MS018893 (gene) Bitter gourd (TR) v1

Overview


Name	MS018893
Type	gene
Organism	Momordica charantia cv. TR (Bitter gourd (TR) v1)
Description	Calmodulin
Location	scaffold89: 239595 .. 239873 (+)
RNA-Seq Expression	MS018893
Synteny	MS018893

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGGAAACAACAGTAGTTTTAATCATAAGCGTGCTGAGGTTTCCTTATCTGAAAAGCAGCTGGAGGAAATTTTCAGGAAATATGATAGGGATAAAGATGGCAACCTCATCAGAGAAGAGTTGACGAAAGCCTTCAGTTTTATGGGTAACAAGCACAAGGCCACCTTCCGAGTCGACGAGGCCCTCCGTGCCGCCGACATCAACGGCGACGGCGTCATAAGTTCGCAGGAGATGAATAAGCTCATTGCCTATGCTAAAAGTCGTAACTATATAAACCCT

mRNA sequence

ATGGGAAACAACAGTAGTTTTAATCATAAGCGTGCTGAGGTTTCCTTATCTGAAAAGCAGCTGGAGGAAATTTTCAGGAAATATGATAGGGATAAAGATGGCAACCTCATCAGAGAAGAGTTGACGAAAGCCTTCAGTTTTATGGGTAACAAGCACAAGGCCACCTTCCGAGTCGACGAGGCCCTCCGTGCCGCCGACATCAACGGCGACGGCGTCATAAGTTCGCAGGAGATGAATAAGCTCATTGCCTATGCTAAAAGTCGTAACTATATAAACCCT

Coding sequence (CDS)

ATGGGAAACAACAGTAGTTTTAATCATAAGCGTGCTGAGGTTTCCTTATCTGAAAAGCAGCTGGAGGAAATTTTCAGGAAATATGATAGGGATAAAGATGGCAACCTCATCAGAGAAGAGTTGACGAAAGCCTTCAGTTTTATGGGTAACAAGCACAAGGCCACCTTCCGAGTCGACGAGGCCCTCCGTGCCGCCGACATCAACGGCGACGGCGTCATAAGTTCGCAGGAGATGAATAAGCTCATTGCCTATGCTAAAAGTCGTAACTATATAAACCCT

Protein sequence

MGNNSSFNHKRAEVSLSEKQLEEIFRKYDRDKDGNLIREELTKAFSFMGNKHKATFRVDEALRAADINGDGVISSQEMNKLIAYAKSRNYINP

Homology

[Close]

BLAST of MS018893 vs. NCBI nr
Match: KAA0060899.1 (putative Calcium-binding EF-hand family protein [Cucumis melo var. makuwa])

HSP 1 Score: 102.4 bits (254), Expect = 2.1e-18
Identity = 52/90 (57.78%), Postives = 67/90 (74.44%), Query Frame = 0


Query: 1  MGNNSSFNHKRAEVSLSEKQLEEIFRKYDRDKDGNLIREELTKAFSFMGNKHKATFRVDE 60
          MGN+ S  +KR  V  SE+QL  +F+ +DRD DGNL +EEL +AF ++G++  + FRV+E
Sbjct: 1  MGNSKSKTYKRVLVPFSEEQLANVFKNHDRDGDGNLTKEELKQAFEYLGSRF-SNFRVEE 60

Query: 61 ALRAADINGDGVISSQEMNKLIAYAKSRNY 91
          ALRAAD NGDGVIS  EM KLI YAK+R Y
Sbjct: 61 ALRAADTNGDGVISMDEMGKLIKYAKTRKY 89

[Close]

BLAST of MS018893 vs. NCBI nr
Match: KAG7020569.1 (hypothetical protein SDJN02_17255, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 98.2 bits (243), Expect = 3.9e-17
Identity = 51/90 (56.67%), Postives = 65/90 (72.22%), Query Frame = 0


Query: 1  MGNNSSFNHKRAEVSLSEKQLEEIFRKYDRDKDGNLIREELTKAFSFMGNKHKATFRVDE 60
          MGN  S N+KR  V  +E+QL  IF+ +DRD DG L +EEL +AF+++G++  ++FRV E
Sbjct: 1  MGNAKSTNYKRVLVPFTEEQLAAIFKSHDRDGDGKLSKEELKQAFNYLGSRF-SSFRVKE 60

