MS018849 (gene) Bitter gourd (TR) v1

Overview


Name	MS018849
Type	gene
Organism	Momordica charantia cv. TR (Bitter gourd (TR) v1)
Description	Protein-serine/threonine phosphatase
Location	scaffold14: 332631 .. 337985 (+)
RNA-Seq Expression	MS018849
Synteny	MS018849

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGAAGTATCGTTATGCAATGGTTTGCTCATCCAACCAGAATCGAAGCATGGAGGCTCACTCTATCCTCAAAAGCAAAGGCTTCAACGTTTCATCCTATGGCACTGGGGCTCACGTGAAGCTTCCTGGACCTTCTCTCCGAGAACCCAATGTATACGACTTTGGTACCCCGTACAAGCACATGTTCGATGATCTCCGTCGAAAAGATCCTGAACTGTATCCTTTCCCCGCGTCCTCTTTTTGAGAAGGACCCGAAGACTGGTGATATTATAGTCTTCTGAAATTGTAGATATCTTTGTAAATTTTATAGTTTCCTGGTTGGACTCTAAAGCTCAATTATAATTTAACCTTAAAACGTGCATAGATATAAGCGTAATGGCATTCTGCCCATGCTCAAAAGAAATGCAACCGTCAAAACGGCTCCTCAACGTTGGCAAGATAATGCCGCGGACGGTTCCTTTGACGTGGTATTTAGTTTTGAAGAAAAGGTTTTTGATATGGTTATTGAAGGTTAATTTGCCTACTTCTTGTATTTATGCTTGTGCAATTTAATGGCGCTGCAATTCATTATGGTTGTTTGGCTGTAAGAAAAAATTTCCCCTTTATTTCTATCATTTTTTCTGGATGGTGACATTCTTATGACTGATGATGTTTTGGATGCTTTAGAGTGCATTTTTTTTTTTATAATAAACTGAACTTTTATTGAGAAAAGATAATAAGCCAAGCTTTAGAGTGCATTTTATGCGCTATCTATATGCAGCGGATTATTTTTCAACATAAATAACATACAATGCGTATGTATATATGAAATATGGCTGATGATGTAGATTTTTTAAGAATGAGAATTTTTTTTTTTTTTTTTGACTTCAAGAATGAGATTATTAATGCAAGCTTCAACAAAACATACATTTACCTCATCCCAAAAAGTTGGACGGTGGAACTGTTGGAGATCTTAGACCTAGTAGTCCCATCTCTTCCTTGGATAAAATTGTGGCTAGGGTTTTATTCAAAAGACTATAAAAGGTCCTACTCTCCATCATAATAGAACATCAATAATATTTTGTTGGAAAGGAACGCTAGAATCTTCGAAGATAAGATTTCTTCTTTTGAAGTTTTTTGTAATACAGTTCATTTACACACTTCATGGTGGTGTCATAGGCATAGAAAATACTTTTGTAATTATAGCCTCTCTTCGATTATGCAAGACTGGAGAGCTCTTCTTTTGTAGTTCTTGGGAGGGGATCCCTCTTCCCCCTGCCCTTAGGCTGTTTCTTGTGTTTTCTATGCTTTTGCTAATAGAATGTTTCTTATCCAAAAAAAAAAAATATATATTTTGTTAAAGGTCGACAAATCTTTGATACTACTCTTGTTGCTCATGACTGATGTAAACCAAAGAGAGAATTTTATTAACAGCAGAATTGATTAACCTCTAAATAAATACAGCAGCTTCCTTTTTATAGGAGGAAGGCCACGGTTTAAAGGCTTGTGTTAAAGAAGCCGTTTGAGAAAAACTATCCTAACTAAAATAGCTAAACAAGGTTCTACCTAACTAACTAATATCACTTGGTTATGTCAATTTCCCTCCCTCTAAAAGCAGAGCTCGTCCTCGAGTTAACTTGCCAAAGTAAATCCATCTGGGCTGCAAAATGGTGAATACTTGAGATGTTGAAAATAGGTCTGGTTTTAAAATTCGAGGGGTTTGATCTTATAGGTGTTAGGGCCGTATTTCTTAAGAACTTCAAAGCAACCAAGCTTCTTTTTAGTAGTTTGTTGTAAGATTCAGATGGAACTCGTCCATTTCGCAAATGAATCATAACTATATCACCCTCCTTTTAACTCCTTTTCTCTTCGCTTGCTGTCAGCATCTTGTTTACACTTGGCATTTGCTTCTTCAATATGGTATTGGACTTCCTCGTGGAGCTTTGTTTATACTTGGCTCTGCTGTTTGTGTTTTTCTATGGTACGGTTGCTACTTTTCGGTAAACCGTTATCCACGCGCCTATCTTCACTCTCCGGCTCTCTATGGTGAGTACGATGGATTCCAACGATGTAGTCTTGGTGGTTTTCTTCCGAAAAAAAGAAAAAACGGGTCCACGGTTGAAAATAGCGAGGAGGACAATTAAGAAGGAAGATCGATGAAAGCTGGAATAAAGCTGGTGGAGTTAGTTTCCACCTTAATACTGATCTCCATGAGGTCCATGAGATTTTTGGTTTTATTAGCAACTGCCTCGAGACCCTCACAAGCCTCCCCCATGATTTTAAAGGTATCCATGTTCCACCTATCTATGGGAATACGTCGAACCTTTATCCATCCACCATAAGATGGAACAACCTGGTCTCAAGTAAGATTTTCTGGACTGCAAGGGCTGTAAAGAAGTTGGAAAGGTCCAACTTCTTGCTAGATTCTGCGATTACCTAAGATCTGAGCATGTTCTGTGTCTTGGCAACTCATTAAAGCTTTGTTGGATCGGTAAGGGTTTAAAGAACAAAAGCTTGTGACCACCTGTGAGAGTCCTAGTAGGGATAGTTTGGGAATATTATTAGTATATGAGTTAGGAGCATTATAGTAATTAGTTAGGGGTGAGTTTGTTATAAATAGAAGTAGTAGGGAGAGAGAGAAGGCATCTTGGGAAATAGTTTATGGTGAAGAGCTTAGTATAGTTCTTTGTGAGAGAGATGACCCTCTCAGAAGGCTATTAATATTGTAATTTCTCTTTGATATTGCAATGTAGTTACTTAGTTTCCTTTAGTGTATTCAGGATCCTAACACCTCCTTTTGCAAAGCTCTAAGGATCTTGTACCAATATCATGAAAATTCTTGCTTTGGACCACTATCATGCTTTTGAAGTCAAAGGGTAGAACATTTATTTCAGTCCCTTGTGTAGGTGAAATGAAGTTCTTTTGTGGCAACATGATTGCTGTCTTTTCTTGCTTCTGCAGTCAAATCTTTTGACTTAGAGACTGCATCTTTATAAGATATCTTTAATGGAGGAGGAGCTGGAGTAATTGCAGCGTACCAGAGACATCAAAGTTGTAAAAAGACATGAGATCAATGAAAGAAACCTAACCGTTTCGTTGTGGTCCCACAGCTATGAGAATTCTGTTTTTGCCTCCATTTGAGTCCAGTCGAACTATTTCTGCCGAGTATCCCAGTTTATTGTTGACTTTTTCAATCCATAAAGTCTGATCATCTATCCTTCTTTCTTTGAAGAACTTATAACTTAAAGGAGTATCTAAGACGGTTTTGAAGTTGTCGATAATCTATCTCAAGGTGCTCTAGTGTACAACGATGGAGAAGACTTTGTCCTTTGTTGATTCGGTGATTCGAATATAACTTCCTTTTGAGCTTTCATCTATTTCAATCGAGAATGATTTCCTTTAATCGGTTCTTGGATTTGTCCAGTGAATTATGGTGTGGTGTTGCAGAAGAAGAGGGGACAGAGAGAAGTGTGGTAAAGGATTCAGACATGGTGGGTTGGGTCAGTGGTGATGGTGAGGTTGAACGCCGGAGAGGGAAAGGGGAGGAGAGGAGAGAGCACCATAATTTTACCTCAACTCTTCAGCTTTGTATATAAGGTGATTTCTTTGTTGTTGAAACTTGAAATATGTCGTTTACCTAGATCTAATGATACATCTCCCCATATTGGGCGCCATTTTTGCGTCTCTGTAGGCGTCCAGTTTCAAAATCAAGTAATCTTGGAGTAATAATCAAGGAATGAAGATAAAAAGAAATGGGTGAATTGGGTTGTGTTAGTTAAATTTATGGAATCGATACTTTCCTGGTGGGTCACTGTTTGTGGTTCTGTGTTGAGTGCTTCTGGTTCCTCTAAAGTTGAAAAGAGTGGAAGGGGCAGGTGGTCTGTGAGCAATAATAATAATAAAGTAAATTAAGGATTAGCAGTTCCTTCAGAAGGATGGGGTGTTTGGGCCTTCCCTGAATATTTTGGTTAAGTTCCATGATGAAGAAAGGAATGCATTATCGTGTGTTGCAGAAAGAGAACTCAGTAGATATTTCTATGATTTTTTTCCCTAGCTAAGAGGGAATTGATAGCTCTCCTAGCTATTTCTTTCATATGTGCTTGAGCCTACTTTCTAGCATTGTTTGTGACGAGATTTAATGAATTGGTTGAATTTGTAATTACAATTTTTGGCATTGTCTTATCAAAATAATAATCAACATAAGTTTTGAGGTTTCTATGATAGGAGAGAGTCAGAATTTTAAGGGAAGTGGAAAAACGTGGAGGAAAAACTAAAAAGTTGGAATAAATTTTTTTTTCCCCGTCTTTGGTATACGAATAGACTTATCTCCCCGTATGATCGACACCCCCTATGTTATCTAATAATTCATGACGTCAAGGAACTATGGTTTGTTCTGAATATTGTTTCAATTTTTCATAGAAAATAGAGAATCGTCCCTTTATTTAGTGTCATCAGTGAATTTCTGTAAGATAAGCCTACCTATGTTCACATGCGATAACCCTTTTTCTTTTTTTGGGACTAAGCCTCGACTGTTTACTCATTCCTCTGTATTTTGAAGCATAGCTATTTCATGTAGAGTTGAGAGTTTCACGTATATTATCAGAATTTTTAAAATGTGGAGCCTGAAAGTGTTGGAAGTTCATAGAAATTGGAAGTTAGCTCAAAATGAGGTTTTTAAAACAGGTTGTCAGGCATGCGTGTAATGATTTGTCTTAGGTTATTTGGCTACTCTGCTATTATGTTGTTATGCGTAGTTTTTCAGGCACGAAGCTTGTTATATAAATAGCTGTCTCTGATTCGTTCATGCATAGACAGGCAAATTCTAATTAGAAACTTTGTTCTCTTGCTTCCTTCTTCCGTTTCTGAAAATAAATACATTGTTCAAGAACCAATATTTTAGTTCTCAGAAACACCTCTAGGTACAACAATTTAGCTGTTTCCAATTAAGTTGGTGTGCGCCTATCTTGCGTTCTTTAATGTACAATGTATGCTCGTGTTCCTGTATGCTTCTGATATTACTCATCTACCAAAGTGGGCCGCTTCTGAACTATTCTTTCTGCTCAACTGTCTGTTGGCAATAATTGAGCAGATCTCAACACCCGTGATCATGGACTGATGAAAACTGTACTGATTGTCAATTTGGAGGTGAAAGATAACCACGAGGAGGCAGCTATAGGAGCTCGCCTTACTTTTGATCTTTGCCAGGAGGTCTAGCTCTCTTGGGCTTTTTCATTATTAGTTTGTGTTGATTGGTTTCTAATGGAATTTTTTATGATAGATTGAACGGACTGAATCATGGGAAGGTACCATAGATGACATCGTGATTGCCTTCGAGAAACAGCACAGAAGAAAGCTGTTGTATAGTATTTCTTTTTAC

