MS018977 (gene) Bitter gourd (TR) v1

Overview


Name	MS018977
Type	gene
Organism	Momordica charantia cv. TR (Bitter gourd (TR) v1)
Description	DEAD-box ATP-dependent RNA helicase
Location	scaffold20: 419992 .. 423970 (-)
RNA-Seq Expression	MS018977
Synteny	MS018977

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGTCGAAGAGGAAGTTTGGCTTCGAAGGCTTTGGAATCAACCGGCAAACGACTTACAATTTCGAGCGCTCCCAAGCTCCACAGCGGCTTTACGTCCCTCCCTCGTCGCGCGGCCATGGACACGACAACTACGAAGATACTGACGTTGATAATATAGAATATGACGATAATGATGCGGAGGAGGCGAGTGGGAATGGCGACGGTGGCGGTGGTGATGCCGGTGATGAAATTGATCCTTTAGATGCCTTTATGGAGGGAATTCACGAAGAGATGAAAGCGCCGCCGCCAGAGAAACCAAAGGAGAAGGTAGATAAGTACAGGGACGACGAAGAAGATGACCCAATGGAGAGCTTTCTGAGAGCCAAGAAGGACGTGGGACTAACGCTGGCAGCTGACGCGCTTAATGCTGGTTATGATTCGGATGAGGAGGTTTATGCGGCAGCAAAGGCAGTGGACGCAGGGATGGTCGAGTATGACTCGGATGATAACTTGATGATCCTGGAGAAGAAAAAAATCGAACCAATTCCTGCTCTAGATCACAGTTCCATTGACTACGAGCCGTTCTGTAAAGATTTTTACGAGGAGAGAGCTTCAATATCAGGTCATCTTTTAGTTGGAAGTTACTGTTTTGTTTTGGTTTTGAACTTGGTTACATTTTCAATATTGCTTTCGTACTTTTTCCTATTTTTCTCTTTGGATTTTGTGACTGCCTTTGATAAATTTGTGCACTATGGCTATGAATTTTTCTTCTTTTAACTTTTTTTTTTTTTGAAAAATTGAATTAAAATTGGATCAAAGTTGATATTTCTTTTGGGGAATTGTATGCTGTATGGAGATTATGATTTTGTTGGGACGTTTTTTTTCCTCACGAGAAAGAGTGAAAGATTTGCTAAGATTTTTTAATTTCACTCCATTTAATTAATTTTTAACCCTTTGGTTTTTGGCTTTTCCAGTTCAATCACAACAATAAACTGGGTGAAACATTCTTCCCTAATAAAAGAGATCCACGTTTCCAATGAAACGTATGGATTTATATGATTAAATTTGGTACTTACCATTTTTATGTTGTTGTTTTATGTCTGATGACTTCTGCTTACCTGCGATTTCCTAGGATAAAAAGTTGCTGAGCGTTTGGAGAATTAAAATGATTGATTCTGGTTCTAAATTTGACAAGTGTTTCCGTTTCTATATTTCATCTTTAGGGATGAGCGAGGAGGAAGTTTCTGAGTACCGAAAGAGTTTGGCCATTCGCGTGTCTGGTTTTGACGTTCCCAGGCCAATTAAAACATTTGAAGACTCTGGATTTTCCCCGCAACTTATGAATGCTATAAAAAAGCAAGGGTATGAGAAGCCTACTTCTATACAGTGCCAAGCTATGCCAATTGTGCTTTCCGGGAGAGATATCATTGGAATAGCAAAAACTGGCTCTGGTAAGACTGCTGCTTTTGTTCTTCCGATGATTGTTCATATTATGGATCAACCTGAACTTGAAAAAGAAGAGGGTCCTATTGGAGTGATCTGTGCACCCACCAGAGAACTTGCACACCAAATATACCTAGAGTGTAAAAAATTTTCAAAAGCACATGGGCTACGTGTCTCTGCAGTATATGGTGGGATGTCTAAATTCGACCAGCTTAAAGAACTCAAAGCTGGGTGTGAGATAGTTGTTGCCACTCCTGGCAGACTGATAGATATGATTAAAATGAAAGCTGTGACAATGTCAAAAGCCACATACTTGGTACTTGATGAAGCCGATAGAATGTTTGACCTTGGATTTGAACCCCAAATTCGTTCCATTGTTGGTCAGATTAGGCCAGACCGTCAGACCTTACTCTTTTCTGCAACTATGCCCCGAAAGGTTGAAAAGTTAGCTCGAGAAATCCTCACTGATCCTGTAAGAGTTACAGTAGGAGAGATTGGGATGGCCAACGAGGATATCACACAGGTTGTTCATGTACTTCCTTCTGATTTGGAGAAGTTGCCTTGGCTTCTTGAGAAGTTACCTGAAATGATCGATGATGGTGATGTCTTGGTGTTTGCATCTAAAAAAGCCACTGTGGATGAGATTGAATCTCAACTGGTGCAGAAAGGTTTCAAGGTTGCAGCTCTTCATGGTGACAAAGACCAGGCATCTCGAATGGAAACTCTGCAAAAATTTAAATCTGGTGTTTATCACGTTCTTATTGCAACTGATGTTGCTGCCCGTGGGCTTGACATTAAGTCGATAAAGTCCGTGGTGAACTTTGATACTGCAAAAGACATGGATATGCATGTCCATCGTATTGGTAGAACAGGTCGTGCGGGTGACAAGGATGGGAAAGCACACACCCTTATAACCCAGAAAGAGGCTCGATTTGCTGGTGAATTAGTTAATAGTTTGATTGCTGCTGGCCAGAATGTTTCAATGGAGCTGATGGATCTGGCAATGAAGGTAATTTTTTGTTATGCATATTATTAAATTTATAGTAAGCTAAAATTTTGCTTATGACTTATGAGTTACCTTTCTTTTTTTCAATTTGTTTGGAATTTGTAATCAGTTTGTCTTCTAACTTTTTACATGAATTATGACATTCACTTCTCACCTATTATTAACTGCAGAACTGTTTTGAGAATATTTTGGTATGTCAGTATTGAAAATAAATGTGAACAAGCCTTCTTTGGGAGATAAATAGTGTACTCAGCTATGAATTTTAATATGTATCACTGATGGCATTCAGTAGTGATGGCTTTGTATCTGAACATGATAAAGAACCATCTGATTAATTAATGTAACAGAAGATTCCTGCTTACTCTTGTTTTATTCTGTGATCGGAAATGCTTCTCTGTGGGCTTTTGCGGCCGAATTTTTTTGTAATATTCTATCGTTTTCGATCGGATAACAATTGGGGCTCCTTCTACCATGGTGGGTTGCTAGTGAATAAAGTAAAGGACTTGGAGGATGGGATAGGTTCAAACCATGATGGACACCTACCTTAGATATTTTAATCATATGATTTTTATTGGCAATAAAATGTAGTAGGGTTTGGCAATCGTCTCGTGAGATTAGTCATAAGGTGGGAGAATTCTTTCAAACACTCATAGATATTAAAAACAAACAATTGGGTCCTCCTCTTGTATGTTTTTGGGAGCTTTCTTGTTCTTTGGCTTGTGTGTTTGGTTTCTTAATGGCCTTGTTTGTTGTTCTTGTTCTTTCATCAAGCCTTCTCCCACCTTTTTTCCCCCTGCTTATATAAGGTTTAGCTGTTTGAGAAAGCTGAACTATTTTTTTACCTTTCATATCATTATAGGATGGGCGCTTCAGGTCCAAGCGTGATGCAAGAAAAAAAGGAGGTATTGTTCAACATCTGACTATGATTCCTCTTCCAAACTGTGAATTATCAATATATTAATAAAGTTTACCAATTATATATTTATATGATACATTGTATTGTCTTTGTAGGCGGTGGTGGTGGTGGTGGGAAGAAGGGTAAAGGGAGAGGCGGCAATGGTCGAGGCGTGCGTGGGGTGGATTTCGGTATGGGAATTGGTTACAACCCAGAAAGCAGTAGTACCCCTTCAACAAACAATGTTCAAAGTCGATCTGCAGCGGTAAATTCCTTGAGGACAGGAATGATCGCACAATTTAAGAGCAGTTTCGTTGCTGCTTCATCGGCCCCTCCAAGTCAGGGTTCGAATAACAGTTACAGCGTGCCAGCAAACAGAAGGCCAACATTAGCAGGCTTCGTATCGGGTGGCTCGATTGGTGGGGGTTCGAACAGCCCGACACCTCCAGCGTCAAGAGTGAACTCGTACGCCCCAAATGCCGGAGAATATTCAAGCCAAAAGAACTCAGAAAGGTTGTTAAATCGTTCCCCCTTTCTGTTTGTTTTTGAACCTGTTTTTTACTTTATCAATATCTTCCTCATTTGTGCCCATACAATCTGATTGCAGTTCTAGCGATAGGCCTCGAGAAAGGCGGAGACCGTCTGGTTGGGACAGA

mRNA sequence

ATGTCGAAGAGGAAGTTTGGCTTCGAAGGCTTTGGAATCAACCGGCAAACGACTTACAATTTCGAGCGCTCCCAAGCTCCACAGCGGCTTTACGTCCCTCCCTCGTCGCGCGGCCATGGACACGACAACTACGAAGATACTGACGTTGATAATATAGAATATGACGATAATGATGCGGAGGAGGCGAGTGGGAATGGCGACGGTGGCGGTGGTGATGCCGGTGATGAAATTGATCCTTTAGATGCCTTTATGGAGGGAATTCACGAAGAGATGAAAGCGCCGCCGCCAGAGAAACCAAAGGAGAAGGTAGATAAGTACAGGGACGACGAAGAAGATGACCCAATGGAGAGCTTTCTGAGAGCCAAGAAGGACGTGGGACTAACGCTGGCAGCTGACGCGCTTAATGCTGGTTATGATTCGGATGAGGAGGTTTATGCGGCAGCAAAGGCAGTGGACGCAGGGATGGTCGAGTATGACTCGGATGATAACTTGATGATCCTGGAGAAGAAAAAAATCGAACCAATTCCTGCTCTAGATCACAGTTCCATTGACTACGAGCCGTTCTGTAAAGATTTTTACGAGGAGAGAGCTTCAATATCAGGGATGAGCGAGGAGGAAGTTTCTGAGTACCGAAAGAGTTTGGCCATTCGCGTGTCTGGTTTTGACGTTCCCAGGCCAATTAAAACATTTGAAGACTCTGGATTTTCCCCGCAACTTATGAATGCTATAAAAAAGCAAGGGTATGAGAAGCCTACTTCTATACAGTGCCAAGCTATGCCAATTGTGCTTTCCGGGAGAGATATCATTGGAATAGCAAAAACTGGCTCTGGTAAGACTGCTGCTTTTGTTCTTCCGATGATTGTTCATATTATGGATCAACCTGAACTTGAAAAAGAAGAGGGTCCTATTGGAGTGATCTGTGCACCCACCAGAGAACTTGCACACCAAATATACCTAGAGTGTAAAAAATTTTCAAAAGCACATGGGCTACGTGTCTCTGCAGTATATGGTGGGATGTCTAAATTCGACCAGCTTAAAGAACTCAAAGCTGGGTGTGAGATAGTTGTTGCCACTCCTGGCAGACTGATAGATATGATTAAAATGAAAGCTGTGACAATGTCAAAAGCCACATACTTGGTACTTGATGAAGCCGATAGAATGTTTGACCTTGGATTTGAACCCCAAATTCGTTCCATTGTTGGTCAGATTAGGCCAGACCGTCAGACCTTACTCTTTTCTGCAACTATGCCCCGAAAGGTTGAAAAGTTAGCTCGAGAAATCCTCACTGATCCTGTAAGAGTTACAGTAGGAGAGATTGGGATGGCCAACGAGGATATCACACAGGTTGTTCATGTACTTCCTTCTGATTTGGAGAAGTTGCCTTGGCTTCTTGAGAAGTTACCTGAAATGATCGATGATGGTGATGTCTTGGTGTTTGCATCTAAAAAAGCCACTGTGGATGAGATTGAATCTCAACTGGTGCAGAAAGGTTTCAAGGTTGCAGCTCTTCATGGTGACAAAGACCAGGCATCTCGAATGGAAACTCTGCAAAAATTTAAATCTGGTGTTTATCACGTTCTTATTGCAACTGATGTTGCTGCCCGTGGGCTTGACATTAAGTCGATAAAGTCCGTGGTGAACTTTGATACTGCAAAAGACATGGATATGCATGTCCATCGTATTGGTAGAACAGGTCGTGCGGGTGACAAGGATGGGAAAGCACACACCCTTATAACCCAGAAAGAGGCTCGATTTGCTGGTGAATTAGTTAATAGTTTGATTGCTGCTGGCCAGAATGTTTCAATGGAGCTGATGGATCTGGCAATGAAGGATGGGCGCTTCAGGTCCAAGCGTGATGCAAGAAAAAAAGGAGGCGGTGGTGGTGGTGGTGGGAAGAAGGGTAAAGGGAGAGGCGGCAATGGTCGAGGCGTGCGTGGGGTGGATTTCGGTATGGGAATTGGTTACAACCCAGAAAGCAGTAGTACCCCTTCAACAAACAATGTTCAAAGTCGATCTGCAGCGGTAAATTCCTTGAGGACAGGAATGATCGCACAATTTAAGAGCAGTTTCGTTGCTGCTTCATCGGCCCCTCCAAGTCAGGGTTCGAATAACAGTTACAGCGTGCCAGCAAACAGAAGGCCAACATTAGCAGGCTTCGTATCGGGTGGCTCGATTGGTGGGGGTTCGAACAGCCCGACACCTCCAGCGTCAAGAGTGAACTCGTACGCCCCAAATGCCGGAGAATATTCAAGCCAAAAGAACTCAGAAAGTTCTAGCGATAGGCCTCGAGAAAGGCGGAGACCGTCTGGTTGGGACAGA

Coding sequence (CDS)

ATGTCGAAGAGGAAGTTTGGCTTCGAAGGCTTTGGAATCAACCGGCAAACGACTTACAATTTCGAGCGCTCCCAAGCTCCACAGCGGCTTTACGTCCCTCCCTCGTCGCGCGGCCATGGACACGACAACTACGAAGATACTGACGTTGATAATATAGAATATGACGATAATGATGCGGAGGAGGCGAGTGGGAATGGCGACGGTGGCGGTGGTGATGCCGGTGATGAAATTGATCCTTTAGATGCCTTTATGGAGGGAATTCACGAAGAGATGAAAGCGCCGCCGCCAGAGAAACCAAAGGAGAAGGTAGATAAGTACAGGGACGACGAAGAAGATGACCCAATGGAGAGCTTTCTGAGAGCCAAGAAGGACGTGGGACTAACGCTGGCAGCTGACGCGCTTAATGCTGGTTATGATTCGGATGAGGAGGTTTATGCGGCAGCAAAGGCAGTGGACGCAGGGATGGTCGAGTATGACTCGGATGATAACTTGATGATCCTGGAGAAGAAAAAAATCGAACCAATTCCTGCTCTAGATCACAGTTCCATTGACTACGAGCCGTTCTGTAAAGATTTTTACGAGGAGAGAGCTTCAATATCAGGGATGAGCGAGGAGGAAGTTTCTGAGTACCGAAAGAGTTTGGCCATTCGCGTGTCTGGTTTTGACGTTCCCAGGCCAATTAAAACATTTGAAGACTCTGGATTTTCCCCGCAACTTATGAATGCTATAAAAAAGCAAGGGTATGAGAAGCCTACTTCTATACAGTGCCAAGCTATGCCAATTGTGCTTTCCGGGAGAGATATCATTGGAATAGCAAAAACTGGCTCTGGTAAGACTGCTGCTTTTGTTCTTCCGATGATTGTTCATATTATGGATCAACCTGAACTTGAAAAAGAAGAGGGTCCTATTGGAGTGATCTGTGCACCCACCAGAGAACTTGCACACCAAATATACCTAGAGTGTAAAAAATTTTCAAAAGCACATGGGCTACGTGTCTCTGCAGTATATGGTGGGATGTCTAAATTCGACCAGCTTAAAGAACTCAAAGCTGGGTGTGAGATAGTTGTTGCCACTCCTGGCAGACTGATAGATATGATTAAAATGAAAGCTGTGACAATGTCAAAAGCCACATACTTGGTACTTGATGAAGCCGATAGAATGTTTGACCTTGGATTTGAACCCCAAATTCGTTCCATTGTTGGTCAGATTAGGCCAGACCGTCAGACCTTACTCTTTTCTGCAACTATGCCCCGAAAGGTTGAAAAGTTAGCTCGAGAAATCCTCACTGATCCTGTAAGAGTTACAGTAGGAGAGATTGGGATGGCCAACGAGGATATCACACAGGTTGTTCATGTACTTCCTTCTGATTTGGAGAAGTTGCCTTGGCTTCTTGAGAAGTTACCTGAAATGATCGATGATGGTGATGTCTTGGTGTTTGCATCTAAAAAAGCCACTGTGGATGAGATTGAATCTCAACTGGTGCAGAAAGGTTTCAAGGTTGCAGCTCTTCATGGTGACAAAGACCAGGCATCTCGAATGGAAACTCTGCAAAAATTTAAATCTGGTGTTTATCACGTTCTTATTGCAACTGATGTTGCTGCCCGTGGGCTTGACATTAAGTCGATAAAGTCCGTGGTGAACTTTGATACTGCAAAAGACATGGATATGCATGTCCATCGTATTGGTAGAACAGGTCGTGCGGGTGACAAGGATGGGAAAGCACACACCCTTATAACCCAGAAAGAGGCTCGATTTGCTGGTGAATTAGTTAATAGTTTGATTGCTGCTGGCCAGAATGTTTCAATGGAGCTGATGGATCTGGCAATGAAGGATGGGCGCTTCAGGTCCAAGCGTGATGCAAGAAAAAAAGGAGGCGGTGGTGGTGGTGGTGGGAAGAAGGGTAAAGGGAGAGGCGGCAATGGTCGAGGCGTGCGTGGGGTGGATTTCGGTATGGGAATTGGTTACAACCCAGAAAGCAGTAGTACCCCTTCAACAAACAATGTTCAAAGTCGATCTGCAGCGGTAAATTCCTTGAGGACAGGAATGATCGCACAATTTAAGAGCAGTTTCGTTGCTGCTTCATCGGCCCCTCCAAGTCAGGGTTCGAATAACAGTTACAGCGTGCCAGCAAACAGAAGGCCAACATTAGCAGGCTTCGTATCGGGTGGCTCGATTGGTGGGGGTTCGAACAGCCCGACACCTCCAGCGTCAAGAGTGAACTCGTACGCCCCAAATGCCGGAGAATATTCAAGCCAAAAGAACTCAGAAAGTTCTAGCGATAGGCCTCGAGAAAGGCGGAGACCGTCTGGTTGGGACAGA

