MS018871 (gene) Bitter gourd (TR) v1

Overview


Name	MS018871
Type	gene
Organism	Momordica charantia cv. TR (Bitter gourd (TR) v1)
Description	Mannose-P-dolichol utilization defect 1 protein homolog
Location	scaffold89: 13222 .. 15525 (-)
RNA-Seq Expression	MS018871
Synteny	MS018871

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGAGTTTTTTGGAATGGATTTCAGCTGTGTTTACGGATCTCTAAGCCACGGCAAGTTCCCGGAGAAAGACTGTTTGCTACCTCTTATCTCCAAGCTCCTCGGCTATTGCATTATAGCCGCTTCGACCACCGTCAAACTTCCTCAGGCAAGCTCTACTCTTCCCCTCCTTTCGCCGAGTCGATTTGTTCGAATTTATCGAGGGAAATGTGATGGGATCCATTTCTTTGATCCCTACCATCCGTAATCAATGTTCTTCTGGGTTGTGTTCTCGAGTTTCGGCTTGACCTCTATTTTGTGCGAAGCAATTTAAGACTCTTAGAATCTTTGTGAACAAAGTTTATGTTGTATTAAGTGGGAGTTTATCAGAAGTTGCTTTAGGTTGCATCAATATAGTAATAAACGAACATTGGTCACCTTATTAGGCAGTAATTTAAAGCTTTGCAGCCTGTAGCTTAGAATCGCAACACGCTCTAAGTCTAACTTGGTACTAAATTGTTTTCTTGAACTTATGTCAATAACCTTGGAAGATCCCCGCCCTCCCTTTTGACTCAAATTGTTTGTTTGTTAATTTTTGTCTTCCAGTTCAGCGTTTCCGCCTGAATAATTTTTTTACTCGTCTTTAATATGCATTCTGCGATGAGAAAGTGGCCCCTTATTCCATTTCGTTGTGGATATTTAACATCATGTCATCATTGTAAAGCAAGATTTCTTTCTGCAGATATTGAAGATCTTGAAGCATCAGAGTGTCAGAGGACTTAGTGTTATATCCTTTGAGCTAGAAGTCGTAGGTTACACCATTGCTCTGGCATATTGTGTCCACAAAGGACTTCCATTTTCAGCTTATGGGGAACTGGCATTTCTCTTGGTTCAAGGTATATTGGAAACTACTGAAAATTGCTGGCACTGTGACCTTTTTTCTGGGGAATATCATTTATAAAATACATTACTGATAAAAGTTGAAACATAAATTGGTCAAATTGGGAAGAAATAAAGTGATTTTGATGATTATAATGGTATTATTATTATTCTCAACTTAATTTAAGGTTGTGAATTGAGTGGGTTGCTGGCTGAGATGATGAATTACAGCATACTACTATTAATGTTAGTCTATCAATGTCATCTGACGTCCTATACATAATTGTGATAAGTCTATGGGTGGTGAGTTGATTGATAAAAATATGAATACAGTTGTATTTTACGCAAACACCGGACGCCCTTGGTCTACGAGAAGACAGTAAAAATTTTCTTCGAACCTACACTTCAATTGATACAAGCTACTCCTACTACACTATGTCAAGCAGTGTTATAGCATAGGTCATTCAGGTTAATAGTTCGTATTCTAATTTCTAGTTGTCTTTTGTTAAGGTTGGTTAATAGATATCTTCCTGGCCGCAGACCTATACTTAACTTGATTTTAGTTATTACCCAAAGGATAACTTTTTTGCTTCTGAATAAAATATTGAATTACTAGCTCTTCCCATTCCCTACACCATTCTGTTACTGTTGGTTCTATGTAATGCAAGTTAAAATATATCACTGAAATAGATCCGTTAGTCTGTATTAAATCAGGTTTTTCATGATAATGGAACAAAATGGAATTGATTGAATTAGATAATCCAACTCTTAGTTTTGATTTTCCCATCGTGCCAGGTTGCATATCCAGAACCATGTTATATACTTGCTTGAATTTTTTTTACTGAAATAAATGGATGTTTTTTGCCATAAATGATTGACATTTTTTTGTCTCTCTTTTTTTTCTTTTTTGCCACAGCTATAATTTTGGTTGCCGTTATCTACTATTACTCTCAGCCTATTGGTATGACAACGTGGATGAGGGCACTACTGTATCCTATTTGTTTTGGACTAGTTCAGATCGTGCTTGTTTTTAGTCGCATTATTTAAATAATGAGAAACTTGTAACTTGCTGCCTTAACACGGTGGTTATTCAGATATTGTGCTGTAGCACCAACAGTTTTAGCTGGTCAAATCAATCCTGTTCTATTTGAAGCTCTATATGTAAGTCTCATGCTGTTTTATTAAGATCATCACTTAATCTATATTTTAAGCTTTCTTGTAAAATTTTCTTTAGCTTCTTTACTGTCTATCAGTAATTTTTCTGATCCTCCTCAAATAAGTTACATAAATGAAGAAAAATTGAAGACTTAAATTTACGTTTACTTAGGTTTTTCTCCTATAAATAGCTCTATACTTAAACTTTACCAATTTGGAAACTACCTTTCAGGCATCTCAACATGCAATTTTTCTCTTCTCGAGGATCCCACAAATATGGAAGAACTTTTCT