mRNA sequence

ATGAAGTATCGTTATGCAATGGTTTGCTCATCCAACCAGAATCGAAGCATGGAGGCTCACTCTATCCTCAAAAGCAAAGGCTTCAACGTTTCATCCTATGGCACTGGGGCTCACGTGAAGCTTCCTGGACCTTCTCTCCGAGAACCCAATGTATACGACTTTGGTACCCCGTACAAGCACATGTTCGATGATCTCCGTCGAAAAGATCCTGAACTATATAAGCGTAATGGCATTCTGCCCATGCTCAAAAGAAATGCAACCGTCAAAACGGCTCCTCAACGTTGGCAAGATAATGCCGCGGACGGTTCCTTTGACGTGGTATTTAGTTTTGAAGAAAAGGTTTTTGATATGGTTATTGAAGCAGATCTCAACACCCGTGATCATGGACTGATGAAAACTGTACTGATTGTCAATTTGGAGGTGAAAGATAACCACGAGGAGGCAGCTATAGGAGCTCGCCTTACTTTTGATCTTTGCCAGGAGATTGAACGGACTGAATCATGGGAAGGTACCATAGATGACATCGTGATTGCCTTCGAGAAACAGCACAGAAGAAAGCTGTTGTATAGTATTTCTTTTTAC