Protein sequence

MSKRKFGFEGFGINRQTTYNFERSQAPQRLYVPPSSRGHGHDNYEDTDVDNIEYDDNDAEEASGNGDGGGGDAGDEIDPLDAFMEGIHEEMKAPPPEKPKEKVDKYRDDEEDDPMESFLRAKKDVGLTLAADALNAGYDSDEEVYAAAKAVDAGMVEYDSDDNLMILEKKKIEPIPALDHSSIDYEPFCKDFYEERASISGMSEEEVSEYRKSLAIRVSGFDVPRPIKTFEDSGFSPQLMNAIKKQGYEKPTSIQCQAMPIVLSGRDIIGIAKTGSGKTAAFVLPMIVHIMDQPELEKEEGPIGVICAPTRELAHQIYLECKKFSKAHGLRVSAVYGGMSKFDQLKELKAGCEIVVATPGRLIDMIKMKAVTMSKATYLVLDEADRMFDLGFEPQIRSIVGQIRPDRQTLLFSATMPRKVEKLAREILTDPVRVTVGEIGMANEDITQVVHVLPSDLEKLPWLLEKLPEMIDDGDVLVFASKKATVDEIESQLVQKGFKVAALHGDKDQASRMETLQKFKSGVYHVLIATDVAARGLDIKSIKSVVNFDTAKDMDMHVHRIGRTGRAGDKDGKAHTLITQKEARFAGELVNSLIAAGQNVSMELMDLAMKDGRFRSKRDARKKGGGGGGGGKKGKGRGGNGRGVRGVDFGMGIGYNPESSSTPSTNNVQSRSAAVNSLRTGMIAQFKSSFVAASSAPPSQGSNNSYSVPANRRPTLAGFVSGGSIGGGSNSPTPPASRVNSYAPNAGEYSSQKNSESSSDRPRERRRPSGWDR

Homology

[Close]

BLAST of MS018977 vs. NCBI nr
Match: XP_022155302.1 (DEAD-box ATP-dependent RNA helicase 24 [Momordica charantia])

HSP 1 Score: 1479.5 bits (3829), Expect = 0.0e+00
Identity = 770/773 (99.61%), Postives = 770/773 (99.61%), Query Frame = 0


Query: 1   MSKRKFGFEGFGINRQTTYNFERSQAPQRLYVPPSSRGHGHDNYEDTDVDNIEYDDNDAE 60
           MSKRKFGFEGFGINRQTTYNFERSQAPQRLYVPPSSRGHGHDNYEDTDVDNIEYDDNDAE
Sbjct: 1   MSKRKFGFEGFGINRQTTYNFERSQAPQRLYVPPSSRGHGHDNYEDTDVDNIEYDDNDAE 60

Query: 61  EASGNGDGGGGDAGDEIDPLDAFMEGIHEEMKAPPPEKPKEKVDKYRDDEEDDPMESFLR 120
           EASGNGDGGGGDAGDEIDPLDAFMEGIHEEMKAPPPEKPKEKVDKYRDDEEDDPMESFLR
Sbjct: 61  EASGNGDGGGGDAGDEIDPLDAFMEGIHEEMKAPPPEKPKEKVDKYRDDEEDDPMESFLR 120

Query: 121 AKKDVGLTLAADALNAGYDSDEEVYAAAKAVDAGMVEYDSDDNLMILEKKKIEPIPALDH 180
           AKKDVGLTLAADALNAGYDSDEEVYAAAKAVDAGMVEYDSDDNLMILEKKKIEPIPALDH
Sbjct: 121 AKKDVGLTLAADALNAGYDSDEEVYAAAKAVDAGMVEYDSDDNLMILEKKKIEPIPALDH 180

Query: 181 SSIDYEPFCKDFYEERASISGMSEEEVSEYRKSLAIRVSGFDVPRPIKTFEDSGFSPQLM 240
           SSIDYEPFCKDFYEERASISGMSEEEVSEYRKSLAIRVSGFDVPRPIKTFEDSG SPQLM
Sbjct: 181 SSIDYEPFCKDFYEERASISGMSEEEVSEYRKSLAIRVSGFDVPRPIKTFEDSGLSPQLM 240

Query: 241 NAIKKQGYEKPTSIQCQAMPIVLSGRDIIGIAKTGSGKTAAFVLPMIVHIMDQPELEKEE 300
           NAIKKQGYEKPTSIQCQAMPIVLSGRDIIGIAKTGSGKTAAFVLPMIVHIMDQPELEKEE
Sbjct: 241 NAIKKQGYEKPTSIQCQAMPIVLSGRDIIGIAKTGSGKTAAFVLPMIVHIMDQPELEKEE 300

Query: 301 GPIGVICAPTRELAHQIYLECKKFSKAHGLRVSAVYGGMSKFDQLKELKAGCEIVVATPG 360
           GPIGVICAPTRELAHQIYLECKKFSKAHGLRVSAVYGGMSKFDQLKELKAGCEIVVATPG
Sbjct: 301 GPIGVICAPTRELAHQIYLECKKFSKAHGLRVSAVYGGMSKFDQLKELKAGCEIVVATPG 360

Query: 361 RLIDMIKMKAVTMSKATYLVLDEADRMFDLGFEPQIRSIVGQIRPDRQTLLFSATMPRKV 420
           RLIDMIKMKAVTMSKATYLVLDEADRMFDLGFEPQIRSIVGQIRPDRQTLLFSATMPRKV
Sbjct: 361 RLIDMIKMKAVTMSKATYLVLDEADRMFDLGFEPQIRSIVGQIRPDRQTLLFSATMPRKV 420

Query: 421 EKLAREILTDPVRVTVGEIGMANEDITQVVHVLPSDLEKLPWLLEKLPEMIDDGDVLVFA 480
           EKLAREILTDPVRVTVGEIGMANEDITQVVHVLPSDLEKLPWLLEKLPEMIDDGDVLVFA
Sbjct: 421 EKLAREILTDPVRVTVGEIGMANEDITQVVHVLPSDLEKLPWLLEKLPEMIDDGDVLVFA 480

Query: 481 SKKATVDEIESQLVQKGFKVAALHGDKDQASRMETLQKFKSGVYHVLIATDVAARGLDIK 540
           SKKATVDEIESQLVQKGFKVAALHGDKDQASRMETLQKFKSGVYHVLIATDVAARGLDIK
Sbjct: 481 SKKATVDEIESQLVQKGFKVAALHGDKDQASRMETLQKFKSGVYHVLIATDVAARGLDIK 540

Query: 541 SIKSVVNFDTAKDMDMHVHRIGRTGRAGDKDGKAHTLITQKEARFAGELVNSLIAAGQNV 600
           SIKSVVNFDTAKDMDMHVHRIGRTGRAGDKDGKAHTLITQKEARFAGELVNSLIAAGQNV
Sbjct: 541 SIKSVVNFDTAKDMDMHVHRIGRTGRAGDKDGKAHTLITQKEARFAGELVNSLIAAGQNV 600

Query: 601 SMELMDLAMKDGRFRSKRDARKKGGGGGGGGKKGKGRGGNGRGVRGVDFGMGIGYNPESS 660
           S ELMDLAMKDGRFRSKRDARKKGGGGGGGGKKGKGRGGNGRGVRGVDFGMGIGYNPESS
Sbjct: 601 STELMDLAMKDGRFRSKRDARKKGGGGGGGGKKGKGRGGNGRGVRGVDFGMGIGYNPESS 660

Query: 661 STPSTNNVQSRSAAVNSLRTGMIAQFKSSFVAASSAPPSQGSNNSYSVPANRRPTLAGFV 720
           STPSTNNVQSRSAAVNSLRTGMIAQFKSSFVAASS PPSQGSNNSYSVPANRRPTLAGFV
Sbjct: 661 STPSTNNVQSRSAAVNSLRTGMIAQFKSSFVAASSTPPSQGSNNSYSVPANRRPTLAGFV 720

Query: 721 SGGSIGGGSNSPTPPASRVNSYAPNAGEYSSQKNSESSSDRPRERRRPSGWDR 774
           SGGSIGGGSNSPTPPASRVNSYAPNAGEYSSQKNSESSSDRPRERRRPSGWDR
Sbjct: 721 SGGSIGGGSNSPTPPASRVNSYAPNAGEYSSQKNSESSSDRPRERRRPSGWDR 773

[Close]

BLAST of MS018977 vs. NCBI nr
Match: XP_008454276.1 (PREDICTED: DEAD-box ATP-dependent RNA helicase 24 [Cucumis melo])

HSP 1 Score: 1395.9 bits (3612), Expect = 0.0e+00
Identity = 729/777 (93.82%), Postives = 753/777 (96.91%), Query Frame = 0


Query: 1   MSKRKFGFEGFGINRQTTYNFERSQAPQRLYVPPSSRGHGHDNYEDTDVDNIEYDDNDAE 60
           MSKRKFGFEGFGINRQTTYNFERSQAPQRLYVPPSSRGHGHDNYEDTDVDNIEYDDND E
Sbjct: 1   MSKRKFGFEGFGINRQTTYNFERSQAPQRLYVPPSSRGHGHDNYEDTDVDNIEYDDNDGE 60

Query: 61  EASGNGDGGGGDAG---DEIDPLDAFMEGIHEEMKAPPPEKPKEKVDKYRDDEEDDPMES 120
           EASGN DGG G AG   +EIDPLDAFMEGIHEEMKAPPP KPKEKVDKYRDDEEDDPMES
Sbjct: 61  EASGNDDGGAGAAGAEEEEIDPLDAFMEGIHEEMKAPPPPKPKEKVDKYRDDEEDDPMES 120

Query: 121 FLRAKKDVGLTLAADALNAGYDSDEEVYAAAKAVDAGMVEYDSDDNLMILEKKKIEPIPA 180
           FLRAKKDVGLTLAADAL+AGYDSDEEVYAAAKAVDAGMVEYDSDDN++I+EKKKIEPIPA
Sbjct: 121 FLRAKKDVGLTLAADALHAGYDSDEEVYAAAKAVDAGMVEYDSDDNMLIVEKKKIEPIPA 180

Query: 181 LDHSSIDYEPFCKDFYEERASISGMSEEEVSEYRKSLAIRVSGFDVPRPIKTFEDSGFSP 240
           LDHSSIDYEPF KDFYEE+ASISGMSEEEVSEYRKSLAIRVSGFDVPRPIKTFED GFSP
Sbjct: 181 LDHSSIDYEPFNKDFYEEKASISGMSEEEVSEYRKSLAIRVSGFDVPRPIKTFEDCGFSP 240

Query: 241 QLMNAIKKQGYEKPTSIQCQAMPIVLSGRDIIGIAKTGSGKTAAFVLPMIVHIMDQPELE 300
           QLMNAIKKQGYEKPTSIQCQAMPIVLSG DIIGIAKTGSGKTAAFVLPMIVHIMDQPELE
Sbjct: 241 QLMNAIKKQGYEKPTSIQCQAMPIVLSGGDIIGIAKTGSGKTAAFVLPMIVHIMDQPELE 300

Query: 301 KEEGPIGVICAPTRELAHQIYLECKKFSKAHGLRVSAVYGGMSKFDQLKELKAGCEIVVA 360
           KEEGPIGVICAPTRELAHQIYLECKKFSKAHGLRVSAVYGGMSKFDQLKELKAGCEIVVA
Sbjct: 301 KEEGPIGVICAPTRELAHQIYLECKKFSKAHGLRVSAVYGGMSKFDQLKELKAGCEIVVA 360

Query: 361 TPGRLIDMIKMKAVTMSKATYLVLDEADRMFDLGFEPQIRSIVGQIRPDRQTLLFSATMP 420
           TPGRLIDMIK+KA+TMSKATYLVLDEADRMFDLGFEPQIRSIVGQIRPDRQTLLFSATMP
Sbjct: 361 TPGRLIDMIKLKALTMSKATYLVLDEADRMFDLGFEPQIRSIVGQIRPDRQTLLFSATMP 420

Query: 421 RKVEKLAREILTDPVRVTVGEIGMANEDITQVVHVLPSDLEKLPWLLEKLPEMIDDGDVL 480
           RKVEKLAREILTDPVRVTVGE+GMANEDITQVVHVLPSDLEKLPWLLEKLPEMIDDGDVL
Sbjct: 421 RKVEKLAREILTDPVRVTVGEVGMANEDITQVVHVLPSDLEKLPWLLEKLPEMIDDGDVL 480

Query: 481 VFASKKATVDEIESQLVQKGFKVAALHGDKDQASRMETLQKFKSGVYHVLIATDVAARGL 540
           VFASKKATVDE+ESQL+QKGFKVAALHGDKDQASRMETLQKFKSGVYHVLIATDVAARGL
Sbjct: 481 VFASKKATVDEVESQLLQKGFKVAALHGDKDQASRMETLQKFKSGVYHVLIATDVAARGL 540

Query: 541 DIKSIKSVVNFDTAKDMDMHVHRIGRTGRAGDKDGKAHTLITQKEARFAGELVNSLIAAG 600
           DIKSIKSVVNFD AKDMDMHVHRIGRTGRAGDKDG+AHTLITQKEARFAGELVNSLIAAG
Sbjct: 541 DIKSIKSVVNFDIAKDMDMHVHRIGRTGRAGDKDGRAHTLITQKEARFAGELVNSLIAAG 600

Query: 601 QNVSMELMDLAMKDGRFRSKRDARKKGGGGGGGGKKGKGRGGNGRGVRGVDFGMGIGYNP 660
           QNVS+ELMDLAMKDGRFRSKRDARKK GGGGGGGKKGK RG NGRGVRGVDFG+GIGYNP
Sbjct: 601 QNVSVELMDLAMKDGRFRSKRDARKK-GGGGGGGKKGKSRGSNGRGVRGVDFGLGIGYNP 660

Query: 661 E-SSSTPSTNNVQSRSAAVNSLRTGMIAQFKSSFVAASSAPPSQGSNNSYSVPANRRPTL 720
           E S STPST NVQSRSAAVNSLRTGM+AQFKS+FVAASSAPPSQGS+NSY++PAN+RPTL
Sbjct: 661 EGSGSTPSTTNVQSRSAAVNSLRTGMMAQFKSNFVAASSAPPSQGSSNSYNMPANKRPTL 720

Query: 721 AGFVSGGSIGGGSNSPTPPASRVNSYAPNAGEYSSQKNSESSSDRPRERRRPSGWDR 774
           +GFVSGGSIGGG+NSP PP SR NSY PN  EYSSQKN+ESSSDRPRER+RPSGWDR
Sbjct: 721 SGFVSGGSIGGGANSPAPPVSRGNSYMPNPVEYSSQKNTESSSDRPRERKRPSGWDR 776

[Close]

BLAST of MS018977 vs. NCBI nr
Match: XP_004152219.1 (DEAD-box ATP-dependent RNA helicase 24 [Cucumis sativus] >KGN52865.1 hypothetical protein Csa_014964 [Cucumis sativus])

HSP 1 Score: 1393.6 bits (3606), Expect = 0.0e+00
Identity = 723/777 (93.05%), Postives = 753/777 (96.91%), Query Frame = 0


Query: 1   MSKRKFGFEGFGINRQTTYNFERSQAPQRLYVPPSSRGHGHDNYEDTDVDNIEYDDNDAE 60
           MSKRKFGFEGFGINRQTTYNFERSQAPQRLYVPPSSRGHGHDNYEDTDVDNIEYDDND E
Sbjct: 1   MSKRKFGFEGFGINRQTTYNFERSQAPQRLYVPPSSRGHGHDNYEDTDVDNIEYDDNDGE 60

Query: 61  EASGNGDGGGGDAG---DEIDPLDAFMEGIHEEMKAPPPEKPKEKVDKYRDDEEDDPMES 120
           EASGN DGG G +G   +EIDPLDAFMEGIHEEMKAPPP KPKEKVDKYRDD+E+DPMES
Sbjct: 61  EASGNADGGAGASGAEEEEIDPLDAFMEGIHEEMKAPPPPKPKEKVDKYRDDDEEDPMES 120

Query: 121 FLRAKKDVGLTLAADALNAGYDSDEEVYAAAKAVDAGMVEYDSDDNLMILEKKKIEPIPA 180
           FLRAKKDVGLTLAADAL+AGYDSDEEVYAAAKAVDAGMVEYDSDDN++I+EKKKIEPIP+
Sbjct: 121 FLRAKKDVGLTLAADALHAGYDSDEEVYAAAKAVDAGMVEYDSDDNMLIVEKKKIEPIPS 180

Query: 181 LDHSSIDYEPFCKDFYEERASISGMSEEEVSEYRKSLAIRVSGFDVPRPIKTFEDSGFSP 240
           LDHSSIDYEPF KDFYEE+ASISGMSEEEVSEYRKSLAIRVSGFDVPRP+KTFED GFSP
Sbjct: 181 LDHSSIDYEPFNKDFYEEKASISGMSEEEVSEYRKSLAIRVSGFDVPRPVKTFEDCGFSP 240

Query: 241 QLMNAIKKQGYEKPTSIQCQAMPIVLSGRDIIGIAKTGSGKTAAFVLPMIVHIMDQPELE 300
           QLMNAIKKQGYEKPTSIQCQAMPIVLSG DIIGIAKTGSGKTAAFVLPMIVHIMDQPELE
Sbjct: 241 QLMNAIKKQGYEKPTSIQCQAMPIVLSGGDIIGIAKTGSGKTAAFVLPMIVHIMDQPELE 300

Query: 301 KEEGPIGVICAPTRELAHQIYLECKKFSKAHGLRVSAVYGGMSKFDQLKELKAGCEIVVA 360
           KEEGPIGVICAPTRELAHQIYLECKKFSKAHGLRVSAVYGGMSKFDQLKELKAGCEIVVA
Sbjct: 301 KEEGPIGVICAPTRELAHQIYLECKKFSKAHGLRVSAVYGGMSKFDQLKELKAGCEIVVA 360