mRNA sequence

ATGGAGTTTTTTGGAATGGATTTCAGCTGTGTTTACGGATCTCTAAGCCACGGCAAGTTCCCGGAGAAAGACTGTTTGCTACCTCTTATCTCCAAGCTCCTCGGCTATTGCATTATAGCCGCTTCGACCACCGTCAAACTTCCTCAGGCAAGCTCTACTCTTCCCCTCCTTTCGCCGAGTCGATTTATATTGAAGATCTTGAAGCATCAGAGTGTCAGAGGACTTAGTGTTATATCCTTTGAGCTAGAAGTCGTAGGTTACACCATTGCTCTGGCATATTGTGTCCACAAAGGACTTCCATTTTCAGCTTATGGGGAACTGGCATTTCTCTTGGTTCAAGCTATAATTTTGGTTGCCGTTATCTACTATTACTCTCAGCCTATTGGTATGACAACGTGGATGAGGGCACTACTATATTGTGCTGTAGCACCAACAGTTTTAGCTGGTCAAATCAATCCTGTTCTATTTGAAGCTCTATATGCATCTCAACATGCAATTTTTCTCTTCTCGAGGATCCCACAAATATGGAAGAACTTTTCT

Coding sequence (CDS)

ATGGAGTTTTTTGGAATGGATTTCAGCTGTGTTTACGGATCTCTAAGCCACGGCAAGTTCCCGGAGAAAGACTGTTTGCTACCTCTTATCTCCAAGCTCCTCGGCTATTGCATTATAGCCGCTTCGACCACCGTCAAACTTCCTCAGGCAAGCTCTACTCTTCCCCTCCTTTCGCCGAGTCGATTTATATTGAAGATCTTGAAGCATCAGAGTGTCAGAGGACTTAGTGTTATATCCTTTGAGCTAGAAGTCGTAGGTTACACCATTGCTCTGGCATATTGTGTCCACAAAGGACTTCCATTTTCAGCTTATGGGGAACTGGCATTTCTCTTGGTTCAAGCTATAATTTTGGTTGCCGTTATCTACTATTACTCTCAGCCTATTGGTATGACAACGTGGATGAGGGCACTACTATATTGTGCTGTAGCACCAACAGTTTTAGCTGGTCAAATCAATCCTGTTCTATTTGAAGCTCTATATGCATCTCAACATGCAATTTTTCTCTTCTCGAGGATCCCACAAATATGGAAGAACTTTTCT

Protein sequence

MEFFGMDFSCVYGSLSHGKFPEKDCLLPLISKLLGYCIIAASTTVKLPQASSTLPLLSPSRFILKILKHQSVRGLSVISFELEVVGYTIALAYCVHKGLPFSAYGELAFLLVQAIILVAVIYYYSQPIGMTTWMRALLYCAVAPTVLAGQINPVLFEALYASQHAIFLFSRIPQIWKNFS

Homology

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BLAST of MS018871 vs. NCBI nr
Match: XP_022132026.1 (mannose-P-dolichol utilization defect 1 protein homolog 2 [Momordica charantia])

HSP 1 Score: 322.0 bits (824), Expect = 3.2e-84
Identity = 167/180 (92.78%), Postives = 167/180 (92.78%), Query Frame = 0


Query: 1   MEFFGMDFSCVYGSLSHGKFPEKDCLLPLISKLLGYCIIAASTTVKLPQASSTLPLLSPS 60
           MEFFGMDFSCVYGSLSHGKFPEKDCLLPLISKLLGYCIIAASTTVKLPQ           
Sbjct: 1   MEFFGMDFSCVYGSLSHGKFPEKDCLLPLISKLLGYCIIAASTTVKLPQ----------- 60

Query: 61  RFILKILKHQSVRGLSVISFELEVVGYTIALAYCVHKGLPFSAYGELAFLLVQAIILVAV 120
             ILKILKHQSVRGLSVISFELEVVGYTIALAYCVHKGLPFSAYGELAFLLVQAIILVAV
Sbjct: 61  --ILKILKHQSVRGLSVISFELEVVGYTIALAYCVHKGLPFSAYGELAFLLVQAIILVAV 120

Query: 121 IYYYSQPIGMTTWMRALLYCAVAPTVLAGQINPVLFEALYASQHAIFLFSRIPQIWKNFS 180
           IYYYSQPIGMTTWMRALLYCAVAPTVLAGQINPVLFEALYASQHAIFLFSRIPQIWKNFS
Sbjct: 121 IYYYSQPIGMTTWMRALLYCAVAPTVLAGQINPVLFEALYASQHAIFLFSRIPQIWKNFS 167

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BLAST of MS018871 vs. NCBI nr
Match: XP_004142876.1 (mannose-P-dolichol utilization defect 1 protein homolog 2 [Cucumis sativus] >XP_008444595.1 PREDICTED: mannose-P-dolichol utilization defect 1 protein homolog 2 [Cucumis melo] >ADN33725.1 mannose-P-dolichol utilization defect 1 protein [Cucumis melo subsp. melo] >KGN62483.1 hypothetical protein Csa_018783 [Cucumis sativus])

HSP 1 Score: 314.3 bits (804), Expect = 6.8e-82
Identity = 161/180 (89.44%), Postives = 166/180 (92.22%), Query Frame = 0


