MS018843 (gene) Bitter gourd (TR) v1

Overview


Name	MS018843
Type	gene
Organism	Momordica charantia cv. TR (Bitter gourd (TR) v1)
Description	zinc finger protein SHOOT GRAVITROPISM 5-like
Location	scaffold14: 278558 .. 280614 (+)
RNA-Seq Expression	MS018843
Synteny	MS018843

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGATAGCCAATACCTCCCCATCGTCTCTTCCTTCCTCCGAACCTTTTTCTTGCTTAGAAAATGGAAACAGCAACGTTAGCAAGAGGAAGAGAAGACCCGCGGGAACCCCAGGTAGGATTTCTCAATAAATAATGTGTATGGTGTGGGTGTTTTTGTTTTGGGCTGGGTATGTATTAATTAAGCCAAGTGATCCATCCTGGGGCGGTACAGATCCGGATGCAGAGGTGGTGTCTCTGTCCCCAAAAACGCTGCTAGAATCGGATCGGTACGTGTGTGAGATCTGCAACCAGGGATTTCAGCGGGACCAGAACCTGCAGATGCACAGGAGGAGGCACAAGGTGCCGTGGAAGCTGCTCAAGAGGGAGACGCCGGTGGTGAGGAAGAGGGTTTTCGTGTGCCCGGAGCCCACGTGCTTGCACCACGACCCATGCCACGCCCTCGGGGATCTGGTTGGCATCAAGAAGCACTTCAGAAGGAAGCACAGCAACCACAAGCAATGGGTCTGTGAAAAATGCTCCAAGGGCTACGCCGTCCAATCCGATTACAAGGCCCATCTCAAAACCTGCGGCACCAGAGGCCACTCTTGCGATTGCGGCCGCGTTTTCTCAAGGTACTCTTCTCTCTCCTATTTCCACTAATTCATTCATTAATTCATTAATTCATTAATTACTCTCTCCACTTCTCTCCTCATCCCCTATACATATTACATATATATTTCCTATTTATAATATATATACTTATATATATATATATATNAAAGAAAAATAATGGGCGACTGTTTCTGTGTTTTTGACCTAAAAAGGAAAAGAGAGAACAAACGATCGCTCCTTTGTAATTTGACACATTTCCCAAAGATCTGCCTTCGCCCTTGTGGTTTGTTTCAAATCCTTCTTTGGCCCCCAATTAAAACCCGCAGCTTCCGGTTTAAGATTATTTTAATTTAATGTCAACGTATGCGAAATGCGATAAATATTGAATAAATCCCCACACCAAATCCGAGTAATGATTAGCTTAGCTTTCAGCGCTAGCTACATTTAATTAATGATATATTATATACATACACCCCCACTTTTCATTTTCGAACTGAACTGGTCAACCATGTTTCAACTCAAACTATACATAATTTTACTGGTGTCTGAAATTAATTAATTGGGTTATAAATTCGATATGATGTTAATTATGCATAGTCTTAATTTGTTGATGTGATGATAGGGTGGAGAGCTTTATAGAGCACCAAGATGCTTGCAATATGGGGCATCTCCGGGCAGAATCCCAAAGCCTCCAAGCCGCCGCATGTTTGTCCCGAACAGCCTCCAGCCCCAGCCCCTCCAGCGATACCAACTTCAGCAGCGCCCCCAATTGGTCTGCCGCTCTCATACCGCCACCTCCCACTTTGAAGCACCCACCTCCAGCTGCCCCTACCCACGACTCCAACAACAGCATTATTAATAATAATAATAATAATAATAATAGTAATGCCTGCGCCTCACCCTTATATCACAATTTAGACCTCAAACTCTCGACTACATCATCAAACGCTGTCGACGCTTCCTCAAACAGATCATCGCCCAGTAAAGGGAATAACAACAACAATAAAGGTTCTTCAACCCAACTGCAGCTTTCCATTGGTTCGTGTGACTTTAGTTGTTCTCCAGGAGAAGGGGAAGATAAGGCGGTGGCAGCGGACGTTAGAGAAGAAGCTCGGGAGCAGCTGAGGGTGGCGATGGCAGAGAAGGAGTACGCGGAGGAAGCAAGGCAGCAAGCGAAGCGTCAAATCGAAATGGCAGAGCAAGAGTTTGCGAATGCGAAGAGAATGCGGCAGCAGGCGGCGGCCGAGTTGGACAAGGCTACAGCTCTTAAACAAGCAGCAATCAAACAGATCAACTCAACCATTCTTGAGATCACTTGTCAAGCTTGCCGGAAGCAATTTCAAGCCACCGCAACGGCGGATCATCATGACAACTCCTTGGCATTCAGTTATGTGTCCTCCGTCATAACAACCGAAGGTGAAGTAGACAAACATCATTCAACCCTTATACCTAAGCCCACCAATAAT

mRNA sequence

ATGATAGCCAATACCTCCCCATCGTCTCTTCCTTCCTCCGAACCTTTTTCTTGCTTAGAAAATGGAAACAGCAACGTTAGCAAGAGGAAGAGAAGACCCGCGGGAACCCCAGATCCGGATGCAGAGGTGGTGTCTCTGTCCCCAAAAACGCTGCTAGAATCGGATCGGTACGTGTGTGAGATCTGCAACCAGGGATTTCAGCGGGACCAGAACCTGCAGATGCACAGGAGGAGGCACAAGGTGCCGTGGAAGCTGCTCAAGAGGGAGACGCCGGTGGTGAGGAAGAGGGTTTTCGTGTGCCCGGAGCCCACGTGCTTGCACCACGACCCATGCCACGCCCTCGGGGATCTGGTTGGCATCAAGAAGCACTTCAGAAGGAAGCACAGCAACCACAAGCAATGGGTCTGTGAAAAATGCTCCAAGGGCTACGCCGTCCAATCCGATTACAAGGCCCATCTCAAAACCTGCGGCACCAGAGGCCACTCTTGCGATTGCGGCCGCGTTTTCTCAAGGGTGGAGAGCTTTATAGAGCACCAAGATGCTTGCAATATGGGGCATCTCCGGGCAGAATCCCAAAGCCTCCAAGCCGCCGCATGTTTGTCCCGAACAGCCTCCAGCCCCAGCCCCTCCAGCGATACCAACTTCAGCAGCGCCCCCAATTGGTCTGCCGCTCTCATACCGCCACCTCCCACTTTGAAGCACCCACCTCCAGCTGCCCCTACCCACGACTCCAACAACAGCATTATTAATAATAATAATAATAATAATAATAGTAATGCCTGCGCCTCACCCTTATATCACAATTTAGACCTCAAACTCTCGACTACATCATCAAACGCTGTCGACGCTTCCTCAAACAGATCATCGCCCAGTAAAGGGAATAACAACAACAATAAAGGTTCTTCAACCCAACTGCAGCTTTCCATTGGTTCGTGTGACTTTAGTTGTTCTCCAGGAGAAGGGGAAGATAAGGCGGTGGCAGCGGACGTTAGAGAAGAAGCTCGGGAGCAGCTGAGGGTGGCGATGGCAGAGAAGGAGTACGCGGAGGAAGCAAGGCAGCAAGCGAAGCGTCAAATCGAAATGGCAGAGCAAGAGTTTGCGAATGCGAAGAGAATGCGGCAGCAGGCGGCGGCCGAGTTGGACAAGGCTACAGCTCTTAAACAAGCAGCAATCAAACAGATCAACTCAACCATTCTTGAGATCACTTGTCAAGCTTGCCGGAAGCAATTTCAAGCCACCGCAACGGCGGATCATCATGACAACTCCTTGGCATTCAGTTATGTGTCCTCCGTCATAACAACCGAAGGTGAAGTAGACAAACATCATTCAACCCTTATACCTAAGCCCACCAATAAT

Coding sequence (CDS)

ATGATAGCCAATACCTCCCCATCGTCTCTTCCTTCCTCCGAACCTTTTTCTTGCTTAGAAAATGGAAACAGCAACGTTAGCAAGAGGAAGAGAAGACCCGCGGGAACCCCAGATCCGGATGCAGAGGTGGTGTCTCTGTCCCCAAAAACGCTGCTAGAATCGGATCGGTACGTGTGTGAGATCTGCAACCAGGGATTTCAGCGGGACCAGAACCTGCAGATGCACAGGAGGAGGCACAAGGTGCCGTGGAAGCTGCTCAAGAGGGAGACGCCGGTGGTGAGGAAGAGGGTTTTCGTGTGCCCGGAGCCCACGTGCTTGCACCACGACCCATGCCACGCCCTCGGGGATCTGGTTGGCATCAAGAAGCACTTCAGAAGGAAGCACAGCAACCACAAGCAATGGGTCTGTGAAAAATGCTCCAAGGGCTACGCCGTCCAATCCGATTACAAGGCCCATCTCAAAACCTGCGGCACCAGAGGCCACTCTTGCGATTGCGGCCGCGTTTTCTCAAGGGTGGAGAGCTTTATAGAGCACCAAGATGCTTGCAATATGGGGCATCTCCGGGCAGAATCCCAAAGCCTCCAAGCCGCCGCATGTTTGTCCCGAACAGCCTCCAGCCCCAGCCCCTCCAGCGATACCAACTTCAGCAGCGCCCCCAATTGGTCTGCCGCTCTCATACCGCCACCTCCCACTTTGAAGCACCCACCTCCAGCTGCCCCTACCCACGACTCCAACAACAGCATTATTAATAATAATAATAATAATAATAATAGTAATGCCTGCGCCTCACCCTTATATCACAATTTAGACCTCAAACTCTCGACTACATCATCAAACGCTGTCGACGCTTCCTCAAACAGATCATCGCCCAGTAAAGGGAATAACAACAACAATAAAGGTTCTTCAACCCAACTGCAGCTTTCCATTGGTTCGTGTGACTTTAGTTGTTCTCCAGGAGAAGGGGAAGATAAGGCGGTGGCAGCGGACGTTAGAGAAGAAGCTCGGGAGCAGCTGAGGGTGGCGATGGCAGAGAAGGAGTACGCGGAGGAAGCAAGGCAGCAAGCGAAGCGTCAAATCGAAATGGCAGAGCAAGAGTTTGCGAATGCGAAGAGAATGCGGCAGCAGGCGGCGGCCGAGTTGGACAAGGCTACAGCTCTTAAACAAGCAGCAATCAAACAGATCAACTCAACCATTCTTGAGATCACTTGTCAAGCTTGCCGGAAGCAATTTCAAGCCACCGCAACGGCGGATCATCATGACAACTCCTTGGCATTCAGTTATGTGTCCTCCGTCATAACAACCGAAGGTGAAGTAGACAAACATCATTCAACCCTTATACCTAAGCCCACCAATAAT