Query: 361 TPGRLIDMIKMKAVTMSKATYLVLDEADRMFDLGFEPQIRSIVGQIRPDRQTLLFSATMP 420
           TPGRLIDMIK+KA+TMSKATYLVLDEADRMFDLGFEPQIRSIVGQIRPDRQTLLFSATMP
Sbjct: 361 TPGRLIDMIKLKALTMSKATYLVLDEADRMFDLGFEPQIRSIVGQIRPDRQTLLFSATMP 420

Query: 421 RKVEKLAREILTDPVRVTVGEIGMANEDITQVVHVLPSDLEKLPWLLEKLPEMIDDGDVL 480
           RKVEKLAREILTDPVRVTVGE+GMANEDITQVVHVLPSDLEKLPWLLEKLPEMIDDGDVL
Sbjct: 421 RKVEKLAREILTDPVRVTVGEVGMANEDITQVVHVLPSDLEKLPWLLEKLPEMIDDGDVL 480

Query: 481 VFASKKATVDEIESQLVQKGFKVAALHGDKDQASRMETLQKFKSGVYHVLIATDVAARGL 540
           VFASKKATVDE+ESQL+QK FKVAALHGDKDQASRMETLQKFKSGVYHVLIATDVAARGL
Sbjct: 481 VFASKKATVDEVESQLLQKSFKVAALHGDKDQASRMETLQKFKSGVYHVLIATDVAARGL 540

Query: 541 DIKSIKSVVNFDTAKDMDMHVHRIGRTGRAGDKDGKAHTLITQKEARFAGELVNSLIAAG 600
           DIKSIKSVVNFD AKDMDMHVHRIGRTGRAGDKDG+AHTLITQKEARFAGELVNSLIAAG
Sbjct: 541 DIKSIKSVVNFDIAKDMDMHVHRIGRTGRAGDKDGRAHTLITQKEARFAGELVNSLIAAG 600

Query: 601 QNVSMELMDLAMKDGRFRSKRDARKKGGGGGGGGKKGKGRGGNGRGVRGVDFGMGIGYNP 660
           QNVS+ELMDLAMKDGRFRSKRDARKKGGGGGGGGKKGK RG NGRGVRGVDFG+GIGYNP
Sbjct: 601 QNVSVELMDLAMKDGRFRSKRDARKKGGGGGGGGKKGKSRGSNGRGVRGVDFGLGIGYNP 660

Query: 661 E-SSSTPSTNNVQSRSAAVNSLRTGMIAQFKSSFVAASSAPPSQGSNNSYSVPANRRPTL 720
           E + STPST NVQSRSAAVNSLRTGM+AQFKS+FVAASSAPP+QGS+NSY+VPAN+RPTL
Sbjct: 661 EGTGSTPSTTNVQSRSAAVNSLRTGMMAQFKSNFVAASSAPPNQGSSNSYNVPANKRPTL 720

Query: 721 AGFVSGGSIGGGSNSPTPPASRVNSYAPNAGEYSSQKNSESSSDRPRERRRPSGWDR 774
           +GFVSGGSIGGG+NSP PP SR NSY PN  EYSSQKN+ESSSDRPRER+RPSGWDR
Sbjct: 721 SGFVSGGSIGGGANSPAPPVSRGNSYMPNPVEYSSQKNTESSSDRPRERKRPSGWDR 777

[Close]

BLAST of MS018977 vs. NCBI nr
Match: XP_022948804.1 (DEAD-box ATP-dependent RNA helicase 24 isoform X1 [Cucurbita moschata])

HSP 1 Score: 1390.2 bits (3597), Expect = 0.0e+00
Identity = 728/779 (93.45%), Postives = 753/779 (96.66%), Query Frame = 0


Query: 1   MSKRKFGFEGFGINRQTTYNFERSQAPQRLYVPPSSRGHGHDNYEDTDVDNIEYDDNDAE 60
           MSKRKFGFEGFGINRQTTYNFERSQAPQRLYVPPSSRGHGHDNYEDTDVDNIEYDDN+AE
Sbjct: 1   MSKRKFGFEGFGINRQTTYNFERSQAPQRLYVPPSSRGHGHDNYEDTDVDNIEYDDNEAE 60

Query: 61  EASGNGD---GGGGDAGDEIDPLDAFMEGIHEEMKAPPPEKPKEKVDKYRDDEEDDPMES 120
           EASGNGD   G GG   +EIDPLDAFMEGIHEEM+APPP KPKEKVDKYRD+EEDDPMES
Sbjct: 61  EASGNGDNVAGAGGGEEEEIDPLDAFMEGIHEEMRAPPPPKPKEKVDKYRDEEEDDPMES 120

Query: 121 FLRAKKDVGLTLAADALNAGYDSDEEVYAAAKAVDAGMVEYDSDDNLMILEKKKIEPIPA 180
           FL+AKKDVGLTLAADAL+AGYDSDEEVYAAAKAVDA MVEYDSDDN++I+EKKKIE IPA
Sbjct: 121 FLKAKKDVGLTLAADALHAGYDSDEEVYAAAKAVDAAMVEYDSDDNMLIVEKKKIESIPA 180

Query: 181 LDHSSIDYEPFCKDFYEERASISGMSEEEVSEYRKSLAIRVSGFDVPRPIKTFEDSGFSP 240
           L+HSSIDYEPF KDFYEE+ASISGMSEEEVSEYRK+LAIRVSGFDVPRPIKTFEDSGFSP
Sbjct: 181 LEHSSIDYEPFNKDFYEEKASISGMSEEEVSEYRKNLAIRVSGFDVPRPIKTFEDSGFSP 240

Query: 241 QLMNAIKKQGYEKPTSIQCQAMPIVLSGRDIIGIAKTGSGKTAAFVLPMIVHIMDQPELE 300
           QLMNAIKKQGYEKPTSIQCQAMPIVLSGRDIIGIAKTGSGKTAAFVLPMIVHIMDQPELE
Sbjct: 241 QLMNAIKKQGYEKPTSIQCQAMPIVLSGRDIIGIAKTGSGKTAAFVLPMIVHIMDQPELE 300

Query: 301 KEEGPIGVICAPTRELAHQIYLECKKFSKAHGLRVSAVYGGMSKFDQLKELKAGCEIVVA 360
           KEEGPIGVICAPTRELAHQIYLECKKFSK HGLRVSAVYGGMSKFDQ+KELKAGCEIVVA
Sbjct: 301 KEEGPIGVICAPTRELAHQIYLECKKFSKVHGLRVSAVYGGMSKFDQIKELKAGCEIVVA 360

Query: 361 TPGRLIDMIKMKAVTMSKATYLVLDEADRMFDLGFEPQIRSIVGQIRPDRQTLLFSATMP 420
           TPGRLIDMIKMKA+TMSKATYLVLDEADRMFDLGFEPQIRSIVGQIRPDRQTLLFSATMP
Sbjct: 361 TPGRLIDMIKMKALTMSKATYLVLDEADRMFDLGFEPQIRSIVGQIRPDRQTLLFSATMP 420

Query: 421 RKVEKLAREILTDPVRVTVGEIGMANEDITQVVHVLPSDLEKLPWLLEKLPEMIDDGDVL 480
           RKVEKLAREILTDPVRVTVGE+GMANEDITQVVHVLPSDLEKLPWLLEKLPEMIDDGDVL
Sbjct: 421 RKVEKLAREILTDPVRVTVGEVGMANEDITQVVHVLPSDLEKLPWLLEKLPEMIDDGDVL 480

Query: 481 VFASKKATVDEIESQLVQKGFKVAALHGDKDQASRMETLQKFKSGVYHVLIATDVAARGL 540
           VFASKKATVDEIESQL+QKGFKVAALHGDKDQASRMETLQKFKSGVYH LIATDVAARGL
Sbjct: 481 VFASKKATVDEIESQLLQKGFKVAALHGDKDQASRMETLQKFKSGVYHALIATDVAARGL 540

Query: 541 DIKSIKSVVNFDTAKDMDMHVHRIGRTGRAGDKDGKAHTLITQKEARFAGELVNSLIAAG 600
           DIKSIKSVVNFD AKDMDMHVHRIGRTGRAGD+DGKAHTLITQKEARFAGELVNSLIAAG
Sbjct: 541 DIKSIKSVVNFDIAKDMDMHVHRIGRTGRAGDRDGKAHTLITQKEARFAGELVNSLIAAG 600

Query: 601 QNVSMELMDLAMKDGRFRSKRDARKK-GGGGGGGGKKGKGR-GGNGRGVRGVDFGMGIGY 660
           QNVSMELMDLAMKDGRFRSKRDARKK GGGGGGGGKKGKGR GGNGRGVRGVDFG+GIGY
Sbjct: 601 QNVSMELMDLAMKDGRFRSKRDARKKGGGGGGGGGKKGKGRGGGNGRGVRGVDFGLGIGY 660

Query: 661 NPESS-STPSTNNVQSRSAAVNSLRTGMIAQFKSSFVAASSAPPSQGSNNSYSVPANRRP 720
           NPESS S PSTNNVQSRSAAVNSLRTGM+AQFKSSFVAASSAPPSQGSN+SYS+PAN+RP
Sbjct: 661 NPESSGSNPSTNNVQSRSAAVNSLRTGMMAQFKSSFVAASSAPPSQGSNSSYSMPANKRP 720

Query: 721 TLAGFVSGGSIGGGSNSPTPPASRVNSYAPNAGEYSSQKNSESSSDRPRERRRPSGWDR 774
           TLAGFVSGGSIGGG+N P PP  R NSY PNAGE+SSQKNSESS DR +ERRRPSGWDR
Sbjct: 721 TLAGFVSGGSIGGGANRPPPPPPRANSYVPNAGEFSSQKNSESSGDRSKERRRPSGWDR 779

[Close]

BLAST of MS018977 vs. NCBI nr
Match: XP_022948807.1 (DEAD-box ATP-dependent RNA helicase 24 isoform X2 [Cucurbita moschata])

HSP 1 Score: 1388.6 bits (3593), Expect = 0.0e+00
Identity = 727/778 (93.44%), Postives = 752/778 (96.66%), Query Frame = 0


Query: 1   MSKRKFGFEGFGINRQTTYNFERSQAPQRLYVPPSSRGHGHDNYEDTDVDNIEYDDNDAE 60
           MSKRKFGFEGFGINRQTTYNFERSQAPQRLYVPPSSRGHGHDNYEDTDVDNIEYDDN+AE
Sbjct: 1   MSKRKFGFEGFGINRQTTYNFERSQAPQRLYVPPSSRGHGHDNYEDTDVDNIEYDDNEAE 60

Query: 61  EASGNGD---GGGGDAGDEIDPLDAFMEGIHEEMKAPPPEKPKEKVDKYRDDEEDDPMES 120
           EASGNGD   G GG   +EIDPLDAFMEGIHEEM+APPP KPKEKVDKYRD+EEDDPMES
Sbjct: 61  EASGNGDNVAGAGGGEEEEIDPLDAFMEGIHEEMRAPPPPKPKEKVDKYRDEEEDDPMES 120

Query: 121 FLRAKKDVGLTLAADALNAGYDSDEEVYAAAKAVDAGMVEYDSDDNLMILEKKKIEPIPA 180
           FL+AKKDVGLTLAADAL+AGYDSDEEVYAAAKAVDA MVEYDSDDN++I+EKKKIE IPA
Sbjct: 121 FLKAKKDVGLTLAADALHAGYDSDEEVYAAAKAVDAAMVEYDSDDNMLIVEKKKIESIPA 180

Query: 181 LDHSSIDYEPFCKDFYEERASISGMSEEEVSEYRKSLAIRVSGFDVPRPIKTFEDSGFSP 240
           L+HSSIDYEPF KDFYEE+ASISGMSEEEVSEYRK+LAIRVSGFDVPRPIKTFEDSGFSP
Sbjct: 181 LEHSSIDYEPFNKDFYEEKASISGMSEEEVSEYRKNLAIRVSGFDVPRPIKTFEDSGFSP 240

Query: 241 QLMNAIKKQGYEKPTSIQCQAMPIVLSGRDIIGIAKTGSGKTAAFVLPMIVHIMDQPELE 300
           QLMNAIKKQGYEKPTSIQCQAMPIVLSGRDIIGIAKTGSGKTAAFVLPMIVHIMDQPELE
Sbjct: 241 QLMNAIKKQGYEKPTSIQCQAMPIVLSGRDIIGIAKTGSGKTAAFVLPMIVHIMDQPELE 300

Query: 301 KEEGPIGVICAPTRELAHQIYLECKKFSKAHGLRVSAVYGGMSKFDQLKELKAGCEIVVA 360
           KEEGPIGVICAPTRELAHQIYLECKKFSK HGLRVSAVYGGMSKFDQ+KELKAGCEIVVA
Sbjct: 301 KEEGPIGVICAPTRELAHQIYLECKKFSKVHGLRVSAVYGGMSKFDQIKELKAGCEIVVA 360

Query: 361 TPGRLIDMIKMKAVTMSKATYLVLDEADRMFDLGFEPQIRSIVGQIRPDRQTLLFSATMP 420
           TPGRLIDMIKMKA+TMSKATYLVLDEADRMFDLGFEPQIRSIVGQIRPDRQTLLFSATMP
Sbjct: 361 TPGRLIDMIKMKALTMSKATYLVLDEADRMFDLGFEPQIRSIVGQIRPDRQTLLFSATMP 420

Query: 421 RKVEKLAREILTDPVRVTVGEIGMANEDITQVVHVLPSDLEKLPWLLEKLPEMIDDGDVL 480
           RKVEKLAREILTDPVRVTVGE+GMANEDITQVVHVLPSDLEKLPWLLEKLPEMIDDGDVL
Sbjct: 421 RKVEKLAREILTDPVRVTVGEVGMANEDITQVVHVLPSDLEKLPWLLEKLPEMIDDGDVL 480

Query: 481 VFASKKATVDEIESQLVQKGFKVAALHGDKDQASRMETLQKFKSGVYHVLIATDVAARGL 540
           VFASKKATVDEIESQL+QKGFKVAALHGDKDQASRMETLQKFKSGVYH LIATDVAARGL
Sbjct: 481 VFASKKATVDEIESQLLQKGFKVAALHGDKDQASRMETLQKFKSGVYHALIATDVAARGL 540

Query: 541 DIKSIKSVVNFDTAKDMDMHVHRIGRTGRAGDKDGKAHTLITQKEARFAGELVNSLIAAG 600
           DIKSIKSVVNFD AKDMDMHVHRIGRTGRAGD+DGKAHTLITQKEARFAGELVNSLIAAG
Sbjct: 541 DIKSIKSVVNFDIAKDMDMHVHRIGRTGRAGDRDGKAHTLITQKEARFAGELVNSLIAAG 600

Query: 601 QNVSMELMDLAMKDGRFRSKRDARKKGGGGGGGGKKGKGR-GGNGRGVRGVDFGMGIGYN 660
           QNVSMELMDLAMKDGRFRSKRDARKK GGGGGGGKKGKGR GGNGRGVRGVDFG+GIGYN
Sbjct: 601 QNVSMELMDLAMKDGRFRSKRDARKK-GGGGGGGKKGKGRGGGNGRGVRGVDFGLGIGYN 660

Query: 661 PESS-STPSTNNVQSRSAAVNSLRTGMIAQFKSSFVAASSAPPSQGSNNSYSVPANRRPT 720
           PESS S PSTNNVQSRSAAVNSLRTGM+AQFKSSFVAASSAPPSQGSN+SYS+PAN+RPT
Sbjct: 661 PESSGSNPSTNNVQSRSAAVNSLRTGMMAQFKSSFVAASSAPPSQGSNSSYSMPANKRPT 720

Query: 721 LAGFVSGGSIGGGSNSPTPPASRVNSYAPNAGEYSSQKNSESSSDRPRERRRPSGWDR 774
           LAGFVSGGSIGGG+N P PP  R NSY PNAGE+SSQKNSESS DR +ERRRPSGWDR
Sbjct: 721 LAGFVSGGSIGGGANRPPPPPPRANSYVPNAGEFSSQKNSESSGDRSKERRRPSGWDR 777

[Close]

BLAST of MS018977 vs. ExPASy Swiss-Prot
Match: O22907 (DEAD-box ATP-dependent RNA helicase 24 OS=Arabidopsis thaliana OX=3702 GN=RH24 PE=1 SV=2)

HSP 1 Score: 1102.4 bits (2850), Expect = 0.0e+00
Identity = 585/776 (75.39%), Postives = 672/776 (86.60%), Query Frame = 0


Query: 1   MSKRKFGFEGFGINRQTTYNFERSQAPQRLYVPPSSRGHGHDNYEDTDVDNIEYDDN-DA 60
           MS RKFG EGFGINRQT+Y+FERSQAPQRLYVPPSSR  G DN ED D+DNI+Y +N +A
Sbjct: 1   MSNRKFGMEGFGINRQTSYSFERSQAPQRLYVPPSSR--GGDNSEDADLDNIDYMENEEA 60

Query: 61  E---EASGNGDGGGGDAGDEIDPLDAFMEGIHEEMKAPPPEKPKEKVDKYRDDEEDDPME 120
           E   E  G+    GG+  DEIDPLDAFMEGIH+EMK+ PP KPKEK+++Y+DD +DDP+E
Sbjct: 61  EEDIEEGGSAAASGGEV-DEIDPLDAFMEGIHQEMKSAPPPKPKEKLERYKDD-DDDPVE 120

Query: 121 SFLRAKKDVGLTLAADALNAGYDSDEEVYAAAKAVDAGMVEYDSDDNLMILEKKKIEPIP 180
           S+L+AKKD+GLTLAADALNAGY+SDEEVYAAAKAVDAGM++YDSDDN ++++K+KIEPI 
Sbjct: 121 SYLKAKKDLGLTLAADALNAGYNSDEEVYAAAKAVDAGMLDYDSDDNPIVVDKRKIEPIT 180

Query: 181 ALDHSSIDYEPFCKDFYEERASISGMSEEEVSEYRKSLAIRVSGFDVPRPIKTFEDSGFS 240
           ALDHSSIDYEP  KDFYEE  SISGM+E+E ++YR+ L IRVSGFDV RP+KTFED GFS
Sbjct: 181 ALDHSSIDYEPINKDFYEELESISGMTEQETTDYRQRLGIRVSGFDVHRPVKTFEDCGFS 240

