELQRRFQDTPYSTRLKVIQGDVLKTELPYFDI
Sbjct: 61  PGTGNLTKKLLECGKMVIAVELDPRMVLELQRRFQDTPYSTRLKVIQGDVLKTELPYFDI 120

Query: 121 CVANIPYQISSPLTFKLLNHQPSFRCAIIMFQREFAMRLVAQPGDKLYCRLTVNTQLLAR 180
           CVANIPYQISSPLTFKLLNHQPSFRCAIIMFQREFAMRLVAQPGDKLYCRLTVNTQLLAR
Sbjct: 121 CVANIPYQISSPLTFKLLNHQPSFRCAIIMFQREFAMRLVAQPGDKLYCRLTVNTQLLAR 180

Query: 181 VSHLLKVGKNNFRPPPKVDSSVVRIEPRKPRIEVKQKEWDGFLRICFNRKNKTLGSIFRQ 240
           VSHLLKVGKNNFRPPPKVDSSVVRIEPRKPRIEVKQKEWDGFLRICFNRKNKTLGSIFRQ
Sbjct: 181 VSHLLKVGKNNFRPPPKVDSSVVRIEPRKPRIEVKQKEWDGFLRICFNRKNKTLGSIFRQ 240

Query: 241 KSVLTLLEKNYKTLCALNLPQQGSANNDDGDFDYSRFGDSNEDQTMEVDDDGADEEMDMD 300
           KSVLTLLEKNYKTLCALNLPQQGSANNDDGDFDYSRFGDSNEDQTMEVDDDGADEEMDMD
Sbjct: 241 KSVLTLLEKNYKTLCALNLPQQGSANNDDGDFDYSRFGDSNEDQTMEVDDDGADEEMDMD 300

Query: 301 DSDAEVGEGEASEFKNKVLSVLKEGDFEEKRSSKLTLQEFLYLLSLFNKAGIHFS 356
           DSDAEVGEGEASEFKNKVLSVLKEGDFEEKRSSKLTLQEFLYLLSLFNKAGIHFS
Sbjct: 301 DSDAEVGEGEASEFKNKVLSVLKEGDFEEKRSSKLTLQEFLYLLSLFNKAGIHFS 355

[Close]

BLAST of MS018996 vs. ExPASy TrEMBL
Match: A0A6J1K9W6 (rRNA adenine N(6)-methyltransferase OS=Cucurbita maxima OX=3661 GN=LOC111492981 PE=3 SV=1)

HSP 1 Score: 667.2 bits (1720), Expect = 3.9e-188
Identity = 337/355 (94.93%), Postives = 349/355 (98.31%), Query Frame = 0


Query: 1   MAGGKMKREKPKAATKSTPYQGGISFHKSKGQHILKNPLLVDSIVQKSGIKSTDVILEIG 60
           MAGGKMKREKPKA+ K+ PYQGGISFHKSKGQHILKNP+LVDSIVQKSGIKSTDVILEIG
Sbjct: 1   MAGGKMKREKPKASAKTAPYQGGISFHKSKGQHILKNPMLVDSIVQKSGIKSTDVILEIG 60

Query: 61  PGTGNLTKKLLECGKMVIAVELDPRMVLELQRRFQDTPYSTRLKVIQGDVLKTELPYFDI 120
           PGTGNLTKKLLECGKMVIAVELDPRMVLELQRRFQDTPYS+RLKVIQGDVLKTELPYFDI
Sbjct: 61  PGTGNLTKKLLECGKMVIAVELDPRMVLELQRRFQDTPYSSRLKVIQGDVLKTELPYFDI 120

Query: 121 CVANIPYQISSPLTFKLLNHQPSFRCAIIMFQREFAMRLVAQPGDKLYCRLTVNTQLLAR 180
           CVANIPYQISSPLTFKLLNHQPSFRCAIIMFQREFAMRLVAQPGDKLYCRLTVNTQLL+R
Sbjct: 121 CVANIPYQISSPLTFKLLNHQPSFRCAIIMFQREFAMRLVAQPGDKLYCRLTVNTQLLSR 180

