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Sequences
The following sequences are available for this feature:
Gene sequence (with intron) Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below. GAAGAACGAAGACGTCCAATTCGAGAAGCTTTGGAAGAGGTGGAACGGACCGTGGAAGTGGAAGATACCCATAAATCATTCAAAGATTTGGAGCACCTTTGTGGATTTCTCATAACTTCGTGGGGTGGATTCTCCAATACCATGCACTTCTATGATTTATATTTG mRNA sequence GAAGAACGAAGACGTCCAATTCGAGAAGCTTTGGAAGAGGTGGAACGGACCGTGGAAGTGGAAGATACCCATAAATCATTCAAAGATTTGGAGCACCTTTGTGGATTTCTCATAACTTCGTGGGGTGGATTCTCCAATACCATGCACTTCTATGATTTATATTTG Coding sequence (CDS) GAAGAACGAAGACGTCCAATTCGAGAAGCTTTGGAAGAGGTGGAACGGACCGTGGAAGTGGAAGATACCCATAAATCATTCAAAGATTTGGAGCACCTTTGTGGATTTCTCATAACTTCGTGGGGTGGATTCTCCAATACCATGCACTTCTATGATTTATATTTG Protein sequence EERRRPIREALEEVERTVEVEDTHKSFKDLEHLCGFLITSWGGFSNTMHFYDLYL
Homology
BLAST of MS018991 vs. NCBI nr
Match: KAA0061663.1 (transcription factor GTE9 isoform X4 [Cucumis melo var. makuwa] >TYK21138.1 transcription factor GTE9 isoform X4 [Cucumis melo var. makuwa]) HSP 1 Score: 65.9 bits (159), Expect = 1.3e-07 Identity = 33/55 (60.00%), Postives = 41/55 (74.55%), Query Frame = 0
Query: 1 EERRRPIREALEEVERTVEVEDTHKSFKDLEHLCGFLITSWGGFSNTMHFYDLYL 56
EE R+ R ALEE+ER+V++ED+HKS KDLE LCG+ I GGF N M +Y LYL
Sbjct: 140 EEIRKAARRALEELERSVDIEDSHKSVKDLERLCGWPIPYVGGFKNRMEYYGLYL 194
BLAST of MS018991 vs. NCBI nr
Match: KAG6571342.1 (hypothetical protein SDJN03_30257, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 58.9 bits (141), Expect = 1.6e-05 Identity = 31/55 (56.36%), Postives = 36/55 (65.45%), Query Frame = 0
Query: 1 EERRRPIREALEEVERTVEVEDTHKSFKDLEHLCGFLITSWGGFSNTMHFYDLYL 56
EE R R LEEVER V V+D+H S ++ E LCGF I GGF N MH+Y LYL
Sbjct: 126 EEMRAAARRDLEEVERRVVVDDSHASLREYERLCGFPIPYVGGFLNRMHYYGLYL 180
BLAST of MS018991 vs. ExPASy TrEMBL
Match: A0A0A0KGL2 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G421730 PE=4 SV=1) HSP 1 Score: 69.3 bits (168), Expect = 5.6e-09 Identity = 35/55 (63.64%), Postives = 43/55 (78.18%), Query Frame = 0
Query: 1 EERRRPIREALEEVERTVEVEDTHKSFKDLEHLCGFLITSWGGFSNTMHFYDLYL 56
EE RR R+ALE++ER+V+VED+HKS KDLE LCG+ I S GGF N M +Y LYL
Sbjct: 157 EEIRRAARQALEDLERSVDVEDSHKSVKDLERLCGWPIPSVGGFKNRMEYYGLYL 211
BLAST of MS018991 vs. ExPASy TrEMBL
Match: A0A5D3DC97 (Transcription factor GTE9 isoform X4 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold75860G00060 PE=4 SV=1) HSP 1 Score: 65.9 bits (159), Expect = 6.2e-08 Identity = 33/55 (60.00%), Postives = 41/55 (74.55%), Query Frame = 0
Query: 1 EERRRPIREALEEVERTVEVEDTHKSFKDLEHLCGFLITSWGGFSNTMHFYDLYL 56
EE R+ R ALEE+ER+V++ED+HKS KDLE LCG+ I GGF N M +Y LYL
Sbjct: 140 EEIRKAARRALEELERSVDIEDSHKSVKDLERLCGWPIPYVGGFKNRMEYYGLYL 194
The following BLAST results are available for this feature:
| Match Name | E-value | Identity | Description | |
|---|
| KAA0061663.1 | 1.3e-07 | 60.00 | transcription factor GTE9 isoform X4 [Cucumis melo var. makuwa] >TYK21138.1 tran... | [more] |
| KAG6571342.1 | 1.6e-05 | 56.36 | hypothetical protein SDJN03_30257, partial [Cucurbita argyrosperma subsp. sorori... | [more] |
| Match Name | E-value | Identity | Description | |
|---|
| Match Name | E-value | Identity | Description | |
|---|
| A0A0A0KGL2 | 5.6e-09 | 63.64 | Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G421730 PE=4 SV=1 | [more] |
| A0A5D3DC97 | 6.2e-08 | 60.00 | Transcription factor GTE9 isoform X4 OS=Cucumis melo var. makuwa OX=1194695 GN=E... | [more] |
| Match Name | E-value | Identity | Description | |
|---|
Relationships
The following mRNA feature(s) are a part of this gene:
| Feature Name | Unique Name | Type |
|---|
| MS018991.1 | MS018991.1 | mRNA |
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