Query: 241 PQLMNAIKKQGYEKPTSIQCQAMPIVLSGRDIIGIAKTGSGKTAAFVLPMIVHIMDQPEL 300
            Q+M+AIKKQ YEKPT+IQCQA+PIVLSGRD+IGIAKTGSGKTAAFVLPMIVHIMDQPEL
Sbjct: 241 SQIMSAIKKQAYEKPTAIQCQALPIVLSGRDVIGIAKTGSGKTAAFVLPMIVHIMDQPEL 300

Query: 301 EKEEGPIGVICAPTRELAHQIYLECKKFSKAHGLRVSAVYGGMSKFDQLKELKAGCEIVV 360
           +++EGPIGVICAPTRELAHQI+LE KKFSKA+GLRVSAVYGGMSK +Q KELKAGCEIVV
Sbjct: 301 QRDEGPIGVICAPTRELAHQIFLEAKKFSKAYGLRVSAVYGGMSKHEQFKELKAGCEIVV 360

Query: 361 ATPGRLIDMIKMKAVTMSKATYLVLDEADRMFDLGFEPQIRSIVGQIRPDRQTLLFSATM 420
           ATPGRLIDM+KMKA+TM +A+YLVLDEADRMFDLGFEPQ+RSIVGQIRPDRQTLLFSATM
Sbjct: 361 ATPGRLIDMLKMKALTMMRASYLVLDEADRMFDLGFEPQVRSIVGQIRPDRQTLLFSATM 420

Query: 421 PRKVEKLAREILTDPVRVTVGEIGMANEDITQVVHVLPSDLEKLPWLLEKLPEMIDDGDV 480
           P KVEKLAREIL+DP+RVTVGE+GMANEDITQVV+V+PSD EKLPWLLEKLP MID+GDV
Sbjct: 421 PWKVEKLAREILSDPIRVTVGEVGMANEDITQVVNVIPSDAEKLPWLLEKLPGMIDEGDV 480

Query: 481 LVFASKKATVDEIESQLVQKGFKVAALHGDKDQASRMETLQKFKSGVYHVLIATDVAARG 540
           LVFASKKATVDEIE+QL    FKVAALHGDKDQASRMETLQKFKSGV+HVLIATDVAARG
Sbjct: 481 LVFASKKATVDEIEAQLTLNSFKVAALHGDKDQASRMETLQKFKSGVHHVLIATDVAARG 540

Query: 541 LDIKSIKSVVNFDTAKDMDMHVHRIGRTGRAGDKDGKAHTLITQKEARFAGELVNSLIAA 600
           LDIKS+K+VVN+D AKDMDMHVHRIGRTGRAGD+DG A+TL+TQ+EARFAGELVNSL+AA
Sbjct: 541 LDIKSLKTVVNYDIAKDMDMHVHRIGRTGRAGDRDGVAYTLVTQREARFAGELVNSLVAA 600

Query: 601 GQNVSMELMDLAMKDGRFRSKRDARKKGGGGGGGGKKGKGRGGNGRGVRGVDFGMGIGYN 660
           GQNV  EL DLAMKDGRF+SKRD RK       GGKKG+G GG  +GVRGVDFG+GIG++
Sbjct: 601 GQNVPPELTDLAMKDGRFKSKRDGRK-------GGKKGRGGGGGNKGVRGVDFGLGIGFS 660

Query: 661 PESSSTPSTNNVQSRSAAVNSLRTGMIAQFKSSFVAASSAPPSQGSNNSYSVPANRRPTL 720
            ESS TPS+    SRS A+NS+RTG++AQFK+SFVAA+   PS   N +Y    N+RP+L
Sbjct: 661 SESSRTPSSKAAPSRSGAINSVRTGVMAQFKNSFVAAT---PSNPQNQAY---PNKRPSL 720

Query: 721 AGFVSGGSIGGGSNSPTPPASRVNSYAPNAGEYSSQKNSESSSDRPRERRRPSGWD 773
            GFVSGG+IGG        A  V      +   SSQ +S+SS +RPRER+R SGWD
Sbjct: 721 MGFVSGGTIGGDMGRTQSQAPPVAPTQNASSHNSSQNHSQSSENRPRERKRRSGWD 759

[Close]

BLAST of MS018977 vs. ExPASy Swiss-Prot
Match: Q10MH8 (DEAD-box ATP-dependent RNA helicase 24 OS=Oryza sativa subsp. japonica OX=39947 GN=Os03g0308500 PE=2 SV=1)

HSP 1 Score: 1044.6 bits (2700), Expect = 5.3e-304
Identity = 574/788 (72.84%), Postives = 649/788 (82.36%), Query Frame = 0


Query: 1   MSKR-KFGFEGFGINRQTTYNFERSQAPQRLYVPPSSRGHGHDNYEDTDVDNIEYDDNDA 60
           MSKR K G  GF I R T+Y+FERSQ PQRLYVP           +D D+D+I + D+ A
Sbjct: 1   MSKRPKLG--GFSIPRPTSYSFERSQPPQRLYVPA----------DDPDLDDIAFSDDAA 60

Query: 61  EEASGNGDGGGGDAGD--EIDPLDAFMEGIHEEMKAPPPEKPKEKVDKYRDDEEDDPMES 120
             +     GGGG AGD  EIDPLDAFM  I EE++APPP    E + +   D+EDDP+ES
Sbjct: 61  APSDAPPAGGGGAAGDEEEIDPLDAFMAEIQEEIRAPPPAPKPEALRRADSDDEDDPVES 120

Query: 121 FLRAKKDVGLTLAADALNAGYDSDEEVYAAAKAVDAGMVEYDSDDNLMILEKKKIEPIPA 180
           FLRAKKD GL LAADA++AGYDSDEEVYAAAKAVDAGM+EYDSDDN ++++KKKIEPIP 
Sbjct: 121 FLRAKKDSGLALAADAMHAGYDSDEEVYAAAKAVDAGMMEYDSDDNPIVVDKKKIEPIPP 180

Query: 181 LDHSSIDYEPFCKDFYEERASISGMSEEEVSEYRKSLAIRVSGFDVPRPIKTFEDSGFSP 240
           LDHS+I+YEPF KDFYEE+ S+SGMSE+EV++Y KSLAIRVSGFDVPRPIK+F D GF  
Sbjct: 181 LDHSTIEYEPFNKDFYEEKPSVSGMSEQEVADYMKSLAIRVSGFDVPRPIKSFADCGFPV 240

Query: 241 QLMNAIKKQGYEKPTSIQCQAMPIVLSGRDIIGIAKTGSGKTAAFVLPMIVHIMDQPELE 300
           QLMNAI KQGYEKPT+IQCQA+PIVLSGRDIIGIAKTGSGKTAAFVLPMIVHIMDQPELE
Sbjct: 241 QLMNAIAKQGYEKPTTIQCQALPIVLSGRDIIGIAKTGSGKTAAFVLPMIVHIMDQPELE 300

Query: 301 KEEGPIGVICAPTRELAHQIYLECKKFSKAHGLRVSAVYGGMSKFDQLKELKAGCEIVVA 360
           KEEGPIGV+CAPTRELAHQIYLE KKF+K + LRV+AVYGG+SKFDQ KELKAGCEIV+A
Sbjct: 301 KEEGPIGVVCAPTRELAHQIYLEAKKFAKPYNLRVAAVYGGVSKFDQFKELKAGCEIVIA 360

Query: 361 TPGRLIDMIKMKAVTMSKATYLVLDEADRMFDLGFEPQIRSIVGQIRPDRQTLLFSATMP 420
           TPGRLID++KMKA+ M +ATYLVLDEADRMFDLGFEPQIRSIVGQIRPDRQTLLFSATMP
Sbjct: 361 TPGRLIDLLKMKALKMFRATYLVLDEADRMFDLGFEPQIRSIVGQIRPDRQTLLFSATMP 420

Query: 421 RKVEKLAREILTDPVRVTVGEIGMANEDITQVVHVLPSDLEKLPWLLEKLPEMIDDGDVL 480
            KVE+LAREILTDP+RVTVG++G ANEDI QVV+VLPSD EK+PWLLEKLP MIDDGDVL
Sbjct: 421 YKVERLAREILTDPIRVTVGQVGSANEDIKQVVNVLPSDAEKMPWLLEKLPGMIDDGDVL 480

Query: 481 VFASKKATVDEIESQLVQKGFKVAALHGDKDQASRMETLQKFKSGVYHVLIATDVAARGL 540
           VFA+KKA VDEIESQL Q+GF++AALHGDKDQASRMETLQKFKSGVYHVL+ATDVAARGL
Sbjct: 481 VFAAKKARVDEIESQLNQRGFRIAALHGDKDQASRMETLQKFKSGVYHVLVATDVAARGL 540

Query: 541 DIKSIKSVVNFDTAKDMDMHVHRIGRTGRAGDKDGKAHTLITQKEARFAGELVNSLIAAG 600
           DIKSIK+VVNFD AK+MDMH+HRIGRTGRAGDKDG A+TLITQKE RFAGELV+ LIAAG
Sbjct: 541 DIKSIKTVVNFDIAKEMDMHIHRIGRTGRAGDKDGTAYTLITQKEVRFAGELVHCLIAAG 600

Query: 601 QNVSMELMDLAMKDGRFRSKRDARK------KGGGGGGGGKKGKGRGGNGRGVRGVDFGM 660
           Q+V  ELMDLAMKDGRFR+ RD+RK      KG GGGGGG  G G  G GRGVRGVDFG+
Sbjct: 601 QDVPNELMDLAMKDGRFRANRDSRKGGKKSGKGKGGGGGGGGGSGARGRGRGVRGVDFGL 660

Query: 661 GIGYNPESSSTPSTNNVQSRSAAVNSLRTGMIAQFKSSFVAASSAPPSQGSNNSYSVPAN 720
           GIGYN ES S P+      RSAA+NSL+TGM+  FKSSFV+ASS+     S  S   P++
Sbjct: 661 GIGYNAESGSVPA-----PRSAALNSLKTGMMQNFKSSFVSASSSNTPSNSAPSRGAPSS 720

Query: 721 -RRPTLAGFVSGGSIGGGSNS-----PTPPASRVNSYAPNAGEYSSQKNSESSSDRPRER 774
             RP L GFVSGG+IGG +N      P P     +  A N  E ++  N ESS DR RER
Sbjct: 721 FVRPALRGFVSGGTIGGDANQARAVLPAPSFVPASRPAENTVE-NANPNPESSRDRTRER 770

[Close]

BLAST of MS018977 vs. ExPASy Swiss-Prot
Match: Q810A7 (ATP-dependent RNA helicase DDX42 OS=Mus musculus OX=10090 GN=Ddx42 PE=1 SV=3)

HSP 1 Score: 523.9 bits (1348), Expect = 3.2e-147
Identity = 344/804 (42.79%), Postives = 466/804 (57.96%), Query Frame = 0


Query: 2   SKRKFGFEGFGINRQTTYNFERSQAPQRLY----VPPSSRGHGH-------------DNY 61
           +KR FGF GF I+       E ++ PQ+ +       SS G G                 
Sbjct: 10  TKRGFGFGGFAISAGKK---EEAKLPQQSHSAFGAASSSSGFGKSAPPQLPSFYKIGSKR 69

Query: 62  EDTDVDNIEYDDNDAEEASGNGD----------------GGGGDAGDEIDPLDAFMEGIH 121
            + D +N  ++D   EE S N D                    D+  + DPL+AFM  + 
Sbjct: 70  ANFDEENAYFEDE--EEDSSNVDLPYIPAENSPTRQQFHSKPADSDSDDDPLEAFMAEVE 129

Query: 122 EE-----MKAPPPEKPKEKVDKYRDD-EEDDPMESFLRAKKDVGLTLAADALNAGYDSDE 181
           ++      +    +K ++ V   RDD EE+D  E++ R          A+   AG   +E
Sbjct: 130 DQAARDMKRLEEKDKERKNVKGIRDDIEEEDDQEAYFR--------YMAENPTAGVVQEE 189

Query: 182 EVYAAAKAVDAGMVEYDSDDNLMILEKKKIEPIPALDHSSIDYEPFCKDFYEERASISGM 241
           E            +EYDSD N +   KK I+P+P +DHS IDY PF K+FY E   I+ +
Sbjct: 190 E---------EDNLEYDSDGNPIAPSKKIIDPLPPIDHSEIDYPPFEKNFYNEHEEITNL 249

Query: 242 SEEEVSEYRKSLAIRVSGFDVPRPIKTFEDSGFSPQLMNAIKKQGYEKPTSIQCQAMPIV 301
           + +++ + R  L +RVSG   PRP  +F   GF  QLM+ I+K  Y +PT IQCQ +P+ 
Sbjct: 250 TPQQLIDLRHKLNLRVSGAAPPRPGSSFAHFGFDEQLMHQIRKSEYTQPTPIQCQGVPVA 309

Query: 302 LSGRDIIGIAKTGSGKTAAFVLPMIVHIMDQPELEKEEGPIGVICAPTRELAHQIYLECK 361
           LSGRD+IGIAKTGSGKTAAF+ PM++HIMDQ ELE  +GPI VI  PTREL  QI+ ECK
Sbjct: 310 LSGRDMIGIAKTGSGKTAAFIWPMLIHIMDQKELEPGDGPIAVIVCPTRELCQQIHAECK 369

Query: 362 KFSKAHGLRVSAVYGGMSKFDQLKELKAGCEIVVATPGRLIDMIKMKAVTMSKATYLVLD 421
           +F KA+ LR  AVYGG S ++Q K L+ G EIVV TPGRLID +K KA  + + +YLV D
Sbjct: 370 RFGKAYNLRSVAVYGGGSMWEQAKALQEGAEIVVCTPGRLIDHVKKKATNLQRVSYLVFD 429

Query: 422 EADRMFDLGFEPQIRSIVGQIRPDRQTLLFSATMPRKVEKLAREILTDPVRVTVGEIGMA 481
           EADRMFD+GFE Q+RSI   +RPDRQTLLFSAT  +K+EKLAR+IL DP+RV  G+IG A
Sbjct: 430 EADRMFDMGFEYQVRSIASHVRPDRQTLLFSATFRKKIEKLARDILIDPIRVVQGDIGEA 489

Query: 482 NEDITQVVHVLPSDLEKLPWLLEKLPEMIDDGDVLVFASKKATVDEIESQLVQKGFKVAA 541
           NED+TQ+V +L S   K  WL  +L E    G VL+F +KKA  +E+ S L Q+G  +  
Sbjct: 490 NEDVTQIVEILHSGPSKWNWLTRRLVEFTSSGSVLLFVTKKANAEELASNLKQEGHNLGL 549

Query: 542 LHGDKDQASRMETLQKFKSGVYHVLIATDVAARGLDIKSIKSVVNFDTAKDMDMHVHRIG 601
           LHGD DQ+ R + +  FK     VL+ATDVAARGLDI SIK+V+N+D A+D+D H HRIG
Sbjct: 550 LHGDMDQSERNKVISDFKKKDIPVLVATDVAARGLDIPSIKTVINYDVARDIDTHTHRIG 609

Query: 602 RTGRAGDKDGKAHTLITQKEARFAGELVNSLIAAGQNVSMELMDLAMKDGRFRSKRDARK 661
           RTGRAG+K G A+TL+T K++ FAG+LV +L  A Q+VS EL+DLAM++  FR  R    
Sbjct: 610 RTGRAGEK-GVAYTLLTPKDSNFAGDLVRNLEGANQHVSKELLDLAMQNAWFRKSRFKGG 669

Query: 662 KGG----GGGGGGKKGKGRGGNGRGVRGVDFGMGIGYNPESSSTPSTNNVQSRSAAVNSL 721
           KG     GGGG G + +   G+    RG +  +   Y    +  PST  +  R   + ++
Sbjct: 670 KGKKLNIGGGGLGYRERPGLGSENSDRGNNNNVMSNY---EAYKPSTGAMGDR---LTAM 729

Query: 722 RTGMIAQFKSSFVAASSAPPSQGSNNSYSVPANRRPTLAGFVSGGSIGG--------GSN 752
           +    +Q+KS FVAAS +    G++++ +         +G+ S GS+          G N
Sbjct: 730 KAAFQSQYKSHFVAASLSNQKAGTSSAGA---------SGWTSAGSLNSVPTNSAQQGHN 775

[Close]

BLAST of MS018977 vs. ExPASy Swiss-Prot
Match: Q86XP3 (ATP-dependent RNA helicase DDX42 OS=Homo sapiens OX=9606 GN=DDX42 PE=1 SV=1)

HSP 1 Score: 523.1 bits (1346), Expect = 5.4e-147
Identity = 341/795 (42.89%), Postives = 461/795 (57.99%), Query Frame = 0


Query: 2   SKRKFGFEGFGIN-------------------RQTTYNFERSQAPQ--RLYVPPSSRGHG 61
           +KR FGF GF I+                     ++  F +S  PQ    Y   S R + 
Sbjct: 10  TKRGFGFGGFAISAGKKEEPKLPQQSHSAFGATSSSSGFGKSAPPQLPSFYKIGSKRANF 69

Query: 62  HDN---YEDTDVDNIEYD------DNDAEEASGNGDGGGGDAGDEIDPLDAFMEGIHEE- 121
            +    +ED + D+   D      +N       +      D+ D  DPL+AFM  + ++ 
Sbjct: 70  DEENAYFEDEEEDSSNVDLPYIPAENSPTRQQFHSKPVDSDSDD--DPLEAFMAEVEDQA 129

Query: 122 ----MKAPPPEKPKEKVDKYRDD-EEDDPMESFLRAKKDVGLTLAADALNAGYDSDEEVY 181
                +    +K ++ V   RDD EE+D  E++ R          A+   AG   +EE  
Sbjct: 130 ARDMKRLEEKDKERKNVKGIRDDIEEEDDQEAYFR--------YMAENPTAGVVQEEE-- 189

Query: 182 AAAKAVDAGMVEYDSDDNLMILEKKKIEPIPALDHSSIDYEPFCKDFYEERASISGMSEE 241
                     +EYDSD N +   KK I+P+P +DHS IDY PF K+FY E   I+ ++ +
Sbjct: 190 -------EDNLEYDSDGNPIAPTKKIIDPLPPIDHSEIDYPPFEKNFYNEHEEITNLTPQ 249

Query: 242 EVSEYRKSLAIRVSGFDVPRPIKTFEDSGFSPQLMNAIKKQGYEKPTSIQCQAMPIVLSG 301
           ++ + R  L +RVSG   PRP  +F   GF  QLM+ I+K  Y +PT IQCQ +P+ LSG
Sbjct: 250 QLIDLRHKLNLRVSGAAPPRPGSSFAHFGFDEQLMHQIRKSEYTQPTPIQCQGVPVALSG 309