Query: 61 ALRAADINGDGVISSQEMNKLIAYAKSRNY 91
          ALRAAD NGDG IS  EMNKLI Y K R Y
Sbjct: 61 ALRAADTNGDGFISMDEMNKLIKYTKGRKY 89

[Close]

BLAST of MS018893 vs. NCBI nr
Match: KAG7029343.1 (Calcium-binding protein CML37, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 97.1 bits (240), Expect = 8.8e-17
Identity = 50/90 (55.56%), Postives = 67/90 (74.44%), Query Frame = 0


Query: 1  MGNNSSFNHKRAEVSLSEKQLEEIFRKYDRDKDGNLIREELTKAFSFMGNKHKATFRVDE 60
          MGN+ S  +KR  V  SE+QL  +F+ +D D DG L +EEL +AF ++G++  ++FRV+E
Sbjct: 1  MGNSKSKTYKRVLVPFSEEQLASVFKNHDGDGDGKLTKEELKQAFDYLGSRF-SSFRVEE 60

Query: 61 ALRAADINGDGVISSQEMNKLIAYAKSRNY 91
          ALRAADI+GDG IS  EM+KLI YAKSR Y
Sbjct: 61 ALRAADIDGDGFISMAEMDKLIQYAKSRKY 89

[Close]

BLAST of MS018893 vs. NCBI nr
Match: KAG6598376.1 (hypothetical protein SDJN03_08154, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 94.7 bits (234), Expect = 4.4e-16
Identity = 49/90 (54.44%), Postives = 65/90 (72.22%), Query Frame = 0


Query: 1  MGNNSSFNHKRAEVSLSEKQLEEIFRKYDRDKDGNLIREELTKAFSFMGNKHKATFRVDE 60
          MGN+ S  +KR  V  SE+QL  +F+ +D D DG L +EEL +AF ++G++  ++FRV+E
Sbjct: 1  MGNSKSKTYKRVLVPFSEEQLASVFKNHDGDGDGKLTKEELKQAFDYLGSRF-SSFRVEE 60

Query: 61 ALRAADINGDGVISSQEMNKLIAYAKSRNY 91
          ALRAAD +GDG IS  EM KLI YAKSR Y
Sbjct: 61 ALRAADTDGDGFISMAEMGKLIQYAKSRKY 89

[Close]

BLAST of MS018893 vs. NCBI nr
Match: KAG6585662.1 (hypothetical protein SDJN03_18395, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 94.7 bits (234), Expect = 4.4e-16
Identity = 48/90 (53.33%), Postives = 67/90 (74.44%), Query Frame = 0


Query: 1  MGNNSSFNHKRAEVSLSEKQLEEIFRKYDRDKDGNLIREELTKAFSFMGNKHKATFRVDE 60
          MGN+ S  +KR  V L+E+QL  IF+ +DRD DG L +EEL +AF+++G++  ++FR DE
Sbjct: 1  MGNSKSKTYKRVLVPLTEEQLAGIFKSHDRDGDGKLTKEELKQAFNYLGSRF-SSFRADE 60

Query: 61 ALRAADINGDGVISSQEMNKLIAYAKSRNY 91
          ALRAAD +GDG I+  EM+KLI Y K+R Y
Sbjct: 61 ALRAADADGDGTINMAEMSKLIQYTKNRKY 89

[Close]

BLAST of MS018893 vs. ExPASy Swiss-Prot
Match: Q9LI84 (Probable calcium-binding protein CML16 OS=Arabidopsis thaliana OX=3702 GN=CML16 PE=2 SV=2)

HSP 1 Score: 54.7 bits (130), Expect = 6.5e-07
Identity = 30/72 (41.67%), Postives = 47/72 (65.28%), Query Frame = 0


Query: 13  EVSLSEKQLEEIFRKYDRDKDGNLIREELTKAFSFMGNKHKATFR-VDEALRAADINGDG 72
           EV ++++QL E+FR +DRD +G++   EL  + + MG  H  T+R + E +  AD NGDG
Sbjct: 80  EVLINQEQLMEVFRSFDRDGNGSITAAELAGSMAKMG--HPLTYRELTEMMTEADSNGDG 139

Query: 73  VISSQEMNKLIA 84
           VIS  E + ++A
Sbjct: 140 VISFNEFSHIMA 149

[Close]

