MS018831 (gene) Bitter gourd (TR) v1

Overview


Name	MS018831
Type	gene
Organism	Momordica charantia cv. TR (Bitter gourd (TR) v1)
Description	16.9 kDa class I heat shock protein 3
Location	scaffold14: 180303 .. 180911 (-)
RNA-Seq Expression	MS018831
Synteny	MS018831

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

TTACCAACAATGGCAAAAGATGGAGTGACGTACGAGGACTTCGAACCTTTCTGCCAATGGAAAAGACTCGATGACTCTGACGTTCTTGAGGTTCATCTCCCAGGTTTGTGCTTATAATTCCTCTGCATTCTCATAGTATTCATAGTGATTTGAAATTTATTTTTCTTGAACAATACGTTTAAAATTGTGCTGTATTGTGTACTGTCCTTACAAACAGAATTCAAGAAGGAAGAATTGAGGGTTCGGATCAGTAACAATGCTCTCCTTACAGTTTCCGGCGAGCGCCTAAAAGCCAATGATTCGAAGAAGATCAAATTCAACAGAGAATTCAAACTATCAAAGGATATATACCCAGACCAAATCCGTGCCAAATTCGGTAGCAGTGTTCTTTCGATCACGATGCCTAAGAAAGCATCAGCGGGTGTCGGCAAACCAGAAGCGGGCGTATCCAACTCCGAGGGTAAACGAACAGCAGACAGTGATAATGATAAGCCAAAGAACTTCATATCAAGTCGATTCTCGAGGTTGAAATTGAGCAAGCAGACGGCCGCGGCCATGGCGGTTGCAGCGGTGATTCTGGCATTGGGAGCTTACTATTTAACAAAAAAC

mRNA sequence

TTACCAACAATGGCAAAAGATGGAGTGACGTACGAGGACTTCGAACCTTTCTGCCAATGGAAAAGACTCGATGACTCTGACGTTCTTGAGGTTCATCTCCCAGAATTCAAGAAGGAAGAATTGAGGGTTCGGATCAGTAACAATGCTCTCCTTACAGTTTCCGGCGAGCGCCTAAAAGCCAATGATTCGAAGAAGATCAAATTCAACAGAGAATTCAAACTATCAAAGGATATATACCCAGACCAAATCCGTGCCAAATTCGGTAGCAGTGTTCTTTCGATCACGATGCCTAAGAAAGCATCAGCGGGTGTCGGCAAACCAGAAGCGGGCGTATCCAACTCCGAGGGTAAACGAACAGCAGACAGTGATAATGATAAGCCAAAGAACTTCATATCAAGTCGATTCTCGAGGTTGAAATTGAGCAAGCAGACGGCCGCGGCCATGGCGGTTGCAGCGGTGATTCTGGCATTGGGAGCTTACTATTTAACAAAAAAC

Coding sequence (CDS)

TTACCAACAATGGCAAAAGATGGAGTGACGTACGAGGACTTCGAACCTTTCTGCCAATGGAAAAGACTCGATGACTCTGACGTTCTTGAGGTTCATCTCCCAGAATTCAAGAAGGAAGAATTGAGGGTTCGGATCAGTAACAATGCTCTCCTTACAGTTTCCGGCGAGCGCCTAAAAGCCAATGATTCGAAGAAGATCAAATTCAACAGAGAATTCAAACTATCAAAGGATATATACCCAGACCAAATCCGTGCCAAATTCGGTAGCAGTGTTCTTTCGATCACGATGCCTAAGAAAGCATCAGCGGGTGTCGGCAAACCAGAAGCGGGCGTATCCAACTCCGAGGGTAAACGAACAGCAGACAGTGATAATGATAAGCCAAAGAACTTCATATCAAGTCGATTCTCGAGGTTGAAATTGAGCAAGCAGACGGCCGCGGCCATGGCGGTTGCAGCGGTGATTCTGGCATTGGGAGCTTACTATTTAACAAAAAAC

Protein sequence

LPTMAKDGVTYEDFEPFCQWKRLDDSDVLEVHLPEFKKEELRVRISNNALLTVSGERLKANDSKKIKFNREFKLSKDIYPDQIRAKFGSSVLSITMPKKASAGVGKPEAGVSNSEGKRTADSDNDKPKNFISSRFSRLKLSKQTAAAMAVAAVILALGAYYLTKN

Homology

[Close]

BLAST of MS018831 vs. NCBI nr
Match: XP_022137119.1 (16.9 kDa class I heat shock protein 3 [Momordica charantia])

HSP 1 Score: 308.5 bits (789), Expect = 3.4e-80
Identity = 161/162 (99.38%), Postives = 161/162 (99.38%), Query Frame = 0


Query: 4   MAKDGVTYEDFEPFCQWKRLDDSDVLEVHLPEFKKEELRVRISNNALLTVSGERLKANDS 63
           MAKDGVTYEDFEPFCQWKRLDDSDVLEVHLPEFKKEELRVRISNNALLTVSGERLKAND 
Sbjct: 1   MAKDGVTYEDFEPFCQWKRLDDSDVLEVHLPEFKKEELRVRISNNALLTVSGERLKANDP 60