Protein sequence

MIANTSPSSLPSSEPFSCLENGNSNVSKRKRRPAGTPDPDAEVVSLSPKTLLESDRYVCEICNQGFQRDQNLQMHRRRHKVPWKLLKRETPVVRKRVFVCPEPTCLHHDPCHALGDLVGIKKHFRRKHSNHKQWVCEKCSKGYAVQSDYKAHLKTCGTRGHSCDCGRVFSRVESFIEHQDACNMGHLRAESQSLQAAACLSRTASSPSPSSDTNFSSAPNWSAALIPPPPTLKHPPPAAPTHDSNNSIINNNNNNNNSNACASPLYHNLDLKLSTTSSNAVDASSNRSSPSKGNNNNNKGSSTQLQLSIGSCDFSCSPGEGEDKAVAADVREEAREQLRVAMAEKEYAEEARQQAKRQIEMAEQEFANAKRMRQQAAAELDKATALKQAAIKQINSTILEITCQACRKQFQATATADHHDNSLAFSYVSSVITTEGEVDKHHSTLIPKPTNN

Homology

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BLAST of MS018843 vs. NCBI nr
Match: XP_022136998.1 (protein SHOOT GRAVITROPISM 5-like [Momordica charantia])

HSP 1 Score: 873.6 bits (2256), Expect = 7.3e-250
Identity = 450/452 (99.56%), Postives = 450/452 (99.56%), Query Frame = 0


Query: 1   MIANTSPSSLPSSEPFSCLENGNSNVSKRKRRPAGTPDPDAEVVSLSPKTLLESDRYVCE 60
           MIANTSPSSLPSSEPFSCLENGNSNVSKRKRRPAGTPDPDAEVVSLSPKTLLESDRYVCE
Sbjct: 1   MIANTSPSSLPSSEPFSCLENGNSNVSKRKRRPAGTPDPDAEVVSLSPKTLLESDRYVCE 60

Query: 61  ICNQGFQRDQNLQMHRRRHKVPWKLLKRETPVVRKRVFVCPEPTCLHHDPCHALGDLVGI 120
           ICNQGFQRDQNLQMHRRRHKVPWKLLKRETPVVRKRVFVCPEPTCLHHDPCHALGDLVGI
Sbjct: 61  ICNQGFQRDQNLQMHRRRHKVPWKLLKRETPVVRKRVFVCPEPTCLHHDPCHALGDLVGI 120

Query: 121 KKHFRRKHSNHKQWVCEKCSKGYAVQSDYKAHLKTCGTRGHSCDCGRVFSRVESFIEHQD 180
           KKHFRRKHSNHKQWVCEKCSKGYAVQSDYKAHLKTCGTRGHSCDCGRVFSRVESFIEHQD
Sbjct: 121 KKHFRRKHSNHKQWVCEKCSKGYAVQSDYKAHLKTCGTRGHSCDCGRVFSRVESFIEHQD 180

Query: 181 ACNMGHLRAESQSLQAAACLSRTASSPSPSSDTNFSSAPNWSAALIPPPPTLKHPPPAAP 240
           ACNMGHLRAESQSLQAAACLSRTASSPSPSSDTNFSS PNWSAALIPPPPTLKHPPPAAP
Sbjct: 181 ACNMGHLRAESQSLQAAACLSRTASSPSPSSDTNFSSGPNWSAALIPPPPTLKHPPPAAP 240

Query: 241 THDSNNSIINNNNNNNNSNACASPLYHNLDLKLSTTSSNAVDASSNRSSPSKGNNNNNKG 300
           THDSNNSII NNNNNNNSNACASPLYHNLDLKLSTTSSNAVDASSNRSSPSKGNNNNNKG
Sbjct: 241 THDSNNSIIINNNNNNNSNACASPLYHNLDLKLSTTSSNAVDASSNRSSPSKGNNNNNKG 300

Query: 301 SSTQLQLSIGSCDFSCSPGEGEDKAVAADVREEAREQLRVAMAEKEYAEEARQQAKRQIE 360
           SSTQLQLSIGSCDFSCSPGEGEDKAVAADVREEAREQLRVAMAEKEYAEEARQQAKRQIE
Sbjct: 301 SSTQLQLSIGSCDFSCSPGEGEDKAVAADVREEAREQLRVAMAEKEYAEEARQQAKRQIE 360

Query: 361 MAEQEFANAKRMRQQAAAELDKATALKQAAIKQINSTILEITCQACRKQFQATATADHHD 420
           MAEQEFANAKRMRQQAAAELDKATALKQAAIKQINSTILEITCQACRKQFQATATADHHD
Sbjct: 361 MAEQEFANAKRMRQQAAAELDKATALKQAAIKQINSTILEITCQACRKQFQATATADHHD 420

Query: 421 NSLAFSYVSSVITTEGEVDKHHSTLIPKPTNN 453
           NSLAFSYVSSVITTEGEVDKHHSTLIPKPTNN
Sbjct: 421 NSLAFSYVSSVITTEGEVDKHHSTLIPKPTNN 452

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BLAST of MS018843 vs. NCBI nr
Match: XP_011649488.1 (zinc finger protein SHOOT GRAVITROPISM 5 [Cucumis sativus] >KGN63935.1 hypothetical protein Csa_013132 [Cucumis sativus])

HSP 1 Score: 617.1 bits (1590), Expect = 1.2e-172
Identity = 360/481 (74.84%), Postives = 383/481 (79.63%), Query Frame = 0


Query: 1   MIANTSPSSLP----SSEPFSCLENGNSNVSKRKRRPAGTPDPDAEVVSLSPKTLLESDR 60
           MI NT+ S+ P    SSEP+SCLENGN+N +KRKRRPAGTPDPDAEVVSLSPKTLLESDR
Sbjct: 1   MIGNTATSASPLLPNSSEPYSCLENGNNNNNKRKRRPAGTPDPDAEVVSLSPKTLLESDR 60

Query: 61  YVCEICNQGFQRDQNLQMHRRRHKVPWKLLKRETPVVRKRVFVCPEPTCLHHDPCHALGD 120
           YVCEICNQGFQRDQNLQMHRRRHKVPWKLLKRE+PVVRKRVFVCPEPTCLHHDPCHALGD
Sbjct: 61  YVCEICNQGFQRDQNLQMHRRRHKVPWKLLKRESPVVRKRVFVCPEPTCLHHDPCHALGD 120

Query: 121 LVGIKKHFRRKHSNHKQWVCEKCSKGYAVQSDYKAHLKTCGTRGHSCDCGRVFSRVESFI 180
           LVGIKKHFRRKHSNHKQWVCEKCSKGYAVQSDYKAHLKTCGTRGHSCDCGRVFSRVESFI
Sbjct: 121 LVGIKKHFRRKHSNHKQWVCEKCSKGYAVQSDYKAHLKTCGTRGHSCDCGRVFSRVESFI 180

Query: 181 EHQDACNMGHLRAESQSLQAAACLSRTASSPSPSSDTNFSSAP----NWSAALIPPPPTL 240
           EHQDACNMGHLR ESQ     ACLSRTASSPSPSSDTNFSS P    NW  AL+ PP TL
Sbjct: 181 EHQDACNMGHLRQESQ--VQPACLSRTASSPSPSSDTNFSSTPAPSSNWH-ALVTPPLTL 240

Query: 241 KHPPPA---APTHDSNNSIINNNNNNNNSNACASPLYHNLDLKLSTTSSNAVDASSNRSS 300
           K P  A    PT DS        NNNNNS+       HNLDLKLS T+SN V+  +N   
Sbjct: 241 K-PVDAIFLTPTGDS--------NNNNNSD-------HNLDLKLS-TASNGVEGRNN--- 300

Query: 301 PSKGNNNNNKGSSTQLQLSIGSCDFSCSPGE--GEDKAVAADVREEAREQLRVAMAEKEY 360
                NNN KGSST+L+LS+GS DF     +    D   A DVREEARE+LRVAMAEK Y
Sbjct: 301 ----YNNNKKGSSTKLELSMGSFDFEDEKKKMLKLDDGGAGDVREEAREELRVAMAEKAY 360

Query: 361 AEEARQQAKRQIEMAEQEFANAKRMRQQAAAELDKATALKQAAIKQINSTILEITCQACR 420
           AEEAR+QAKRQIEMAE+EF NAKRMRQQA AELDKATALKQAAIKQINSTILEITCQAC+
Sbjct: 361 AEEARKQAKRQIEMAEEEFGNAKRMRQQAQAELDKATALKQAAIKQINSTILEITCQACQ 420

Query: 421 KQFQA--------------TATADHHDN--SLAFSYVSSVITTEGEVDKHHSTLIPKPTN 453
           KQFQA              T+ A  HDN  S+AFSYVSSVITTEGEV+K  ST+IPKP N
Sbjct: 421 KQFQAKTKTKTKTTTTTTSTSAATDHDNYSSVAFSYVSSVITTEGEVEKDQSTIIPKPPN 454

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BLAST of MS018843 vs. NCBI nr
Match: XP_008452902.1 (PREDICTED: protein SHOOT GRAVITROPISM 5-like [Cucumis melo] >KAA0036036.1 protein SHOOT GRAVITROPISM 5-like [Cucumis melo var. makuwa] >TYJ98839.1 protein SHOOT GRAVITROPISM 5-like [Cucumis melo var. makuwa])

HSP 1 Score: 614.8 bits (1584), Expect = 6.1e-172
Identity = 357/484 (73.76%), Postives = 381/484 (78.72%), Query Frame = 0


Query: 1   MIANTSPSSLP----SSEPFSCLENGNSNV-SKRKRRPAGTPDPDAEVVSLSPKTLLESD 60
           MI NT+ S+ P    SSEP+SCLENGN+N+ +KRKRRPAGTPDPDAEVVSLSPKTLLESD
Sbjct: 1   MIGNTATSASPLLPNSSEPYSCLENGNNNINNKRKRRPAGTPDPDAEVVSLSPKTLLESD 60

Query: 61  RYVCEICNQGFQRDQNLQMHRRRHKVPWKLLKRETPVVRKRVFVCPEPTCLHHDPCHALG 120
           RYVCEICNQGFQRDQNLQMHRRRHKVPWKLLKRE+PVVRKRVFVCPEPTCLHHDPCHALG
Sbjct: 61  RYVCEICNQGFQRDQNLQMHRRRHKVPWKLLKRESPVVRKRVFVCPEPTCLHHDPCHALG 120

Query: 121 DLVGIKKHFRRKHSNHKQWVCEKCSKGYAVQSDYKAHLKTCGTRGHSCDCGRVFSRVESF 180
           DLVGIKKHFRRKHSNHKQWVCEKCSKGYAVQSDYKAHLKTCGTRGHSCDCGRVFSRVESF
Sbjct: 121 DLVGIKKHFRRKHSNHKQWVCEKCSKGYAVQSDYKAHLKTCGTRGHSCDCGRVFSRVESF 180

Query: 181 IEHQDACNMGHLRAESQSLQAAACLSRTASSPSPSSDTNFSSAP----NWSAALIPPPPT 240
           IEHQDACNMGHLR E Q     ACLSRTASSPSPSSDTNFSS P    NW  AL+  PPT
Sbjct: 181 IEHQDACNMGHLRQEPQ--VQPACLSRTASSPSPSSDTNFSSTPAPSNNW-PALVTAPPT 240