Query: 181 VSHLLKVGKNNFRPPPKVDSSVVRIEPRKPRIEVKQKEWDGFLRICFNRKNKTLGSIFRQ 240
           VSHLLKVGKNNFRPPPKVDSSVVRIEPRKPRIEVKQKEWDGFLRICFNRKNKTLGSIFRQ
Sbjct: 181 VSHLLKVGKNNFRPPPKVDSSVVRIEPRKPRIEVKQKEWDGFLRICFNRKNKTLGSIFRQ 240

Query: 241 KSVLTLLEKNYKTLCALNLPQQGSANNDDGDFDYSRFGDSNEDQTMEVDDDGADEEMDMD 300
           KSVL+LLEKNYKTLCALN+PQQGSA+ DDGDFDYSRFG+SNEDQTMEVDDDGADEEMDMD
Sbjct: 241 KSVLSLLEKNYKTLCALNIPQQGSADKDDGDFDYSRFGNSNEDQTMEVDDDGADEEMDMD 300

Query: 301 DSDAEVGEGEASEFKNKVLSVLKEGDFEEKRSSKLTLQEFLYLLSLFNKAGIHFS 356
            SDAE GEGEASEFK+KV+ VLKEGDFEEKRSSKL+LQEFLYLLSLFNKAGIHFS
Sbjct: 301 GSDAEGGEGEASEFKDKVMGVLKEGDFEEKRSSKLSLQEFLYLLSLFNKAGIHFS 355

[Close]

BLAST of MS018996 vs. ExPASy TrEMBL
Match: A0A6J1GBX4 (rRNA adenine N(6)-methyltransferase OS=Cucurbita moschata OX=3662 GN=LOC111452763 PE=3 SV=1)

HSP 1 Score: 663.7 bits (1711), Expect = 4.3e-187
Identity = 334/355 (94.08%), Postives = 348/355 (98.03%), Query Frame = 0


Query: 1   MAGGKMKREKPKAATKSTPYQGGISFHKSKGQHILKNPLLVDSIVQKSGIKSTDVILEIG 60
           MAGGKMKREKPKA+ K+ PYQGGISFHKSKGQHILKNP+LVDSIVQKSGIKSTDVILEIG
Sbjct: 1   MAGGKMKREKPKASAKTAPYQGGISFHKSKGQHILKNPMLVDSIVQKSGIKSTDVILEIG 60

Query: 61  PGTGNLTKKLLECGKMVIAVELDPRMVLELQRRFQDTPYSTRLKVIQGDVLKTELPYFDI 120
           PGTGNLTKKLLECGKMVIAVELDPRMVLELQRRFQDTPY++RLKVIQGDVLKTELPYFDI
Sbjct: 61  PGTGNLTKKLLECGKMVIAVELDPRMVLELQRRFQDTPYASRLKVIQGDVLKTELPYFDI 120

Query: 121 CVANIPYQISSPLTFKLLNHQPSFRCAIIMFQREFAMRLVAQPGDKLYCRLTVNTQLLAR 180
           CVANIPYQISSPLTFKLLNHQPSFRCAIIMFQREFAMRLVAQPGDKLYCRLTVNTQLL+R
Sbjct: 121 CVANIPYQISSPLTFKLLNHQPSFRCAIIMFQREFAMRLVAQPGDKLYCRLTVNTQLLSR 180

Query: 181 VSHLLKVGKNNFRPPPKVDSSVVRIEPRKPRIEVKQKEWDGFLRICFNRKNKTLGSIFRQ 240
           VSHLLKVGKNNFRPPPKVDSSVVRIEPRKPRIEVKQKEWDGFLRICFNRKNKTLGSIFRQ
Sbjct: 181 VSHLLKVGKNNFRPPPKVDSSVVRIEPRKPRIEVKQKEWDGFLRICFNRKNKTLGSIFRQ 240