Query: 64  KKIKFNREFKLSKDIYPDQIRAKFGSSVLSITMPKKASAGVGKPEAGVSNSEGKRTADSD 123
           KKIKFNREFKLSKDIYPDQIRAKFGSSVLSITMPKKASAGVGKPEAGVSNSEGKRTADSD
Sbjct: 61  KKIKFNREFKLSKDIYPDQIRAKFGSSVLSITMPKKASAGVGKPEAGVSNSEGKRTADSD 120

Query: 124 NDKPKNFISSRFSRLKLSKQTAAAMAVAAVILALGAYYLTKN 166
           NDKPKNFISSRFSRLKLSKQTAAAMAVAAVILALGAYYLTKN
Sbjct: 121 NDKPKNFISSRFSRLKLSKQTAAAMAVAAVILALGAYYLTKN 162

[Close]

BLAST of MS018831 vs. NCBI nr
Match: XP_023001660.1 (17.8 kDa class I heat shock protein-like [Cucurbita maxima])

HSP 1 Score: 203.0 bits (515), Expect = 2.0e-48
Identity = 112/163 (68.71%), Postives = 131/163 (80.37%), Query Frame = 0


Query: 9   VTYEDFEPFCQWKRLDDSD--VLEVHLPEFKKEELRVRISNNALLTVSGERLKANDSKKI 68
           V+YE+FEPFC+WK+LDDSD  VLEVHLPEFKKEELRVRI NN++L +SGE L AND KK+
Sbjct: 9   VSYEEFEPFCKWKKLDDSDVHVLEVHLPEFKKEELRVRIKNNSILAISGEHLTANDGKKM 68

Query: 69  KFNREFKLSKDIYPDQIRAKFGSSVLSITMPKK-ASAGVGKPEAGVSNSEGKRTADSDND 128
           +FNRE KL KDIYPDQIRAKFG SVLSITMPKK +SA +GKP+A  + SEG  TA +D+ 
Sbjct: 69  QFNREIKLPKDIYPDQIRAKFGGSVLSITMPKKPSSAEIGKPKADAA-SEGNDTAPNDDG 128

Query: 129 KPKNFIS---SRFSRLKLSKQTAAAMAVAAVILALGAYYLTKN 166
           +PKN IS   S  SRLK SK+ A A+A A +ILA GAYYL KN
Sbjct: 129 EPKNLISRLTSPLSRLKFSKKKATALAAAVLILAFGAYYLVKN 170

[Close]

BLAST of MS018831 vs. NCBI nr
Match: XP_008465577.1 (PREDICTED: 16.9 kDa class I heat shock protein 1 [Cucumis melo] >KAA0036046.1 16.9 kDa class I heat shock protein 1 [Cucumis melo var. makuwa] >TYJ98853.1 16.9 kDa class I heat shock protein 1 [Cucumis melo var. makuwa])

HSP 1 Score: 203.0 bits (515), Expect = 2.0e-48
Identity = 112/162 (69.14%), Postives = 127/162 (78.40%), Query Frame = 0


Query: 8   GVTYEDFEPFCQWKRLDDSDVLEVHLPEFKKEELRVRISNNALLTVSGERLKANDSKKIK 67
           GV YE+FEPFC+WK+L+DSDVLEVHLPEFKKEELRVRI NN++LT+SGE L A D KK+ 
Sbjct: 8   GVLYEEFEPFCKWKKLEDSDVLEVHLPEFKKEELRVRIKNNSILTLSGEHLTAKDGKKMH 67

Query: 68  FNREFKLSKDIYPDQIRAKFGSSVLSITMPKKAS-AGVGKPEAGVSNSEGKRTADSDNDK 127
           FNRE KL KDIYPD+IRAKFG +VLSITMPKKAS   + KP    + SE K T  + N K
Sbjct: 68  FNREIKLPKDIYPDEIRAKFGGNVLSITMPKKASPPEISKPNPD-NASEDKLTQSNGNGK 127

Query: 128 PKNFIS---SRFSRLKLSKQTAAAMAVAAVILALGAYYLTKN 166
           PKNFIS   S  SRLK SK+TA AMAVA VILA+G YYL KN
Sbjct: 128 PKNFISRLKSPLSRLKFSKETATAMAVAVVILAVGVYYLIKN 168

[Close]

BLAST of MS018831 vs. NCBI nr
Match: XP_023520341.1 (17.8 kDa class I heat shock protein-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 201.4 bits (511), Expect = 5.9e-48
Identity = 114/163 (69.94%), Postives = 131/163 (80.37%), Query Frame = 0