Coding sequence (CDS)

ATGAAGTATCGTTATGCAATGGTTTGCTCATCCAACCAGAATCGAAGCATGGAGGCTCACTCTATCCTCAAAAGCAAAGGCTTCAACGTTTCATCCTATGGCACTGGGGCTCACGTGAAGCTTCCTGGACCTTCTCTCCGAGAACCCAATGTATACGACTTTGGTACCCCGTACAAGCACATGTTCGATGATCTCCGTCGAAAAGATCCTGAACTATATAAGCGTAATGGCATTCTGCCCATGCTCAAAAGAAATGCAACCGTCAAAACGGCTCCTCAACGTTGGCAAGATAATGCCGCGGACGGTTCCTTTGACGTGGTATTTAGTTTTGAAGAAAAGGTTTTTGATATGGTTATTGAAGCAGATCTCAACACCCGTGATCATGGACTGATGAAAACTGTACTGATTGTCAATTTGGAGGTGAAAGATAACCACGAGGAGGCAGCTATAGGAGCTCGCCTTACTTTTGATCTTTGCCAGGAGATTGAACGGACTGAATCATGGGAAGGTACCATAGATGACATCGTGATTGCCTTCGAGAAACAGCACAGAAGAAAGCTGTTGTATAGTATTTCTTTTTAC

Protein sequence

MKYRYAMVCSSNQNRSMEAHSILKSKGFNVSSYGTGAHVKLPGPSLREPNVYDFGTPYKHMFDDLRRKDPELYKRNGILPMLKRNATVKTAPQRWQDNAADGSFDVVFSFEEKVFDMVIEADLNTRDHGLMKTVLIVNLEVKDNHEEAAIGARLTFDLCQEIERTESWEGTIDDIVIAFEKQHRRKLLYSISFY

Homology

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BLAST of MS018849 vs. NCBI nr
Match: XP_022137335.1 (RNA polymerase II subunit A C-terminal domain phosphatase SSU72 [Momordica charantia])

HSP 1 Score: 391.0 bits (1003), Expect = 6.1e-105
Identity = 193/194 (99.48%), Postives = 193/194 (99.48%), Query Frame = 0


Query: 1   MKYRYAMVCSSNQNRSMEAHSILKSKGFNVSSYGTGAHVKLPGPSLREPNVYDFGTPYKH 60
           MKYRYAMVCSSNQNRSMEAHSILKSKGFNVSSYGTGAHVKLPGPSLREPNVYDFGTPYKH
Sbjct: 1   MKYRYAMVCSSNQNRSMEAHSILKSKGFNVSSYGTGAHVKLPGPSLREPNVYDFGTPYKH 60

Query: 61  MFDDLRRKDPELYKRNGILPMLKRNATVKTAPQRWQDNAADGSFDVVFSFEEKVFDMVIE 120
           MFDDLRRKDPELYKRNGILPMLKRNATVKTAPQRWQDNAADGSFDVVFSFEEKVFDMVIE
Sbjct: 61  MFDDLRRKDPELYKRNGILPMLKRNATVKTAPQRWQDNAADGSFDVVFSFEEKVFDMVIE 120

Query: 121 ADLNTRDHGLMKTVLIVNLEVKDNHEEAAIGARLTFDLCQEIERTESWEGTIDDIVIAFE 180
            DLNTRDHGLMKTVLIVNLEVKDNHEEAAIGARLTFDLCQEIERTESWEGTIDDIVIAFE
Sbjct: 121 -DLNTRDHGLMKTVLIVNLEVKDNHEEAAIGARLTFDLCQEIERTESWEGTIDDIVIAFE 180

Query: 181 KQHRRKLLYSISFY 195
           KQHRRKLLYSISFY
Sbjct: 181 KQHRRKLLYSISFY 193

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BLAST of MS018849 vs. NCBI nr
Match: XP_008446784.1 (PREDICTED: RNA polymerase II subunit A C-terminal domain phosphatase SSU72 [Cucumis melo])

HSP 1 Score: 375.6 bits (963), Expect = 2.7e-100
Identity = 186/194 (95.88%), Postives = 188/194 (96.91%), Query Frame = 0


Query: 1   MKYRYAMVCSSNQNRSMEAHSILKSKGFNVSSYGTGAHVKLPGPSLREPNVYDFGTPYKH 60
           MKYRYAMVCSSNQNRSMEAHSILKSKGFNVSSYGTGAHVKLPGPSLREPNVYDFGTPYKH
Sbjct: 1   MKYRYAMVCSSNQNRSMEAHSILKSKGFNVSSYGTGAHVKLPGPSLREPNVYDFGTPYKH 60

Query: 61  MFDDLRRKDPELYKRNGILPMLKRNATVKTAPQRWQDNAADGSFDVVFSFEEKVFDMVIE 120
           MFDDLRRKDPELYKRNGILPMLKRNA VKTAPQRWQDNAADGSFDVVF+FEEKVFDMVIE
Sbjct: 61  MFDDLRRKDPELYKRNGILPMLKRNAAVKTAPQRWQDNAADGSFDVVFTFEEKVFDMVIE 120

Query: 121 ADLNTRDHGLMKTVLIVNLEVKDNHEEAAIGARLTFDLCQEIERTESWEGTIDDIVIAFE 180
            DLNTRDH LMKTVLIVNLEVKDNHEEAAIGARLTFDLCQEIERTESWE +IDDIVI FE
Sbjct: 121 -DLNTRDHALMKTVLIVNLEVKDNHEEAAIGARLTFDLCQEIERTESWEDSIDDIVITFE 180

Query: 181 KQHRRKLLYSISFY 195
           KQ RRKLLYSISFY
Sbjct: 181 KQLRRKLLYSISFY 193

[Close]