Query: 241 LKHPPPA---APTHDSNNSIINNNNNNNNSNACASPLYHNLDLKLSTTSSNAVDASSNRS 300
           LK P  A    PT DS      NNNNNN+         HNLDLKLST S+          
Sbjct: 241 LK-PVDAIFLTPTGDS------NNNNNND---------HNLDLKLSTASNGV-------- 300

Query: 301 SPSKGNNNNNKGSSTQLQLSIGSCDFSCSPGE--GEDKAVAADVREEAREQLRVAMAEKE 360
              + NNN+NKGSST+L+LS+GS DF     +    D   A DVREEARE+LRVAMAEK 
Sbjct: 301 -KGRNNNNSNKGSSTKLELSMGSFDFEDEKKKMLKLDDGGAGDVREEAREELRVAMAEKA 360

Query: 361 YAEEARQQAKRQIEMAEQEFANAKRMRQQAAAELDKATALKQAAIKQINSTILEITCQAC 420
           YAEEAR+QAKRQIEMAE+EF NAKRMRQQA AELDKATALKQAAIKQINSTILEITCQAC
Sbjct: 361 YAEEARKQAKRQIEMAEEEFGNAKRMRQQAQAELDKATALKQAAIKQINSTILEITCQAC 420

Query: 421 RKQFQA----------------TATADHHDN--SLAFSYVSSVITTEGEVDKHHSTLIPK 453
           +KQFQA                T+ A  HDN  S+AFSYVSSVITTEGEV+K  ST+IPK
Sbjct: 421 QKQFQAKAKTKTKTTTTTTTTTTSAATDHDNYSSVAFSYVSSVITTEGEVEKDQSTIIPK 456

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BLAST of MS018843 vs. NCBI nr
Match: XP_038893517.1 (zinc finger protein SHOOT GRAVITROPISM 5-like [Benincasa hispida])

HSP 1 Score: 614.4 bits (1583), Expect = 7.9e-172
Identity = 355/480 (73.96%), Postives = 380/480 (79.17%), Query Frame = 0


Query: 1   MIAN--TSPSSLPSSEPFSCLENGNSNVSKRKRRPAGTPDPDAEVVSLSPKTLLESDRYV 60
           MI N  TS S +  SEP+SCLENGN+N +KRKRRPAGTPDPDAEVVSLSPKTLLESDRYV
Sbjct: 1   MIGNMATSASPVLPSEPYSCLENGNNNNNKRKRRPAGTPDPDAEVVSLSPKTLLESDRYV 60

Query: 61  CEICNQGFQRDQNLQMHRRRHKVPWKLLKRETPVVRKRVFVCPEPTCLHHDPCHALGDLV 120
           CEICNQGFQRDQNLQMHRRRHKVPWKLLKRETPVVRKRVFVCPEPTCLHHDPCHALGDLV
Sbjct: 61  CEICNQGFQRDQNLQMHRRRHKVPWKLLKRETPVVRKRVFVCPEPTCLHHDPCHALGDLV 120

Query: 121 GIKKHFRRKHSNHKQWVCEKCSKGYAVQSDYKAHLKTCGTRGHSCDCGRVFSRVESFIEH 180
           GIKKHFRRKHSNHKQWVCEKCSKGYAVQSDYKAHLKTCGTRGHSCDCGRVFSRVESFIEH
Sbjct: 121 GIKKHFRRKHSNHKQWVCEKCSKGYAVQSDYKAHLKTCGTRGHSCDCGRVFSRVESFIEH 180

Query: 181 QDACNMGHL-RAESQSLQAAACLSRTASSPSPSSDTNFSSAP--NWSAALIPPPPTLKHP 240
           QDACNMGHL R ESQ++Q  ACLSRTASSPSPSSDTNFSSA   NW A  +  PPTLK P
Sbjct: 181 QDACNMGHLIRQESQTIQ-PACLSRTASSPSPSSDTNFSSAAPNNWPA--LVAPPTLK-P 240

Query: 241 PPA---APTHDSNNSIINNNNNNNNSNACASPLYHNLDLKLSTTSSNAVDASSNRSSPSK 300
             A   APT DSNN+ ++NN+             HNLDLKLS T+SN V+          
Sbjct: 241 VDAIFLAPTDDSNNNTVSNND-------------HNLDLKLS-TASNGVE---------- 300

Query: 301 GNNNNNKGSSTQLQLSIGSCDF----SCSPGEGEDKAVAADVREEAREQLRVAMAEKEYA 360
               NNKGSST+LQLSIGS DF         +G  +  A DVREEARE+LRVAM EK YA
Sbjct: 301 -GRGNNKGSSTKLQLSIGSFDFGDKKKMDQKKGGVRGGAGDVREEAREELRVAMVEKAYA 360

Query: 361 EEARQQAKRQIEMAEQEFANAKRMRQQAAAELDKATALKQAAIKQINSTILEITCQACRK 420
           EEARQQAKRQIE+AE+EF NAKRMRQQA AELDKATALKQAAIKQINSTILEITCQAC+K
Sbjct: 361 EEARQQAKRQIEIAEEEFGNAKRMRQQAQAELDKATALKQAAIKQINSTILEITCQACQK 420

Query: 421 QFQA----------------TATADHHDNSLAFSYVSSVITTEGEVDKHHSTLIPKPTNN 453
           QFQA                +A  DH + S+AFSYVSSVITTEGEV+K   T+IPKP NN
Sbjct: 421 QFQAKTKPTTTTTTTTTTTTSAATDHDNYSVAFSYVSSVITTEGEVEKDQPTIIPKPPNN 451

[Close]

BLAST of MS018843 vs. NCBI nr
Match: XP_023518971.1 (protein indeterminate-domain 16-like isoform X1 [Cucurbita pepo subsp. pepo] >XP_023518972.1 protein indeterminate-domain 16-like isoform X1 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 607.1 bits (1564), Expect = 1.3e-169
Identity = 348/469 (74.20%), Postives = 371/469 (79.10%), Query Frame = 0


Query: 1   MIANTSPS---SLPSSEPFSCLENGNSNVSKRKRRPAGTPDPDAEVVSLSPKTLLESDRY 60
           MIANT  S   SLPSSEP+SCLENG+SN +KRKRRPAGTPDPDAEVVSLSPKTLLESDRY
Sbjct: 1   MIANTPASASLSLPSSEPYSCLENGSSNSNKRKRRPAGTPDPDAEVVSLSPKTLLESDRY 60

Query: 61  VCEICNQGFQRDQNLQMHRRRHKVPWKLLKRETPVVRKRVFVCPEPTCLHHDPCHALGDL 120
           VCEICNQGFQRDQNLQMHRRRHKVPWKLLKRETPVVRKRVFVCPEP+CLHHDPCHALGDL
Sbjct: 61  VCEICNQGFQRDQNLQMHRRRHKVPWKLLKRETPVVRKRVFVCPEPSCLHHDPCHALGDL 120

Query: 121 VGIKKHFRRKHSNHKQWVCEKCSKGYAVQSDYKAHLKTCGTRGHSCDCGRVFSRVESFIE 180
           VGIKKHFRRKHSNHKQWVCEKCSK YAVQSDYKAHLKTCGTRGHSCDCGRVFSRVESFIE
Sbjct: 121 VGIKKHFRRKHSNHKQWVCEKCSKAYAVQSDYKAHLKTCGTRGHSCDCGRVFSRVESFIE 180

Query: 181 HQDACNMGHLRAESQSLQAAACLSRTASSPSPSSDTNFSSAPNWSAALIPPPPTLKHPPP 240
           HQDACNMGHLR ESQ+L   ACLSRTASSPSP SD NF++           PPT      
Sbjct: 181 HQDACNMGHLRQESQTLH-PACLSRTASSPSPPSDANFTA-----------PPTAIF--- 240

Query: 241 AAPTHDSNNSIINNNNNNNNSNACASPLYHNLDLKLSTTSSNAVDASSNRSSPSKGNNNN 300
            APT D   SIINNNNNNNN++      +HNLDLKLST++S                   
Sbjct: 241 LAPTDD---SIINNNNNNNNNS------HHNLDLKLSTSTS------------------- 300

Query: 301 NKGSSTQLQLSIGSCDFSCSPGEGEDKAVAAD-----------VREEAREQLRVAMAEKE 360
           N+GSSTQLQLSIGSCDF    G+ + +    D           VREEARE+LR AMAEK 
Sbjct: 301 NEGSSTQLQLSIGSCDF----GDKKKRVQLLDDEKGGGRGPGGVREEAREELREAMAEKA 360

Query: 361 YAEEARQQAKRQIEMAEQEFANAKRMRQQAAAELDKATALKQAAIKQINSTILEITCQAC 420
           YAEEARQQAKRQIEMAE+EF NAKRMRQQA AELDKATALKQAAIKQINST+LEITCQAC
Sbjct: 361 YAEEARQQAKRQIEMAEEEFVNAKRMRQQAQAELDKATALKQAAIKQINSTLLEITCQAC 420

Query: 421 RKQFQA--------TATADHHDNSLAFSYVSSVITTEGEVDKHHSTLIP 448
           +KQFQA        TA AD HD S+AFSYVSSVITTEGEV+K  +TLIP
Sbjct: 421 QKQFQAKPTTTTTTTAPAD-HDTSVAFSYVSSVITTEGEVEKDQATLIP 421

[Close]

BLAST of MS018843 vs. ExPASy Swiss-Prot
Match: F4IPE3 (Zinc finger protein SHOOT GRAVITROPISM 5 OS=Arabidopsis thaliana OX=3702 GN=SGR5 PE=1 SV=1)

HSP 1 Score: 411.8 bits (1057), Expect = 1.0e-113
Identity = 251/448 (56.03%), Postives = 312/448 (69.64%), Query Frame = 0


Query: 9   SLPSSEPF-SCLENG----NSNVSKRKRRPAGTPDPDAEVVSLSPKTLLESDRYVCEICN 68
           S  SS+PF S  ENG    N++  KRKRRPAGTPDPDAEVVSLSP+TLLESDRY+CEICN
Sbjct: 20  SSSSSDPFLSSSENGVTTTNTSTQKRKRRPAGTPDPDAEVVSLSPRTLLESDRYICEICN 79

Query: 69  QGFQRDQNLQMHRRRHKVPWKLLKRETPV-VRKRVFVCPEPTCLHHDPCHALGDLVGIKK 128
           QGFQRDQNLQMHRRRHKVPWKLLKR+  + V+KRV+VCPEPTCLHH+PCHALGDLVGIKK
Sbjct: 80  QGFQRDQNLQMHRRRHKVPWKLLKRDNNIEVKKRVYVCPEPTCLHHNPCHALGDLVGIKK 139