Query: 302 RDIIGIAKTGSGKTAAFVLPMIVHIMDQPELEKEEGPIGVICAPTRELAHQIYLECKKFS 361
           RD+IGIAKTGSGKTAAF+ PM++HIMDQ ELE  +GPI VI  PTREL  QI+ ECK+F 
Sbjct: 310 RDMIGIAKTGSGKTAAFIWPMLIHIMDQKELEPGDGPIAVIVCPTRELCQQIHAECKRFG 369

Query: 362 KAHGLRVSAVYGGMSKFDQLKELKAGCEIVVATPGRLIDMIKMKAVTMSKATYLVLDEAD 421
           KA+ LR  AVYGG S ++Q K L+ G EIVV TPGRLID +K KA  + + +YLV DEAD
Sbjct: 370 KAYNLRSVAVYGGGSMWEQAKALQEGAEIVVCTPGRLIDHVKKKATNLQRVSYLVFDEAD 429

Query: 422 RMFDLGFEPQIRSIVGQIRPDRQTLLFSATMPRKVEKLAREILTDPVRVTVGEIGMANED 481
           RMFD+GFE Q+RSI   +RPDRQTLLFSAT  +K+EKLAR+IL DP+RV  G+IG ANED
Sbjct: 430 RMFDMGFEYQVRSIASHVRPDRQTLLFSATFRKKIEKLARDILIDPIRVVQGDIGEANED 489

Query: 482 ITQVVHVLPSDLEKLPWLLEKLPEMIDDGDVLVFASKKATVDEIESQLVQKGFKVAALHG 541
           +TQ+V +L S   K  WL  +L E    G VL+F +KKA  +E+ + L Q+G  +  LHG
Sbjct: 490 VTQIVEILHSGPSKWNWLTRRLVEFTSSGSVLLFVTKKANAEELANNLKQEGHNLGLLHG 549

Query: 542 DKDQASRMETLQKFKSGVYHVLIATDVAARGLDIKSIKSVVNFDTAKDMDMHVHRIGRTG 601
           D DQ+ R + +  FK     VL+ATDVAARGLDI SIK+V+N+D A+D+D H HRIGRTG
Sbjct: 550 DMDQSERNKVISDFKKKDIPVLVATDVAARGLDIPSIKTVINYDVARDIDTHTHRIGRTG 609

Query: 602 RAGDKDGKAHTLITQKEARFAGELVNSLIAAGQNVSMELMDLAMKDGRFRSKRDARKKGG 661
           RAG+K G A+TL+T K++ FAG+LV +L  A Q+VS EL+DLAM++  FR    +R KGG
Sbjct: 610 RAGEK-GVAYTLLTPKDSNFAGDLVRNLEGANQHVSKELLDLAMQNAWFRK---SRFKGG 669

Query: 662 GG-----GGGGKKGKGRGGNGRGVRGVDFGMGIGYNPESSSTPSTNNVQSRSAAVNSLRT 721
            G     GGGG   + R   G G   +D G     +   +  PST  +  R   + +++ 
Sbjct: 670 KGKKLNIGGGGLGYRER--PGLGSENMDRGNNNVMSNYEAYKPSTGAMGDR---LTAMKA 729

Query: 722 GMIAQFKSSFVAASSAPPSQGSNNSYSVPANRRPTLAGFVSGGSIGG--------GSNSP 748
              +Q+KS FVAAS +    GS+ + +         +G+ S GS+          G NSP
Sbjct: 730 AFQSQYKSHFVAASLSNQKAGSSAAGA---------SGWTSAGSLNSVPTNSAQQGHNSP 767

[Close]

BLAST of MS018977 vs. ExPASy Swiss-Prot
Match: Q5F485 (ATP-dependent RNA helicase DDX42 OS=Gallus gallus OX=9031 GN=DDX42 PE=2 SV=1)

HSP 1 Score: 522.7 bits (1345), Expect = 7.1e-147
Identity = 352/827 (42.56%), Postives = 475/827 (57.44%), Query Frame = 0


Query: 2   SKRKFGFEGFGIN---------RQTTYN----------FERSQAPQ--RLYVPPSSRGHG 61
           +KR FGF GF I           Q +++          F +S  PQ    Y   S R + 
Sbjct: 10  TKRGFGFGGFAITPGKKEEPKLSQQSHSAFGTAGSSAAFAKSGPPQLPSFYKIGSKRANF 69

Query: 62  HDN---YEDTDVDNIEYD------DNDAEEASGNGDGGGGDAGDEIDPLDAFMEGIHEE- 121
            +    +ED + DN   D      +N       N      D+ D  DPL+AFM  + ++ 
Sbjct: 70  DEENAYFEDEEEDNSNVDLPYIPAENSPTRQQFNSKSADSDSDD--DPLEAFMAEVEDQA 129

Query: 122 ----MKAPPPEKPKEKVDKYRDD-EEDDPMESFLRAKKDVGLTLAADALNAGYDSDEEVY 181
                +    +K K+     RDD EE+D  E++ R          A+   AG   +EE  
Sbjct: 130 ARDMKRLEDKDKEKKNAKGIRDDIEEEDDQEAYFR--------YMAENPTAGVVQEEE-- 189

Query: 182 AAAKAVDAGMVEYDSDDNLMILEKKKIEPIPALDHSSIDYEPFCKDFYEERASISGMSEE 241
                     +EYDSD N +   KK I+P+P +DHS I+Y PF K+FY+E   I+ ++ +
Sbjct: 190 -------EDNLEYDSDGNPIAPSKKIIDPLPPIDHSEIEYPPFEKNFYDEHEEITSLTPQ 249

Query: 242 EVSEYRKSLAIRVSGFDVPRPIKTFEDSGFSPQLMNAIKKQGYEKPTSIQCQAMPIVLSG 301
           +V E R  L +RVSG   PRP  +F   GF  QLM+ I+K  Y +PT IQCQ +P+ +SG
Sbjct: 250 QVVELRHKLNLRVSGAAPPRPGSSFARFGFDEQLMHQIRKSEYTQPTPIQCQGVPVAMSG 309

Query: 302 RDIIGIAKTGSGKTAAFVLPMIVHIMDQPELEKEEGPIGVICAPTRELAHQIYLECKKFS 361
           RD+IGIAKTGSGKTAAF+ PM++HIMDQ ELE  +GPI VI  PTREL  QI+ ECK+F 
Sbjct: 310 RDMIGIAKTGSGKTAAFIWPMLIHIMDQKELEPGDGPIAVIVCPTRELCQQIHSECKRFG 369

Query: 362 KAHGLRVSAVYGGMSKFDQLKELKAGCEIVVATPGRLIDMIKMKAVTMSKATYLVLDEAD 421
           KA+ LR  AVYGG S ++Q K L+ G EIVV TPGRLID +K KA  + + TYLV DEAD
Sbjct: 370 KAYNLRSVAVYGGGSMWEQAKALQEGAEIVVCTPGRLIDHVKKKATNLQRVTYLVFDEAD 429

Query: 422 RMFDLGFEPQIRSIVGQIRPDRQTLLFSATMPRKVEKLAREILTDPVRVTVGEIGMANED 481
           RMFD+GFE Q+RSI   +RPDRQTLLFSAT  +K+EKLAR+IL DP+RV  G+IG ANED
Sbjct: 430 RMFDMGFEYQVRSIASHVRPDRQTLLFSATFRKKIEKLARDILIDPIRVVQGDIGEANED 489

Query: 482 ITQVVHVLPSDLEKLPWLLEKLPEMIDDGDVLVFASKKATVDEIESQLVQKGFKVAALHG 541
           +TQ+V + PS   K  WL  +L E    G VL+F +KKA  +E+ + L Q+   +  LHG
Sbjct: 490 VTQIVEIFPSGPSKWNWLTRRLVEFTSSGSVLLFVTKKANAEELANNLKQEDHNLGLLHG 549

Query: 542 DKDQASRMETLQKFKSGVYHVLIATDVAARGLDIKSIKSVVNFDTAKDMDMHVHRIGRTG 601
           D DQ+ R + + +FK     +L+ATDVAARGLDI SIK+V+N+D A+D+D H HRIGRTG
Sbjct: 550 DMDQSERNKVISEFKKKGIPILVATDVAARGLDIPSIKTVINYDVARDIDTHTHRIGRTG 609

Query: 602 RAGDKDGKAHTLITQKEARFAGELVNSLIAAGQNVSMELMDLAMKDGRFRSKRDARKKG- 661
           RAG+K G A+TL+T K++ FAG+LV +L  A Q+VS EL+DLAM++  FR  R    KG 
Sbjct: 610 RAGEK-GVAYTLLTPKDSNFAGDLVRNLEGANQHVSKELLDLAMQNPWFRKSRFKGGKGK 669

Query: 662 ----GGGGGGGKK--GKGRGGNGRGVRGVDFGMGIGYNPESSS-----TPSTNNVQSR-- 721
               GGGG G ++  G G   + RG           Y P S +     T      QS+  
Sbjct: 670 KPNIGGGGLGYRERPGLGSESSDRGNNNSVMSNYEAYKPSSGAMGDRLTAMKAAFQSQYK 729

Query: 722 ----SAAVNSLRTGMIAQFKSSFVAA---SSAPPSQGSNNSYSVPANRRPTLA-----GF 764
               +A++N+ +TG  A   S + +A   +S P S    N+ +  +    T A     GF
Sbjct: 730 SHFVAASLNNQKTGSSAAGASGWTSAGSLNSVPTSSAQQNAANPDSPIAATAAAKGVPGF 789

[Close]

BLAST of MS018977 vs. ExPASy TrEMBL
Match: A0A6J1DNZ8 (DEAD-box ATP-dependent RNA helicase 24 OS=Momordica charantia OX=3673 GN=LOC111022433 PE=3 SV=1)

HSP 1 Score: 1479.5 bits (3829), Expect = 0.0e+00
Identity = 770/773 (99.61%), Postives = 770/773 (99.61%), Query Frame = 0


Query: 1   MSKRKFGFEGFGINRQTTYNFERSQAPQRLYVPPSSRGHGHDNYEDTDVDNIEYDDNDAE 60
           MSKRKFGFEGFGINRQTTYNFERSQAPQRLYVPPSSRGHGHDNYEDTDVDNIEYDDNDAE
Sbjct: 1   MSKRKFGFEGFGINRQTTYNFERSQAPQRLYVPPSSRGHGHDNYEDTDVDNIEYDDNDAE 60

Query: 61  EASGNGDGGGGDAGDEIDPLDAFMEGIHEEMKAPPPEKPKEKVDKYRDDEEDDPMESFLR 120
           EASGNGDGGGGDAGDEIDPLDAFMEGIHEEMKAPPPEKPKEKVDKYRDDEEDDPMESFLR
Sbjct: 61  EASGNGDGGGGDAGDEIDPLDAFMEGIHEEMKAPPPEKPKEKVDKYRDDEEDDPMESFLR 120

Query: 121 AKKDVGLTLAADALNAGYDSDEEVYAAAKAVDAGMVEYDSDDNLMILEKKKIEPIPALDH 180
           AKKDVGLTLAADALNAGYDSDEEVYAAAKAVDAGMVEYDSDDNLMILEKKKIEPIPALDH
Sbjct: 121 AKKDVGLTLAADALNAGYDSDEEVYAAAKAVDAGMVEYDSDDNLMILEKKKIEPIPALDH 180

Query: 181 SSIDYEPFCKDFYEERASISGMSEEEVSEYRKSLAIRVSGFDVPRPIKTFEDSGFSPQLM 240
           SSIDYEPFCKDFYEERASISGMSEEEVSEYRKSLAIRVSGFDVPRPIKTFEDSG SPQLM
Sbjct: 181 SSIDYEPFCKDFYEERASISGMSEEEVSEYRKSLAIRVSGFDVPRPIKTFEDSGLSPQLM 240

Query: 241 NAIKKQGYEKPTSIQCQAMPIVLSGRDIIGIAKTGSGKTAAFVLPMIVHIMDQPELEKEE 300
           NAIKKQGYEKPTSIQCQAMPIVLSGRDIIGIAKTGSGKTAAFVLPMIVHIMDQPELEKEE
Sbjct: 241 NAIKKQGYEKPTSIQCQAMPIVLSGRDIIGIAKTGSGKTAAFVLPMIVHIMDQPELEKEE 300

Query: 301 GPIGVICAPTRELAHQIYLECKKFSKAHGLRVSAVYGGMSKFDQLKELKAGCEIVVATPG 360
           GPIGVICAPTRELAHQIYLECKKFSKAHGLRVSAVYGGMSKFDQLKELKAGCEIVVATPG
Sbjct: 301 GPIGVICAPTRELAHQIYLECKKFSKAHGLRVSAVYGGMSKFDQLKELKAGCEIVVATPG 360

Query: 361 RLIDMIKMKAVTMSKATYLVLDEADRMFDLGFEPQIRSIVGQIRPDRQTLLFSATMPRKV 420
           RLIDMIKMKAVTMSKATYLVLDEADRMFDLGFEPQIRSIVGQIRPDRQTLLFSATMPRKV
Sbjct: 361 RLIDMIKMKAVTMSKATYLVLDEADRMFDLGFEPQIRSIVGQIRPDRQTLLFSATMPRKV 420

Query: 421 EKLAREILTDPVRVTVGEIGMANEDITQVVHVLPSDLEKLPWLLEKLPEMIDDGDVLVFA 480
           EKLAREILTDPVRVTVGEIGMANEDITQVVHVLPSDLEKLPWLLEKLPEMIDDGDVLVFA
Sbjct: 421 EKLAREILTDPVRVTVGEIGMANEDITQVVHVLPSDLEKLPWLLEKLPEMIDDGDVLVFA 480

Query: 481 SKKATVDEIESQLVQKGFKVAALHGDKDQASRMETLQKFKSGVYHVLIATDVAARGLDIK 540
           SKKATVDEIESQLVQKGFKVAALHGDKDQASRMETLQKFKSGVYHVLIATDVAARGLDIK
Sbjct: 481 SKKATVDEIESQLVQKGFKVAALHGDKDQASRMETLQKFKSGVYHVLIATDVAARGLDIK 540

Query: 541 SIKSVVNFDTAKDMDMHVHRIGRTGRAGDKDGKAHTLITQKEARFAGELVNSLIAAGQNV 600
           SIKSVVNFDTAKDMDMHVHRIGRTGRAGDKDGKAHTLITQKEARFAGELVNSLIAAGQNV
Sbjct: 541 SIKSVVNFDTAKDMDMHVHRIGRTGRAGDKDGKAHTLITQKEARFAGELVNSLIAAGQNV 600

Query: 601 SMELMDLAMKDGRFRSKRDARKKGGGGGGGGKKGKGRGGNGRGVRGVDFGMGIGYNPESS 660
           S ELMDLAMKDGRFRSKRDARKKGGGGGGGGKKGKGRGGNGRGVRGVDFGMGIGYNPESS
Sbjct: 601 STELMDLAMKDGRFRSKRDARKKGGGGGGGGKKGKGRGGNGRGVRGVDFGMGIGYNPESS 660

Query: 661 STPSTNNVQSRSAAVNSLRTGMIAQFKSSFVAASSAPPSQGSNNSYSVPANRRPTLAGFV 720
           STPSTNNVQSRSAAVNSLRTGMIAQFKSSFVAASS PPSQGSNNSYSVPANRRPTLAGFV
Sbjct: 661 STPSTNNVQSRSAAVNSLRTGMIAQFKSSFVAASSTPPSQGSNNSYSVPANRRPTLAGFV 720

Query: 721 SGGSIGGGSNSPTPPASRVNSYAPNAGEYSSQKNSESSSDRPRERRRPSGWDR 774
           SGGSIGGGSNSPTPPASRVNSYAPNAGEYSSQKNSESSSDRPRERRRPSGWDR
Sbjct: 721 SGGSIGGGSNSPTPPASRVNSYAPNAGEYSSQKNSESSSDRPRERRRPSGWDR 773

[Close]

BLAST of MS018977 vs. ExPASy TrEMBL
Match: A0A1S3BY83 (DEAD-box ATP-dependent RNA helicase 24 OS=Cucumis melo OX=3656 GN=LOC103494724 PE=3 SV=1)

HSP 1 Score: 1395.9 bits (3612), Expect = 0.0e+00
Identity = 729/777 (93.82%), Postives = 753/777 (96.91%), Query Frame = 0


Query: 1   MSKRKFGFEGFGINRQTTYNFERSQAPQRLYVPPSSRGHGHDNYEDTDVDNIEYDDNDAE 60
           MSKRKFGFEGFGINRQTTYNFERSQAPQRLYVPPSSRGHGHDNYEDTDVDNIEYDDND E
Sbjct: 1   MSKRKFGFEGFGINRQTTYNFERSQAPQRLYVPPSSRGHGHDNYEDTDVDNIEYDDNDGE 60

Query: 61  EASGNGDGGGGDAG---DEIDPLDAFMEGIHEEMKAPPPEKPKEKVDKYRDDEEDDPMES 120
           EASGN DGG G AG   +EIDPLDAFMEGIHEEMKAPPP KPKEKVDKYRDDEEDDPMES
Sbjct: 61  EASGNDDGGAGAAGAEEEEIDPLDAFMEGIHEEMKAPPPPKPKEKVDKYRDDEEDDPMES 120

Query: 121 FLRAKKDVGLTLAADALNAGYDSDEEVYAAAKAVDAGMVEYDSDDNLMILEKKKIEPIPA 180
           FLRAKKDVGLTLAADAL+AGYDSDEEVYAAAKAVDAGMVEYDSDDN++I+EKKKIEPIPA
Sbjct: 121 FLRAKKDVGLTLAADALHAGYDSDEEVYAAAKAVDAGMVEYDSDDNMLIVEKKKIEPIPA 180

Query: 181 LDHSSIDYEPFCKDFYEERASISGMSEEEVSEYRKSLAIRVSGFDVPRPIKTFEDSGFSP 240
           LDHSSIDYEPF KDFYEE+ASISGMSEEEVSEYRKSLAIRVSGFDVPRPIKTFED GFSP
Sbjct: 181 LDHSSIDYEPFNKDFYEEKASISGMSEEEVSEYRKSLAIRVSGFDVPRPIKTFEDCGFSP 240