BLAST of MS018849 vs. NCBI nr
Match: XP_004137380.1 (RNA polymerase II subunit A C-terminal domain phosphatase SSU72 [Cucumis sativus] >KAE8652487.1 hypothetical protein Csa_014181 [Cucumis sativus])

HSP 1 Score: 374.0 bits (959), Expect = 7.8e-100
Identity = 185/194 (95.36%), Postives = 188/194 (96.91%), Query Frame = 0


Query: 1   MKYRYAMVCSSNQNRSMEAHSILKSKGFNVSSYGTGAHVKLPGPSLREPNVYDFGTPYKH 60
           MKYRYAMVCSSNQNRSMEAHSILKSKGFNVSSYGTGAHVKLPGPSLREPNVYDFGTPYKH
Sbjct: 1   MKYRYAMVCSSNQNRSMEAHSILKSKGFNVSSYGTGAHVKLPGPSLREPNVYDFGTPYKH 60

Query: 61  MFDDLRRKDPELYKRNGILPMLKRNATVKTAPQRWQDNAADGSFDVVFSFEEKVFDMVIE 120
           MFDDLRRKDPELYKRNGILPMLKRNA VKTAPQRWQDNAADGSFDVVF+FEEKVFDMVIE
Sbjct: 61  MFDDLRRKDPELYKRNGILPMLKRNAAVKTAPQRWQDNAADGSFDVVFTFEEKVFDMVIE 120

Query: 121 ADLNTRDHGLMKTVLIVNLEVKDNHEEAAIGARLTFDLCQEIERTESWEGTIDDIVIAFE 180
            DLNTRDH +MKTVLIVNLEVKDNHEEAAIGARLTFDLCQEIERTESWE +IDDIVI FE
Sbjct: 121 -DLNTRDHAMMKTVLIVNLEVKDNHEEAAIGARLTFDLCQEIERTESWEDSIDDIVINFE 180

Query: 181 KQHRRKLLYSISFY 195
           KQ RRKLLYSISFY
Sbjct: 181 KQLRRKLLYSISFY 193

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BLAST of MS018849 vs. NCBI nr
Match: XP_038895501.1 (RNA polymerase II subunit A C-terminal domain phosphatase SSU72 isoform X1 [Benincasa hispida])

HSP 1 Score: 372.5 bits (955), Expect = 2.3e-99
Identity = 183/194 (94.33%), Postives = 187/194 (96.39%), Query Frame = 0


Query: 1   MKYRYAMVCSSNQNRSMEAHSILKSKGFNVSSYGTGAHVKLPGPSLREPNVYDFGTPYKH 60
           MKYRYAMVCSSNQNRSMEAHSILK+KGFNVSSYGTGAHVKLPGPSLREPNVYDFGTPYKH
Sbjct: 1   MKYRYAMVCSSNQNRSMEAHSILKNKGFNVSSYGTGAHVKLPGPSLREPNVYDFGTPYKH 60

Query: 61  MFDDLRRKDPELYKRNGILPMLKRNATVKTAPQRWQDNAADGSFDVVFSFEEKVFDMVIE 120
           MFDDLRRKDPELYKRNGILPMLKRNA VKTAPQRWQDNAADGSFDVVF+FEEKVFDMVIE
Sbjct: 61  MFDDLRRKDPELYKRNGILPMLKRNAAVKTAPQRWQDNAADGSFDVVFTFEEKVFDMVIE 120

Query: 121 ADLNTRDHGLMKTVLIVNLEVKDNHEEAAIGARLTFDLCQEIERTESWEGTIDDIVIAFE 180
            DLNTRDH LMKTVLIVNLEVKDNHEEAAIGARL FDLCQE+ERTESWE +IDDIVI FE
Sbjct: 121 -DLNTRDHALMKTVLIVNLEVKDNHEEAAIGARLIFDLCQELERTESWEDSIDDIVITFE 180

Query: 181 KQHRRKLLYSISFY 195
           KQ RRKLLYSISFY
Sbjct: 181 KQQRRKLLYSISFY 193

[Close]

BLAST of MS018849 vs. NCBI nr
Match: XP_022948646.1 (RNA polymerase II subunit A C-terminal domain phosphatase SSU72 [Cucurbita moschata] >XP_022948647.1 RNA polymerase II subunit A C-terminal domain phosphatase SSU72 [Cucurbita moschata] >XP_023523675.1 RNA polymerase II subunit A C-terminal domain phosphatase SSU72 [Cucurbita pepo subsp. pepo] >XP_023523676.1 RNA polymerase II subunit A C-terminal domain phosphatase SSU72 [Cucurbita pepo subsp. pepo] >KAG7037061.1 RNA polymerase II subunit A C-terminal domain phosphatase SSU72 [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 372.5 bits (955), Expect = 2.3e-99
Identity = 185/194 (95.36%), Postives = 186/194 (95.88%), Query Frame = 0


Query: 1   MKYRYAMVCSSNQNRSMEAHSILKSKGFNVSSYGTGAHVKLPGPSLREPNVYDFGTPYKH 60
           MKYRYAMVCSSNQNRSMEAHSILKSKGFNVSSYGTGAHVKLPGPSLREPNVYDFGTPYKH
Sbjct: 1   MKYRYAMVCSSNQNRSMEAHSILKSKGFNVSSYGTGAHVKLPGPSLREPNVYDFGTPYKH 60

Query: 61  MFDDLRRKDPELYKRNGILPMLKRNATVKTAPQRWQDNAADGSFDVVFSFEEKVFDMVIE 120
           MFDDLRRKDPELYKRNGILPMLKRNA VKTAPQRWQDNAADG FDVVF+FEEKVFDMVIE
Sbjct: 61  MFDDLRRKDPELYKRNGILPMLKRNAAVKTAPQRWQDNAADGFFDVVFTFEEKVFDMVIE 120

Query: 121 ADLNTRDHGLMKTVLIVNLEVKDNHEEAAIGARLTFDLCQEIERTESWEGTIDDIVIAFE 180
            DLNTRDH LMKTVLIVNLEVKDNHEEAAIGARLTFDLCQEIER ESWE TIDDIVIAFE
Sbjct: 121 -DLNTRDHVLMKTVLIVNLEVKDNHEEAAIGARLTFDLCQEIERAESWEDTIDDIVIAFE 180