Query: 129 HFRRKHSNHKQWVCEKCSKGYAVQSDYKAHLKTCGTRGHSCDCGRVFSRVESFIEHQDAC 188
           HFRRKHSNHKQWVCE+CSKGYAVQSDYKAHLKTCGTRGHSCDCGRVFSRVESFIEHQD C
Sbjct: 140 HFRRKHSNHKQWVCERCSKGYAVQSDYKAHLKTCGTRGHSCDCGRVFSRVESFIEHQDNC 199

Query: 189 NMGHLRAE-----SQSLQAAACLSRTASSPS-PSSDTNFSSAPNWSAALIPPPPTLKHPP 248
           +   +  E       ++   AC SRTAS+ S PSS+TN+      + A+  P P      
Sbjct: 200 SARRVHREPPRPPQTAVTVPACSSRTASTVSTPSSETNYGG----TVAVTTPQPL----- 259

Query: 249 PAAPTHDSNNSIINNNNNNNNSNACASPLYHNLDLKLSTTSSNAVDASSNRSSPSK--GN 308
              P H   +S I  N++NN           NL+L+L   SSN      N+    K   +
Sbjct: 260 EGRPIHQRISSSILTNSSNN----------LNLELQLLPLSSNQNPNQENQQQKVKEPSH 319

Query: 309 NNNNKGSSTQLQLSIG-SCDFSCSPGEGEDKAVAADVREEAREQLRVAMAEKEYAEEARQ 368
           ++N+   +T L LSI  S  +         K + A     + + +++AM EK YAEEA++
Sbjct: 320 HHNHNHDTTNLNLSIAPSSSYQHYNNFDRIKEIMA-----SEQIMKIAMKEKAYAEEAKR 379

Query: 369 QAKRQIEMAEQEFANAKRMRQQAAAELDKATALKQAAIKQINSTILEITCQACRKQFQAT 428
           +AKRQ E+AE EFANAK++RQ+A AEL++A  LK+ ++K+I+STI+++TCQ C+ QFQA 
Sbjct: 380 EAKRQREIAENEFANAKKIRQKAQAELERAKFLKEQSMKKISSTIMQVTCQTCKGQFQAV 439

Query: 429 A--TADHHDNSLAFSYVSSVITTEGEVD 440
           A   A   + SL  SY+SS   T+GE++
Sbjct: 440 AVPAATADETSLVVSYMSSA-NTDGELE 442

[Close]

BLAST of MS018843 vs. ExPASy Swiss-Prot
Match: Q9C9X7 (Protein indeterminate-domain 14 OS=Arabidopsis thaliana OX=3702 GN=IDD14 PE=1 SV=1)

HSP 1 Score: 365.5 bits (937), Expect = 8.4e-100
Identity = 225/443 (50.79%), Postives = 277/443 (62.53%), Query Frame = 0


Query: 11  PSSEPFSCLENGNSN--VSKRKRRPAGTPDPDAEVVSLSPKTLLESDRYVCEICNQGFQR 70
           PSS     L +GN      KRKRRPAGTPDP+AEVVSLSP+TLLESDRYVCEICNQGFQR
Sbjct: 22  PSSSSSDLLPDGNGTAVTQKRKRRPAGTPDPEAEVVSLSPRTLLESDRYVCEICNQGFQR 81

Query: 71  DQNLQMHRRRHKVPWKLLKRET-PVVRKRVFVCPEPTCLHHDPCHALGDLVGIKKHFRRK 130
           DQNLQMHRRRHKVPWKLLKRET   VRKRV+VCPEPTCLHH+PCHALGDLVGIKKHFRRK
Sbjct: 82  DQNLQMHRRRHKVPWKLLKRETNEEVRKRVYVCPEPTCLHHNPCHALGDLVGIKKHFRRK 141

Query: 131 HSNHKQWVCEKCSKGYAVQSDYKAHLKTCGTRGHSCDCGRVFSRVESFIEHQDACNMGHL 190
           HSNHKQW+CE+CSKGYAVQSDYKAHLKTCGTRGHSCDCGRVFSRVESFIEHQD C +   
Sbjct: 142 HSNHKQWICERCSKGYAVQSDYKAHLKTCGTRGHSCDCGRVFSRVESFIEHQDTCTVRRS 201

Query: 191 RAESQSL----QAAACLSRTASSPSPSSDTNFSSAPNWSAALIPPPPTLKHPPPAAPTHD 250
           +  +  L    Q     ++TAS+   + + + S  P     ++P  P  +   P  P+  
Sbjct: 202 QPSNHRLHEQQQHTTNATQTASTAENNENGDLSIGP-----ILPGHPLQRRQSP--PSEQ 261

Query: 251 SNNSIINNNNNNNNSNACASPLYHNLDLKLSTTSSNAVDASSNRSSPSKGNNNNNKGSST 310
             ++++              P   N  ++L    S                   N    T
Sbjct: 262 QPSTLL-------------YPFVTNGSIELQLLPS------------------RNCADET 321

Query: 311 QLQLSIGSCDFSCSPGEGEDKAVAADVREEAREQLRVAMAEKEYAEEARQQAKRQIEMAE 370
            L LSIG+           D+   ++V +++ E+   ++      EEAR++ KRQIE+AE
Sbjct: 322 SLSLSIGTM----------DQKTMSEVEKKSYEKGETSLER----EEARRETKRQIEIAE 381

Query: 371 QEFANAKRMRQQAAAELDKATALKQAAIKQINSTILEITCQACRKQFQATAT-------- 430
            EFA AKR+RQ A AEL KA   ++ A ++I++T+++ITC  C++ FQA A         
Sbjct: 382 LEFAEAKRIRQHARAELHKAHLFREEASRRISATMMQITCHNCKQHFQAPAALVPPPPQT 411

Query: 431 -ADHHDNSLAFSYVSSVITTEGE 438
                  SLA SY+SS  TTEGE
Sbjct: 442 HCTDESTSLAVSYMSSA-TTEGE 411

[Close]

BLAST of MS018843 vs. ExPASy Swiss-Prot
Match: Q9FRH4 (Protein indeterminate-domain 16 OS=Arabidopsis thaliana OX=3702 GN=IDD16 PE=2 SV=1)

HSP 1 Score: 359.0 bits (920), Expect = 7.9e-98
Identity = 216/407 (53.07%), Postives = 256/407 (62.90%), Query Frame = 0


Query: 38  DPDAEVVSLSPKTLLESDRYVCEICNQGFQRDQNLQMHRRRHKVPWKLLKRE--TPVVRK 97
           DPDAEVVSLSP+TLLESDRYVCEICNQGFQRDQNLQMHRRRHKVPWKLLKR+     VRK
Sbjct: 20  DPDAEVVSLSPRTLLESDRYVCEICNQGFQRDQNLQMHRRRHKVPWKLLKRDKKDEEVRK 79

Query: 98  RVFVCPEPTCLHHDPCHALGDLVGIKKHFRRKHSNHKQWVCEKCSKGYAVQSDYKAHLKT 157
           RV+VCPEPTCLHHDPCHALGDLVGIKKHFRRKHS HKQWVCE+CSKGYAVQSDYKAHLKT
Sbjct: 80  RVYVCPEPTCLHHDPCHALGDLVGIKKHFRRKHSVHKQWVCERCSKGYAVQSDYKAHLKT 139

Query: 158 CGTRGHSCDCGRVFSRVESFIEHQDACNMGHLRAESQSLQAAACLSRTASSPSPSSDTNF 217
           CG+RGHSCDCGRVFSRVESFIEHQD C                                 
Sbjct: 140 CGSRGHSCDCGRVFSRVESFIEHQDTC--------------------------------- 199

Query: 218 SSAPNWSAALIPPPPTLKHPPPAAPTHDSNNSIINNNNNNNNSNACASPLYHNLDLKLST 277
                          T++ P P    H   +++  +  +   S A   PL H L L    
Sbjct: 200 ---------------TIRQPQPTNHRHLQQHTMGLDAPSRTTSTASFGPLLHGLPLL--- 259

Query: 278 TSSNAVDASSNRSSPSKG---NNNNNKGSSTQLQLSIGSCDFSCSPGEGEDKAVAADVRE 337
                    SN+ SP+     N ++    S +LQLSIG    S      E +  +   +E
Sbjct: 260 ----RPPRPSNQHSPAFAYPFNASSAPFESLELQLSIGMARTSAQARHNEKRETSL-TKE 319

Query: 338 EAREQLRVAMAEKEYAEEARQQAKRQIEMAEQEFANAKRMRQQAAAELDKATALKQAAIK 397
            A E+ R        AEE RQ+AKRQIEMAE++F  AKR+R++A  EL+KA  +++ AIK
Sbjct: 320 RANEEAR-------KAEETRQEAKRQIEMAEKDFEKAKRIREEAKTELEKAHVVREEAIK 362

Query: 398 QINSTILEITCQACRKQFQATATADHHDNSLAFSYVSSVITTEGEVD 440
           +IN+T++EITC +C++ FQ   TAD   +SL  SYVSS  TTEGE +
Sbjct: 380 RINATMMEITCHSCKQLFQLPVTADESTSSLVMSYVSSA-TTEGECE 362

[Close]

BLAST of MS018843 vs. ExPASy Swiss-Prot
Match: Q9ZWA6 (Zinc finger protein MAGPIE OS=Arabidopsis thaliana OX=3702 GN=MGP PE=1 SV=1)

HSP 1 Score: 228.0 bits (580), Expect = 2.1e-58
Identity = 118/234 (50.43%), Postives = 157/234 (67.09%), Query Frame = 0


Query: 20  ENGNSNVSKRKRRPAGTPDPDAEVVSLSPKTLLESDRYVCEICNQGFQRDQNLQMHRRRH 79
           E+ N  + K+KR   G PDP+AEV++LSPKTL+ ++R++CEIC +GFQRDQNLQ+HRR H
Sbjct: 33  ESLNPPLVKKKRNLPGNPDPEAEVIALSPKTLMATNRFLCEICGKGFQRDQNLQLHRRGH 92

Query: 80  KVPWKLLKRETPVVRKRVFVCPEPTCLHHDPCHALGDLVGIKKHFRRKHSNHKQWVCEKC 139
            +PWKL +R +  VRKRV+VCPE +C+HH P  ALGDL GIKKHF RKH   K+W CEKC
Sbjct: 93  NLPWKLKQRTSKEVRKRVYVCPEKSCVHHHPTRALGDLTGIKKHFCRKH-GEKKWKCEKC 152

Query: 140 SKGYAVQSDYKAHLKTCGTRGHSCDCGRVFSRVESFIEHQDACNMGHLRAESQSLQAAAC 199
           +K YAVQSD+KAH KTCGTR + CDCG +FSR +SFI H+  C+   L  E+  L AA+ 
Sbjct: 153 AKRYAVQSDWKAHSKTCGTREYRCDCGTIFSRRDSFITHRAFCDA--LAEETARLNAASH 212