Query: 241 QLMNAIKKQGYEKPTSIQCQAMPIVLSGRDIIGIAKTGSGKTAAFVLPMIVHIMDQPELE 300
           QLMNAIKKQGYEKPTSIQCQAMPIVLSG DIIGIAKTGSGKTAAFVLPMIVHIMDQPELE
Sbjct: 241 QLMNAIKKQGYEKPTSIQCQAMPIVLSGGDIIGIAKTGSGKTAAFVLPMIVHIMDQPELE 300

Query: 301 KEEGPIGVICAPTRELAHQIYLECKKFSKAHGLRVSAVYGGMSKFDQLKELKAGCEIVVA 360
           KEEGPIGVICAPTRELAHQIYLECKKFSKAHGLRVSAVYGGMSKFDQLKELKAGCEIVVA
Sbjct: 301 KEEGPIGVICAPTRELAHQIYLECKKFSKAHGLRVSAVYGGMSKFDQLKELKAGCEIVVA 360

Query: 361 TPGRLIDMIKMKAVTMSKATYLVLDEADRMFDLGFEPQIRSIVGQIRPDRQTLLFSATMP 420
           TPGRLIDMIK+KA+TMSKATYLVLDEADRMFDLGFEPQIRSIVGQIRPDRQTLLFSATMP
Sbjct: 361 TPGRLIDMIKLKALTMSKATYLVLDEADRMFDLGFEPQIRSIVGQIRPDRQTLLFSATMP 420

Query: 421 RKVEKLAREILTDPVRVTVGEIGMANEDITQVVHVLPSDLEKLPWLLEKLPEMIDDGDVL 480
           RKVEKLAREILTDPVRVTVGE+GMANEDITQVVHVLPSDLEKLPWLLEKLPEMIDDGDVL
Sbjct: 421 RKVEKLAREILTDPVRVTVGEVGMANEDITQVVHVLPSDLEKLPWLLEKLPEMIDDGDVL 480

Query: 481 VFASKKATVDEIESQLVQKGFKVAALHGDKDQASRMETLQKFKSGVYHVLIATDVAARGL 540
           VFASKKATVDE+ESQL+QKGFKVAALHGDKDQASRMETLQKFKSGVYHVLIATDVAARGL
Sbjct: 481 VFASKKATVDEVESQLLQKGFKVAALHGDKDQASRMETLQKFKSGVYHVLIATDVAARGL 540

Query: 541 DIKSIKSVVNFDTAKDMDMHVHRIGRTGRAGDKDGKAHTLITQKEARFAGELVNSLIAAG 600
           DIKSIKSVVNFD AKDMDMHVHRIGRTGRAGDKDG+AHTLITQKEARFAGELVNSLIAAG
Sbjct: 541 DIKSIKSVVNFDIAKDMDMHVHRIGRTGRAGDKDGRAHTLITQKEARFAGELVNSLIAAG 600

Query: 601 QNVSMELMDLAMKDGRFRSKRDARKKGGGGGGGGKKGKGRGGNGRGVRGVDFGMGIGYNP 660
           QNVS+ELMDLAMKDGRFRSKRDARKK GGGGGGGKKGK RG NGRGVRGVDFG+GIGYNP
Sbjct: 601 QNVSVELMDLAMKDGRFRSKRDARKK-GGGGGGGKKGKSRGSNGRGVRGVDFGLGIGYNP 660

Query: 661 E-SSSTPSTNNVQSRSAAVNSLRTGMIAQFKSSFVAASSAPPSQGSNNSYSVPANRRPTL 720
           E S STPST NVQSRSAAVNSLRTGM+AQFKS+FVAASSAPPSQGS+NSY++PAN+RPTL
Sbjct: 661 EGSGSTPSTTNVQSRSAAVNSLRTGMMAQFKSNFVAASSAPPSQGSSNSYNMPANKRPTL 720

Query: 721 AGFVSGGSIGGGSNSPTPPASRVNSYAPNAGEYSSQKNSESSSDRPRERRRPSGWDR 774
           +GFVSGGSIGGG+NSP PP SR NSY PN  EYSSQKN+ESSSDRPRER+RPSGWDR
Sbjct: 721 SGFVSGGSIGGGANSPAPPVSRGNSYMPNPVEYSSQKNTESSSDRPRERKRPSGWDR 776

[Close]

BLAST of MS018977 vs. ExPASy TrEMBL
Match: A0A0A0KTB5 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G004270 PE=3 SV=1)

HSP 1 Score: 1393.6 bits (3606), Expect = 0.0e+00
Identity = 723/777 (93.05%), Postives = 753/777 (96.91%), Query Frame = 0


Query: 1   MSKRKFGFEGFGINRQTTYNFERSQAPQRLYVPPSSRGHGHDNYEDTDVDNIEYDDNDAE 60
           MSKRKFGFEGFGINRQTTYNFERSQAPQRLYVPPSSRGHGHDNYEDTDVDNIEYDDND E
Sbjct: 1   MSKRKFGFEGFGINRQTTYNFERSQAPQRLYVPPSSRGHGHDNYEDTDVDNIEYDDNDGE 60

Query: 61  EASGNGDGGGGDAG---DEIDPLDAFMEGIHEEMKAPPPEKPKEKVDKYRDDEEDDPMES 120
           EASGN DGG G +G   +EIDPLDAFMEGIHEEMKAPPP KPKEKVDKYRDD+E+DPMES
Sbjct: 61  EASGNADGGAGASGAEEEEIDPLDAFMEGIHEEMKAPPPPKPKEKVDKYRDDDEEDPMES 120

Query: 121 FLRAKKDVGLTLAADALNAGYDSDEEVYAAAKAVDAGMVEYDSDDNLMILEKKKIEPIPA 180
           FLRAKKDVGLTLAADAL+AGYDSDEEVYAAAKAVDAGMVEYDSDDN++I+EKKKIEPIP+
Sbjct: 121 FLRAKKDVGLTLAADALHAGYDSDEEVYAAAKAVDAGMVEYDSDDNMLIVEKKKIEPIPS 180

Query: 181 LDHSSIDYEPFCKDFYEERASISGMSEEEVSEYRKSLAIRVSGFDVPRPIKTFEDSGFSP 240
           LDHSSIDYEPF KDFYEE+ASISGMSEEEVSEYRKSLAIRVSGFDVPRP+KTFED GFSP
Sbjct: 181 LDHSSIDYEPFNKDFYEEKASISGMSEEEVSEYRKSLAIRVSGFDVPRPVKTFEDCGFSP 240

Query: 241 QLMNAIKKQGYEKPTSIQCQAMPIVLSGRDIIGIAKTGSGKTAAFVLPMIVHIMDQPELE 300
           QLMNAIKKQGYEKPTSIQCQAMPIVLSG DIIGIAKTGSGKTAAFVLPMIVHIMDQPELE
Sbjct: 241 QLMNAIKKQGYEKPTSIQCQAMPIVLSGGDIIGIAKTGSGKTAAFVLPMIVHIMDQPELE 300

Query: 301 KEEGPIGVICAPTRELAHQIYLECKKFSKAHGLRVSAVYGGMSKFDQLKELKAGCEIVVA 360
           KEEGPIGVICAPTRELAHQIYLECKKFSKAHGLRVSAVYGGMSKFDQLKELKAGCEIVVA
Sbjct: 301 KEEGPIGVICAPTRELAHQIYLECKKFSKAHGLRVSAVYGGMSKFDQLKELKAGCEIVVA 360

Query: 361 TPGRLIDMIKMKAVTMSKATYLVLDEADRMFDLGFEPQIRSIVGQIRPDRQTLLFSATMP 420
           TPGRLIDMIK+KA+TMSKATYLVLDEADRMFDLGFEPQIRSIVGQIRPDRQTLLFSATMP
Sbjct: 361 TPGRLIDMIKLKALTMSKATYLVLDEADRMFDLGFEPQIRSIVGQIRPDRQTLLFSATMP 420

Query: 421 RKVEKLAREILTDPVRVTVGEIGMANEDITQVVHVLPSDLEKLPWLLEKLPEMIDDGDVL 480
           RKVEKLAREILTDPVRVTVGE+GMANEDITQVVHVLPSDLEKLPWLLEKLPEMIDDGDVL
Sbjct: 421 RKVEKLAREILTDPVRVTVGEVGMANEDITQVVHVLPSDLEKLPWLLEKLPEMIDDGDVL 480

Query: 481 VFASKKATVDEIESQLVQKGFKVAALHGDKDQASRMETLQKFKSGVYHVLIATDVAARGL 540
           VFASKKATVDE+ESQL+QK FKVAALHGDKDQASRMETLQKFKSGVYHVLIATDVAARGL
Sbjct: 481 VFASKKATVDEVESQLLQKSFKVAALHGDKDQASRMETLQKFKSGVYHVLIATDVAARGL 540

Query: 541 DIKSIKSVVNFDTAKDMDMHVHRIGRTGRAGDKDGKAHTLITQKEARFAGELVNSLIAAG 600
           DIKSIKSVVNFD AKDMDMHVHRIGRTGRAGDKDG+AHTLITQKEARFAGELVNSLIAAG
Sbjct: 541 DIKSIKSVVNFDIAKDMDMHVHRIGRTGRAGDKDGRAHTLITQKEARFAGELVNSLIAAG 600

Query: 601 QNVSMELMDLAMKDGRFRSKRDARKKGGGGGGGGKKGKGRGGNGRGVRGVDFGMGIGYNP 660
           QNVS+ELMDLAMKDGRFRSKRDARKKGGGGGGGGKKGK RG NGRGVRGVDFG+GIGYNP
Sbjct: 601 QNVSVELMDLAMKDGRFRSKRDARKKGGGGGGGGKKGKSRGSNGRGVRGVDFGLGIGYNP 660

Query: 661 E-SSSTPSTNNVQSRSAAVNSLRTGMIAQFKSSFVAASSAPPSQGSNNSYSVPANRRPTL 720
           E + STPST NVQSRSAAVNSLRTGM+AQFKS+FVAASSAPP+QGS+NSY+VPAN+RPTL
Sbjct: 661 EGTGSTPSTTNVQSRSAAVNSLRTGMMAQFKSNFVAASSAPPNQGSSNSYNVPANKRPTL 720

Query: 721 AGFVSGGSIGGGSNSPTPPASRVNSYAPNAGEYSSQKNSESSSDRPRERRRPSGWDR 774
           +GFVSGGSIGGG+NSP PP SR NSY PN  EYSSQKN+ESSSDRPRER+RPSGWDR
Sbjct: 721 SGFVSGGSIGGGANSPAPPVSRGNSYMPNPVEYSSQKNTESSSDRPRERKRPSGWDR 777

[Close]

BLAST of MS018977 vs. ExPASy TrEMBL
Match: A0A6J1GB10 (DEAD-box ATP-dependent RNA helicase 24 isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111452364 PE=3 SV=1)

HSP 1 Score: 1390.2 bits (3597), Expect = 0.0e+00
Identity = 728/779 (93.45%), Postives = 753/779 (96.66%), Query Frame = 0


Query: 1   MSKRKFGFEGFGINRQTTYNFERSQAPQRLYVPPSSRGHGHDNYEDTDVDNIEYDDNDAE 60
           MSKRKFGFEGFGINRQTTYNFERSQAPQRLYVPPSSRGHGHDNYEDTDVDNIEYDDN+AE
Sbjct: 1   MSKRKFGFEGFGINRQTTYNFERSQAPQRLYVPPSSRGHGHDNYEDTDVDNIEYDDNEAE 60

Query: 61  EASGNGD---GGGGDAGDEIDPLDAFMEGIHEEMKAPPPEKPKEKVDKYRDDEEDDPMES 120
           EASGNGD   G GG   +EIDPLDAFMEGIHEEM+APPP KPKEKVDKYRD+EEDDPMES
Sbjct: 61  EASGNGDNVAGAGGGEEEEIDPLDAFMEGIHEEMRAPPPPKPKEKVDKYRDEEEDDPMES 120

Query: 121 FLRAKKDVGLTLAADALNAGYDSDEEVYAAAKAVDAGMVEYDSDDNLMILEKKKIEPIPA 180
           FL+AKKDVGLTLAADAL+AGYDSDEEVYAAAKAVDA MVEYDSDDN++I+EKKKIE IPA
Sbjct: 121 FLKAKKDVGLTLAADALHAGYDSDEEVYAAAKAVDAAMVEYDSDDNMLIVEKKKIESIPA 180

Query: 181 LDHSSIDYEPFCKDFYEERASISGMSEEEVSEYRKSLAIRVSGFDVPRPIKTFEDSGFSP 240
           L+HSSIDYEPF KDFYEE+ASISGMSEEEVSEYRK+LAIRVSGFDVPRPIKTFEDSGFSP
Sbjct: 181 LEHSSIDYEPFNKDFYEEKASISGMSEEEVSEYRKNLAIRVSGFDVPRPIKTFEDSGFSP 240

Query: 241 QLMNAIKKQGYEKPTSIQCQAMPIVLSGRDIIGIAKTGSGKTAAFVLPMIVHIMDQPELE 300
           QLMNAIKKQGYEKPTSIQCQAMPIVLSGRDIIGIAKTGSGKTAAFVLPMIVHIMDQPELE
Sbjct: 241 QLMNAIKKQGYEKPTSIQCQAMPIVLSGRDIIGIAKTGSGKTAAFVLPMIVHIMDQPELE 300

Query: 301 KEEGPIGVICAPTRELAHQIYLECKKFSKAHGLRVSAVYGGMSKFDQLKELKAGCEIVVA 360
           KEEGPIGVICAPTRELAHQIYLECKKFSK HGLRVSAVYGGMSKFDQ+KELKAGCEIVVA
Sbjct: 301 KEEGPIGVICAPTRELAHQIYLECKKFSKVHGLRVSAVYGGMSKFDQIKELKAGCEIVVA 360

Query: 361 TPGRLIDMIKMKAVTMSKATYLVLDEADRMFDLGFEPQIRSIVGQIRPDRQTLLFSATMP 420
           TPGRLIDMIKMKA+TMSKATYLVLDEADRMFDLGFEPQIRSIVGQIRPDRQTLLFSATMP
Sbjct: 361 TPGRLIDMIKMKALTMSKATYLVLDEADRMFDLGFEPQIRSIVGQIRPDRQTLLFSATMP 420

Query: 421 RKVEKLAREILTDPVRVTVGEIGMANEDITQVVHVLPSDLEKLPWLLEKLPEMIDDGDVL 480
           RKVEKLAREILTDPVRVTVGE+GMANEDITQVVHVLPSDLEKLPWLLEKLPEMIDDGDVL
Sbjct: 421 RKVEKLAREILTDPVRVTVGEVGMANEDITQVVHVLPSDLEKLPWLLEKLPEMIDDGDVL 480

Query: 481 VFASKKATVDEIESQLVQKGFKVAALHGDKDQASRMETLQKFKSGVYHVLIATDVAARGL 540
           VFASKKATVDEIESQL+QKGFKVAALHGDKDQASRMETLQKFKSGVYH LIATDVAARGL
Sbjct: 481 VFASKKATVDEIESQLLQKGFKVAALHGDKDQASRMETLQKFKSGVYHALIATDVAARGL 540

Query: 541 DIKSIKSVVNFDTAKDMDMHVHRIGRTGRAGDKDGKAHTLITQKEARFAGELVNSLIAAG 600
           DIKSIKSVVNFD AKDMDMHVHRIGRTGRAGD+DGKAHTLITQKEARFAGELVNSLIAAG
Sbjct: 541 DIKSIKSVVNFDIAKDMDMHVHRIGRTGRAGDRDGKAHTLITQKEARFAGELVNSLIAAG 600

Query: 601 QNVSMELMDLAMKDGRFRSKRDARKK-GGGGGGGGKKGKGR-GGNGRGVRGVDFGMGIGY 660
           QNVSMELMDLAMKDGRFRSKRDARKK GGGGGGGGKKGKGR GGNGRGVRGVDFG+GIGY
Sbjct: 601 QNVSMELMDLAMKDGRFRSKRDARKKGGGGGGGGGKKGKGRGGGNGRGVRGVDFGLGIGY 660

Query: 661 NPESS-STPSTNNVQSRSAAVNSLRTGMIAQFKSSFVAASSAPPSQGSNNSYSVPANRRP 720
           NPESS S PSTNNVQSRSAAVNSLRTGM+AQFKSSFVAASSAPPSQGSN+SYS+PAN+RP
Sbjct: 661 NPESSGSNPSTNNVQSRSAAVNSLRTGMMAQFKSSFVAASSAPPSQGSNSSYSMPANKRP 720

Query: 721 TLAGFVSGGSIGGGSNSPTPPASRVNSYAPNAGEYSSQKNSESSSDRPRERRRPSGWDR 774
           TLAGFVSGGSIGGG+N P PP  R NSY PNAGE+SSQKNSESS DR +ERRRPSGWDR
Sbjct: 721 TLAGFVSGGSIGGGANRPPPPPPRANSYVPNAGEFSSQKNSESSGDRSKERRRPSGWDR 779

[Close]

BLAST of MS018977 vs. ExPASy TrEMBL
Match: A0A6J1GA90 (DEAD-box ATP-dependent RNA helicase 24 isoform X2 OS=Cucurbita moschata OX=3662 GN=LOC111452364 PE=3 SV=1)

HSP 1 Score: 1388.6 bits (3593), Expect = 0.0e+00
Identity = 727/778 (93.44%), Postives = 752/778 (96.66%), Query Frame = 0


Query: 1   MSKRKFGFEGFGINRQTTYNFERSQAPQRLYVPPSSRGHGHDNYEDTDVDNIEYDDNDAE 60
           MSKRKFGFEGFGINRQTTYNFERSQAPQRLYVPPSSRGHGHDNYEDTDVDNIEYDDN+AE
Sbjct: 1   MSKRKFGFEGFGINRQTTYNFERSQAPQRLYVPPSSRGHGHDNYEDTDVDNIEYDDNEAE 60

Query: 61  EASGNGD---GGGGDAGDEIDPLDAFMEGIHEEMKAPPPEKPKEKVDKYRDDEEDDPMES 120
           EASGNGD   G GG   +EIDPLDAFMEGIHEEM+APPP KPKEKVDKYRD+EEDDPMES
Sbjct: 61  EASGNGDNVAGAGGGEEEEIDPLDAFMEGIHEEMRAPPPPKPKEKVDKYRDEEEDDPMES 120