Query: 1   MEFFGMDFSCVYGSLSHGKFPEKDCLLPLISKLLGYCIIAASTTVKLPQASSTLPLLSPS 60
           MEFFGMDFSCV+GSLSHGKFPEKDCLLPLISKLLGYCI+AASTTVKLPQ           
Sbjct: 1   MEFFGMDFSCVFGSLSHGKFPEKDCLLPLISKLLGYCIVAASTTVKLPQ----------- 60

Query: 61  RFILKILKHQSVRGLSVISFELEVVGYTIALAYCVHKGLPFSAYGELAFLLVQAIILVAV 120
             I+KILKHQSVRGLSVISFELEVVGYTIALAYCVHKGLPFSAYGELAFLLVQAIILVAV
Sbjct: 61  --IMKILKHQSVRGLSVISFELEVVGYTIALAYCVHKGLPFSAYGELAFLLVQAIILVAV 120

Query: 121 IYYYSQPIGMTTWMRALLYCAVAPTVLAGQINPVLFEALYASQHAIFLFSRIPQIWKNFS 180
           IYYYSQPIGM TW+RALLYCA+APTVLAGQINPVLFEALYASQHAIFLFSRIPQIWKNFS
Sbjct: 121 IYYYSQPIGMKTWIRALLYCALAPTVLAGQINPVLFEALYASQHAIFLFSRIPQIWKNFS 167

[Close]

BLAST of MS018871 vs. NCBI nr
Match: XP_038886542.1 (mannose-P-dolichol utilization defect 1 protein homolog 2 [Benincasa hispida])

HSP 1 Score: 314.3 bits (804), Expect = 6.8e-82
Identity = 161/180 (89.44%), Postives = 166/180 (92.22%), Query Frame = 0


Query: 1   MEFFGMDFSCVYGSLSHGKFPEKDCLLPLISKLLGYCIIAASTTVKLPQASSTLPLLSPS 60
           MEFFGMDFSCV+GSLSHGKFPEKDCLLPLISKLLGYCI+AASTTVKLPQ           
Sbjct: 1   MEFFGMDFSCVFGSLSHGKFPEKDCLLPLISKLLGYCIVAASTTVKLPQ----------- 60

Query: 61  RFILKILKHQSVRGLSVISFELEVVGYTIALAYCVHKGLPFSAYGELAFLLVQAIILVAV 120
             I+KILKHQSVRGLSVISFELEVVGYTIALAYCVHKGLPFSAYGELAFLLVQAIILVAV
Sbjct: 61  --IMKILKHQSVRGLSVISFELEVVGYTIALAYCVHKGLPFSAYGELAFLLVQAIILVAV 120

Query: 121 IYYYSQPIGMTTWMRALLYCAVAPTVLAGQINPVLFEALYASQHAIFLFSRIPQIWKNFS 180
           IYYYSQPIGM TW+RALLYCA+APTVLAGQINPVLFEALYASQHAIFLFSRIPQIWKNFS
Sbjct: 121 IYYYSQPIGMKTWIRALLYCALAPTVLAGQINPVLFEALYASQHAIFLFSRIPQIWKNFS 167

[Close]

BLAST of MS018871 vs. NCBI nr
Match: KAG7020593.1 (Mannose-P-dolichol utilization defect 1 protein-like 2, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 312.8 bits (800), Expect = 2.0e-81
Identity = 163/188 (86.70%), Postives = 172/188 (91.49%), Query Frame = 0


Query: 1   MEFFGMDFSCVYGSLSHGKFPEKDCLLPLISKLLGYCIIAASTTVKLPQASST--LPLLS 60
           MEFFGMDFSCV+GSLS GKFPEK+CLLPLISKLLGYCI+AASTTVKLPQAS +  LPL  
Sbjct: 54  MEFFGMDFSCVFGSLSDGKFPEKNCLLPLISKLLGYCIVAASTTVKLPQASFSLFLPLAG 113

Query: 61  PSRF------ILKILKHQSVRGLSVISFELEVVGYTIALAYCVHKGLPFSAYGELAFLLV 120
              F      I+KILKHQSVRGLSV+SFELEVVGYTIALAYCVHKGLPFSAYGELAFLLV
Sbjct: 114 VYLFEFIEGNIMKILKHQSVRGLSVLSFELEVVGYTIALAYCVHKGLPFSAYGELAFLLV 173

Query: 121 QAIILVAVIYYYSQPIGMTTWMRALLYCAVAPTVLAGQINPVLFEALYASQHAIFLFSRI 180
           QAIILVAV+YYYSQPIGMTTW +ALLYCA+APTVLAGQINPVLFEALYASQHAIFLFSRI
Sbjct: 174 QAIILVAVMYYYSQPIGMTTWFKALLYCALAPTVLAGQINPVLFEALYASQHAIFLFSRI 233

[Close]

BLAST of MS018871 vs. NCBI nr
Match: XP_023001966.1 (mannose-P-dolichol utilization defect 1 protein homolog 2 [Cucurbita maxima] >XP_023538232.1 mannose-P-dolichol utilization defect 1 protein homolog 2-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 308.9 bits (790), Expect = 2.8e-80
Identity = 158/180 (87.78%), Postives = 165/180 (91.67%), Query Frame = 0


Query: 1   MEFFGMDFSCVYGSLSHGKFPEKDCLLPLISKLLGYCIIAASTTVKLPQASSTLPLLSPS 60
           MEFFGMDFSCV+GSLS GKFPEK+CLLPLISKLLGYCI+AASTTVKLPQ           
Sbjct: 1   MEFFGMDFSCVFGSLSDGKFPEKNCLLPLISKLLGYCIVAASTTVKLPQ----------- 60