Query: 241 KSVLTLLEKNYKTLCALNLPQQGSANNDDGDFDYSRFGDSNEDQTMEVDDDGADEEMDMD 300
           KSVL+LLEKNYKTLCALN+PQQGSA+ DDGDFDYSRFG+ NEDQTMEVDDDG DEEMDMD
Sbjct: 241 KSVLSLLEKNYKTLCALNIPQQGSADKDDGDFDYSRFGNLNEDQTMEVDDDGGDEEMDMD 300

Query: 301 DSDAEVGEGEASEFKNKVLSVLKEGDFEEKRSSKLTLQEFLYLLSLFNKAGIHFS 356
           DSDAE G+GEASEFK+KV+ VLKEGDFEEKRSSKL+LQEFLYLLSLFNKAGIHFS
Sbjct: 301 DSDAEGGDGEASEFKDKVMGVLKEGDFEEKRSSKLSLQEFLYLLSLFNKAGIHFS 355

[Close]

BLAST of MS018996 vs. ExPASy TrEMBL
Match: A0A5A7T0N9 (rRNA adenine N(6)-methyltransferase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold1228G00080 PE=3 SV=1)

HSP 1 Score: 631.7 bits (1628), Expect = 1.8e-177
Identity = 328/356 (92.13%), Postives = 339/356 (95.22%), Query Frame = 0


Query: 1   MAGGKMKREKPKAATK-STPYQGGISFHKSKGQHILKNPLLVDSIVQKSGIKSTDVILEI 60
           MAGGK+KREKPKAA K +TPYQGGISFHKSKGQHILKNPLLVDSIVQKSGIKSTDVILEI
Sbjct: 1   MAGGKIKREKPKAAAKAATPYQGGISFHKSKGQHILKNPLLVDSIVQKSGIKSTDVILEI 60

Query: 61  GPGTGNLTKKLLECGKMVIAVELDPRMVLELQRRFQDTPYSTRLKVIQGDVLKTELPYFD 120
           GPGTGNLTKKLLECGKMVIAVELDPRMVLELQRRFQDTPYS+RLKVIQGDVLKTELPYFD
Sbjct: 61  GPGTGNLTKKLLECGKMVIAVELDPRMVLELQRRFQDTPYSSRLKVIQGDVLKTELPYFD 120

Query: 121 ICVANIPYQISSPLTFKLLNHQPSFRCAIIMFQREFAMRLVAQPGDKLYCRLTVNTQLLA 180
           ICVANIPYQISSPLTFKLLNHQP+FRCAIIMFQREFAMRLVAQPGDKLYCRLTVNTQLLA
Sbjct: 121 ICVANIPYQISSPLTFKLLNHQPAFRCAIIMFQREFAMRLVAQPGDKLYCRLTVNTQLLA 180

Query: 181 RVSHLLKVGKNNFRPPPKVDSSVVRIEPRKPRIEVKQKEWDGFLRICFNRKNKTLGSIFR 240
           RVSHLLKVGKNNFRPPPKVDSSVVRIEPRKPRIEVKQKEWDGFLRICFNRKNKTLGSIFR
Sbjct: 181 RVSHLLKVGKNNFRPPPKVDSSVVRIEPRKPRIEVKQKEWDGFLRICFNRKNKTLGSIFR 240

Query: 241 QKSVLTLLEKNYKTLCALNLPQQGSANNDDGDFDYSRFGDSNEDQTMEVDDDGADEEMDM 300
           QKSVL+LLEKNYKTLC+LN+ QQGSA NDD  FDY     SNEDQ+MEVD+DG DEEMDM
Sbjct: 241 QKSVLSLLEKNYKTLCSLNILQQGSAGNDDSAFDY-----SNEDQSMEVDEDGDDEEMDM 300

Query: 301 DDSDAEVGEGEASEFKNKVLSVLKEGDFEEKRSSKLTLQEFLYLLSLFNKAGIHFS 356
           +D DAE  EGEASEFK KV+ VLKEGDFEEKRSSKLTLQEFLYLLSLFNKAGIHFS
Sbjct: 301 EDGDAE--EGEASEFKGKVMGVLKEGDFEEKRSSKLTLQEFLYLLSLFNKAGIHFS 349