Query: 121 FLRAKKDVGLTLAADALNAGYDSDEEVYAAAKAVDAGMVEYDSDDNLMILEKKKIEPIPA 180
           FL+AKKDVGLTLAADAL+AGYDSDEEVYAAAKAVDA MVEYDSDDN++I+EKKKIE IPA
Sbjct: 121 FLKAKKDVGLTLAADALHAGYDSDEEVYAAAKAVDAAMVEYDSDDNMLIVEKKKIESIPA 180

Query: 181 LDHSSIDYEPFCKDFYEERASISGMSEEEVSEYRKSLAIRVSGFDVPRPIKTFEDSGFSP 240
           L+HSSIDYEPF KDFYEE+ASISGMSEEEVSEYRK+LAIRVSGFDVPRPIKTFEDSGFSP
Sbjct: 181 LEHSSIDYEPFNKDFYEEKASISGMSEEEVSEYRKNLAIRVSGFDVPRPIKTFEDSGFSP 240

Query: 241 QLMNAIKKQGYEKPTSIQCQAMPIVLSGRDIIGIAKTGSGKTAAFVLPMIVHIMDQPELE 300
           QLMNAIKKQGYEKPTSIQCQAMPIVLSGRDIIGIAKTGSGKTAAFVLPMIVHIMDQPELE
Sbjct: 241 QLMNAIKKQGYEKPTSIQCQAMPIVLSGRDIIGIAKTGSGKTAAFVLPMIVHIMDQPELE 300

Query: 301 KEEGPIGVICAPTRELAHQIYLECKKFSKAHGLRVSAVYGGMSKFDQLKELKAGCEIVVA 360
           KEEGPIGVICAPTRELAHQIYLECKKFSK HGLRVSAVYGGMSKFDQ+KELKAGCEIVVA
Sbjct: 301 KEEGPIGVICAPTRELAHQIYLECKKFSKVHGLRVSAVYGGMSKFDQIKELKAGCEIVVA 360

Query: 361 TPGRLIDMIKMKAVTMSKATYLVLDEADRMFDLGFEPQIRSIVGQIRPDRQTLLFSATMP 420
           TPGRLIDMIKMKA+TMSKATYLVLDEADRMFDLGFEPQIRSIVGQIRPDRQTLLFSATMP
Sbjct: 361 TPGRLIDMIKMKALTMSKATYLVLDEADRMFDLGFEPQIRSIVGQIRPDRQTLLFSATMP 420

Query: 421 RKVEKLAREILTDPVRVTVGEIGMANEDITQVVHVLPSDLEKLPWLLEKLPEMIDDGDVL 480
           RKVEKLAREILTDPVRVTVGE+GMANEDITQVVHVLPSDLEKLPWLLEKLPEMIDDGDVL
Sbjct: 421 RKVEKLAREILTDPVRVTVGEVGMANEDITQVVHVLPSDLEKLPWLLEKLPEMIDDGDVL 480

Query: 481 VFASKKATVDEIESQLVQKGFKVAALHGDKDQASRMETLQKFKSGVYHVLIATDVAARGL 540
           VFASKKATVDEIESQL+QKGFKVAALHGDKDQASRMETLQKFKSGVYH LIATDVAARGL
Sbjct: 481 VFASKKATVDEIESQLLQKGFKVAALHGDKDQASRMETLQKFKSGVYHALIATDVAARGL 540

Query: 541 DIKSIKSVVNFDTAKDMDMHVHRIGRTGRAGDKDGKAHTLITQKEARFAGELVNSLIAAG 600
           DIKSIKSVVNFD AKDMDMHVHRIGRTGRAGD+DGKAHTLITQKEARFAGELVNSLIAAG
Sbjct: 541 DIKSIKSVVNFDIAKDMDMHVHRIGRTGRAGDRDGKAHTLITQKEARFAGELVNSLIAAG 600

Query: 601 QNVSMELMDLAMKDGRFRSKRDARKKGGGGGGGGKKGKGR-GGNGRGVRGVDFGMGIGYN 660
           QNVSMELMDLAMKDGRFRSKRDARKK GGGGGGGKKGKGR GGNGRGVRGVDFG+GIGYN
Sbjct: 601 QNVSMELMDLAMKDGRFRSKRDARKK-GGGGGGGKKGKGRGGGNGRGVRGVDFGLGIGYN 660

Query: 661 PESS-STPSTNNVQSRSAAVNSLRTGMIAQFKSSFVAASSAPPSQGSNNSYSVPANRRPT 720
           PESS S PSTNNVQSRSAAVNSLRTGM+AQFKSSFVAASSAPPSQGSN+SYS+PAN+RPT
Sbjct: 661 PESSGSNPSTNNVQSRSAAVNSLRTGMMAQFKSSFVAASSAPPSQGSNSSYSMPANKRPT 720

Query: 721 LAGFVSGGSIGGGSNSPTPPASRVNSYAPNAGEYSSQKNSESSSDRPRERRRPSGWDR 774
           LAGFVSGGSIGGG+N P PP  R NSY PNAGE+SSQKNSESS DR +ERRRPSGWDR
Sbjct: 721 LAGFVSGGSIGGGANRPPPPPPRANSYVPNAGEFSSQKNSESSGDRSKERRRPSGWDR 777

[Close]

BLAST of MS018977 vs. TAIR 10
Match: AT2G47330.1 (P-loop containing nucleoside triphosphate hydrolases superfamily protein )

HSP 1 Score: 1102.4 bits (2850), Expect = 0.0e+00
Identity = 585/776 (75.39%), Postives = 672/776 (86.60%), Query Frame = 0


Query: 1   MSKRKFGFEGFGINRQTTYNFERSQAPQRLYVPPSSRGHGHDNYEDTDVDNIEYDDN-DA 60
           MS RKFG EGFGINRQT+Y+FERSQAPQRLYVPPSSR  G DN ED D+DNI+Y +N +A
Sbjct: 1   MSNRKFGMEGFGINRQTSYSFERSQAPQRLYVPPSSR--GGDNSEDADLDNIDYMENEEA 60

Query: 61  E---EASGNGDGGGGDAGDEIDPLDAFMEGIHEEMKAPPPEKPKEKVDKYRDDEEDDPME 120
           E   E  G+    GG+  DEIDPLDAFMEGIH+EMK+ PP KPKEK+++Y+DD +DDP+E
Sbjct: 61  EEDIEEGGSAAASGGEV-DEIDPLDAFMEGIHQEMKSAPPPKPKEKLERYKDD-DDDPVE 120

Query: 121 SFLRAKKDVGLTLAADALNAGYDSDEEVYAAAKAVDAGMVEYDSDDNLMILEKKKIEPIP 180
           S+L+AKKD+GLTLAADALNAGY+SDEEVYAAAKAVDAGM++YDSDDN ++++K+KIEPI 
Sbjct: 121 SYLKAKKDLGLTLAADALNAGYNSDEEVYAAAKAVDAGMLDYDSDDNPIVVDKRKIEPIT 180

Query: 181 ALDHSSIDYEPFCKDFYEERASISGMSEEEVSEYRKSLAIRVSGFDVPRPIKTFEDSGFS 240
           ALDHSSIDYEP  KDFYEE  SISGM+E+E ++YR+ L IRVSGFDV RP+KTFED GFS
Sbjct: 181 ALDHSSIDYEPINKDFYEELESISGMTEQETTDYRQRLGIRVSGFDVHRPVKTFEDCGFS 240

Query: 241 PQLMNAIKKQGYEKPTSIQCQAMPIVLSGRDIIGIAKTGSGKTAAFVLPMIVHIMDQPEL 300
            Q+M+AIKKQ YEKPT+IQCQA+PIVLSGRD+IGIAKTGSGKTAAFVLPMIVHIMDQPEL
Sbjct: 241 SQIMSAIKKQAYEKPTAIQCQALPIVLSGRDVIGIAKTGSGKTAAFVLPMIVHIMDQPEL 300

Query: 301 EKEEGPIGVICAPTRELAHQIYLECKKFSKAHGLRVSAVYGGMSKFDQLKELKAGCEIVV 360
           +++EGPIGVICAPTRELAHQI+LE KKFSKA+GLRVSAVYGGMSK +Q KELKAGCEIVV
Sbjct: 301 QRDEGPIGVICAPTRELAHQIFLEAKKFSKAYGLRVSAVYGGMSKHEQFKELKAGCEIVV 360

Query: 361 ATPGRLIDMIKMKAVTMSKATYLVLDEADRMFDLGFEPQIRSIVGQIRPDRQTLLFSATM 420
           ATPGRLIDM+KMKA+TM +A+YLVLDEADRMFDLGFEPQ+RSIVGQIRPDRQTLLFSATM
Sbjct: 361 ATPGRLIDMLKMKALTMMRASYLVLDEADRMFDLGFEPQVRSIVGQIRPDRQTLLFSATM 420

Query: 421 PRKVEKLAREILTDPVRVTVGEIGMANEDITQVVHVLPSDLEKLPWLLEKLPEMIDDGDV 480
           P KVEKLAREIL+DP+RVTVGE+GMANEDITQVV+V+PSD EKLPWLLEKLP MID+GDV
Sbjct: 421 PWKVEKLAREILSDPIRVTVGEVGMANEDITQVVNVIPSDAEKLPWLLEKLPGMIDEGDV 480

Query: 481 LVFASKKATVDEIESQLVQKGFKVAALHGDKDQASRMETLQKFKSGVYHVLIATDVAARG 540
           LVFASKKATVDEIE+QL    FKVAALHGDKDQASRMETLQKFKSGV+HVLIATDVAARG
Sbjct: 481 LVFASKKATVDEIEAQLTLNSFKVAALHGDKDQASRMETLQKFKSGVHHVLIATDVAARG 540

Query: 541 LDIKSIKSVVNFDTAKDMDMHVHRIGRTGRAGDKDGKAHTLITQKEARFAGELVNSLIAA 600
           LDIKS+K+VVN+D AKDMDMHVHRIGRTGRAGD+DG A+TL+TQ+EARFAGELVNSL+AA
Sbjct: 541 LDIKSLKTVVNYDIAKDMDMHVHRIGRTGRAGDRDGVAYTLVTQREARFAGELVNSLVAA 600

Query: 601 GQNVSMELMDLAMKDGRFRSKRDARKKGGGGGGGGKKGKGRGGNGRGVRGVDFGMGIGYN 660
           GQNV  EL DLAMKDGRF+SKRD RK       GGKKG+G GG  +GVRGVDFG+GIG++
Sbjct: 601 GQNVPPELTDLAMKDGRFKSKRDGRK-------GGKKGRGGGGGNKGVRGVDFGLGIGFS 660

Query: 661 PESSSTPSTNNVQSRSAAVNSLRTGMIAQFKSSFVAASSAPPSQGSNNSYSVPANRRPTL 720
            ESS TPS+    SRS A+NS+RTG++AQFK+SFVAA+   PS   N +Y    N+RP+L
Sbjct: 661 SESSRTPSSKAAPSRSGAINSVRTGVMAQFKNSFVAAT---PSNPQNQAY---PNKRPSL 720

Query: 721 AGFVSGGSIGGGSNSPTPPASRVNSYAPNAGEYSSQKNSESSSDRPRERRRPSGWD 773
            GFVSGG+IGG        A  V      +   SSQ +S+SS +RPRER+R SGWD
Sbjct: 721 MGFVSGGTIGGDMGRTQSQAPPVAPTQNASSHNSSQNHSQSSENRPRERKRRSGWD 759

[Close]

BLAST of MS018977 vs. TAIR 10
Match: AT1G20920.1 (P-loop containing nucleoside triphosphate hydrolases superfamily protein )

HSP 1 Score: 426.4 bits (1095), Expect = 4.9e-119
Identity = 286/692 (41.33%), Postives = 402/692 (58.09%), Query Frame = 0


Query: 46   DTDVDNIEYDDNDAEEASGNGDGGGGDAGDEIDPLDAFMEGIHEEMKAPPPEK-----PK 105
            D D   ++ ++  A   S +G  G  D  +EIDPLDAFM      M  P  EK     P 
Sbjct: 350  DGDAKMVDLENETAATVSESGGDGAVDE-EEIDPLDAFM----NTMVLPEVEKFCNGAPP 409

Query: 106  EKVDKYRDDEEDDPMESFLRAKKDVGLTLAADALNAGYDSDEEVYAAAKAVDAGMVEYDS 165
              V+    D + +  ES  R KK  G   A   +  G DSD + Y+  K  D   ++ D 
Sbjct: 410  PAVNDGTLDSKMNGKESGDRPKK--GFNKALGRIIQGEDSDSD-YSEPKNDDDPSLDEDD 469

Query: 166  DDNLMILEKKKIEPIPALDHSSIDYEPFCKDFYEERASISGMSEEEVSEYRKSLAIRVSG 225
            ++ +  ++K K E +  +DHS I+YEPF K+FY E   IS M++EEV+ YRK L ++V G
Sbjct: 470  EEFMKRVKKTKAEKLSLVDHSKIEYEPFRKNFYIEVKDISRMTQEEVNTYRKELELKVHG 529

Query: 226  FDVPRPIKTFEDSGFSPQLMNAIKKQGYEKPTSIQCQAMPIVLSGRDIIGIAKTGSGKTA 285
             DVPRPIK +  +G + ++++ +KK  YEKP  IQ QA+PI++SGRD IG+AKTGSGKT 
Sbjct: 530  KDVPRPIKFWHQTGLTSKILDTMKKLNYEKPMPIQTQALPIIMSGRDCIGVAKTGSGKTL 589

Query: 286  AFVLPMIVHIMDQPELEKEEGPIGVICAPTRELAHQIYLECKKFSKAHGLRVSAVYGGMS 345
             FVLPM+ HI DQP +E  +GPIG++ APTREL  QI+ + +KFSK  G+R   VYGG  
Sbjct: 590  GFVLPMLRHIKDQPPVEAGDGPIGLVMAPTRELVQQIHSDIRKFSKPLGIRCVPVYGGSG 649

Query: 346  KFDQLKELKAGCEIVVATPGRLIDMI---KMKAVTMSKATYLVLDEADRMFDLGFEPQIR 405
               Q+ ELK G EIVV TPGR+ID++     K   + + T+LV+DEADRMFD+GFEPQI 
Sbjct: 650  VAQQISELKRGTEIVVCTPGRMIDILCTSSGKITNLRRVTFLVMDEADRMFDMGFEPQIT 709

Query: 406  SIVGQIRPDRQTLLFSATMPRKVEKLAREILTDPVRVTVGEIGMANEDITQVVHVLPSDL 465
             I+  IRP+RQT+LFSAT PR+VE LAR++L  PV + VG   + N+DITQ+V V P + 
Sbjct: 710  RIIQNIRPERQTVLFSATFPRQVETLARKVLNKPVEIQVGGRSVVNKDITQLVEVRP-ES 769

Query: 466  EKLPWLLEKLPEMIDDGDVLVFASKKATVDEIESQLVQKGFKVAALHGDKDQASRMETLQ 525
            ++   LLE L E  + G +LVF   +   D +   +++  +   +LHG KDQ  R  T+ 
Sbjct: 770  DRFLRLLELLGEWSEKGKILVFVQSQEKCDALYRDMIKSSYPCLSLHGGKDQTDRESTIS 829

Query: 526  KFKSGVYHVLIATDVAARGLDIKSIKSVVNFDTAKDMDMHVHRIGRTGRAGDKDGKAHTL 585
             FK+ V ++LIAT VAARGLD+K ++ VVNFD     + +VHR+GRTGRAG K G A T 
Sbjct: 830  DFKNDVCNLLIATSVAARGLDVKELELVVNFDAPNHYEDYVHRVGRTGRAGRK-GCAVTF 889

Query: 586  ITQKEARFAGELVNSLIAAGQNVSMELMDLAMKDGRFRSKRDA--RKKGGGGGGGGKKGK 645
            I++ +A++A +LV +L  + Q V  +L  LA  DG     +    +  G G GG G K  
Sbjct: 890  ISEDDAKYAPDLVKALELSEQPVPDDLKALA--DGFMVKVKQGIEQAHGTGYGGSGFKFN 949

Query: 646  GRGGNGRGVRGVDFGMGIGYNPESSSTPSTNNVQSRSAAVNSLRTGMIAQFKSSF--VAA 705
                  R           G+  + S +   N+V  ++        G I+Q +++F  +AA
Sbjct: 950  EEEEEVRKAAKKAQAKEYGFEEDKSDSEDENDVVRKAGG------GEISQQQATFAQIAA 1009

Query: 706  SSAPPSQGSNNSYSVPANRRPTLAGFVSGGSI 726
             +A     +    S P      LA   +GG +
Sbjct: 1010 IAAAAKAAAAAPVSAPVTANQLLA---NGGGL 1020

[Close]

BLAST of MS018977 vs. TAIR 10
Match: AT1G20920.2 (P-loop containing nucleoside triphosphate hydrolases superfamily protein )

HSP 1 Score: 426.4 bits (1095), Expect = 4.9e-119
Identity = 286/692 (41.33%), Postives = 402/692 (58.09%), Query Frame = 0


Query: 46  DTDVDNIEYDDNDAEEASGNGDGGGGDAGDEIDPLDAFMEGIHEEMKAPPPEK-----PK 105
           D D   ++ ++  A   S +G  G  D  +EIDPLDAFM      M  P  EK     P 
Sbjct: 12  DGDAKMVDLENETAATVSESGGDGAVDE-EEIDPLDAFM----NTMVLPEVEKFCNGAPP 71

Query: 106 EKVDKYRDDEEDDPMESFLRAKKDVGLTLAADALNAGYDSDEEVYAAAKAVDAGMVEYDS 165
             V+    D + +  ES  R KK  G   A   +  G DSD + Y+  K  D   ++ D 
Sbjct: 72  PAVNDGTLDSKMNGKESGDRPKK--GFNKALGRIIQGEDSDSD-YSEPKNDDDPSLDEDD 131

Query: 166 DDNLMILEKKKIEPIPALDHSSIDYEPFCKDFYEERASISGMSEEEVSEYRKSLAIRVSG 225
           ++ +  ++K K E +  +DHS I+YEPF K+FY E   IS M++EEV+ YRK L ++V G
Sbjct: 132 EEFMKRVKKTKAEKLSLVDHSKIEYEPFRKNFYIEVKDISRMTQEEVNTYRKELELKVHG 191