Query: 61  RFILKILKHQSVRGLSVISFELEVVGYTIALAYCVHKGLPFSAYGELAFLLVQAIILVAV 120
             I+KILKHQSVRGLSV+SFELEVVGYTIALAYCVHKGLPFSAYGELAFLLVQAIILVAV
Sbjct: 61  --IMKILKHQSVRGLSVLSFELEVVGYTIALAYCVHKGLPFSAYGELAFLLVQAIILVAV 120

Query: 121 IYYYSQPIGMTTWMRALLYCAVAPTVLAGQINPVLFEALYASQHAIFLFSRIPQIWKNFS 180
           IYYYSQPIGMTTW +ALLYCA+APTVLAGQINPVLFEALYASQHAIFLFSRIPQIWKNFS
Sbjct: 121 IYYYSQPIGMTTWFKALLYCALAPTVLAGQINPVLFEALYASQHAIFLFSRIPQIWKNFS 167

[Close]

BLAST of MS018871 vs. ExPASy Swiss-Prot
Match: Q8VY63 (Mannose-P-dolichol utilization defect 1 protein homolog 2 OS=Arabidopsis thaliana OX=3702 GN=At4g07390 PE=2 SV=1)

HSP 1 Score: 270.8 bits (691), Expect = 1.1e-71
Identity = 132/179 (73.74%), Postives = 155/179 (86.59%), Query Frame = 0


Query: 1   MEFFGMDFSCVYGSLSHGKFPEKDCLLPLISKLLGYCIIAASTTVKLPQASSTLPLLSPS 60
           M++ G+D SC  GSL +G FPEKDCLLPLISKLLGYC++AAS TVKLPQ           
Sbjct: 1   MDYLGIDMSCAIGSLRNGDFPEKDCLLPLISKLLGYCLVAASITVKLPQ----------- 60

Query: 61  RFILKILKHQSVRGLSVISFELEVVGYTIALAYCVHKGLPFSAYGELAFLLVQAIILVAV 120
             I+KI++H+SVRGLSV++FELEVVGYTI+LAYC+HKGLPFSA+GE+AFLL+QA+ILVA 
Sbjct: 61  --IMKIVQHKSVRGLSVVAFELEVVGYTISLAYCLHKGLPFSAFGEMAFLLIQALILVAC 120

Query: 121 IYYYSQPIGMTTWMRALLYCAVAPTVLAGQINPVLFEALYASQHAIFLFSRIPQIWKNF 180
           IYYYSQP+ +TTW+R LLYCAVAPTVLAGQINP LFEALYASQHAIFLF+R+PQIWKNF
Sbjct: 121 IYYYSQPVPVTTWIRPLLYCAVAPTVLAGQINPTLFEALYASQHAIFLFARLPQIWKNF 166

[Close]

BLAST of MS018871 vs. ExPASy Swiss-Prot
Match: Q9LTI3 (Mannose-P-dolichol utilization defect 1 protein homolog 1 OS=Arabidopsis thaliana OX=3702 GN=At5g59470 PE=2 SV=1)

HSP 1 Score: 238.4 bits (607), Expect = 6.2e-62
Identity = 117/179 (65.36%), Postives = 149/179 (83.24%), Query Frame = 0


Query: 1   MEFFGMDFSCVYGSLSHGKFPEKDCLLPLISKLLGYCIIAASTTVKLPQASSTLPLLSPS 60
           M++ G+D SC  GSL +G+FP KDCLLPLISKLLGY ++AAS TVKLPQ           
Sbjct: 1   MDYLGIDLSCAIGSLRNGEFPAKDCLLPLISKLLGYFLVAASMTVKLPQ----------- 60

Query: 61  RFILKILKHQSVRGLSVISFELEVVGYTIALAYCVHKGLPFSAYGELAFLLVQAIILVAV 120
             I+KI+ ++SV+GLSV++FELEV+GYTI+LAYC++K LPFSA+GELAFLL+QA+ILVA 
Sbjct: 61  --IMKIVDNKSVKGLSVVAFELEVIGYTISLAYCLNKDLPFSAFGELAFLLIQALILVAC 120

Query: 121 IYYYSQPIGMTTWMRALLYCAVAPTVLAGQINPVLFEALYASQHAIFLFSRIPQIWKNF 180
           IYY+SQP+ +TTW++A+LY A+APTV AG+I+P LFEALYAS+H IFL +RIPQIWKNF
Sbjct: 121 IYYFSQPLSVTTWVKAILYFAIAPTVFAGKIDPFLFEALYASKHLIFLSARIPQIWKNF 166

[Close]

BLAST of MS018871 vs. ExPASy Swiss-Prot
Match: Q60441 (Mannose-P-dolichol utilization defect 1 protein OS=Cricetulus griseus OX=10029 GN=MPDU1 PE=2 SV=2)

HSP 1 Score: 61.6 bits (148), Expect = 1.0e-08
Identity = 50/138 (36.23%), Postives = 68/138 (49.28%), Query Frame = 0


Query: 17  HGKFPEKDCLLPLISKLLGYCIIAASTTVKLPQASSTLPLLSPSRFILKILKHQSVRGLS 76
           H  F    CL  L+SK LG  I+A S  VKLPQ             I KIL  +S  GLS
Sbjct: 29  HWDFLHVPCLKILLSKGLGLGIVAGSLLVKLPQ-------------IFKILGAKSAEGLS 88