Query: 200 LSRTASSPSPSSDTNFSSAPNWSAALIPPPPTLKHPPPAAPTHDSNNSIINNNN 254
           L   A++   + + ++       +  +P PP+    PP    H  +   I  NN
Sbjct: 213 LKSFAATAGSNLNYHYLMGTLIPSPSLPQPPSFPFGPPQPQHHHHHQFPITTNN 263

[Close]

BLAST of MS018843 vs. ExPASy Swiss-Prot
Match: Q9LRW7 (Protein indeterminate-domain 11 OS=Arabidopsis thaliana OX=3702 GN=IDD11 PE=2 SV=1)

HSP 1 Score: 215.7 bits (548), Expect = 1.1e-54
Identity = 124/266 (46.62%), Postives = 170/266 (63.91%), Query Frame = 0


Query: 23  NSNVSKRKRRPAGTPDPDAEVVSLSPKTLLESDRYVCEICNQGFQRDQNLQMHRRRHKVP 82
           +S   K++R   G PDP++EV++LSPKTL+ ++R+VCEICN+GFQRDQNLQ+HRR H +P
Sbjct: 65  DSQTQKKRRNQPGNPDPESEVIALSPKTLMATNRFVCEICNKGFQRDQNLQLHRRGHNLP 124

Query: 83  WKLLKRET-PVVRKRVFVCPEPTCLHHDPCHALGDLVGIKKHFRRKHSNHKQWVCEKCSK 142
           WKL +R    V+RK+V+VCPE +C+HHDP  ALGDL GIKKHF RKH   K+W C+KCSK
Sbjct: 125 WKLKQRSNKEVIRKKVYVCPEASCVHHDPSRALGDLTGIKKHFCRKH-GEKKWKCDKCSK 184

Query: 143 GYAVQSDYKAHLKTCGTRGHSCDCGRVFSRVESFIEHQDACNMGHLRAESQSLQAAACLS 202
            YAVQSD KAH KTCGT+ + CDCG +FSR +SFI H+  C      AE  + +     +
Sbjct: 185 KYAVQSDCKAHSKTCGTKEYRCDCGTLFSRRDSFITHRAFC---EALAEETAREVVIPQN 244

Query: 203 RTASSPSPSSDTNFSSAPNWSAALIPPPPTLKHPPPAAPTHDSNNSIIN------NNNNN 262
           +  + P+P      +S P+         PT+     ++ +H  N++IIN      NN N 
Sbjct: 245 QNNNQPNPLLIHQSASHPHHHH---QTQPTINVSSSSSSSH--NHNIINSLHFDTNNGNT 304

Query: 263 NNSNACASPLYHNLDLKLSTTSSNAV 282
           NNSN   + L H   +K    S++ +
Sbjct: 305 NNSNNSNNHL-HTFPMKKEQQSNDHI 320

[Close]

BLAST of MS018843 vs. ExPASy TrEMBL
Match: A0A6J1C923 (protein SHOOT GRAVITROPISM 5-like OS=Momordica charantia OX=3673 GN=LOC111008569 PE=4 SV=1)

HSP 1 Score: 873.6 bits (2256), Expect = 3.5e-250
Identity = 450/452 (99.56%), Postives = 450/452 (99.56%), Query Frame = 0


Query: 1   MIANTSPSSLPSSEPFSCLENGNSNVSKRKRRPAGTPDPDAEVVSLSPKTLLESDRYVCE 60
           MIANTSPSSLPSSEPFSCLENGNSNVSKRKRRPAGTPDPDAEVVSLSPKTLLESDRYVCE
Sbjct: 1   MIANTSPSSLPSSEPFSCLENGNSNVSKRKRRPAGTPDPDAEVVSLSPKTLLESDRYVCE 60

Query: 61  ICNQGFQRDQNLQMHRRRHKVPWKLLKRETPVVRKRVFVCPEPTCLHHDPCHALGDLVGI 120
           ICNQGFQRDQNLQMHRRRHKVPWKLLKRETPVVRKRVFVCPEPTCLHHDPCHALGDLVGI
Sbjct: 61  ICNQGFQRDQNLQMHRRRHKVPWKLLKRETPVVRKRVFVCPEPTCLHHDPCHALGDLVGI 120

Query: 121 KKHFRRKHSNHKQWVCEKCSKGYAVQSDYKAHLKTCGTRGHSCDCGRVFSRVESFIEHQD 180
           KKHFRRKHSNHKQWVCEKCSKGYAVQSDYKAHLKTCGTRGHSCDCGRVFSRVESFIEHQD
Sbjct: 121 KKHFRRKHSNHKQWVCEKCSKGYAVQSDYKAHLKTCGTRGHSCDCGRVFSRVESFIEHQD 180

Query: 181 ACNMGHLRAESQSLQAAACLSRTASSPSPSSDTNFSSAPNWSAALIPPPPTLKHPPPAAP 240
           ACNMGHLRAESQSLQAAACLSRTASSPSPSSDTNFSS PNWSAALIPPPPTLKHPPPAAP
Sbjct: 181 ACNMGHLRAESQSLQAAACLSRTASSPSPSSDTNFSSGPNWSAALIPPPPTLKHPPPAAP 240

Query: 241 THDSNNSIINNNNNNNNSNACASPLYHNLDLKLSTTSSNAVDASSNRSSPSKGNNNNNKG 300
           THDSNNSII NNNNNNNSNACASPLYHNLDLKLSTTSSNAVDASSNRSSPSKGNNNNNKG
Sbjct: 241 THDSNNSIIINNNNNNNSNACASPLYHNLDLKLSTTSSNAVDASSNRSSPSKGNNNNNKG 300

Query: 301 SSTQLQLSIGSCDFSCSPGEGEDKAVAADVREEAREQLRVAMAEKEYAEEARQQAKRQIE 360
           SSTQLQLSIGSCDFSCSPGEGEDKAVAADVREEAREQLRVAMAEKEYAEEARQQAKRQIE
Sbjct: 301 SSTQLQLSIGSCDFSCSPGEGEDKAVAADVREEAREQLRVAMAEKEYAEEARQQAKRQIE 360

Query: 361 MAEQEFANAKRMRQQAAAELDKATALKQAAIKQINSTILEITCQACRKQFQATATADHHD 420
           MAEQEFANAKRMRQQAAAELDKATALKQAAIKQINSTILEITCQACRKQFQATATADHHD
Sbjct: 361 MAEQEFANAKRMRQQAAAELDKATALKQAAIKQINSTILEITCQACRKQFQATATADHHD 420

Query: 421 NSLAFSYVSSVITTEGEVDKHHSTLIPKPTNN 453
           NSLAFSYVSSVITTEGEVDKHHSTLIPKPTNN
Sbjct: 421 NSLAFSYVSSVITTEGEVDKHHSTLIPKPTNN 452

[Close]

BLAST of MS018843 vs. ExPASy TrEMBL
Match: A0A0A0LPV5 (C2H2-type domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_1G029620 PE=4 SV=1)

HSP 1 Score: 617.1 bits (1590), Expect = 5.9e-173
Identity = 360/481 (74.84%), Postives = 383/481 (79.63%), Query Frame = 0


Query: 1   MIANTSPSSLP----SSEPFSCLENGNSNVSKRKRRPAGTPDPDAEVVSLSPKTLLESDR 60
           MI NT+ S+ P    SSEP+SCLENGN+N +KRKRRPAGTPDPDAEVVSLSPKTLLESDR
Sbjct: 1   MIGNTATSASPLLPNSSEPYSCLENGNNNNNKRKRRPAGTPDPDAEVVSLSPKTLLESDR 60

Query: 61  YVCEICNQGFQRDQNLQMHRRRHKVPWKLLKRETPVVRKRVFVCPEPTCLHHDPCHALGD 120
           YVCEICNQGFQRDQNLQMHRRRHKVPWKLLKRE+PVVRKRVFVCPEPTCLHHDPCHALGD
Sbjct: 61  YVCEICNQGFQRDQNLQMHRRRHKVPWKLLKRESPVVRKRVFVCPEPTCLHHDPCHALGD 120

Query: 121 LVGIKKHFRRKHSNHKQWVCEKCSKGYAVQSDYKAHLKTCGTRGHSCDCGRVFSRVESFI 180
           LVGIKKHFRRKHSNHKQWVCEKCSKGYAVQSDYKAHLKTCGTRGHSCDCGRVFSRVESFI
Sbjct: 121 LVGIKKHFRRKHSNHKQWVCEKCSKGYAVQSDYKAHLKTCGTRGHSCDCGRVFSRVESFI 180

Query: 181 EHQDACNMGHLRAESQSLQAAACLSRTASSPSPSSDTNFSSAP----NWSAALIPPPPTL 240
           EHQDACNMGHLR ESQ     ACLSRTASSPSPSSDTNFSS P    NW  AL+ PP TL
Sbjct: 181 EHQDACNMGHLRQESQ--VQPACLSRTASSPSPSSDTNFSSTPAPSSNWH-ALVTPPLTL 240

Query: 241 KHPPPA---APTHDSNNSIINNNNNNNNSNACASPLYHNLDLKLSTTSSNAVDASSNRSS 300
           K P  A    PT DS        NNNNNS+       HNLDLKLS T+SN V+  +N   
Sbjct: 241 K-PVDAIFLTPTGDS--------NNNNNSD-------HNLDLKLS-TASNGVEGRNN--- 300

Query: 301 PSKGNNNNNKGSSTQLQLSIGSCDFSCSPGE--GEDKAVAADVREEAREQLRVAMAEKEY 360
                NNN KGSST+L+LS+GS DF     +    D   A DVREEARE+LRVAMAEK Y
Sbjct: 301 ----YNNNKKGSSTKLELSMGSFDFEDEKKKMLKLDDGGAGDVREEAREELRVAMAEKAY 360

Query: 361 AEEARQQAKRQIEMAEQEFANAKRMRQQAAAELDKATALKQAAIKQINSTILEITCQACR 420
           AEEAR+QAKRQIEMAE+EF NAKRMRQQA AELDKATALKQAAIKQINSTILEITCQAC+
Sbjct: 361 AEEARKQAKRQIEMAEEEFGNAKRMRQQAQAELDKATALKQAAIKQINSTILEITCQACQ 420

Query: 421 KQFQA--------------TATADHHDN--SLAFSYVSSVITTEGEVDKHHSTLIPKPTN 453
           KQFQA              T+ A  HDN  S+AFSYVSSVITTEGEV+K  ST+IPKP N
Sbjct: 421 KQFQAKTKTKTKTTTTTTSTSAATDHDNYSSVAFSYVSSVITTEGEVEKDQSTIIPKPPN 454

[Close]

BLAST of MS018843 vs. ExPASy TrEMBL
Match: A0A5D3BIM7 (Protein SHOOT GRAVITROPISM 5-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold248G00310 PE=4 SV=1)

HSP 1 Score: 614.8 bits (1584), Expect = 2.9e-172
Identity = 357/484 (73.76%), Postives = 381/484 (78.72%), Query Frame = 0