Query: 226 FDVPRPIKTFEDSGFSPQLMNAIKKQGYEKPTSIQCQAMPIVLSGRDIIGIAKTGSGKTA 285
            DVPRPIK +  +G + ++++ +KK  YEKP  IQ QA+PI++SGRD IG+AKTGSGKT 
Sbjct: 192 KDVPRPIKFWHQTGLTSKILDTMKKLNYEKPMPIQTQALPIIMSGRDCIGVAKTGSGKTL 251

Query: 286 AFVLPMIVHIMDQPELEKEEGPIGVICAPTRELAHQIYLECKKFSKAHGLRVSAVYGGMS 345
            FVLPM+ HI DQP +E  +GPIG++ APTREL  QI+ + +KFSK  G+R   VYGG  
Sbjct: 252 GFVLPMLRHIKDQPPVEAGDGPIGLVMAPTRELVQQIHSDIRKFSKPLGIRCVPVYGGSG 311

Query: 346 KFDQLKELKAGCEIVVATPGRLIDMI---KMKAVTMSKATYLVLDEADRMFDLGFEPQIR 405
              Q+ ELK G EIVV TPGR+ID++     K   + + T+LV+DEADRMFD+GFEPQI 
Sbjct: 312 VAQQISELKRGTEIVVCTPGRMIDILCTSSGKITNLRRVTFLVMDEADRMFDMGFEPQIT 371

Query: 406 SIVGQIRPDRQTLLFSATMPRKVEKLAREILTDPVRVTVGEIGMANEDITQVVHVLPSDL 465
            I+  IRP+RQT+LFSAT PR+VE LAR++L  PV + VG   + N+DITQ+V V P + 
Sbjct: 372 RIIQNIRPERQTVLFSATFPRQVETLARKVLNKPVEIQVGGRSVVNKDITQLVEVRP-ES 431

Query: 466 EKLPWLLEKLPEMIDDGDVLVFASKKATVDEIESQLVQKGFKVAALHGDKDQASRMETLQ 525
           ++   LLE L E  + G +LVF   +   D +   +++  +   +LHG KDQ  R  T+ 
Sbjct: 432 DRFLRLLELLGEWSEKGKILVFVQSQEKCDALYRDMIKSSYPCLSLHGGKDQTDRESTIS 491

Query: 526 KFKSGVYHVLIATDVAARGLDIKSIKSVVNFDTAKDMDMHVHRIGRTGRAGDKDGKAHTL 585
            FK+ V ++LIAT VAARGLD+K ++ VVNFD     + +VHR+GRTGRAG K G A T 
Sbjct: 492 DFKNDVCNLLIATSVAARGLDVKELELVVNFDAPNHYEDYVHRVGRTGRAGRK-GCAVTF 551

Query: 586 ITQKEARFAGELVNSLIAAGQNVSMELMDLAMKDGRFRSKRDA--RKKGGGGGGGGKKGK 645
           I++ +A++A +LV +L  + Q V  +L  LA  DG     +    +  G G GG G K  
Sbjct: 552 ISEDDAKYAPDLVKALELSEQPVPDDLKALA--DGFMVKVKQGIEQAHGTGYGGSGFKFN 611

Query: 646 GRGGNGRGVRGVDFGMGIGYNPESSSTPSTNNVQSRSAAVNSLRTGMIAQFKSSF--VAA 705
                 R           G+  + S +   N+V  ++        G I+Q +++F  +AA
Sbjct: 612 EEEEEVRKAAKKAQAKEYGFEEDKSDSEDENDVVRKAGG------GEISQQQATFAQIAA 671

Query: 706 SSAPPSQGSNNSYSVPANRRPTLAGFVSGGSI 726
            +A     +    S P      LA   +GG +
Sbjct: 672 IAAAAKAAAAAPVSAPVTANQLLA---NGGGL 682

[Close]

BLAST of MS018977 vs. TAIR 10
Match: AT5G63120.2 (P-loop containing nucleoside triphosphate hydrolases superfamily protein )

HSP 1 Score: 404.4 bits (1038), Expect = 2.0e-112
Identity = 224/457 (49.02%), Postives = 298/457 (65.21%), Query Frame = 0


Query: 188 FCKDFYEERASISGMSEEEVSEYRKSLAIRVSGFDVPRPIKTFEDSGFSPQLMNAIKKQG 247
           F K+FY E  ++  M+E++V+ YR    I V G DVP+P+K F+D+ F   ++ AI K G
Sbjct: 125 FEKNFYVESPTVQAMTEQDVAMYRTERDISVEGRDVPKPMKMFQDANFPDNILEAIAKLG 184

Query: 248 YEKPTSIQCQAMPIVLSGRDIIGIAKTGSGKTAAFVLPMIVHIMDQPELEKEEGPIGVIC 307
           + +PT IQ Q  P+ L GRD+IGIA+TGSGKT A++LP +VH+  QP L +++GPI +I 
Sbjct: 185 FTEPTPIQAQGWPMALKGRDLIGIAETGSGKTLAYLLPALVHVSAQPRLGQDDGPIVLIL 244

Query: 308 APTRELAHQIYLECKKFSKAHGLRVSAVYGGMSKFDQLKELKAGCEIVVATPGRLIDMIK 367
           APTRELA QI  E +KF    G+R + +YGG  K  Q+++L+ G EIV+ATPGRLIDM++
Sbjct: 245 APTRELAVQIQEESRKFGLRSGVRSTCIYGGAPKGPQIRDLRRGVEIVIATPGRLIDMLE 304

Query: 368 MKAVTMSKATYLVLDEADRMFDLGFEPQIRSIVGQIRPDRQTLLFSATMPRKVEKLAREI 427
            +   + + TYLVLDEADRM D+GFEPQIR IV QIRPDRQTLL+SAT PR+VE LAR+ 
Sbjct: 305 CQHTNLKRVTYLVLDEADRMLDMGFEPQIRKIVSQIRPDRQTLLWSATWPREVETLARQF 364

Query: 428 LTDPVRVTVGEIGM-ANEDITQVVHVLPSDLEKLPWLLEKLPEMIDDGDVLVFASKKATV 487
           L DP +  +G   + AN+ I QV+ ++P+  EK   LL  L +++D   +L+F   K   
Sbjct: 365 LRDPYKAIIGSTDLKANQSINQVIEIVPTP-EKYNRLLTLLKQLMDGSKILIFVETKRGC 424

Query: 488 DEIESQLVQKGFKVAALHGDKDQASRMETLQKFKSGVYHVLIATDVAARGLDIKSIKSVV 547
           D++  QL   G+   A+HGDK Q+ R   L +FKSG   ++ ATDVAARGLD+K IK VV
Sbjct: 425 DQVTRQLRMDGWPALAIHGDKTQSERDRVLAEFKSGRSPIMTATDVAARGLDVKDIKCVV 484

Query: 548 NFDTAKDMDMHVHRIGRTGRAGDKDGKAHTLITQKEARFAGELVNSLIAAGQNVSMELMD 607
           N+D    ++ ++HRIGRTGRAG K G A T  T   A+FA ELV  L  AGQ V   L  
Sbjct: 485 NYDFPNTLEDYIHRIGRTGRAGAK-GMAFTFFTHDNAKFARELVKILQEAGQVVPPTLSA 544

Query: 608 LAMKDGRFRSKRDARKKGGGGGGGGKKGKGRGGNGRG 644
           L    G           G GG GGG+  + RGG GRG
Sbjct: 545 LVRSSG----------SGYGGSGGGRNFRPRGG-GRG 568

[Close]

BLAST of MS018977 vs. TAIR 10
Match: AT3G09620.1 (P-loop containing nucleoside triphosphate hydrolases superfamily protein )

HSP 1 Score: 394.4 bits (1012), Expect = 2.1e-109
Identity = 271/655 (41.37%), Postives = 374/655 (57.10%), Query Frame = 0


Query: 48  DVDNIEYDDNDAEEASGNGDGGGGDAGDEIDPLDAFMEGIHEEMKAPPPEKPKEKVDKYR 107
           D   +  ++  A   S NG     D  DEIDPLDAFM      M  P  EK    V    
Sbjct: 223 DAKMVASENETAVTVSENGGDRAADE-DEIDPLDAFM----NTMVLPEVEKLSNIVIDGI 282

Query: 108 DDEEDDPMESFLRAKKDVGLTLAADALNAGYDSDEEVYAAAKAVDAGMVEYDSDDNLMIL 167
            D + +  E+  +AKK      A   +  G DSD + Y+  K+ D   ++ D ++ +  +
Sbjct: 283 LDFKMNGKETGDQAKKGFN-KAALGRIIQGEDSDSD-YSEPKSDDDPSLDEDDEEFMKRV 342

Query: 168 EKKKIEPIPALDHSSIDYEPFCKDFYEERASISGMSEEEVSEYRKSLAIRVSGFDVPRPI 227
           +K K E +  +DHS I+YEPF K+FY E   IS M+++ V+ YRK L ++V G DVPRPI
Sbjct: 343 KKTKAEKLSLVDHSKIEYEPFRKNFYIEVKDISRMTQDAVNAYRKELELKVHGKDVPRPI 402

Query: 228 KTFEDSGFSPQLMNAIKKQGYEKPTSIQCQAMPIVLSGRDIIGIAKTGSGKTAAFVLPMI 287
           + +  +G + ++++ +KK  YEKP  IQ QA+PI++SGRD IG+AKTGSGKT  FVLPM+
Sbjct: 403 QFWHQTGLTSKILDTLKKLNYEKPMPIQAQALPIIMSGRDCIGVAKTGSGKTLGFVLPML 462

Query: 288 VHIMDQPELEKEEGPIGVICAPTRELAHQIYLECKKFSKAHGLRVSAVYGGMSKFDQLKE 347
            HI DQP +E  +GPIG++ APTREL  QIY + +KFSKA G+    VYGG     Q+ E
Sbjct: 463 RHIKDQPPVEAGDGPIGLVMAPTRELVQQIYSDIRKFSKALGIICVPVYGGSGVAQQISE 522

Query: 348 LKAGCEIVVATPGRLIDMI---KMKAVTMSKATYLVLDEADRMFDLGFEPQIRSIVGQIR 407
           LK G EIVV TPGR+ID++     K   + + TYLV+DEADRMFD+GFEPQI  IV  IR
Sbjct: 523 LKRGTEIVVCTPGRMIDILCTSSGKITNLRRVTYLVMDEADRMFDMGFEPQITRIVQNIR 582

Query: 408 PDRQTLLFSATMPRKVEKLAREILTDPVRVTVGEIGMANEDITQVVHVLPSDLEKLPWLL 467
           PDRQT+LFSAT PR+VE LAR++L  PV + VG   + N+DITQ+V + P + E+   LL
Sbjct: 583 PDRQTVLFSATFPRQVETLARKVLNKPVEIQVGGRSVVNKDITQLVEIRP-ESERFSRLL 642

Query: 468 EKLPEMIDDGDVLVFASKKATVDEIESQLVQKGFKVAALHGDKDQASRMETLQKFKSGVY 527
           E L E  + G VLVF                               S+ +++  FKS V 
Sbjct: 643 ELLGEWYEKGKVLVFV-----------------------------RSQEKSISDFKSDVC 702

Query: 528 HVLIATDVAARGLDIKSIKSVVNFDTAKDMDMHVHRIGRTGRAGDKDGKAHTLITQKEAR 587
           ++LIAT VAARGLD+K ++ VVNFD     + +VHR+GRTGRAG K G A T I++ +A+
Sbjct: 703 NLLIATSVAARGLDVKELELVVNFDAPNHYEDYVHRVGRTGRAGRK-GCAVTFISEDDAK 762

Query: 588 FAGELVNSLIAAGQNVSMELMDLAMKDGRFRSKRDA--RKKGGGGGGGGKKGKGRGGNGR 647
           +A +LV +L  + Q V  ++   A+ +G     +    +  G G GG G K        R
Sbjct: 763 YAPDLVKALELSEQPVPDDVK--AVAEGFMAKVKQGIEQAHGTGYGGSGFKFNEEEDEVR 822

Query: 648 GVRGVDFGMGIGYNPESSSTPSTNNVQSRSAAVNSLRTGMIAQFKSSFVAASSAP 698
                      G+  E S +   N+V  ++    S +   +AQ  +   AAS AP
Sbjct: 823 KAAKKAQAKEYGFEEEKSDSEDENDVVRKAGGDISQQQITLAQIAAIASAASKAP 837

The following BLAST results are available for this feature:

BLAST of MS018977 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022155302.1	0.0e+00	99.61	DEAD-box ATP-dependent RNA helicase 24 [Momordica charantia]	[more]
XP_008454276.1	0.0e+00	93.82	PREDICTED: DEAD-box ATP-dependent RNA helicase 24 [Cucumis melo]	[more]
XP_004152219.1	0.0e+00	93.05	DEAD-box ATP-dependent RNA helicase 24 [Cucumis sativus] >KGN52865.1 hypothetica...	[more]
XP_022948804.1	0.0e+00	93.45	DEAD-box ATP-dependent RNA helicase 24 isoform X1 [Cucurbita moschata]	[more]
XP_022948807.1	0.0e+00	93.44	DEAD-box ATP-dependent RNA helicase 24 isoform X2 [Cucurbita moschata]	[more]

BLAST of MS018977 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
O22907	0.0e+00	75.39	DEAD-box ATP-dependent RNA helicase 24 OS=Arabidopsis thaliana OX=3702 GN=RH24 P...	[more]
Q10MH8	5.3e-304	72.84	DEAD-box ATP-dependent RNA helicase 24 OS=Oryza sativa subsp. japonica OX=39947 ...	[more]
Q810A7	3.2e-147	42.79	ATP-dependent RNA helicase DDX42 OS=Mus musculus OX=10090 GN=Ddx42 PE=1 SV=3	[more]
Q86XP3	5.4e-147	42.89	ATP-dependent RNA helicase DDX42 OS=Homo sapiens OX=9606 GN=DDX42 PE=1 SV=1	[more]
Q5F485	7.1e-147	42.56	ATP-dependent RNA helicase DDX42 OS=Gallus gallus OX=9031 GN=DDX42 PE=2 SV=1	[more]

BLAST of MS018977 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1DNZ8	0.0e+00	99.61	DEAD-box ATP-dependent RNA helicase 24 OS=Momordica charantia OX=3673 GN=LOC1110...	[more]
A0A1S3BY83	0.0e+00	93.82	DEAD-box ATP-dependent RNA helicase 24 OS=Cucumis melo OX=3656 GN=LOC103494724 P...	[more]
A0A0A0KTB5	0.0e+00	93.05	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G004270 PE=3 SV=1	[more]
A0A6J1GB10	0.0e+00	93.45	DEAD-box ATP-dependent RNA helicase 24 isoform X1 OS=Cucurbita moschata OX=3662 ...	[more]
A0A6J1GA90	0.0e+00	93.44	DEAD-box ATP-dependent RNA helicase 24 isoform X2 OS=Cucurbita moschata OX=3662 ...	[more]

BLAST of MS018977 vs. TAIR 10


Match Name	E-value	Identity	Description
AT2G47330.1	0.0e+00	75.39	P-loop containing nucleoside triphosphate hydrolases superfamily protein	[more]
AT1G20920.1	4.9e-119	41.33	P-loop containing nucleoside triphosphate hydrolases superfamily protein	[more]
AT1G20920.2	4.9e-119	41.33	P-loop containing nucleoside triphosphate hydrolases superfamily protein	[more]
AT5G63120.2	2.0e-112	49.02	P-loop containing nucleoside triphosphate hydrolases superfamily protein	[more]
AT3G09620.1	2.1e-109	41.37	P-loop containing nucleoside triphosphate hydrolases superfamily protein	[more]

InterPro

Analysis Name: InterPro Annotations of Bitter gourd (TR) v1
Date Performed: 2021-10-25

Position :

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x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR014001	Helicase superfamily 1/2, ATP-binding domain	SMART	SM00487	ultradead3	coord: 247..449 e-value: 4.9E-65 score: 232.1
IPR014001	Helicase superfamily 1/2, ATP-binding domain	PROSITE	PS51192	HELICASE_ATP_BIND_1	coord: 259..434 score: 33.150013
IPR001650	Helicase, C-terminal	SMART	SM00490	helicmild6	coord: 487..568 e-value: 6.3E-31 score: 118.7
IPR001650	Helicase, C-terminal	PFAM	PF00271	Helicase_C	coord: 464..568 e-value: 1.6E-26 score: 92.8
IPR001650	Helicase, C-terminal	PROSITE	PS51194	HELICASE_CTER	coord: 459..608 score: 21.911755
IPR027417	P-loop containing nucleoside triphosphate hydrolase	GENE3D	3.40.50.300		coord: 190..434 e-value: 2.5E-91 score: 307.5
IPR027417	P-loop containing nucleoside triphosphate hydrolase	GENE3D	3.40.50.300		coord: 435..612 e-value: 7.4E-47 score: 160.9
IPR027417	P-loop containing nucleoside triphosphate hydrolase	SUPERFAMILY	52540	P-loop containing nucleoside triphosphate hydrolases	coord: 374..607
IPR027417	P-loop containing nucleoside triphosphate hydrolase	SUPERFAMILY	52540	P-loop containing nucleoside triphosphate hydrolases	coord: 211..437
IPR011545	DEAD/DEAH box helicase domain	PFAM	PF00270	DEAD	coord: 252..423 e-value: 3.5E-52 score: 176.7
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 13..31
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 724..756
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 81..111
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 655..673
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 48..62
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 757..773
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 693..773
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..111
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 613..673
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 693..711
None	No IPR available	PANTHER	PTHR47958	ATP-DEPENDENT RNA HELICASE DBP3	coord: 46..660
None	No IPR available	PANTHER	PTHR47958:SF47	DEAD-BOX ATP-DEPENDENT RNA HELICASE 24	coord: 46..660
None	No IPR available	CDD	cd18787	SF2_C_DEAD	coord: 446..578 e-value: 3.7912E-50 score: 169.995
None	No IPR available	CDD	cd17952	DEADc_DDX42	coord: 239..435 e-value: 5.01631E-131 score: 385.615
IPR000629	ATP-dependent RNA helicase DEAD-box, conserved site	PROSITE	PS00039	DEAD_ATP_HELICASE	coord: 380..388
IPR014014	RNA helicase, DEAD-box type, Q motif	PROSITE	PS51195	Q_MOTIF	coord: 228..256 score: 12.543896

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
MS018977.1	MS018977.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
molecular_function	GO:0005524	ATP binding
molecular_function	GO:0003676	nucleic acid binding
molecular_function	GO:0003724	RNA helicase activity