[Close]

BLAST of MS018996 vs. ExPASy TrEMBL
Match: A0A1S3B8X1 (rRNA adenine N(6)-methyltransferase OS=Cucumis melo OX=3656 GN=LOC103487290 PE=3 SV=1)

HSP 1 Score: 631.7 bits (1628), Expect = 1.8e-177
Identity = 328/356 (92.13%), Postives = 339/356 (95.22%), Query Frame = 0


Query: 1   MAGGKMKREKPKAATK-STPYQGGISFHKSKGQHILKNPLLVDSIVQKSGIKSTDVILEI 60
           MAGGK+KREKPKAA K +TPYQGGISFHKSKGQHILKNPLLVDSIVQKSGIKSTDVILEI
Sbjct: 1   MAGGKIKREKPKAAAKAATPYQGGISFHKSKGQHILKNPLLVDSIVQKSGIKSTDVILEI 60

Query: 61  GPGTGNLTKKLLECGKMVIAVELDPRMVLELQRRFQDTPYSTRLKVIQGDVLKTELPYFD 120
           GPGTGNLTKKLLECGKMVIAVELDPRMVLELQRRFQDTPYS+RLKVIQGDVLKTELPYFD
Sbjct: 61  GPGTGNLTKKLLECGKMVIAVELDPRMVLELQRRFQDTPYSSRLKVIQGDVLKTELPYFD 120

Query: 121 ICVANIPYQISSPLTFKLLNHQPSFRCAIIMFQREFAMRLVAQPGDKLYCRLTVNTQLLA 180
           ICVANIPYQISSPLTFKLLNHQP+FRCAIIMFQREFAMRLVAQPGDKLYCRLTVNTQLLA
Sbjct: 121 ICVANIPYQISSPLTFKLLNHQPAFRCAIIMFQREFAMRLVAQPGDKLYCRLTVNTQLLA 180

Query: 181 RVSHLLKVGKNNFRPPPKVDSSVVRIEPRKPRIEVKQKEWDGFLRICFNRKNKTLGSIFR 240
           RVSHLLKVGKNNFRPPPKVDSSVVRIEPRKPRIEVKQKEWDGFLRICFNRKNKTLGSIFR
Sbjct: 181 RVSHLLKVGKNNFRPPPKVDSSVVRIEPRKPRIEVKQKEWDGFLRICFNRKNKTLGSIFR 240

Query: 241 QKSVLTLLEKNYKTLCALNLPQQGSANNDDGDFDYSRFGDSNEDQTMEVDDDGADEEMDM 300
           QKSVL+LLEKNYKTLC+LN+ QQGSA NDD  FDY     SNEDQ+MEVD+DG DEEMDM
Sbjct: 241 QKSVLSLLEKNYKTLCSLNILQQGSAGNDDSAFDY-----SNEDQSMEVDEDGDDEEMDM 300

Query: 301 DDSDAEVGEGEASEFKNKVLSVLKEGDFEEKRSSKLTLQEFLYLLSLFNKAGIHFS 356
           +D DAE  EGEASEFK KV+ VLKEGDFEEKRSSKLTLQEFLYLLSLFNKAGIHFS
Sbjct: 301 EDGDAE--EGEASEFKGKVMGVLKEGDFEEKRSSKLTLQEFLYLLSLFNKAGIHFS 349

[Close]

BLAST of MS018996 vs. TAIR 10
Match: AT2G47420.1 (Ribosomal RNA adenine dimethylase family protein )

HSP 1 Score: 506.1 bits (1302), Expect = 2.2e-143
Identity = 273/362 (75.41%), Postives = 304/362 (83.98%), Query Frame = 0