BLAST of MS018893 vs. ExPASy Swiss-Prot
Match: Q39752 (Calmodulin OS=Fagus sylvatica OX=28930 GN=CAMF1 PE=2 SV=3)

HSP 1 Score: 49.3 bits (116), Expect = 2.8e-05
Identity = 26/66 (39.39%), Postives = 43/66 (65.15%), Query Frame = 0


Query: 17  SEKQLEEIFRKYDRDKDGNLIREELTKAFSFMGNKHKATFRVDEALRAADINGDGVISSQ 76
           SE++L+E FR +D+D++G +   EL    + +G   K T  VDE +R AD++GDG I+ +
Sbjct: 82  SEEELKEAFRVFDKDQNGFISAAELRHVMTNLG--EKLTDEVDEMIREADVDGDGQINYE 141

Query: 77  EMNKLI 83
           E  K++
Sbjct: 142 EFVKVM 145

[Close]

BLAST of MS018893 vs. ExPASy Swiss-Prot
Match: P62203 (Calmodulin OS=Plasmodium falciparum (isolate 3D7) OX=36329 GN=PF14_0323 PE=3 SV=2)

HSP 1 Score: 48.9 bits (115), Expect = 3.6e-05
Identity = 27/66 (40.91%), Postives = 41/66 (62.12%), Query Frame = 0


Query: 17  SEKQLEEIFRKYDRDKDGNLIREELTKAFSFMGNKHKATFRVDEALRAADINGDGVISSQ 76
           +E++L E FR +DRD DG +  +EL    + +G K      VDE +R ADI+GDG I+ +
Sbjct: 82  TEEELIEAFRVFDRDGDGYISADELRHVMTNLGEK-LTNEEVDEMIREADIDGDGQINYE 141

Query: 77  EMNKLI 83
           E  K++
Sbjct: 142 EFVKMM 146

[Close]

BLAST of MS018893 vs. ExPASy Swiss-Prot
Match: P24044 (Calmodulin OS=Plasmodium falciparum OX=5833 PE=3 SV=4)

HSP 1 Score: 48.9 bits (115), Expect = 3.6e-05
Identity = 27/66 (40.91%), Postives = 41/66 (62.12%), Query Frame = 0


Query: 17  SEKQLEEIFRKYDRDKDGNLIREELTKAFSFMGNKHKATFRVDEALRAADINGDGVISSQ 76
           +E++L E FR +DRD DG +  +EL    + +G K      VDE +R ADI+GDG I+ +
Sbjct: 82  TEEELIEAFRVFDRDGDGYISADELRHVMTNLGEK-LTNEEVDEMIREADIDGDGQINYE 141

Query: 77  EMNKLI 83
           E  K++
Sbjct: 142 EFVKMM 146

[Close]

BLAST of MS018893 vs. ExPASy Swiss-Prot
Match: P04464 (Calmodulin OS=Triticum aestivum OX=4565 PE=1 SV=3)

HSP 1 Score: 48.9 bits (115), Expect = 3.6e-05
Identity = 26/66 (39.39%), Postives = 42/66 (63.64%), Query Frame = 0


Query: 17  SEKQLEEIFRKYDRDKDGNLIREELTKAFSFMGNKHKATFRVDEALRAADINGDGVISSQ 76
           SE++L+E FR +D+D+DG +   EL    + +G K      VDE +R AD++GDG I+ +
Sbjct: 82  SEEELKEAFRVFDKDQDGFISAAELRHVMTNLGEK-LTDEEVDEMIREADVDGDGQINYE 141

Query: 77  EMNKLI 83
           E  K++
Sbjct: 142 EFVKVM 146

[Close]

BLAST of MS018893 vs. ExPASy TrEMBL
Match: A0A5A7V5B0 (Putative Calcium-binding EF-hand family protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold501G00320 PE=4 SV=1)

HSP 1 Score: 102.4 bits (254), Expect = 1.0e-18
Identity = 52/90 (57.78%), Postives = 67/90 (74.44%), Query Frame = 0


Query: 1  MGNNSSFNHKRAEVSLSEKQLEEIFRKYDRDKDGNLIREELTKAFSFMGNKHKATFRVDE 60
          MGN+ S  +KR  V  SE+QL  +F+ +DRD DGNL +EEL +AF ++G++  + FRV+E
Sbjct: 1  MGNSKSKTYKRVLVPFSEEQLANVFKNHDRDGDGNLTKEELKQAFEYLGSRF-SNFRVEE 60