Query: 181 KQHRRKLLYSISFY 195
           K  RRKLLYSISFY
Sbjct: 181 KHQRRKLLYSISFY 193

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BLAST of MS018849 vs. ExPASy Swiss-Prot
Match: Q6PC19 (RNA polymerase II subunit A C-terminal domain phosphatase SSU72 OS=Danio rerio OX=7955 GN=ssu72 PE=2 SV=1)

HSP 1 Score: 202.2 bits (513), Expect = 5.3e-51
Identity = 97/191 (50.79%), Postives = 140/191 (73.30%), Query Frame = 0


Query: 4   RYAMVCSSNQNRSMEAHSILKSKGFNVSSYGTGAHVKLPGPSLREPNVYDFGTPYKHMFD 63
           R A+VCSSNQNRSMEAH+IL  +GF+V S+GTG HVKLPGP+  +PN+YDF T Y+ M++
Sbjct: 7   RVAVVCSSNQNRSMEAHNILSKRGFDVRSFGTGTHVKLPGPAPDKPNIYDFKTTYEQMYN 66

Query: 64  DLRRKDPELYKRNGILPMLKRNATVKTAPQRWQDNAADGSFDVVFSFEEKVFDMVIEADL 123
           DL RKD ELY +NGIL ML RN  +K+ P+R+Q  +    FD+V + EE+V+D V+E DL
Sbjct: 67  DLVRKDKELYTQNGILHMLDRNKRIKSRPERFQ--SCRDQFDLVITCEERVYDQVLE-DL 126

Query: 124 NTRDHGLMKTVLIVNLEVKDNHEEAAIGARLTFDLCQEIERTESWEGTIDDIVIAFEKQH 183
           N+R+    + V ++N++++DNHEEA +GA L  +LCQ I+ T+  E  +D+++  FE++ 
Sbjct: 127 NSREQESFQPVHVINVDIQDNHEEATLGAFLICELCQCIQHTDDMENEMDELLQEFEEKS 186

Query: 184 RRKLLYSISFY 195
            R  L+S+ FY
Sbjct: 187 HRPFLHSVCFY 194

[Close]

BLAST of MS018849 vs. ExPASy Swiss-Prot
Match: Q9CY97 (RNA polymerase II subunit A C-terminal domain phosphatase SSU72 OS=Mus musculus OX=10090 GN=Ssu72 PE=1 SV=1)

HSP 1 Score: 202.2 bits (513), Expect = 5.3e-51
Identity = 101/191 (52.88%), Postives = 139/191 (72.77%), Query Frame = 0


Query: 4   RYAMVCSSNQNRSMEAHSILKSKGFNVSSYGTGAHVKLPGPSLREPNVYDFGTPYKHMFD 63
           R A+VCSSNQNRSMEAH+IL  +GF+V S+GTG HVKLPGP+  +PNVYDF T Y  M++
Sbjct: 7   RVAVVCSSNQNRSMEAHNILSKRGFSVRSFGTGTHVKLPGPAPDKPNVYDFKTTYDQMYN 66

Query: 64  DLRRKDPELYKRNGILPMLKRNATVKTAPQRWQDNAADGSFDVVFSFEEKVFDMVIEADL 123
           DL RKD ELY +NGIL ML RN  +K  P+R+Q N  D  FD++ + EE+V+D V+E DL
Sbjct: 67  DLLRKDKELYTQNGILHMLDRNKRIKPRPERFQ-NCTD-LFDLILTCEERVYDQVVE-DL 126

Query: 124 NTRDHGLMKTVLIVNLEVKDNHEEAAIGARLTFDLCQEIERTESWEGTIDDIVIAFEKQH 183
           N+R+    + V +VN++++DNHEEA +GA L  +LCQ I+ TE  E  ID+++  FE++ 
Sbjct: 127 NSREQETCQPVHVVNVDIQDNHEEATLGAFLICELCQCIQHTEDMENEIDELLQEFEEKS 186

Query: 184 RRKLLYSISFY 195
            R  L+++ FY
Sbjct: 187 GRAFLHTVCFY 194

[Close]

BLAST of MS018849 vs. ExPASy Swiss-Prot
Match: Q9NP77 (RNA polymerase II subunit A C-terminal domain phosphatase SSU72 OS=Homo sapiens OX=9606 GN=SSU72 PE=1 SV=1)

HSP 1 Score: 201.8 bits (512), Expect = 6.9e-51
Identity = 101/191 (52.88%), Postives = 139/191 (72.77%), Query Frame = 0


Query: 4   RYAMVCSSNQNRSMEAHSILKSKGFNVSSYGTGAHVKLPGPSLREPNVYDFGTPYKHMFD 63
           R A+VCSSNQNRSMEAH+IL  +GF+V S+GTG HVKLPGP+  +PNVYDF T Y  M++
Sbjct: 7   RVAVVCSSNQNRSMEAHNILSKRGFSVRSFGTGTHVKLPGPAPDKPNVYDFKTTYDQMYN 66

Query: 64  DLRRKDPELYKRNGILPMLKRNATVKTAPQRWQDNAADGSFDVVFSFEEKVFDMVIEADL 123
           DL RKD ELY +NGIL ML RN  +K  P+R+Q N  D  FD++ + EE+V+D V+E DL
Sbjct: 67  DLLRKDKELYTQNGILHMLDRNKRIKPRPERFQ-NCKD-LFDLILTCEERVYDQVVE-DL 126

Query: 124 NTRDHGLMKTVLIVNLEVKDNHEEAAIGARLTFDLCQEIERTESWEGTIDDIVIAFEKQH 183
           N+R+    + V +VN++++DNHEEA +GA L  +LCQ I+ TE  E  ID+++  FE++ 
Sbjct: 127 NSREQETCQPVHVVNVDIQDNHEEATLGAFLICELCQCIQHTEDMENEIDELLQEFEEKS 186

Query: 184 RRKLLYSISFY 195
            R  L+++ FY
Sbjct: 187 GRTFLHTVCFY 194

[Close]

BLAST of MS018849 vs. ExPASy Swiss-Prot
Match: Q4KLK9 (RNA polymerase II subunit A C-terminal domain phosphatase SSU72 OS=Rattus norvegicus OX=10116 GN=Ssu72 PE=2 SV=1)

HSP 1 Score: 201.8 bits (512), Expect = 6.9e-51
Identity = 101/191 (52.88%), Postives = 139/191 (72.77%), Query Frame = 0