Query: 1   MIANTSPSSLP----SSEPFSCLENGNSNV-SKRKRRPAGTPDPDAEVVSLSPKTLLESD 60
           MI NT+ S+ P    SSEP+SCLENGN+N+ +KRKRRPAGTPDPDAEVVSLSPKTLLESD
Sbjct: 1   MIGNTATSASPLLPNSSEPYSCLENGNNNINNKRKRRPAGTPDPDAEVVSLSPKTLLESD 60

Query: 61  RYVCEICNQGFQRDQNLQMHRRRHKVPWKLLKRETPVVRKRVFVCPEPTCLHHDPCHALG 120
           RYVCEICNQGFQRDQNLQMHRRRHKVPWKLLKRE+PVVRKRVFVCPEPTCLHHDPCHALG
Sbjct: 61  RYVCEICNQGFQRDQNLQMHRRRHKVPWKLLKRESPVVRKRVFVCPEPTCLHHDPCHALG 120

Query: 121 DLVGIKKHFRRKHSNHKQWVCEKCSKGYAVQSDYKAHLKTCGTRGHSCDCGRVFSRVESF 180
           DLVGIKKHFRRKHSNHKQWVCEKCSKGYAVQSDYKAHLKTCGTRGHSCDCGRVFSRVESF
Sbjct: 121 DLVGIKKHFRRKHSNHKQWVCEKCSKGYAVQSDYKAHLKTCGTRGHSCDCGRVFSRVESF 180

Query: 181 IEHQDACNMGHLRAESQSLQAAACLSRTASSPSPSSDTNFSSAP----NWSAALIPPPPT 240
           IEHQDACNMGHLR E Q     ACLSRTASSPSPSSDTNFSS P    NW  AL+  PPT
Sbjct: 181 IEHQDACNMGHLRQEPQ--VQPACLSRTASSPSPSSDTNFSSTPAPSNNW-PALVTAPPT 240

Query: 241 LKHPPPA---APTHDSNNSIINNNNNNNNSNACASPLYHNLDLKLSTTSSNAVDASSNRS 300
           LK P  A    PT DS      NNNNNN+         HNLDLKLST S+          
Sbjct: 241 LK-PVDAIFLTPTGDS------NNNNNND---------HNLDLKLSTASNGV-------- 300

Query: 301 SPSKGNNNNNKGSSTQLQLSIGSCDFSCSPGE--GEDKAVAADVREEAREQLRVAMAEKE 360
              + NNN+NKGSST+L+LS+GS DF     +    D   A DVREEARE+LRVAMAEK 
Sbjct: 301 -KGRNNNNSNKGSSTKLELSMGSFDFEDEKKKMLKLDDGGAGDVREEAREELRVAMAEKA 360

Query: 361 YAEEARQQAKRQIEMAEQEFANAKRMRQQAAAELDKATALKQAAIKQINSTILEITCQAC 420
           YAEEAR+QAKRQIEMAE+EF NAKRMRQQA AELDKATALKQAAIKQINSTILEITCQAC
Sbjct: 361 YAEEARKQAKRQIEMAEEEFGNAKRMRQQAQAELDKATALKQAAIKQINSTILEITCQAC 420

Query: 421 RKQFQA----------------TATADHHDN--SLAFSYVSSVITTEGEVDKHHSTLIPK 453
           +KQFQA                T+ A  HDN  S+AFSYVSSVITTEGEV+K  ST+IPK
Sbjct: 421 QKQFQAKAKTKTKTTTTTTTTTTSAATDHDNYSSVAFSYVSSVITTEGEVEKDQSTIIPK 456

[Close]

BLAST of MS018843 vs. ExPASy TrEMBL
Match: A0A1S3BW52 (protein SHOOT GRAVITROPISM 5-like OS=Cucumis melo OX=3656 GN=LOC103493520 PE=4 SV=1)

HSP 1 Score: 614.8 bits (1584), Expect = 2.9e-172
Identity = 357/484 (73.76%), Postives = 381/484 (78.72%), Query Frame = 0


Query: 1   MIANTSPSSLP----SSEPFSCLENGNSNV-SKRKRRPAGTPDPDAEVVSLSPKTLLESD 60
           MI NT+ S+ P    SSEP+SCLENGN+N+ +KRKRRPAGTPDPDAEVVSLSPKTLLESD
Sbjct: 1   MIGNTATSASPLLPNSSEPYSCLENGNNNINNKRKRRPAGTPDPDAEVVSLSPKTLLESD 60

Query: 61  RYVCEICNQGFQRDQNLQMHRRRHKVPWKLLKRETPVVRKRVFVCPEPTCLHHDPCHALG 120
           RYVCEICNQGFQRDQNLQMHRRRHKVPWKLLKRE+PVVRKRVFVCPEPTCLHHDPCHALG
Sbjct: 61  RYVCEICNQGFQRDQNLQMHRRRHKVPWKLLKRESPVVRKRVFVCPEPTCLHHDPCHALG 120

Query: 121 DLVGIKKHFRRKHSNHKQWVCEKCSKGYAVQSDYKAHLKTCGTRGHSCDCGRVFSRVESF 180
           DLVGIKKHFRRKHSNHKQWVCEKCSKGYAVQSDYKAHLKTCGTRGHSCDCGRVFSRVESF
Sbjct: 121 DLVGIKKHFRRKHSNHKQWVCEKCSKGYAVQSDYKAHLKTCGTRGHSCDCGRVFSRVESF 180

Query: 181 IEHQDACNMGHLRAESQSLQAAACLSRTASSPSPSSDTNFSSAP----NWSAALIPPPPT 240
           IEHQDACNMGHLR E Q     ACLSRTASSPSPSSDTNFSS P    NW  AL+  PPT
Sbjct: 181 IEHQDACNMGHLRQEPQ--VQPACLSRTASSPSPSSDTNFSSTPAPSNNW-PALVTAPPT 240

Query: 241 LKHPPPA---APTHDSNNSIINNNNNNNNSNACASPLYHNLDLKLSTTSSNAVDASSNRS 300
           LK P  A    PT DS      NNNNNN+         HNLDLKLST S+          
Sbjct: 241 LK-PVDAIFLTPTGDS------NNNNNND---------HNLDLKLSTASNGV-------- 300

Query: 301 SPSKGNNNNNKGSSTQLQLSIGSCDFSCSPGE--GEDKAVAADVREEAREQLRVAMAEKE 360
              + NNN+NKGSST+L+LS+GS DF     +    D   A DVREEARE+LRVAMAEK 
Sbjct: 301 -KGRNNNNSNKGSSTKLELSMGSFDFEDEKKKMLKLDDGGAGDVREEAREELRVAMAEKA 360

Query: 361 YAEEARQQAKRQIEMAEQEFANAKRMRQQAAAELDKATALKQAAIKQINSTILEITCQAC 420
           YAEEAR+QAKRQIEMAE+EF NAKRMRQQA AELDKATALKQAAIKQINSTILEITCQAC
Sbjct: 361 YAEEARKQAKRQIEMAEEEFGNAKRMRQQAQAELDKATALKQAAIKQINSTILEITCQAC 420

Query: 421 RKQFQA----------------TATADHHDN--SLAFSYVSSVITTEGEVDKHHSTLIPK 453
           +KQFQA                T+ A  HDN  S+AFSYVSSVITTEGEV+K  ST+IPK
Sbjct: 421 QKQFQAKAKTKTKTTTTTTTTTTSAATDHDNYSSVAFSYVSSVITTEGEVEKDQSTIIPK 456

[Close]

BLAST of MS018843 vs. ExPASy TrEMBL
Match: A0A6J1E894 (protein indeterminate-domain 16-like isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111431719 PE=4 SV=1)

HSP 1 Score: 602.4 bits (1552), Expect = 1.5e-168
Identity = 346/469 (73.77%), Postives = 368/469 (78.46%), Query Frame = 0


Query: 1   MIANTSPS---SLPSSEPFSCLENGNSNVSKRKRRPAGTPDPDAEVVSLSPKTLLESDRY 60
           MIANT  S   SLPSSEP+SCLENG+SN +KRKRRPAGTPDPDAEVVSLSPKTLLESDRY
Sbjct: 1   MIANTPASASLSLPSSEPYSCLENGSSNSNKRKRRPAGTPDPDAEVVSLSPKTLLESDRY 60

Query: 61  VCEICNQGFQRDQNLQMHRRRHKVPWKLLKRETPVVRKRVFVCPEPTCLHHDPCHALGDL 120
           VCEICNQGFQRDQNLQMHRRRHKVPWKLLKRETPVVRKRVFVCPEP+CLHHDPCHALGDL
Sbjct: 61  VCEICNQGFQRDQNLQMHRRRHKVPWKLLKRETPVVRKRVFVCPEPSCLHHDPCHALGDL 120

Query: 121 VGIKKHFRRKHSNHKQWVCEKCSKGYAVQSDYKAHLKTCGTRGHSCDCGRVFSRVESFIE 180
           VGIKKHFRRKHSNHKQWVCEKCSK YAVQSDYKAHLKTCGTRGHSCDCGRVFSRVESFIE
Sbjct: 121 VGIKKHFRRKHSNHKQWVCEKCSKAYAVQSDYKAHLKTCGTRGHSCDCGRVFSRVESFIE 180

Query: 181 HQDACNMGHLRAESQSLQAAACLSRTASSPSPSSDTNFSSAPNWSAALIPPPPTLKHPPP 240
           HQDACNMGHLR ESQ+L   ACLSRTASSPSP SD NF++           PPT      
Sbjct: 181 HQDACNMGHLRQESQTLH-PACLSRTASSPSPPSDANFTA-----------PPTAIF--- 240

Query: 241 AAPTHDSNNSIINNNNNNNNSNACASPLYHNLDLKLSTTSSNAVDASSNRSSPSKGNNNN 300
            APT D   SIINNNNNN+         +HNLDLKLST++S                   
Sbjct: 241 LAPTDD---SIINNNNNNS---------HHNLDLKLSTSTS------------------- 300

Query: 301 NKGSSTQLQLSIGSCDFSCSPGEGEDKAVAAD-----------VREEAREQLRVAMAEKE 360
           N+GSSTQLQLSIGSCDF    G+ + +    D           VREEARE+LR AMAEK 
Sbjct: 301 NEGSSTQLQLSIGSCDF----GDKKKRVQLLDDEKGGGRGPGGVREEAREELREAMAEKA 360

Query: 361 YAEEARQQAKRQIEMAEQEFANAKRMRQQAAAELDKATALKQAAIKQINSTILEITCQAC 420
           YAEEARQQAKRQIEMAE+EF NAKRMRQQA AELDKATALKQAAIKQINST+LEITCQAC
Sbjct: 361 YAEEARQQAKRQIEMAEEEFVNAKRMRQQAQAELDKATALKQAAIKQINSTLLEITCQAC 418

Query: 421 RKQFQA--------TATADHHDNSLAFSYVSSVITTEGEVDKHHSTLIP 448
           +KQFQA        TA AD HD S+AFSYVSSVITTEGEV+K  +TLIP
Sbjct: 421 QKQFQAKPTTTTTTTAPAD-HDTSVAFSYVSSVITTEGEVEKDQATLIP 418