Query: 1   MAGGKMKREKPKAATK--STPYQGGISFHKSKGQHILKNPLLVDSIVQKSGIKSTDVILE 60
           MAGGK+++EKPKA+ +  S  YQGGISFHKSKGQHILKNPLLVDSIVQK+GIKSTDVILE
Sbjct: 1   MAGGKIRKEKPKASNRAPSNHYQGGISFHKSKGQHILKNPLLVDSIVQKAGIKSTDVILE 60

Query: 61  IGPGTGNLTKKLLECGKMVIAVELDPRMVLELQRRFQDTPYSTRLKVIQGDVLKTELPYF 120
           IGPGTGNLTKKLLE GK VIAVELD RMVLELQRRFQ TP+S RLKVIQGDVLKTELP F
Sbjct: 61  IGPGTGNLTKKLLEAGKEVIAVELDSRMVLELQRRFQGTPFSNRLKVIQGDVLKTELPRF 120

Query: 121 DICVANIPYQISSPLTFKLLNHQPSFRCAIIMFQREFAMRLVAQPGDKLYCRLTVNTQLL 180
           DICVANIPYQISSPLTFKLL H  SFRCA+IM+QREFAMRLVAQPGD LYCRL+VNTQL 
Sbjct: 121 DICVANIPYQISSPLTFKLLFHPTSFRCAVIMYQREFAMRLVAQPGDNLYCRLSVNTQLY 180

Query: 181 ARVSHLLKVGKNNFRPPPKVDSSVVRIEPRKPRIEVKQKEWDGFLRICFNRKNKTLGSIF 240
           ARVSHLLKVGKNNFRPPPKVDSSVVRIEPR+P  +V +KEWDGFLR+CF RKNKTLGSIF
Sbjct: 181 ARVSHLLKVGKNNFRPPPKVDSSVVRIEPRRPGPQVNKKEWDGFLRVCFIRKNKTLGSIF 240

Query: 241 RQKSVLTLLEKNYKTLCAL--NLPQQGSANNDDGDFDYSRFGDSNEDQTMEVDDDGADEE 300
           +QKSVL++LEKN+KTL A+  +L   G    +    D         DQ+M ++DD  D E
Sbjct: 241 KQKSVLSMLEKNFKTLQAVLASLQNNGEPALNTTSMDLG-------DQSMGMEDD--DNE 300

Query: 301 MDMDDSDAEVGE---GEASEFKNKVLSVLKEGDFEEKRSSKLTLQEFLYLLSLFNKAGIH 356
           MD DD + + GE   GE SEFK KV++VLKEG FEEKRSSKL+ QEFLYLLSLFNK+GIH
Sbjct: 301 MDDDDMEMDEGEGDGGETSEFKEKVMNVLKEGGFEEKRSSKLSQQEFLYLLSLFNKSGIH 353

[Close]

BLAST of MS018996 vs. TAIR 10
Match: AT5G66360.2 (Ribosomal RNA adenine dimethylase family protein )

HSP 1 Score: 275.8 bits (704), Expect = 4.9e-74
Identity = 162/335 (48.36%), Postives = 217/335 (64.78%), Query Frame = 0


Query: 23  GISFHKSKGQHILKNPLLVDSIVQKSGIKSTDVILEIGPGTGNLTKKLLECGKMVIAVEL 82
           G+   KSKGQH+L N  ++DSIV+ S I+ TD +LEIGPGTGNLT KLLE  + V+AVEL
Sbjct: 60  GLFLCKSKGQHLLTNTRILDSIVRSSDIRPTDTVLEIGPGTGNLTMKLLEAAQNVVAVEL 119

Query: 83  DPRMVLELQRRFQDTPYSTRLKVIQGDVLKTELPYFDICVANIPYQISSPLTFKLLNHQP 142
           D RMV  L++R  D  ++ +L +IQ DVLKT+ P+FD+ VANIPY ISSPL  KL+    
Sbjct: 120 DKRMVEILRKRVSDHGFADKLTIIQKDVLKTDFPHFDLVVANIPYNISSPLVAKLVYGSN 179