Query: 77  VISFELEVVGYTIALAYCVHKGLPFSAYGELAFLLVQAIILVAVIYYYSQPIGMTTWMRA 136
           + S  LE+V  T  + Y +    PFS++GE  FL +Q I +  ++ +Y    G T    A
Sbjct: 89  LQSVMLELVALTGTVIYSITNNFPFSSWGEALFLTLQTITICLLVLHYR---GDTVKGVA 148

Query: 137 LLYCAVAPTVLAGQINPV 155
           LL C    T+L   ++P+
Sbjct: 149 LLACYA--TLLLALLSPL 148

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BLAST of MS018871 vs. ExPASy Swiss-Prot
Match: O75352 (Mannose-P-dolichol utilization defect 1 protein OS=Homo sapiens OX=9606 GN=MPDU1 PE=1 SV=2)

HSP 1 Score: 59.7 bits (143), Expect = 3.9e-08
Identity = 52/157 (33.12%), Postives = 75/157 (47.77%), Query Frame = 0


Query: 25  CLLPLISKLLGYCIIAASTTVKLPQASSTLPLLSPSRFILKILKHQSVRGLSVISFELEV 84
           CL  L+SK LG  I+A S  VKLPQ             + KIL  +S  GLS+ S  LE+
Sbjct: 37  CLKILLSKGLGLGIVAGSLLVKLPQ-------------VFKILGAKSAEGLSLQSVMLEL 96

Query: 85  VGYTIALAYCVHKGLPFSAYGELAFLLVQAIILVAVIYYYSQPIGMTTWMRALLYC-AVA 144
           V  T  + Y +    PFS++GE  FL++Q I +  ++ +Y    G T    A L C  + 
Sbjct: 97  VALTGTMVYSITNNFPFSSWGEALFLMLQTITICFLVMHYR---GQTVKGVAFLACYGLV 156

Query: 145 PTVLAGQINPV-LFEALYASQHAIFLFSRIPQIWKNF 180
             VL   + P+ +   L AS     +  R+ Q   N+
Sbjct: 157 LLVLLSPLTPLTVVTLLQASNVPAVVVGRLLQAATNY 177

[Close]

BLAST of MS018871 vs. ExPASy Swiss-Prot
Match: Q9R0Q9 (Mannose-P-dolichol utilization defect 1 protein OS=Mus musculus OX=10090 GN=Mpdu1 PE=1 SV=1)

HSP 1 Score: 55.1 bits (131), Expect = 9.7e-07
Identity = 49/157 (31.21%), Postives = 74/157 (47.13%), Query Frame = 0


Query: 25  CLLPLISKLLGYCIIAASTTVKLPQASSTLPLLSPSRFILKILKHQSVRGLSVISFELEV 84
           CL  L+SK LG  I+A S  VKLPQ             + K+L  +S  GLS+ S  LE+
Sbjct: 37  CLKILLSKGLGLGIVAGSLLVKLPQ-------------VFKLLGAKSAEGLSLQSVMLEL 96

Query: 85  VGYTIALAYCVHKGLPFSAYGELAFLLVQAIILVAVIYYYSQPIGMTTWMRALLYC-AVA 144
           V  T  + Y +    PFS++GE  FL +Q + +  ++ +Y    G T    A L C A+ 
Sbjct: 97  VALTGTVVYSITNNFPFSSWGEALFLTLQTVAICFLVMHYR---GETVKGVAFLACYAMV 156

Query: 145 PTVLAGQINPV-LFEALYASQHAIFLFSRIPQIWKNF 180
              L   + P+ +   L AS     +  ++ Q   N+
Sbjct: 157 LLALLSPLTPLAVVTLLQASNVPAVVVGKLLQAATNY 177

[Close]

BLAST of MS018871 vs. ExPASy TrEMBL
Match: A0A6J1BR33 (Mannose-P-dolichol utilization defect 1 protein homolog OS=Momordica charantia OX=3673 GN=LOC111004997 PE=3 SV=1)

HSP 1 Score: 322.0 bits (824), Expect = 1.6e-84
Identity = 167/180 (92.78%), Postives = 167/180 (92.78%), Query Frame = 0


Query: 1   MEFFGMDFSCVYGSLSHGKFPEKDCLLPLISKLLGYCIIAASTTVKLPQASSTLPLLSPS 60
           MEFFGMDFSCVYGSLSHGKFPEKDCLLPLISKLLGYCIIAASTTVKLPQ           
Sbjct: 1   MEFFGMDFSCVYGSLSHGKFPEKDCLLPLISKLLGYCIIAASTTVKLPQ----------- 60

Query: 61  RFILKILKHQSVRGLSVISFELEVVGYTIALAYCVHKGLPFSAYGELAFLLVQAIILVAV 120
             ILKILKHQSVRGLSVISFELEVVGYTIALAYCVHKGLPFSAYGELAFLLVQAIILVAV
Sbjct: 61  --ILKILKHQSVRGLSVISFELEVVGYTIALAYCVHKGLPFSAYGELAFLLVQAIILVAV 120