Query: 61 ALRAADINGDGVISSQEMNKLIAYAKSRNY 91
          ALRAAD NGDGVIS  EM KLI YAK+R Y
Sbjct: 61 ALRAADTNGDGVISMDEMGKLIKYAKTRKY 89

[Close]

BLAST of MS018893 vs. ExPASy TrEMBL
Match: A0A0A0LRB6 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G357340 PE=4 SV=1)

HSP 1 Score: 100.1 bits (248), Expect = 5.0e-18
Identity = 51/90 (56.67%), Postives = 66/90 (73.33%), Query Frame = 0


Query: 1  MGNNSSFNHKRAEVSLSEKQLEEIFRKYDRDKDGNLIREELTKAFSFMGNKHKATFRVDE 60
          MGN+ S  +KR  V  SE+QL  +F+ +DRD DG+L +EEL +AF ++G++    FRV+E
Sbjct: 1  MGNSKSKTYKRVLVPFSEEQLANVFKNHDRDGDGHLTKEELKQAFEYLGSRF-CNFRVEE 60

Query: 61 ALRAADINGDGVISSQEMNKLIAYAKSRNY 91
          ALRAAD NGDGVIS  EM KLI YAK+R Y
Sbjct: 61 ALRAADTNGDGVISMDEMGKLIKYAKTRKY 89

[Close]

BLAST of MS018893 vs. ExPASy TrEMBL
Match: A0A0A0LL93 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G357850 PE=4 SV=1)

HSP 1 Score: 77.4 bits (189), Expect = 3.5e-11
Identity = 41/72 (56.94%), Postives = 54/72 (75.00%), Query Frame = 0


Query: 15 SLSEKQLEEIFRKYDRDKDGNLIREELTKAFSFMGNKHKATFRVDEALRAADINGDGVIS 74
          SLSE+QL  IF+K+D D+D  L +EELT+AF+++G++  A  RV EA+RA D N DGVIS
Sbjct: 7  SLSEEQLAWIFKKHDIDRDRKLTKEELTRAFNYLGSRWTA-LRVKEAIRAVDANHDGVIS 66

Query: 75 SQEMNKLIAYAK 87
            EM+KLI Y K
Sbjct: 67 LDEMSKLIVYVK 77

[Close]

BLAST of MS018893 vs. ExPASy TrEMBL
Match: A0A5A7V219 (Putative calcium-binding protein CML10 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold501G00300 PE=4 SV=1)

HSP 1 Score: 76.3 bits (186), Expect = 7.8e-11
Identity = 41/72 (56.94%), Postives = 52/72 (72.22%), Query Frame = 0


Query: 15  SLSEKQLEEIFRKYDRDKDGNLIREELTKAFSFMGNKHKATFRVDEALRAADINGDGVIS 74
           SLSE+QL  IF+K+D D+D  L +EEL +AF ++G++  A  RV  ALRA D NGDGVIS
Sbjct: 41  SLSEEQLAWIFKKHDIDRDRKLTKEELARAFDYLGSRWTAR-RVKGALRAVDANGDGVIS 100

Query: 75  SQEMNKLIAYAK 87
             EM+KLI Y K
Sbjct: 101 MDEMSKLIVYVK 111

[Close]

BLAST of MS018893 vs. ExPASy TrEMBL
Match: A0A1R3HWY3 (Calcium-binding EF-hand OS=Corchorus olitorius OX=93759 GN=COLO4_26488 PE=4 SV=1)

HSP 1 Score: 73.2 bits (178), Expect = 6.6e-10
Identity = 39/84 (46.43%), Postives = 57/84 (67.86%), Query Frame = 0


Query: 7  FNHKRAEVSLSEKQLEEIFRKYDRDKDGNLIREELTKAFSFMGNKHKATFRVDEALRAAD 66
          F  K A + L+E+QL++IF+ +D +KDG L +EEL+ AF  MG  H    +V+ A++ AD
Sbjct: 4  FVSKSASIKLTEEQLKKIFKDHDSNKDGRLSKEELSSAFRKMG-YHNPGRKVNRAMKHAD 63

Query: 67 INGDGVISSQEMNKLIAYAKSRNY 91
          IN DGVI  +E++KL  YA S+ Y
Sbjct: 64 INKDGVIDLEELDKLAKYAVSQGY 86

[Close]