Query: 143 SFRCAIIMFQREFAMRLVAQPGDKLYCRLTVNTQLLARVSHLLKVGKNNFRPPPKVDSSV 202
           +FR A ++ Q+EF+ RL+A PGD  + RL VN +L+A V  ++ V K  F PPPKVDSSV
Sbjct: 180 TFRSATLLLQKEFSRRLLANPGDSDFNRLAVNVKLVADVKFVMDVSKREFVPPPKVDSSV 239

Query: 203 VRIEPRKPRIEVKQKEWDGFLRICFNRKNKTLGSIFRQKSVLTLLEKNYKTLCALNLPQQ 262
           +RI P++   +V  +EW  F R CF +KNKTLGS+FRQK       K    L +L+  + 
Sbjct: 240 IRITPKEIIPDVNVQEWLAFTRTCFGKKNKTLGSMFRQK-------KKVMELQSLSAGRH 299

Query: 263 GS---ANNDDGDFDYSRFGDSNEDQTMEVDDDGADEEMDMDDSDAEVGEGEASEFKNKVL 322
           GS     N  G       GDS+ D    V++DG D+ + +D         +AS FK +V+
Sbjct: 300 GSNVEVMNQTG-------GDSDSD----VEEDGKDDLLCLDT--------DASMFKERVI 359

Query: 323 SVLKEGDFEEKRSSKLTLQEFLYLLSLFNKAGIHF 355
            +L+   FEEKR SKL+ +E L+LLSLFN+AGI F
Sbjct: 360 EILRTNGFEEKRPSKLSHRELLHLLSLFNQAGIFF 368

[Close]

BLAST of MS018996 vs. TAIR 10
Match: AT5G66360.1 (Ribosomal RNA adenine dimethylase family protein )

HSP 1 Score: 231.5 bits (589), Expect = 1.1e-60
Identity = 147/335 (43.88%), Postives = 198/335 (59.10%), Query Frame = 0


Query: 23  GISFHKSKGQHILKNPLLVDSIVQKSGIKSTDVILEIGPGTGNLTKKLLECGKMVIAVEL 82
           G+   KSKGQH+L N  ++DSIV+ S I+ TD +LEIGPGTGNLT KLLE  + V+AVEL
Sbjct: 60  GLFLCKSKGQHLLTNTRILDSIVRSSDIRPTDTVLEIGPGTGNLTMKLLEAAQNVVAVEL 119

Query: 83  DPRMVLELQRRFQDTPYSTRLKVIQGDVLKTELPYFDICVANIPYQISSPLTFKLLNHQP 142
           D RMV  L++R  D  ++ +L +IQ DVLKT+ P+FD+ VANIPY ISSPL  KL+    
Sbjct: 120 DKRMVEILRKRVSDHGFADKLTIIQKDVLKTDFPHFDLVVANIPYNISSPLVAKLVYGSN 179

Query: 143 SFRCAIIMFQREFAMRLVAQPGDKLYCRLTVNTQLLARVSHLLKVGKNNFRPPPKVDSSV 202
           +FR A ++ Q+EF+ RL+A PGD  + RL VN                            
Sbjct: 180 TFRSATLLLQKEFSRRLLANPGDSDFNRLAVN---------------------------- 239

Query: 203 VRIEPRKPRIEVKQKEWDGFLRICFNRKNKTLGSIFRQKSVLTLLEKNYKTLCALNLPQQ 262
           V+I P++   +V  +EW  F R CF +KNKTLGS+FRQK       K    L +L+  + 
Sbjct: 240 VKITPKEIIPDVNVQEWLAFTRTCFGKKNKTLGSMFRQK-------KKVMELQSLSAGRH 299

Query: 263 GS---ANNDDGDFDYSRFGDSNEDQTMEVDDDGADEEMDMDDSDAEVGEGEASEFKNKVL 322
           GS     N  G       GDS+ D    V++DG D+ + +D         +AS FK +V+
Sbjct: 300 GSNVEVMNQTG-------GDSDSD----VEEDGKDDLLCLDT--------DASMFKERVI 340