Query: 4   RYAMVCSSNQNRSMEAHSILKSKGFNVSSYGTGAHVKLPGPSLREPNVYDFGTPYKHMFD 63
           R A+VCSSNQNRSMEAH+IL  +GF+V S+GTG HVKLPGP+  +PNVYDF T Y  M++
Sbjct: 7   RVAVVCSSNQNRSMEAHNILSKRGFSVRSFGTGTHVKLPGPAPDKPNVYDFKTTYDQMYN 66

Query: 64  DLRRKDPELYKRNGILPMLKRNATVKTAPQRWQDNAADGSFDVVFSFEEKVFDMVIEADL 123
           DL RKD ELY +NGIL ML RN  +K  P+R+Q N  D  FD++ + EE+V+D V+E DL
Sbjct: 67  DLLRKDKELYTQNGILHMLDRNKRIKPRPERFQ-NCKD-LFDLILTCEERVYDQVVE-DL 126

Query: 124 NTRDHGLMKTVLIVNLEVKDNHEEAAIGARLTFDLCQEIERTESWEGTIDDIVIAFEKQH 183
           N+R+    + V +VN++++DNHEEA +GA L  +LCQ I+ TE  E  ID+++  FE++ 
Sbjct: 127 NSREQETCQPVHVVNVDIQDNHEEATLGAFLICELCQCIQHTEDMENEIDELLQEFEEKS 186

Query: 184 RRKLLYSISFY 195
            R  L+++ FY
Sbjct: 187 GRAFLHTVCFY 194

[Close]

BLAST of MS018849 vs. ExPASy Swiss-Prot
Match: Q17QI2 (RNA polymerase II subunit A C-terminal domain phosphatase SSU72 OS=Bos taurus OX=9913 GN=SSU72 PE=2 SV=1)

HSP 1 Score: 201.4 bits (511), Expect = 9.0e-51
Identity = 100/191 (52.36%), Postives = 139/191 (72.77%), Query Frame = 0


Query: 4   RYAMVCSSNQNRSMEAHSILKSKGFNVSSYGTGAHVKLPGPSLREPNVYDFGTPYKHMFD 63
           R A+VCSSNQNRSMEAH+IL  +GF+V S+GTG HVKLPGP+  +PNVYDF T Y  M++
Sbjct: 7   RVAVVCSSNQNRSMEAHNILSKRGFSVRSFGTGTHVKLPGPAPDKPNVYDFKTTYDQMYN 66

Query: 64  DLRRKDPELYKRNGILPMLKRNATVKTAPQRWQDNAADGSFDVVFSFEEKVFDMVIEADL 123
           DL RKD ELY +NGIL ML RN  +K  P+R+Q N  D  FD++ + EE+V+D V+E DL
Sbjct: 67  DLLRKDKELYTQNGILHMLDRNKRIKPRPERFQ-NCKD-LFDLILTCEERVYDQVVE-DL 126

Query: 124 NTRDHGLMKTVLIVNLEVKDNHEEAAIGARLTFDLCQEIERTESWEGTIDDIVIAFEKQH 183
           N+R+    + V ++N++++DNHEEA +GA L  +LCQ I+ TE  E  ID+++  FE++ 
Sbjct: 127 NSREQETCQPVHVINVDIQDNHEEATLGAFLICELCQCIQHTEDMENEIDELLQEFEEKS 186

Query: 184 RRKLLYSISFY 195
            R  L+++ FY
Sbjct: 187 GRTFLHTVCFY 194

[Close]

BLAST of MS018849 vs. ExPASy TrEMBL
Match: A0A6J1C6C8 (Protein-serine/threonine phosphatase OS=Momordica charantia OX=3673 GN=LOC111008820 PE=3 SV=1)

HSP 1 Score: 391.0 bits (1003), Expect = 3.0e-105
Identity = 193/194 (99.48%), Postives = 193/194 (99.48%), Query Frame = 0


Query: 1   MKYRYAMVCSSNQNRSMEAHSILKSKGFNVSSYGTGAHVKLPGPSLREPNVYDFGTPYKH 60
           MKYRYAMVCSSNQNRSMEAHSILKSKGFNVSSYGTGAHVKLPGPSLREPNVYDFGTPYKH
Sbjct: 1   MKYRYAMVCSSNQNRSMEAHSILKSKGFNVSSYGTGAHVKLPGPSLREPNVYDFGTPYKH 60

Query: 61  MFDDLRRKDPELYKRNGILPMLKRNATVKTAPQRWQDNAADGSFDVVFSFEEKVFDMVIE 120
           MFDDLRRKDPELYKRNGILPMLKRNATVKTAPQRWQDNAADGSFDVVFSFEEKVFDMVIE
Sbjct: 61  MFDDLRRKDPELYKRNGILPMLKRNATVKTAPQRWQDNAADGSFDVVFSFEEKVFDMVIE 120

Query: 121 ADLNTRDHGLMKTVLIVNLEVKDNHEEAAIGARLTFDLCQEIERTESWEGTIDDIVIAFE 180
            DLNTRDHGLMKTVLIVNLEVKDNHEEAAIGARLTFDLCQEIERTESWEGTIDDIVIAFE
Sbjct: 121 -DLNTRDHGLMKTVLIVNLEVKDNHEEAAIGARLTFDLCQEIERTESWEGTIDDIVIAFE 180

Query: 181 KQHRRKLLYSISFY 195
           KQHRRKLLYSISFY
Sbjct: 181 KQHRRKLLYSISFY 193

[Close]

BLAST of MS018849 vs. ExPASy TrEMBL
Match: A0A1S3BFX9 (Protein-serine/threonine phosphatase OS=Cucumis melo OX=3656 GN=LOC103489144 PE=3 SV=1)

HSP 1 Score: 375.6 bits (963), Expect = 1.3e-100
Identity = 186/194 (95.88%), Postives = 188/194 (96.91%), Query Frame = 0


Query: 1   MKYRYAMVCSSNQNRSMEAHSILKSKGFNVSSYGTGAHVKLPGPSLREPNVYDFGTPYKH 60
           MKYRYAMVCSSNQNRSMEAHSILKSKGFNVSSYGTGAHVKLPGPSLREPNVYDFGTPYKH
Sbjct: 1   MKYRYAMVCSSNQNRSMEAHSILKSKGFNVSSYGTGAHVKLPGPSLREPNVYDFGTPYKH 60