Query: 121 IYYYSQPIGMTTWMRALLYCAVAPTVLAGQINPVLFEALYASQHAIFLFSRIPQIWKNFS 180
           IYYYSQPIGMTTWMRALLYCAVAPTVLAGQINPVLFEALYASQHAIFLFSRIPQIWKNFS
Sbjct: 121 IYYYSQPIGMTTWMRALLYCAVAPTVLAGQINPVLFEALYASQHAIFLFSRIPQIWKNFS 167

[Close]

BLAST of MS018871 vs. ExPASy TrEMBL
Match: E5GB83 (Mannose-P-dolichol utilization defect 1 protein homolog OS=Cucumis melo subsp. melo OX=412675 PE=3 SV=1)

HSP 1 Score: 314.3 bits (804), Expect = 3.3e-82
Identity = 161/180 (89.44%), Postives = 166/180 (92.22%), Query Frame = 0


Query: 1   MEFFGMDFSCVYGSLSHGKFPEKDCLLPLISKLLGYCIIAASTTVKLPQASSTLPLLSPS 60
           MEFFGMDFSCV+GSLSHGKFPEKDCLLPLISKLLGYCI+AASTTVKLPQ           
Sbjct: 1   MEFFGMDFSCVFGSLSHGKFPEKDCLLPLISKLLGYCIVAASTTVKLPQ----------- 60

Query: 61  RFILKILKHQSVRGLSVISFELEVVGYTIALAYCVHKGLPFSAYGELAFLLVQAIILVAV 120
             I+KILKHQSVRGLSVISFELEVVGYTIALAYCVHKGLPFSAYGELAFLLVQAIILVAV
Sbjct: 61  --IMKILKHQSVRGLSVISFELEVVGYTIALAYCVHKGLPFSAYGELAFLLVQAIILVAV 120

Query: 121 IYYYSQPIGMTTWMRALLYCAVAPTVLAGQINPVLFEALYASQHAIFLFSRIPQIWKNFS 180
           IYYYSQPIGM TW+RALLYCA+APTVLAGQINPVLFEALYASQHAIFLFSRIPQIWKNFS
Sbjct: 121 IYYYSQPIGMKTWIRALLYCALAPTVLAGQINPVLFEALYASQHAIFLFSRIPQIWKNFS 167

[Close]

BLAST of MS018871 vs. ExPASy TrEMBL
Match: A0A0A0LL56 (Mannose-P-dolichol utilization defect 1 protein homolog OS=Cucumis sativus OX=3659 GN=Csa_2G356080 PE=3 SV=1)

HSP 1 Score: 314.3 bits (804), Expect = 3.3e-82
Identity = 161/180 (89.44%), Postives = 166/180 (92.22%), Query Frame = 0


Query: 1   MEFFGMDFSCVYGSLSHGKFPEKDCLLPLISKLLGYCIIAASTTVKLPQASSTLPLLSPS 60
           MEFFGMDFSCV+GSLSHGKFPEKDCLLPLISKLLGYCI+AASTTVKLPQ           
Sbjct: 1   MEFFGMDFSCVFGSLSHGKFPEKDCLLPLISKLLGYCIVAASTTVKLPQ----------- 60

Query: 61  RFILKILKHQSVRGLSVISFELEVVGYTIALAYCVHKGLPFSAYGELAFLLVQAIILVAV 120
             I+KILKHQSVRGLSVISFELEVVGYTIALAYCVHKGLPFSAYGELAFLLVQAIILVAV
Sbjct: 61  --IMKILKHQSVRGLSVISFELEVVGYTIALAYCVHKGLPFSAYGELAFLLVQAIILVAV 120

Query: 121 IYYYSQPIGMTTWMRALLYCAVAPTVLAGQINPVLFEALYASQHAIFLFSRIPQIWKNFS 180
           IYYYSQPIGM TW+RALLYCA+APTVLAGQINPVLFEALYASQHAIFLFSRIPQIWKNFS
Sbjct: 121 IYYYSQPIGMKTWIRALLYCALAPTVLAGQINPVLFEALYASQHAIFLFSRIPQIWKNFS 167

[Close]

BLAST of MS018871 vs. ExPASy TrEMBL
Match: A0A1S3BBF5 (Mannose-P-dolichol utilization defect 1 protein homolog OS=Cucumis melo OX=3656 GN=LOC103487866 PE=3 SV=1)

HSP 1 Score: 314.3 bits (804), Expect = 3.3e-82
Identity = 161/180 (89.44%), Postives = 166/180 (92.22%), Query Frame = 0


Query: 1   MEFFGMDFSCVYGSLSHGKFPEKDCLLPLISKLLGYCIIAASTTVKLPQASSTLPLLSPS 60
           MEFFGMDFSCV+GSLSHGKFPEKDCLLPLISKLLGYCI+AASTTVKLPQ           
Sbjct: 1   MEFFGMDFSCVFGSLSHGKFPEKDCLLPLISKLLGYCIVAASTTVKLPQ----------- 60

Query: 61  RFILKILKHQSVRGLSVISFELEVVGYTIALAYCVHKGLPFSAYGELAFLLVQAIILVAV 120
             I+KILKHQSVRGLSVISFELEVVGYTIALAYCVHKGLPFSAYGELAFLLVQAIILVAV
Sbjct: 61  --IMKILKHQSVRGLSVISFELEVVGYTIALAYCVHKGLPFSAYGELAFLLVQAIILVAV 120

