MS018968 (gene) Bitter gourd (TR) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.TCTATCAACAAAAGCAAGGAAATGGAAGCTGCAGCAGACGAGTTTGTATACAGAATCAGTACATCCAAGGAGTGGGAAGAGTCGCGGAGCGCTGGTCATATCTATGGCGGAGAATTCGACAACGTCTCTGGATTCATTCATCTCAGTAACCTCAATCAGGTTCTATCTCTTATTTAATCCGAATCTCTATTTTCCTGTCGCCATAGAACATCATTCCTCTTTCCACCGACAATGCTACATTCTATCGACGATATAGGAATCCTCATTTCATCTTGCGATGTGATTGATTGTTACTTAGGGTAAACTTTGTCCTCGTTCGTAAATTTTGGTTGACTATATTACAAGTATTCATTAACTTTTTGCTTGCCGACACGAATCGGTTGCGTCAACTTGAAGTTGAAATCTAATTTAGAGACCTTGACTATGGTTTCACCGACATACAATATCAGGCGGTCGCCCTTAAGTCTTTGAAAACCTTCGATTATGAGAGAACTAAAGGTTGAACGAGAAATGATAAGATTATTTAACAGTGAGATCTGGAAACTGGTTTATGTTTGCAGGTCCAGCCAACTTTGCAGAATTTCTTCCAGAATACCAAGGAGGAATTGTATCTCCTTCAGATTGAGGCCAAAAAGGTAGAAGAACACATTTTTCTCTCTCTCTCGTGACTGCAAGGGAGAACATAAGTTTCATGTGATTTTGTACTTCTCCTGATCTTTACATGTGTATACTGTATGGTTTTGATATTTTGATATGATGATCAACTATTACAATGAAAAGTTTAATGAAGACTGCACTTTGAAAAGTATGTTTGTGGGATCCAGCTTGTCCACATCCACGAAACACAATGGATATAGATGTTGACAAATTATATGTTTAACCAAATAACATTGGTTTAAGGCCCTGGTTATACTCGAAGGAACAATCTATGGCTTGTGCGGAAAATGTGTTGAAGAATGTTTTCTAATACTTGCTCCCAAGGGGCAGTCCAGTTGACAAAGGGCTTGGAGTCTGTTGGTTATACTAGCTCAAAGGTCGAATCTTTTGGAGCTTAATACCAAAAATCCTTTATGTTTCCCGAGTCCGGGCCTTGGGATGGGCGCGGGTACCCTTGGGTATATGGGAGCAAAGCTCCGATTCCCAGTTCTAAAAAAAAAGAAGAATGTTTTGTAATGCTTAAGTGGCTTCTTGTATATTTGGAAGTTAGGTTTGTAGTTATTTGGTTTGACCTATGTGAATAATGCATTTAACTCAGTTCATCAATTAGTAGAAATTAGTTGTATGCAATTCATCCATGTAGAATAAGGTGATTTCAGACTTTTTTTAGTCTATTATTTTTCTAAAAAAATTATTATCACAGGGATGTTGTACAGCTTTCTATCCGCCTATTTTTTTTTCCATTCTCCATGTTCTTACATTGCGCTTCTCTATACTTGATATTACATGAGCTTTTTTCTTTGCAGCTTGGTGATGGATTGATTTATGAACTTGTGGATGGTTCCAATAGCTTCCCTCATTTCTATGGTCCTTCTCGAAGCTTCAGCCCTATCCCAATAGATGCAGTAACCAAAGCAGAGAAACTAACTCTTTCTGGTGGTCGATATGCTTGTAGTTTTCTCGAA TCTATCAACAAAAGCAAGGAAATGGAAGCTGCAGCAGACGAGTTTGTATACAGAATCAGTACATCCAAGGAGTGGGAAGAGTCGCGGAGCGCTGGTCATATCTATGGCGGAGAATTCGACAACGTCTCTGGATTCATTCATCTCAGTAACCTCAATCAGGTCCAGCCAACTTTGCAGAATTTCTTCCAGAATACCAAGGAGGAATTGTATCTCCTTCAGATTGAGGCCAAAAAGCTTGGTGATGGATTGATTTATGAACTTGTGGATGGTTCCAATAGCTTCCCTCATTTCTATGGTCCTTCTCGAAGCTTCAGCCCTATCCCAATAGATGCAGTAACCAAAGCAGAGAAACTAACTCTTTCTGGTGGTCGATATGCTTGTAGTTTTCTCGAA TCTATCAACAAAAGCAAGGAAATGGAAGCTGCAGCAGACGAGTTTGTATACAGAATCAGTACATCCAAGGAGTGGGAAGAGTCGCGGAGCGCTGGTCATATCTATGGCGGAGAATTCGACAACGTCTCTGGATTCATTCATCTCAGTAACCTCAATCAGGTCCAGCCAACTTTGCAGAATTTCTTCCAGAATACCAAGGAGGAATTGTATCTCCTTCAGATTGAGGCCAAAAAGCTTGGTGATGGATTGATTTATGAACTTGTGGATGGTTCCAATAGCTTCCCTCATTTCTATGGTCCTTCTCGAAGCTTCAGCCCTATCCCAATAGATGCAGTAACCAAAGCAGAGAAACTAACTCTTTCTGGTGGTCGATATGCTTGTAGTTTTCTCGAA SINKSKEMEAAADEFVYRISTSKEWEESRSAGHIYGGEFDNVSGFIHLSNLNQVQPTLQNFFQNTKEELYLLQIEAKKLGDGLIYELVDGSNSFPHFYGPSRSFSPIPIDAVTKAEKLTLSGGRYACSFLE Homology
BLAST of MS018968 vs. NCBI nr
Match: XP_022157011.1 (uncharacterized protein LOC111023838 [Momordica charantia]) HSP 1 Score: 252.7 bits (644), Expect = 1.8e-63 Identity = 123/124 (99.19%), Postives = 123/124 (99.19%), Query Frame = 0
BLAST of MS018968 vs. NCBI nr