BLAST of MS018893 vs. TAIR 10
Match: AT3G25600.1 (Calcium-binding EF-hand family protein )

HSP 1 Score: 54.7 bits (130), Expect = 4.7e-08
Identity = 30/72 (41.67%), Postives = 47/72 (65.28%), Query Frame = 0


Query: 13  EVSLSEKQLEEIFRKYDRDKDGNLIREELTKAFSFMGNKHKATFR-VDEALRAADINGDG 72
           EV ++++QL E+FR +DRD +G++   EL  + + MG  H  T+R + E +  AD NGDG
Sbjct: 80  EVLINQEQLMEVFRSFDRDGNGSITAAELAGSMAKMG--HPLTYRELTEMMTEADSNGDG 139

Query: 73  VISSQEMNKLIA 84
           VIS  E + ++A
Sbjct: 140 VISFNEFSHIMA 149

[Close]

BLAST of MS018893 vs. TAIR 10
Match: AT1G18530.1 (EF hand calcium-binding protein family )

HSP 1 Score: 47.8 bits (112), Expect = 5.7e-06
Identity = 29/72 (40.28%), Postives = 44/72 (61.11%), Query Frame = 0


Query: 13  EVSLSEKQLEEIFRKYDRDKDGNLIREELTKAFSFMGNKHKATFR-VDEALRAADINGDG 72
           EV ++ +QL EIF+ +DRD +G +   EL  A + MG     T++ + E ++ AD NGDG
Sbjct: 75  EVLINSEQLLEIFKSFDRDGNGFISAAELAGAMAKMG--QPLTYKELTEMIKEADTNGDG 134

Query: 73  VISSQEMNKLIA 84
           VIS  E   ++A
Sbjct: 135 VISFGEFASIMA 144

[Close]

BLAST of MS018893 vs. TAIR 10
Match: AT5G21274.1 (calmodulin 6 )

HSP 1 Score: 47.4 bits (111), Expect = 7.4e-06
Identity = 25/66 (37.88%), Postives = 43/66 (65.15%), Query Frame = 0


Query: 17  SEKQLEEIFRKYDRDKDGNLIREELTKAFSFMGNKHKATFRVDEALRAADINGDGVISSQ 76
           SE++L+E FR +D+D++G +   EL    + +G K  +   VDE +R AD++GDG I+ +
Sbjct: 82  SEEELKEAFRVFDKDQNGFISAAELRHVMTNLGEK-LSDEEVDEMIREADVDGDGQINYE 141

Query: 77  EMNKLI 83
           E  K++
Sbjct: 142 EFVKVM 146

[Close]

BLAST of MS018893 vs. TAIR 10
Match: AT3G43810.1 (calmodulin 7 )

HSP 1 Score: 47.0 bits (110), Expect = 9.7e-06
Identity = 25/66 (37.88%), Postives = 42/66 (63.64%), Query Frame = 0


Query: 17  SEKQLEEIFRKYDRDKDGNLIREELTKAFSFMGNKHKATFRVDEALRAADINGDGVISSQ 76
           SE++L+E FR +D+D++G +   EL    + +G K      VDE +R AD++GDG I+ +
Sbjct: 82  SEEELKEAFRVFDKDQNGFISAAELRHVMTNLGEK-LTDEEVDEMIREADVDGDGQINYE 141

Query: 77  EMNKLI 83
           E  K++
Sbjct: 142 EFVKVM 146

[Close]

BLAST of MS018893 vs. TAIR 10
Match: AT1G66410.1 (calmodulin 4 )

HSP 1 Score: 46.2 bits (108), Expect = 1.7e-05
Identity = 25/73 (34.25%), Postives = 46/73 (63.01%), Query Frame = 0


Query: 10  KRAEVSLSEKQLEEIFRKYDRDKDGNLIREELTKAFSFMGNKHKATFRVDEALRAADING 69
           K+ + + SE++L+E FR +D+D++G +   EL    + +G K      V+E +R AD++G
Sbjct: 75  KKMKDTDSEEELKEAFRVFDKDQNGFISAAELRHVMTNLGEK-LTDEEVEEMIREADVDG 134

Query: 70  DGVISSQEMNKLI 83
           DG I+ +E  K++
Sbjct: 135 DGQINYEEFVKIM 146

The following BLAST results are available for this feature:

BLAST of MS018893 vs. NCBI nr


Match Name	E-value	Identity	Description
KAA0060899.1	2.1e-18	57.78	putative Calcium-binding EF-hand family protein [Cucumis melo var. makuwa]	[more]
KAG7020569.1	3.9e-17	56.67	hypothetical protein SDJN02_17255, partial [Cucurbita argyrosperma subsp. argyro...	[more]
KAG7029343.1	8.8e-17	55.56	Calcium-binding protein CML37, partial [Cucurbita argyrosperma subsp. argyrosper...	[more]
KAG6598376.1	4.4e-16	54.44	hypothetical protein SDJN03_08154, partial [Cucurbita argyrosperma subsp. sorori...	[more]
KAG6585662.1	4.4e-16	53.33	hypothetical protein SDJN03_18395, partial [Cucurbita argyrosperma subsp. sorori...	[more]

BLAST of MS018893 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9LI84	6.5e-07	41.67	Probable calcium-binding protein CML16 OS=Arabidopsis thaliana OX=3702 GN=CML16 ...	[more]
Q39752	2.8e-05	39.39	Calmodulin OS=Fagus sylvatica OX=28930 GN=CAMF1 PE=2 SV=3	[more]
P62203	3.6e-05	40.91	Calmodulin OS=Plasmodium falciparum (isolate 3D7) OX=36329 GN=PF14_0323 PE=3 SV=...	[more]
P24044	3.6e-05	40.91	Calmodulin OS=Plasmodium falciparum OX=5833 PE=3 SV=4	[more]
P04464	3.6e-05	39.39	Calmodulin OS=Triticum aestivum OX=4565 PE=1 SV=3	[more]

BLAST of MS018893 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5A7V5B0	1.0e-18	57.78	Putative Calcium-binding EF-hand family protein OS=Cucumis melo var. makuwa OX=1...	[more]
A0A0A0LRB6	5.0e-18	56.67	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G357340 PE=4 SV=1	[more]
A0A0A0LL93	3.5e-11	56.94	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G357850 PE=4 SV=1	[more]
A0A5A7V219	7.8e-11	56.94	Putative calcium-binding protein CML10 OS=Cucumis melo var. makuwa OX=1194695 GN...	[more]
A0A1R3HWY3	6.6e-10	46.43	Calcium-binding EF-hand OS=Corchorus olitorius OX=93759 GN=COLO4_26488 PE=4 SV=1	[more]

BLAST of MS018893 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G25600.1	4.7e-08	41.67	Calcium-binding EF-hand family protein	[more]
AT1G18530.1	5.7e-06	40.28	EF hand calcium-binding protein family	[more]
AT5G21274.1	7.4e-06	37.88	calmodulin 6	[more]
AT3G43810.1	9.7e-06	37.88	calmodulin 7	[more]
AT1G66410.1	1.7e-05	34.25	calmodulin 4	[more]

InterPro

Analysis Name: InterPro Annotations of Bitter gourd (TR) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR002048	EF-hand domain	SMART	SM00054	efh_1	coord: 20..48 e-value: 0.85 score: 18.3 coord: 57..85 e-value: 0.79 score: 18.6
IPR002048	EF-hand domain	PFAM	PF13499	EF-hand_7	coord: 18..82 e-value: 8.6E-10 score: 38.9
IPR002048	EF-hand domain	PROSITE	PS50222	EF_HAND_2	coord: 16..51 score: 14.987627
IPR002048	EF-hand domain	PROSITE	PS50222	EF_HAND_2	coord: 53..88 score: 10.468573
IPR002048	EF-hand domain	CDD	cd00051	EFh	coord: 20..83 e-value: 4.01097E-10 score: 49.0833
None	No IPR available	GENE3D	1.10.238.10		coord: 1..89 e-value: 7.2E-16 score: 60.6
None	No IPR available	PANTHER	PTHR10891	EF-HAND CALCIUM-BINDING DOMAIN CONTAINING PROTEIN	coord: 8..85
None	No IPR available	PANTHER	PTHR10891:SF911	SUBFAMILY NOT NAMED	coord: 8..85
IPR018247	EF-Hand 1, calcium-binding site	PROSITE	PS00018	EF_HAND_1	coord: 66..78
IPR011992	EF-hand domain pair	SUPERFAMILY	47473	EF-hand	coord: 7..82

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
MS018893.1	MS018893.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
molecular_function	GO:0005509	calcium ion binding