Query: 121 IYYYSQPIGMTTWMRALLYCAVAPTVLAGQINPVLFEALYASQHAIFLFSRIPQIWKNFS 180
           IYYYSQPIGM TW+RALLYCA+APTVLAGQINPVLFEALYASQHAIFLFSRIPQIWKNFS
Sbjct: 121 IYYYSQPIGMKTWIRALLYCALAPTVLAGQINPVLFEALYASQHAIFLFSRIPQIWKNFS 167

[Close]

BLAST of MS018871 vs. ExPASy TrEMBL
Match: A0A6J1KK36 (Mannose-P-dolichol utilization defect 1 protein homolog OS=Cucurbita maxima OX=3661 GN=LOC111495988 PE=3 SV=1)

HSP 1 Score: 308.9 bits (790), Expect = 1.4e-80
Identity = 158/180 (87.78%), Postives = 165/180 (91.67%), Query Frame = 0


Query: 1   MEFFGMDFSCVYGSLSHGKFPEKDCLLPLISKLLGYCIIAASTTVKLPQASSTLPLLSPS 60
           MEFFGMDFSCV+GSLS GKFPEK+CLLPLISKLLGYCI+AASTTVKLPQ           
Sbjct: 1   MEFFGMDFSCVFGSLSDGKFPEKNCLLPLISKLLGYCIVAASTTVKLPQ----------- 60

Query: 61  RFILKILKHQSVRGLSVISFELEVVGYTIALAYCVHKGLPFSAYGELAFLLVQAIILVAV 120
             I+KILKHQSVRGLSV+SFELEVVGYTIALAYCVHKGLPFSAYGELAFLLVQAIILVAV
Sbjct: 61  --IMKILKHQSVRGLSVLSFELEVVGYTIALAYCVHKGLPFSAYGELAFLLVQAIILVAV 120

Query: 121 IYYYSQPIGMTTWMRALLYCAVAPTVLAGQINPVLFEALYASQHAIFLFSRIPQIWKNFS 180
           IYYYSQPIGMTTW +ALLYCA+APTVLAGQINPVLFEALYASQHAIFLFSRIPQIWKNFS
Sbjct: 121 IYYYSQPIGMTTWFKALLYCALAPTVLAGQINPVLFEALYASQHAIFLFSRIPQIWKNFS 167

[Close]

BLAST of MS018871 vs. TAIR 10
Match: AT4G07390.1 (Mannose-P-dolichol utilization defect 1 protein )

HSP 1 Score: 270.8 bits (691), Expect = 8.0e-73
Identity = 132/179 (73.74%), Postives = 155/179 (86.59%), Query Frame = 0


Query: 1   MEFFGMDFSCVYGSLSHGKFPEKDCLLPLISKLLGYCIIAASTTVKLPQASSTLPLLSPS 60
           M++ G+D SC  GSL +G FPEKDCLLPLISKLLGYC++AAS TVKLPQ           
Sbjct: 1   MDYLGIDMSCAIGSLRNGDFPEKDCLLPLISKLLGYCLVAASITVKLPQ----------- 60

Query: 61  RFILKILKHQSVRGLSVISFELEVVGYTIALAYCVHKGLPFSAYGELAFLLVQAIILVAV 120
             I+KI++H+SVRGLSV++FELEVVGYTI+LAYC+HKGLPFSA+GE+AFLL+QA+ILVA 
Sbjct: 61  --IMKIVQHKSVRGLSVVAFELEVVGYTISLAYCLHKGLPFSAFGEMAFLLIQALILVAC 120

Query: 121 IYYYSQPIGMTTWMRALLYCAVAPTVLAGQINPVLFEALYASQHAIFLFSRIPQIWKNF 180
           IYYYSQP+ +TTW+R LLYCAVAPTVLAGQINP LFEALYASQHAIFLF+R+PQIWKNF
Sbjct: 121 IYYYSQPVPVTTWIRPLLYCAVAPTVLAGQINPTLFEALYASQHAIFLFARLPQIWKNF 166

[Close]

BLAST of MS018871 vs. TAIR 10
Match: AT5G59470.1 (Mannose-P-dolichol utilization defect 1 protein )

HSP 1 Score: 238.4 bits (607), Expect = 4.4e-63
Identity = 117/179 (65.36%), Postives = 149/179 (83.24%), Query Frame = 0


Query: 1   MEFFGMDFSCVYGSLSHGKFPEKDCLLPLISKLLGYCIIAASTTVKLPQASSTLPLLSPS 60
           M++ G+D SC  GSL +G+FP KDCLLPLISKLLGY ++AAS TVKLPQ           
Sbjct: 1   MDYLGIDLSCAIGSLRNGEFPAKDCLLPLISKLLGYFLVAASMTVKLPQ----------- 60

Query: 61  RFILKILKHQSVRGLSVISFELEVVGYTIALAYCVHKGLPFSAYGELAFLLVQAIILVAV 120
             I+KI+ ++SV+GLSV++FELEV+GYTI+LAYC++K LPFSA+GELAFLL+QA+ILVA 
Sbjct: 61  --IMKIVDNKSVKGLSVVAFELEVIGYTISLAYCLNKDLPFSAFGELAFLLIQALILVAC 120

Query: 121 IYYYSQPIGMTTWMRALLYCAVAPTVLAGQINPVLFEALYASQHAIFLFSRIPQIWKNF 180
           IYY+SQP+ +TTW++A+LY A+APTV AG+I+P LFEALYAS+H IFL +RIPQIWKNF
Sbjct: 121 IYYFSQPLSVTTWVKAILYFAIAPTVFAGKIDPFLFEALYASKHLIFLSARIPQIWKNF 166