Match: KAG6606920.1 (hypothetical protein SDJN03_00262, partial [Cucurbita argyrosperma subsp. sororia] >KAG7036624.1 hypothetical protein SDJN02_00243 [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 216.1 bits (549), Expect = 1.8e-52 Identity = 103/122 (84.43%), Postives = 112/122 (91.80%), Query Frame = 0
BLAST of MS018968 vs. NCBI nr
Match: XP_038905017.1 (uncharacterized protein LOC120091189 [Benincasa hispida]) HSP 1 Score: 216.1 bits (549), Expect = 1.8e-52 Identity = 103/126 (81.75%), Postives = 112/126 (88.89%), Query Frame = 0
BLAST of MS018968 vs. NCBI nr
Match: XP_022948943.1 (uncharacterized protein LOC111452443 [Cucurbita moschata]) HSP 1 Score: 216.1 bits (549), Expect = 1.8e-52 Identity = 103/122 (84.43%), Postives = 112/122 (91.80%), Query Frame = 0
BLAST of MS018968 vs. NCBI nr
Match: XP_023525461.1 (uncharacterized protein LOC111789057 isoform X1 [Cucurbita pepo subsp. pepo] >XP_023525462.1 uncharacterized protein LOC111789057 isoform X2 [Cucurbita pepo subsp. pepo]) HSP 1 Score: 214.9 bits (546), Expect = 4.1e-52 Identity = 102/122 (83.61%), Postives = 112/122 (91.80%), Query Frame = 0
BLAST of MS018968 vs. ExPASy TrEMBL
Match: A0A6J1DWP8 (uncharacterized protein LOC111023838 OS=Momordica charantia OX=3673 GN=LOC111023838 PE=4 SV=1) HSP 1 Score: 252.7 bits (644), Expect = 8.5e-64 Identity = 123/124 (99.19%), Postives = 123/124 (99.19%), Query Frame = 0
BLAST of MS018968 vs. ExPASy TrEMBL
Match: A0A6J1GAQ2 (uncharacterized protein LOC111452443 OS=Cucurbita moschata OX=3662 GN=LOC111452443 PE=4 SV=1) HSP 1 Score: 216.1 bits (549), Expect = 8.8e-53 Identity = 103/122 (84.43%), Postives = 112/122 (91.80%), Query Frame = 0
BLAST of MS018968 vs. ExPASy TrEMBL
Match: A0A6J1K865 (uncharacterized protein LOC111493116 OS=Cucurbita maxima OX=3661 GN=LOC111493116 PE=4 SV=1) HSP 1 Score: 214.5 bits (545), Expect = 2.6e-52 Identity = 102/122 (83.61%), Postives = 112/122 (91.80%), Query Frame = 0
BLAST of MS018968 vs. ExPASy TrEMBL
Match: A0A5D3DA97 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold237G00710 PE=4 SV=1) HSP 1 Score: 208.0 bits (528), Expect = 2.4e-50 Identity = 99/125 (79.20%), Postives = 109/125 (87.20%), Query Frame = 0
BLAST of MS018968 vs. ExPASy TrEMBL
Match: A0A1S3BHG9 (uncharacterized protein LOC103489901 OS=Cucumis melo OX=3656 GN=LOC103489901 PE=4 SV=1) HSP 1 Score: 208.0 bits (528), Expect = 2.4e-50 Identity = 99/125 (79.20%), Postives = 109/125 (87.20%), Query Frame = 0
BLAST of MS018968 vs. TAIR 10
Match: AT4G01897.1 (unknown protein; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF952 (InterPro:IPR009297); Has 763 Blast hits to 763 proteins in 180 species: Archae - 0; Bacteria - 351; Metazoa - 0; Fungi - 0; Plants - 29; Viruses - 0; Other Eukaryotes - 383 (source: NCBI BLink). ) HSP 1 Score: 158.7 bits (400), Expect = 3.2e-39 Identity = 73/120 (60.83%), Postives = 90/120 (75.00%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Bitter gourd (TR) v1
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
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