Query: 61  MFDDLRRKDPELYKRNGILPMLKRNATVKTAPQRWQDNAADGSFDVVFSFEEKVFDMVIE 120
           MFDDLRRKDPELYKRNGILPMLKRNA VKTAPQRWQDNAADGSFDVVF+FEEKVFDMVIE
Sbjct: 61  MFDDLRRKDPELYKRNGILPMLKRNAAVKTAPQRWQDNAADGSFDVVFTFEEKVFDMVIE 120

Query: 121 ADLNTRDHGLMKTVLIVNLEVKDNHEEAAIGARLTFDLCQEIERTESWEGTIDDIVIAFE 180
            DLNTRDH LMKTVLIVNLEVKDNHEEAAIGARLTFDLCQEIERTESWE +IDDIVI FE
Sbjct: 121 -DLNTRDHALMKTVLIVNLEVKDNHEEAAIGARLTFDLCQEIERTESWEDSIDDIVITFE 180

Query: 181 KQHRRKLLYSISFY 195
           KQ RRKLLYSISFY
Sbjct: 181 KQLRRKLLYSISFY 193

[Close]

BLAST of MS018849 vs. ExPASy TrEMBL
Match: A0A6J1G9U0 (Protein-serine/threonine phosphatase OS=Cucurbita moschata OX=3662 GN=LOC111452263 PE=3 SV=1)

HSP 1 Score: 372.5 bits (955), Expect = 1.1e-99
Identity = 185/194 (95.36%), Postives = 186/194 (95.88%), Query Frame = 0


Query: 1   MKYRYAMVCSSNQNRSMEAHSILKSKGFNVSSYGTGAHVKLPGPSLREPNVYDFGTPYKH 60
           MKYRYAMVCSSNQNRSMEAHSILKSKGFNVSSYGTGAHVKLPGPSLREPNVYDFGTPYKH
Sbjct: 1   MKYRYAMVCSSNQNRSMEAHSILKSKGFNVSSYGTGAHVKLPGPSLREPNVYDFGTPYKH 60

Query: 61  MFDDLRRKDPELYKRNGILPMLKRNATVKTAPQRWQDNAADGSFDVVFSFEEKVFDMVIE 120
           MFDDLRRKDPELYKRNGILPMLKRNA VKTAPQRWQDNAADG FDVVF+FEEKVFDMVIE
Sbjct: 61  MFDDLRRKDPELYKRNGILPMLKRNAAVKTAPQRWQDNAADGFFDVVFTFEEKVFDMVIE 120

Query: 121 ADLNTRDHGLMKTVLIVNLEVKDNHEEAAIGARLTFDLCQEIERTESWEGTIDDIVIAFE 180
            DLNTRDH LMKTVLIVNLEVKDNHEEAAIGARLTFDLCQEIER ESWE TIDDIVIAFE
Sbjct: 121 -DLNTRDHVLMKTVLIVNLEVKDNHEEAAIGARLTFDLCQEIERAESWEDTIDDIVIAFE 180

Query: 181 KQHRRKLLYSISFY 195
           K  RRKLLYSISFY
Sbjct: 181 KHQRRKLLYSISFY 193

[Close]

BLAST of MS018849 vs. ExPASy TrEMBL
Match: A0A6J1K8Q5 (Protein-serine/threonine phosphatase OS=Cucurbita maxima OX=3661 GN=LOC111492703 PE=3 SV=1)

HSP 1 Score: 371.7 bits (953), Expect = 1.9e-99
Identity = 184/194 (94.85%), Postives = 186/194 (95.88%), Query Frame = 0


Query: 1   MKYRYAMVCSSNQNRSMEAHSILKSKGFNVSSYGTGAHVKLPGPSLREPNVYDFGTPYKH 60
           MKYRYAMVCSSNQNRSMEAHSILKSKGFNVSSYGTGAHVKLPGPSLREPNVYDFGTPYKH
Sbjct: 1   MKYRYAMVCSSNQNRSMEAHSILKSKGFNVSSYGTGAHVKLPGPSLREPNVYDFGTPYKH 60

Query: 61  MFDDLRRKDPELYKRNGILPMLKRNATVKTAPQRWQDNAADGSFDVVFSFEEKVFDMVIE 120
           MFDDLRRKDPELYKRNGILPMLKRNA VKTAPQRWQDNAADG FDVVF+FEEKVFDMVIE
Sbjct: 61  MFDDLRRKDPELYKRNGILPMLKRNAAVKTAPQRWQDNAADGFFDVVFTFEEKVFDMVIE 120

Query: 121 ADLNTRDHGLMKTVLIVNLEVKDNHEEAAIGARLTFDLCQEIERTESWEGTIDDIVIAFE 180
            DLNTRDH LMKTVLIVNLEVKDNHEEAAIGARLTF+LCQEIER ESWE TIDDIVIAFE
Sbjct: 121 -DLNTRDHALMKTVLIVNLEVKDNHEEAAIGARLTFNLCQEIERAESWEDTIDDIVIAFE 180

Query: 181 KQHRRKLLYSISFY 195
           K  RRKLLYSISFY
Sbjct: 181 KHQRRKLLYSISFY 193

[Close]

BLAST of MS018849 vs. ExPASy TrEMBL
Match: A0A2P5FAG2 (Protein-serine/threonine phosphatase OS=Trema orientale OX=63057 GN=TorRG33x02_092930 PE=3 SV=1)

HSP 1 Score: 357.1 bits (915), Expect = 4.8e-95
Identity = 171/194 (88.14%), Postives = 185/194 (95.36%), Query Frame = 0


Query: 1   MKYRYAMVCSSNQNRSMEAHSILKSKGFNVSSYGTGAHVKLPGPSLREPNVYDFGTPYKH 60
           MKYRYAMVCSSNQNRSMEAHS+LK +GF+VSSYGTGAHVKLPGPSLREPNVYDFGTPYKH
Sbjct: 21  MKYRYAMVCSSNQNRSMEAHSLLKRQGFDVSSYGTGAHVKLPGPSLREPNVYDFGTPYKH 80

Query: 61  MFDDLRRKDPELYKRNGILPMLKRNATVKTAPQRWQDNAADGSFDVVFSFEEKVFDMVIE 120
           MFDDLRRKDPELYKRNGILPMLKRN+TVKTAPQRWQDNAADG+FDVVF+FEEKVFDMVIE
Sbjct: 81  MFDDLRRKDPELYKRNGILPMLKRNSTVKTAPQRWQDNAADGTFDVVFTFEEKVFDMVIE 140