Query: 323 SVLKEGDFEEKRSSKLTLQEFLYLLSLFNKAGIHF 355
            +L+   FEEKR SKL+ +E L+LLSLFN+AGI F
Sbjct: 360 EILRTNGFEEKRPSKLSHRELLHLLSLFNQAGIFF 340

[Close]

BLAST of MS018996 vs. TAIR 10
Match: AT1G01860.1 (Ribosomal RNA adenine dimethylase family protein )

HSP 1 Score: 96.3 bits (238), Expect = 5.3e-20
Identity = 78/268 (29.10%), Postives = 122/268 (45.52%), Query Frame = 0


Query: 4   GKMKREKPKAATKSTPYQGGISFHKSKGQHILKNPLLVDSIVQKSGIKSTDVILEIGPGT 63
           GK   +   +  KS   +G     KS GQH + N  + D +   + +K  D +LEIGPGT
Sbjct: 50  GKSSPDDYHSTLKSLNSRGRFP-RKSLGQHYMLNSDINDQLASAADVKEGDFVLEIGPGT 109

Query: 64  GNLTKKLLECGKMVIAVELDPRMVLELQRRFQDTPYSTRLKVIQGDVLKTELPYFDI--- 123
           G+LT  L+  G  V+A+E DP MV  +  RF     S + KV+Q D +K  +    +   
Sbjct: 110 GSLTNVLINLGATVLAIEKDPHMVDLVSERFAG---SDKFKVLQEDFVKCHIRSHMLSIL 169

Query: 124 --------------CVANIPYQISSPLTFKLLNHQPSFRCAIIMFQREFAMRLVAQPGDK 183
                          V+N+P+ IS+ +   LL     F   +++ Q E A+RLV +P  +
Sbjct: 170 ETRRLSHPDSALAKVVSNLPFNISTDVVKLLLPMGDIFSKVVLLLQDEAALRLV-EPALR 229

Query: 184 L--YCRLTVNTQLLARVSHLLKVGKNNFRPPPKVDSSVVRIEPRKPR---IEVKQKEWDG 243
              Y  + +     +   +  +V + NF P PKVD++VV  + + PR        K +  
Sbjct: 230 TSEYRPINILINFYSEPEYNFRVPRENFFPQPKVDAAVVTFKLKHPRDYPDVSSTKNFFS 289

Query: 244 FLRICFNRKNKTLGSIFRQKSVLTLLEK 250
            +   FN K K L    +  S    +EK
Sbjct: 290 LVNSAFNGKRKMLRKSLQHISSSPDIEK 312

The following BLAST results are available for this feature:

BLAST of MS018996 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022155324.1	1.2e-196	100.00	ribosomal RNA small subunit methyltransferase [Momordica charantia]	[more]
XP_023525787.1	3.6e-188	94.93	ribosomal RNA small subunit methyltransferase [Cucurbita pepo subsp. pepo]	[more]
XP_022998306.1	8.1e-188	94.93	ribosomal RNA small subunit methyltransferase [Cucurbita maxima]	[more]
KAG6606941.1	1.4e-187	94.65	Ribosomal RNA small subunit methyltransferase, partial [Cucurbita argyrosperma s...	[more]
KAG7036644.1	6.9e-187	94.37	Ribosomal RNA small subunit methyltransferase, partial [Cucurbita argyrosperma s...	[more]

BLAST of MS018996 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
O22268	3.1e-142	75.41	Ribosomal RNA small subunit methyltransferase OS=Arabidopsis thaliana OX=3702 GN...	[more]
Q54QK7	2.2e-95	52.56	Probable dimethyladenosine transferase OS=Dictyostelium discoideum OX=44689 GN=d...	[more]
Q2KHT8	4.3e-91	50.00	Probable dimethyladenosine transferase OS=Bos taurus OX=9913 GN=DIMT1 PE=2 SV=1	[more]
Q9UNQ2	4.3e-91	50.14	Probable dimethyladenosine transferase OS=Homo sapiens OX=9606 GN=DIMT1 PE=1 SV=...	[more]
Q9D0D4	5.6e-91	51.20	Probable dimethyladenosine transferase OS=Mus musculus OX=10090 GN=Dimt1 PE=2 SV...	[more]