[Close]

BLAST of MS018871 vs. TAIR 10
Match: AT5G59470.2 (Mannose-P-dolichol utilization defect 1 protein )

HSP 1 Score: 188.0 bits (476), Expect = 6.8e-48
Identity = 93/148 (62.84%), Postives = 121/148 (81.76%), Query Frame = 0


Query: 1   MEFFGMDFSCVYGSLSHGKFPEKDCLLPLISKLLGYCIIAASTTVKLPQASSTLPLLSPS 60
           M++ G+D SC  GSL +G+FP KDCLLPLISKLLGY ++AAS TVKLPQ           
Sbjct: 1   MDYLGIDLSCAIGSLRNGEFPAKDCLLPLISKLLGYFLVAASMTVKLPQ----------- 60

Query: 61  RFILKILKHQSVRGLSVISFELEVVGYTIALAYCVHKGLPFSAYGELAFLLVQAIILVAV 120
             I+KI+ ++SV+GLSV++FELEV+GYTI+LAYC++K LPFSA+GELAFLL+QA+ILVA 
Sbjct: 61  --IMKIVDNKSVKGLSVVAFELEVIGYTISLAYCLNKDLPFSAFGELAFLLIQALILVAC 120

Query: 121 IYYYSQPIGMTTWMRALLYCAVAPTVLA 149
           IYY+SQP+ +TTW++A+LY A+APTV A
Sbjct: 121 IYYFSQPLSVTTWVKAILYFAIAPTVFA 135

The following BLAST results are available for this feature:

BLAST of MS018871 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022132026.1	3.2e-84	92.78	mannose-P-dolichol utilization defect 1 protein homolog 2 [Momordica charantia]	[more]
XP_004142876.1	6.8e-82	89.44	mannose-P-dolichol utilization defect 1 protein homolog 2 [Cucumis sativus] >XP_...	[more]
XP_038886542.1	6.8e-82	89.44	mannose-P-dolichol utilization defect 1 protein homolog 2 [Benincasa hispida]	[more]
KAG7020593.1	2.0e-81	86.70	Mannose-P-dolichol utilization defect 1 protein-like 2, partial [Cucurbita argyr...	[more]
XP_023001966.1	2.8e-80	87.78	mannose-P-dolichol utilization defect 1 protein homolog 2 [Cucurbita maxima] >XP...	[more]

BLAST of MS018871 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q8VY63	1.1e-71	73.74	Mannose-P-dolichol utilization defect 1 protein homolog 2 OS=Arabidopsis thalian...	[more]
Q9LTI3	6.2e-62	65.36	Mannose-P-dolichol utilization defect 1 protein homolog 1 OS=Arabidopsis thalian...	[more]
Q60441	1.0e-08	36.23	Mannose-P-dolichol utilization defect 1 protein OS=Cricetulus griseus OX=10029 G...	[more]
O75352	3.9e-08	33.12	Mannose-P-dolichol utilization defect 1 protein OS=Homo sapiens OX=9606 GN=MPDU1...	[more]
Q9R0Q9	9.7e-07	31.21	Mannose-P-dolichol utilization defect 1 protein OS=Mus musculus OX=10090 GN=Mpdu...	[more]

BLAST of MS018871 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1BR33	1.6e-84	92.78	Mannose-P-dolichol utilization defect 1 protein homolog OS=Momordica charantia O...	[more]
E5GB83	3.3e-82	89.44	Mannose-P-dolichol utilization defect 1 protein homolog OS=Cucumis melo subsp. m...	[more]
A0A0A0LL56	3.3e-82	89.44	Mannose-P-dolichol utilization defect 1 protein homolog OS=Cucumis sativus OX=36...	[more]
A0A1S3BBF5	3.3e-82	89.44	Mannose-P-dolichol utilization defect 1 protein homolog OS=Cucumis melo OX=3656 ...	[more]
A0A6J1KK36	1.4e-80	87.78	Mannose-P-dolichol utilization defect 1 protein homolog OS=Cucurbita maxima OX=3...	[more]

BLAST of MS018871 vs. TAIR 10


Match Name	E-value	Identity	Description
AT4G07390.1	8.0e-73	73.74	Mannose-P-dolichol utilization defect 1 protein	[more]
AT5G59470.1	4.4e-63	65.36	Mannose-P-dolichol utilization defect 1 protein	[more]
AT5G59470.2	6.8e-48	62.84	Mannose-P-dolichol utilization defect 1 protein	[more]

InterPro

Analysis Name: InterPro Annotations of Bitter gourd (TR) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR006603	PQ-loop repeat	PFAM	PF04193	PQ-loop	coord: 63..102 e-value: 2.4E-6 score: 27.2
None	No IPR available	GENE3D	1.20.1280.290		coord: 28..126 e-value: 2.1E-8 score: 36.2
None	No IPR available	PANTHER	PTHR12226:SF4	MANNOSE-P-DOLICHOL UTILIZATION DEFECT 1 PROTEIN HOMOLOG 1	coord: 2..179
IPR016817	Mannose-P-dolichol utilization defect 1 protein	PANTHER	PTHR12226	MANNOSE-P-DOLICHOL UTILIZATION DEFECT 1 LEC35 -RELATED	coord: 2..179

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
MS018871.1	MS018871.1	mRNA