Query: 121 ADLNTRDHGLMKTVLIVNLEVKDNHEEAAIGARLTFDLCQEIERTESWEGTIDDIVIAFE 180
            DL+TR+H LMK+VL++NLEVKDNHEEAA+GARL  DLCQEIE TE WE +IDD+V AFE
Sbjct: 141 -DLHTREHVLMKSVLVINLEVKDNHEEAAVGARLALDLCQEIEETEMWEDSIDDVVAAFE 200

Query: 181 KQHRRKLLYSISFY 195
           KQHRRKLLYSISFY
Sbjct: 201 KQHRRKLLYSISFY 213

[Close]

BLAST of MS018849 vs. TAIR 10
Match: AT1G73820.1 (Ssu72-like family protein )

HSP 1 Score: 318.2 bits (814), Expect = 4.7e-87
Identity = 151/194 (77.84%), Postives = 171/194 (88.14%), Query Frame = 0


Query: 1   MKYRYAMVCSSNQNRSMEAHSILKSKGFNVSSYGTGAHVKLPGPSLREPNVYDFGTPYKH 60
           M++RYAMVCSSNQNRSMEAH++LK +G +V+SYGTG+HVKLPGPSLREPNVYDFGTPYK 
Sbjct: 1   MRFRYAMVCSSNQNRSMEAHALLKRQGLDVASYGTGSHVKLPGPSLREPNVYDFGTPYKQ 60

Query: 61  MFDDLRRKDPELYKRNGILPMLKRNATVKTAPQRWQDNAADGSFDVVFSFEEKVFDMVIE 120
           MFD+LRRKDPELYKRNGIL M+KRN +VK APQRWQDNA DG FDVV +FEEKVFD V+E
Sbjct: 61  MFDELRRKDPELYKRNGILQMIKRNLSVKLAPQRWQDNAGDGVFDVVMTFEEKVFDSVLE 120

Query: 121 ADLNTRDHGLMKTVLIVNLEVKDNHEEAAIGARLTFDLCQEIERTESWEGTIDDIVIAFE 180
            DLN R+  L KT+L++NLEVKDNHEEAAIG RL  +LCQEIE  E+WE TIDDIV  FE
Sbjct: 121 -DLNNREQSLTKTILVMNLEVKDNHEEAAIGGRLALELCQEIEGNETWEDTIDDIVAGFE 180

Query: 181 KQHRRKLLYSISFY 195
           KQHRRKL+YSISFY
Sbjct: 181 KQHRRKLVYSISFY 193

The following BLAST results are available for this feature:

BLAST of MS018849 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022137335.1	6.1e-105	99.48	RNA polymerase II subunit A C-terminal domain phosphatase SSU72 [Momordica chara...	[more]
XP_008446784.1	2.7e-100	95.88	PREDICTED: RNA polymerase II subunit A C-terminal domain phosphatase SSU72 [Cucu...	[more]
XP_004137380.1	7.8e-100	95.36	RNA polymerase II subunit A C-terminal domain phosphatase SSU72 [Cucumis sativus...	[more]
XP_038895501.1	2.3e-99	94.33	RNA polymerase II subunit A C-terminal domain phosphatase SSU72 isoform X1 [Beni...	[more]
XP_022948646.1	2.3e-99	95.36	RNA polymerase II subunit A C-terminal domain phosphatase SSU72 [Cucurbita mosch...	[more]

BLAST of MS018849 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q6PC19	5.3e-51	50.79	RNA polymerase II subunit A C-terminal domain phosphatase SSU72 OS=Danio rerio O...	[more]
Q9CY97	5.3e-51	52.88	RNA polymerase II subunit A C-terminal domain phosphatase SSU72 OS=Mus musculus ...	[more]
Q9NP77	6.9e-51	52.88	RNA polymerase II subunit A C-terminal domain phosphatase SSU72 OS=Homo sapiens ...	[more]
Q4KLK9	6.9e-51	52.88	RNA polymerase II subunit A C-terminal domain phosphatase SSU72 OS=Rattus norveg...	[more]
Q17QI2	9.0e-51	52.36	RNA polymerase II subunit A C-terminal domain phosphatase SSU72 OS=Bos taurus OX...	[more]

BLAST of MS018849 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1C6C8	3.0e-105	99.48	Protein-serine/threonine phosphatase OS=Momordica charantia OX=3673 GN=LOC111008...	[more]
A0A1S3BFX9	1.3e-100	95.88	Protein-serine/threonine phosphatase OS=Cucumis melo OX=3656 GN=LOC103489144 PE=...	[more]
A0A6J1G9U0	1.1e-99	95.36	Protein-serine/threonine phosphatase OS=Cucurbita moschata OX=3662 GN=LOC1114522...	[more]
A0A6J1K8Q5	1.9e-99	94.85	Protein-serine/threonine phosphatase OS=Cucurbita maxima OX=3661 GN=LOC111492703...	[more]
A0A2P5FAG2	4.8e-95	88.14	Protein-serine/threonine phosphatase OS=Trema orientale OX=63057 GN=TorRG33x02_0...	[more]

BLAST of MS018849 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G73820.1	4.7e-87	77.84	Ssu72-like family protein	[more]

InterPro

Analysis Name: InterPro Annotations of Bitter gourd (TR) v1
Date Performed: 2021-10-25

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR006811	RNA polymerase II subunit A	PFAM	PF04722	Ssu72	coord: 4..194 e-value: 2.2E-77 score: 259.0
IPR006811	RNA polymerase II subunit A	PANTHER	PTHR20383	RNA POLYMERASE II SUBUNIT A C-TERMINAL DOMAIN PHOSPHATASE	coord: 4..194
None	No IPR available	GENE3D	3.40.50.2300		coord: 1..70 e-value: 3.1E-16 score: 61.4 coord: 71..194 e-value: 1.2E-39 score: 137.3
None	No IPR available	PANTHER	PTHR20383:SF9	RNA POLYMERASE II SUBUNIT A C-TERMINAL DOMAIN PHOSPHATASE SSU72	coord: 4..194

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
MS018849.1	MS018849.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006397	mRNA processing
cellular_component	GO:0005634	nucleus
molecular_function	GO:0004721	phosphoprotein phosphatase activity