[Close]

BLAST of MS018843 vs. TAIR 10
Match: AT2G01940.1 (C2H2-like zinc finger protein )

HSP 1 Score: 411.8 bits (1057), Expect = 7.3e-115
Identity = 251/448 (56.03%), Postives = 312/448 (69.64%), Query Frame = 0


Query: 9   SLPSSEPF-SCLENG----NSNVSKRKRRPAGTPDPDAEVVSLSPKTLLESDRYVCEICN 68
           S  SS+PF S  ENG    N++  KRKRRPAGTPDPDAEVVSLSP+TLLESDRY+CEICN
Sbjct: 20  SSSSSDPFLSSSENGVTTTNTSTQKRKRRPAGTPDPDAEVVSLSPRTLLESDRYICEICN 79

Query: 69  QGFQRDQNLQMHRRRHKVPWKLLKRETPV-VRKRVFVCPEPTCLHHDPCHALGDLVGIKK 128
           QGFQRDQNLQMHRRRHKVPWKLLKR+  + V+KRV+VCPEPTCLHH+PCHALGDLVGIKK
Sbjct: 80  QGFQRDQNLQMHRRRHKVPWKLLKRDNNIEVKKRVYVCPEPTCLHHNPCHALGDLVGIKK 139

Query: 129 HFRRKHSNHKQWVCEKCSKGYAVQSDYKAHLKTCGTRGHSCDCGRVFSRVESFIEHQDAC 188
           HFRRKHSNHKQWVCE+CSKGYAVQSDYKAHLKTCGTRGHSCDCGRVFSRVESFIEHQD C
Sbjct: 140 HFRRKHSNHKQWVCERCSKGYAVQSDYKAHLKTCGTRGHSCDCGRVFSRVESFIEHQDNC 199

Query: 189 NMGHLRAE-----SQSLQAAACLSRTASSPS-PSSDTNFSSAPNWSAALIPPPPTLKHPP 248
           +   +  E       ++   AC SRTAS+ S PSS+TN+      + A+  P P      
Sbjct: 200 SARRVHREPPRPPQTAVTVPACSSRTASTVSTPSSETNYGG----TVAVTTPQPL----- 259

Query: 249 PAAPTHDSNNSIINNNNNNNNSNACASPLYHNLDLKLSTTSSNAVDASSNRSSPSK--GN 308
              P H   +S I  N++NN           NL+L+L   SSN      N+    K   +
Sbjct: 260 EGRPIHQRISSSILTNSSNN----------LNLELQLLPLSSNQNPNQENQQQKVKEPSH 319

Query: 309 NNNNKGSSTQLQLSIG-SCDFSCSPGEGEDKAVAADVREEAREQLRVAMAEKEYAEEARQ 368
           ++N+   +T L LSI  S  +         K + A     + + +++AM EK YAEEA++
Sbjct: 320 HHNHNHDTTNLNLSIAPSSSYQHYNNFDRIKEIMA-----SEQIMKIAMKEKAYAEEAKR 379

Query: 369 QAKRQIEMAEQEFANAKRMRQQAAAELDKATALKQAAIKQINSTILEITCQACRKQFQAT 428
           +AKRQ E+AE EFANAK++RQ+A AEL++A  LK+ ++K+I+STI+++TCQ C+ QFQA 
Sbjct: 380 EAKRQREIAENEFANAKKIRQKAQAELERAKFLKEQSMKKISSTIMQVTCQTCKGQFQAV 439

Query: 429 A--TADHHDNSLAFSYVSSVITTEGEVD 440
           A   A   + SL  SY+SS   T+GE++
Sbjct: 440 AVPAATADETSLVVSYMSSA-NTDGELE 442

[Close]

BLAST of MS018843 vs. TAIR 10
Match: AT2G01940.3 (C2H2-like zinc finger protein )

HSP 1 Score: 399.1 bits (1024), Expect = 4.9e-111
Identity = 248/449 (55.23%), Postives = 309/449 (68.82%), Query Frame = 0


Query: 9   SLPSSEPF-SCLENG----NSNVSKRKRRPAGTPDPDAEVVSLSPKTLLESDRYVCEICN 68
           S  SS+PF S  ENG    N++  KRKRRPAGTPDPDAEVVSLSP+TLLESDRY+CEICN
Sbjct: 20  SSSSSDPFLSSSENGVTTTNTSTQKRKRRPAGTPDPDAEVVSLSPRTLLESDRYICEICN 79

Query: 69  QGFQRDQNLQMHRRRHKVPWKLLKRETPV-VRKRVFVCPEPTCLHHDPCHALGDLVGIKK 128
           QGFQRDQNLQMHRRRHKVPWKLLKR+  + V+KRV+VCPEPTCLHH+PCHALGDLVGIKK
Sbjct: 80  QGFQRDQNLQMHRRRHKVPWKLLKRDNNIEVKKRVYVCPEPTCLHHNPCHALGDLVGIKK 139

Query: 129 HFRRKHSNHKQWVCEKCSKGYAVQSDYKAHLKTCGTRGHSCDCGRVFS-RVESFIEHQDA 188
           HFRRKHSNHKQWVCE+CSKGYAVQSDYKAHLKTCGTRGHSCDCG   S RVESFIEHQD 
Sbjct: 140 HFRRKHSNHKQWVCERCSKGYAVQSDYKAHLKTCGTRGHSCDCGFFSSFRVESFIEHQDN 199

Query: 189 CNMGHLRAE-----SQSLQAAACLSRTASSPS-PSSDTNFSSAPNWSAALIPPPPTLKHP 248
           C+   +  E       ++   AC SRTAS+ S PSS+TN+      + A+  P P     
Sbjct: 200 CSARRVHREPPRPPQTAVTVPACSSRTASTVSTPSSETNYGG----TVAVTTPQPL---- 259

Query: 249 PPAAPTHDSNNSIINNNNNNNNSNACASPLYHNLDLKLSTTSSNAVDASSNRSSPSK--G 308
               P H   +S I  N++NN           NL+L+L   SSN      N+    K   
Sbjct: 260 -EGRPIHQRISSSILTNSSNN----------LNLELQLLPLSSNQNPNQENQQQKVKEPS 319

Query: 309 NNNNNKGSSTQLQLSIG-SCDFSCSPGEGEDKAVAADVREEAREQLRVAMAEKEYAEEAR 368
           +++N+   +T L LSI  S  +         K + A     + + +++AM EK YAEEA+
Sbjct: 320 HHHNHNHDTTNLNLSIAPSSSYQHYNNFDRIKEIMA-----SEQIMKIAMKEKAYAEEAK 379

Query: 369 QQAKRQIEMAEQEFANAKRMRQQAAAELDKATALKQAAIKQINSTILEITCQACRKQFQA 428
           ++AKRQ E+AE EFANAK++RQ+A AEL++A  LK+ ++K+I+STI+++TCQ C+ QFQA
Sbjct: 380 REAKRQREIAENEFANAKKIRQKAQAELERAKFLKEQSMKKISSTIMQVTCQTCKGQFQA 439

Query: 429 TA--TADHHDNSLAFSYVSSVITTEGEVD 440
            A   A   + SL  SY+SS   T+GE++
Sbjct: 440 VAVPAATADETSLVVSYMSSA-NTDGELE 443

[Close]

BLAST of MS018843 vs. TAIR 10
Match: AT1G68130.1 (indeterminate(ID)-domain 14 )

HSP 1 Score: 365.5 bits (937), Expect = 6.0e-101
Identity = 225/443 (50.79%), Postives = 277/443 (62.53%), Query Frame = 0


Query: 11  PSSEPFSCLENGNSN--VSKRKRRPAGTPDPDAEVVSLSPKTLLESDRYVCEICNQGFQR 70
           PSS     L +GN      KRKRRPAGTPDP+AEVVSLSP+TLLESDRYVCEICNQGFQR
Sbjct: 22  PSSSSSDLLPDGNGTAVTQKRKRRPAGTPDPEAEVVSLSPRTLLESDRYVCEICNQGFQR 81

Query: 71  DQNLQMHRRRHKVPWKLLKRET-PVVRKRVFVCPEPTCLHHDPCHALGDLVGIKKHFRRK 130
           DQNLQMHRRRHKVPWKLLKRET   VRKRV+VCPEPTCLHH+PCHALGDLVGIKKHFRRK
Sbjct: 82  DQNLQMHRRRHKVPWKLLKRETNEEVRKRVYVCPEPTCLHHNPCHALGDLVGIKKHFRRK 141

Query: 131 HSNHKQWVCEKCSKGYAVQSDYKAHLKTCGTRGHSCDCGRVFSRVESFIEHQDACNMGHL 190
           HSNHKQW+CE+CSKGYAVQSDYKAHLKTCGTRGHSCDCGRVFSRVESFIEHQD C +   
Sbjct: 142 HSNHKQWICERCSKGYAVQSDYKAHLKTCGTRGHSCDCGRVFSRVESFIEHQDTCTVRRS 201

Query: 191 RAESQSL----QAAACLSRTASSPSPSSDTNFSSAPNWSAALIPPPPTLKHPPPAAPTHD 250
           +  +  L    Q     ++TAS+   + + + S  P     ++P  P  +   P  P+  
Sbjct: 202 QPSNHRLHEQQQHTTNATQTASTAENNENGDLSIGP-----ILPGHPLQRRQSP--PSEQ 261

Query: 251 SNNSIINNNNNNNNSNACASPLYHNLDLKLSTTSSNAVDASSNRSSPSKGNNNNNKGSST 310
             ++++              P   N  ++L    S                   N    T
Sbjct: 262 QPSTLL-------------YPFVTNGSIELQLLPS------------------RNCADET 321

Query: 311 QLQLSIGSCDFSCSPGEGEDKAVAADVREEAREQLRVAMAEKEYAEEARQQAKRQIEMAE 370
            L LSIG+           D+   ++V +++ E+   ++      EEAR++ KRQIE+AE
Sbjct: 322 SLSLSIGTM----------DQKTMSEVEKKSYEKGETSLER----EEARRETKRQIEIAE 381

Query: 371 QEFANAKRMRQQAAAELDKATALKQAAIKQINSTILEITCQACRKQFQATAT-------- 430
            EFA AKR+RQ A AEL KA   ++ A ++I++T+++ITC  C++ FQA A         
Sbjct: 382 LEFAEAKRIRQHARAELHKAHLFREEASRRISATMMQITCHNCKQHFQAPAALVPPPPQT 411

Query: 431 -ADHHDNSLAFSYVSSVITTEGE 438
                  SLA SY+SS  TTEGE
Sbjct: 442 HCTDESTSLAVSYMSSA-TTEGE 411

[Close]

BLAST of MS018843 vs. TAIR 10
Match: AT1G25250.1 (indeterminate(ID)-domain 16 )

HSP 1 Score: 359.0 bits (920), Expect = 5.6e-99
Identity = 216/407 (53.07%), Postives = 256/407 (62.90%), Query Frame = 0