BLAST of MS018996 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1DPX6	6.0e-197	100.00	rRNA adenine N(6)-methyltransferase OS=Momordica charantia OX=3673 GN=LOC1110224...	[more]
A0A6J1K9W6	3.9e-188	94.93	rRNA adenine N(6)-methyltransferase OS=Cucurbita maxima OX=3661 GN=LOC111492981 ...	[more]
A0A6J1GBX4	4.3e-187	94.08	rRNA adenine N(6)-methyltransferase OS=Cucurbita moschata OX=3662 GN=LOC11145276...	[more]
A0A5A7T0N9	1.8e-177	92.13	rRNA adenine N(6)-methyltransferase OS=Cucumis melo var. makuwa OX=1194695 GN=E5...	[more]
A0A1S3B8X1	1.8e-177	92.13	rRNA adenine N(6)-methyltransferase OS=Cucumis melo OX=3656 GN=LOC103487290 PE=3...	[more]

BLAST of MS018996 vs. TAIR 10


Match Name	E-value	Identity	Description
AT2G47420.1	2.2e-143	75.41	Ribosomal RNA adenine dimethylase family protein	[more]
AT5G66360.2	4.9e-74	48.36	Ribosomal RNA adenine dimethylase family protein	[more]
AT5G66360.1	1.1e-60	43.88	Ribosomal RNA adenine dimethylase family protein	[more]
AT1G01860.1	5.3e-20	29.10	Ribosomal RNA adenine dimethylase family protein	[more]

InterPro

Analysis Name: InterPro Annotations of Bitter gourd (TR) v1
Date Performed: 2021-10-25

Position :

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IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR020598	Ribosomal RNA adenine methylase transferase, N-terminal	SMART	SM00650	rADcneu6	coord: 40..209 e-value: 1.3E-86 score: 303.7
None	No IPR available	GENE3D	3.40.50.150	Vaccinia Virus protein VP39	coord: 26..210 e-value: 1.9E-67 score: 228.5
None	No IPR available	GENE3D	1.10.8.480		coord: 212..355 e-value: 4.7E-37 score: 128.5
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 284..307
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 275..312
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..22
None	No IPR available	PANTHER	PTHR11727:SF7	DIMETHYLADENOSINE TRANSFERASE-RELATED	coord: 7..349
None	No IPR available	CDD	cd02440	AdoMet_MTases	coord: 56..138 e-value: 5.02043E-9 score: 51.2767
IPR001737	Ribosomal RNA adenine methyltransferase KsgA/Erm	PFAM	PF00398	RrnaAD	coord: 25..243 e-value: 5.0E-63 score: 212.6
IPR001737	Ribosomal RNA adenine methyltransferase KsgA/Erm	PANTHER	PTHR11727	DIMETHYLADENOSINE TRANSFERASE	coord: 7..349
IPR001737	Ribosomal RNA adenine methyltransferase KsgA/Erm	PROSITE	PS51689	SAM_RNA_A_N6_MT	coord: 26..351 score: 64.637054
IPR011530	Ribosomal RNA adenine dimethylase	TIGRFAM	TIGR00755	TIGR00755	coord: 25..254 e-value: 8.0E-76 score: 252.7
IPR020596	Ribosomal RNA adenine methylase transferase, conserved site	PROSITE	PS01131	RRNA_A_DIMETH	coord: 56..83
IPR029063	S-adenosyl-L-methionine-dependent methyltransferase	SUPERFAMILY	53335	S-adenosyl-L-methionine-dependent methyltransferases	coord: 21..246

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
MS018996.1	MS018996.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0000154	rRNA modification
biological_process	GO:0006364	rRNA processing
molecular_function	GO:0000179	rRNA (adenine-N6,N6-)-dimethyltransferase activity
molecular_function	GO:0008649	rRNA methyltransferase activity