Query: 38  DPDAEVVSLSPKTLLESDRYVCEICNQGFQRDQNLQMHRRRHKVPWKLLKRE--TPVVRK 97
           DPDAEVVSLSP+TLLESDRYVCEICNQGFQRDQNLQMHRRRHKVPWKLLKR+     VRK
Sbjct: 20  DPDAEVVSLSPRTLLESDRYVCEICNQGFQRDQNLQMHRRRHKVPWKLLKRDKKDEEVRK 79

Query: 98  RVFVCPEPTCLHHDPCHALGDLVGIKKHFRRKHSNHKQWVCEKCSKGYAVQSDYKAHLKT 157
           RV+VCPEPTCLHHDPCHALGDLVGIKKHFRRKHS HKQWVCE+CSKGYAVQSDYKAHLKT
Sbjct: 80  RVYVCPEPTCLHHDPCHALGDLVGIKKHFRRKHSVHKQWVCERCSKGYAVQSDYKAHLKT 139

Query: 158 CGTRGHSCDCGRVFSRVESFIEHQDACNMGHLRAESQSLQAAACLSRTASSPSPSSDTNF 217
           CG+RGHSCDCGRVFSRVESFIEHQD C                                 
Sbjct: 140 CGSRGHSCDCGRVFSRVESFIEHQDTC--------------------------------- 199

Query: 218 SSAPNWSAALIPPPPTLKHPPPAAPTHDSNNSIINNNNNNNNSNACASPLYHNLDLKLST 277
                          T++ P P    H   +++  +  +   S A   PL H L L    
Sbjct: 200 ---------------TIRQPQPTNHRHLQQHTMGLDAPSRTTSTASFGPLLHGLPLL--- 259

Query: 278 TSSNAVDASSNRSSPSKG---NNNNNKGSSTQLQLSIGSCDFSCSPGEGEDKAVAADVRE 337
                    SN+ SP+     N ++    S +LQLSIG    S      E +  +   +E
Sbjct: 260 ----RPPRPSNQHSPAFAYPFNASSAPFESLELQLSIGMARTSAQARHNEKRETSL-TKE 319

Query: 338 EAREQLRVAMAEKEYAEEARQQAKRQIEMAEQEFANAKRMRQQAAAELDKATALKQAAIK 397
            A E+ R        AEE RQ+AKRQIEMAE++F  AKR+R++A  EL+KA  +++ AIK
Sbjct: 320 RANEEAR-------KAEETRQEAKRQIEMAEKDFEKAKRIREEAKTELEKAHVVREEAIK 362

Query: 398 QINSTILEITCQACRKQFQATATADHHDNSLAFSYVSSVITTEGEVD 440
           +IN+T++EITC +C++ FQ   TAD   +SL  SYVSS  TTEGE +
Sbjct: 380 RINATMMEITCHSCKQLFQLPVTADESTSSLVMSYVSSA-TTEGECE 362

[Close]

BLAST of MS018843 vs. TAIR 10
Match: AT2G01940.2 (C2H2-like zinc finger protein )

HSP 1 Score: 312.4 bits (799), Expect = 6.0e-85
Identity = 197/378 (52.12%), Postives = 253/378 (66.93%), Query Frame = 0


Query: 74  MHRRRHKVPWKLLKRETPV-VRKRVFVCPEPTCLHHDPCHALGDLVGIKKHFRRKHSNHK 133
           MHRRRHKVPWKLLKR+  + V+KRV+VCPEPTCLHH+PCHALGDLVGIKKHFRRKHSNHK
Sbjct: 1   MHRRRHKVPWKLLKRDNNIEVKKRVYVCPEPTCLHHNPCHALGDLVGIKKHFRRKHSNHK 60

Query: 134 QWVCEKCSKGYAVQSDYKAHLKTCGTRGHSCDCGRVFSRVESFIEHQDACNMGHLRAE-- 193
           QWVCE+CSKGYAVQSDYKAHLKTCGTRGHSCDCGRVFSRVESFIEHQD C+   +  E  
Sbjct: 61  QWVCERCSKGYAVQSDYKAHLKTCGTRGHSCDCGRVFSRVESFIEHQDNCSARRVHREPP 120

Query: 194 ---SQSLQAAACLSRTASSPS-PSSDTNFSSAPNWSAALIPPPPTLKHPPPAAPTHDSNN 253
                ++   AC SRTAS+ S PSS+TN+      + A+  P P         P H   +
Sbjct: 121 RPPQTAVTVPACSSRTASTVSTPSSETNYGG----TVAVTTPQPL-----EGRPIHQRIS 180

Query: 254 SIINNNNNNNNSNACASPLYHNLDLKLSTTSSNAVDASSNRSSPSK--GNNNNNKGSSTQ 313
           S I  N++NN           NL+L+L   SSN      N+    K   +++N+   +T 
Sbjct: 181 SSILTNSSNN----------LNLELQLLPLSSNQNPNQENQQQKVKEPSHHHNHNHDTTN 240

Query: 314 LQLSIG-SCDFSCSPGEGEDKAVAADVREEAREQLRVAMAEKEYAEEARQQAKRQIEMAE 373
           L LSI  S  +         K + A     + + +++AM EK YAEEA+++AKRQ E+AE
Sbjct: 241 LNLSIAPSSSYQHYNNFDRIKEIMA-----SEQIMKIAMKEKAYAEEAKREAKRQREIAE 300

Query: 374 QEFANAKRMRQQAAAELDKATALKQAAIKQINSTILEITCQACRKQFQATA--TADHHDN 433
            EFANAK++RQ+A AEL++A  LK+ ++K+I+STI+++TCQ C+ QFQA A   A   + 
Sbjct: 301 NEFANAKKIRQKAQAELERAKFLKEQSMKKISSTIMQVTCQTCKGQFQAVAVPAATADET 353

Query: 434 SLAFSYVSSVITTEGEVD 440
           SL  SY+SS   T+GE++
Sbjct: 361 SLVVSYMSSA-NTDGELE 353

The following BLAST results are available for this feature:

BLAST of MS018843 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022136998.1	7.3e-250	99.56	protein SHOOT GRAVITROPISM 5-like [Momordica charantia]	[more]
XP_011649488.1	1.2e-172	74.84	zinc finger protein SHOOT GRAVITROPISM 5 [Cucumis sativus] >KGN63935.1 hypotheti...	[more]
XP_008452902.1	6.1e-172	73.76	PREDICTED: protein SHOOT GRAVITROPISM 5-like [Cucumis melo] >KAA0036036.1 protei...	[more]
XP_038893517.1	7.9e-172	73.96	zinc finger protein SHOOT GRAVITROPISM 5-like [Benincasa hispida]	[more]
XP_023518971.1	1.3e-169	74.20	protein indeterminate-domain 16-like isoform X1 [Cucurbita pepo subsp. pepo] >XP...	[more]

BLAST of MS018843 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
F4IPE3	1.0e-113	56.03	Zinc finger protein SHOOT GRAVITROPISM 5 OS=Arabidopsis thaliana OX=3702 GN=SGR5...	[more]
Q9C9X7	8.4e-100	50.79	Protein indeterminate-domain 14 OS=Arabidopsis thaliana OX=3702 GN=IDD14 PE=1 SV...	[more]
Q9FRH4	7.9e-98	53.07	Protein indeterminate-domain 16 OS=Arabidopsis thaliana OX=3702 GN=IDD16 PE=2 SV...	[more]
Q9ZWA6	2.1e-58	50.43	Zinc finger protein MAGPIE OS=Arabidopsis thaliana OX=3702 GN=MGP PE=1 SV=1	[more]
Q9LRW7	1.1e-54	46.62	Protein indeterminate-domain 11 OS=Arabidopsis thaliana OX=3702 GN=IDD11 PE=2 SV...	[more]

BLAST of MS018843 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1C923	3.5e-250	99.56	protein SHOOT GRAVITROPISM 5-like OS=Momordica charantia OX=3673 GN=LOC111008569...	[more]
A0A0A0LPV5	5.9e-173	74.84	C2H2-type domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_1G029620 P...	[more]
A0A5D3BIM7	2.9e-172	73.76	Protein SHOOT GRAVITROPISM 5-like OS=Cucumis melo var. makuwa OX=1194695 GN=E567...	[more]
A0A1S3BW52	2.9e-172	73.76	protein SHOOT GRAVITROPISM 5-like OS=Cucumis melo OX=3656 GN=LOC103493520 PE=4 S...	[more]
A0A6J1E894	1.5e-168	73.77	protein indeterminate-domain 16-like isoform X1 OS=Cucurbita moschata OX=3662 GN...	[more]

BLAST of MS018843 vs. TAIR 10


Match Name	E-value	Identity	Description
AT2G01940.1	7.3e-115	56.03	C2H2-like zinc finger protein	[more]
AT2G01940.3	4.9e-111	55.23	C2H2-like zinc finger protein	[more]
AT1G68130.1	6.0e-101	50.79	indeterminate(ID)-domain 14	[more]
AT1G25250.1	5.6e-99	53.07	indeterminate(ID)-domain 16	[more]
AT2G01940.2	6.0e-85	52.12	C2H2-like zinc finger protein	[more]

InterPro

Analysis Name: InterPro Annotations of Bitter gourd (TR) v1
Date Performed: 2021-10-25

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 331..393
None	No IPR available	GENE3D	3.30.160.60	Classic Zinc Finger	coord: 119..197 e-value: 5.7E-5 score: 25.2
None	No IPR available	GENE3D	3.30.160.60	Classic Zinc Finger	coord: 35..97 e-value: 4.6E-5 score: 25.1
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..24
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 277..304
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 203..261
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 223..237
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..44
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 203..221
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 240..261
None	No IPR available	PANTHER	PTHR34946:SF11	PROTEIN INDETERMINATE-DOMAIN 16-LIKE	coord: 4..439
IPR013087	Zinc finger C2H2-type	SMART	SM00355	c2h2final6	coord: 98..128 e-value: 190.0 score: 1.9 coord: 134..161 e-value: 60.0 score: 6.4 coord: 57..79 e-value: 0.0052 score: 26.0
IPR013087	Zinc finger C2H2-type	PFAM	PF00096	zf-C2H2	coord: 57..79 e-value: 0.0042 score: 17.5
IPR013087	Zinc finger C2H2-type	PROSITE	PS00028	ZINC_FINGER_C2H2_1	coord: 59..79
IPR013087	Zinc finger C2H2-type	PROSITE	PS50157	ZINC_FINGER_C2H2_2	coord: 57..79 score: 10.969637
IPR039288	Zinc finger protein SHOOT GRAVITROPISM 5-like	PANTHER	PTHR34946	OS03G0310200 PROTEIN	coord: 4..439
IPR036236	Zinc finger C2H2 superfamily	SUPERFAMILY	57667	beta-beta-alpha zinc fingers	coord: 54..80

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
MS018843.1	MS018843.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0009630	gravitropism