Query: 9   VTYEDFEPFCQWKRLDDSD--VLEVHLPEFKKEELRVRISNNALLTVSGERLKANDSKKI 68
           V+YE+FEPFC+WK+LDDSD  VLEVHLPEFKKEELRVRI NN++L +SGE L AND KK+
Sbjct: 9   VSYEEFEPFCKWKKLDDSDVHVLEVHLPEFKKEELRVRIKNNSILAISGEHL-ANDGKKM 68

Query: 69  KFNREFKLSKDIYPDQIRAKFGSSVLSITMPKK-ASAGVGKPEAGVSNSEGKRTADSDND 128
           +FNRE KL KDIYPDQIRAKFG SVLSITMPKK +SA +GKP+A  + SEG  TA +D+ 
Sbjct: 69  QFNREIKLPKDIYPDQIRAKFGGSVLSITMPKKPSSAEIGKPKADAA-SEGNDTAPNDDG 128

Query: 129 KPKNFIS---SRFSRLKLSKQTAAAMAVAAVILALGAYYLTKN 166
           KPKN IS   S  SRLK SK+ A A+A A VILA GAYYL KN
Sbjct: 129 KPKNLISRLTSPLSRLKFSKKKATALAAAVVILAFGAYYLIKN 169

[Close]

BLAST of MS018831 vs. NCBI nr
Match: XP_022923784.1 (17.8 kDa class I heat shock protein-like [Cucurbita moschata] >KAG6584432.1 17.8 kDa class I heat shock protein, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 197.2 bits (500), Expect = 1.1e-46
Identity = 113/163 (69.33%), Postives = 129/163 (79.14%), Query Frame = 0


Query: 9   VTYEDFEPFCQWKRLDDSD--VLEVHLPEFKKEELRVRISNNALLTVSGERLKANDSKKI 68
           V+YE+FEPFC+WK+LDDSD  VLEVHLPEFKKEELRVRI NN++L +SGE L AND KK+
Sbjct: 9   VSYEEFEPFCKWKKLDDSDVHVLEVHLPEFKKEELRVRIKNNSILAISGEHL-ANDGKKM 68

Query: 69  KFNREFKLSKDIYPDQIRAKFGSSVLSITMPKK-ASAGVGKPEAGVSNSEGKRTADSDND 128
           +FNRE KL KDIYPDQIRAKFG SVLSITMPKK +SA   KP+A  + SEG  TA +D+ 
Sbjct: 69  QFNREIKLPKDIYPDQIRAKFGGSVLSITMPKKPSSAESSKPKADAA-SEGNDTAPNDDG 128

Query: 129 KPKNFIS---SRFSRLKLSKQTAAAMAVAAVILALGAYYLTKN 166
           KPKN IS   S  SRLK SK+ A A+A A VILA GAYYL KN
Sbjct: 129 KPKNLISRLTSPLSRLKFSKKKATALAAAVVILAFGAYYLIKN 169

[Close]

BLAST of MS018831 vs. ExPASy Swiss-Prot
Match: D9UBX6 (Inactive protein RESTRICTED TEV MOVEMENT 2 OS=Arabidopsis thaliana OX=3702 GN=RTM2 PE=3 SV=1)

HSP 1 Score: 64.7 bits (156), Expect = 1.1e-09
Identity = 35/93 (37.63%), Postives = 58/93 (62.37%), Query Frame = 0


Query: 8   GVTYEDFEPFCQWKRLDDSDVLEVHLPEFKKEELRVR-ISNNALLTVSGERLKANDSKKI 67
           GV YEDF P  +WK   ++ +L + L  F KE+++V  + ++ ++ V+GER  AN  K  
Sbjct: 13  GVQYEDFVPKSEWKDQPEATILNIDLTGFAKEQMKVTYVHSSKMIRVTGERPLAN-RKWS 72

Query: 68  KFNREFKLSKDIYPDQIRAKFGSSVLSITMPKK 100
           +FN  F + ++   D+I   F ++VL+ITMPK+
Sbjct: 73  RFNEVFTVPQNCLVDKIHGSFKNNVLTITMPKE 104

[Close]

BLAST of MS018831 vs. ExPASy Swiss-Prot
Match: D9UBX4 (Inactive protein RESTRICTED TEV MOVEMENT 2 OS=Arabidopsis thaliana OX=3702 GN=RTM2 PE=3 SV=1)

HSP 1 Score: 64.7 bits (156), Expect = 1.1e-09
Identity = 35/93 (37.63%), Postives = 58/93 (62.37%), Query Frame = 0


Query: 8   GVTYEDFEPFCQWKRLDDSDVLEVHLPEFKKEELRVR-ISNNALLTVSGERLKANDSKKI 67
           GV YEDF P  +WK   ++ +L + L  F KE+++V  + ++ ++ V+GER  AN  K  
Sbjct: 13  GVQYEDFVPKSEWKDQPEATILNIDLTGFAKEQMKVTYVHSSKMIRVTGERPLAN-RKWS 72

Query: 68  KFNREFKLSKDIYPDQIRAKFGSSVLSITMPKK 100
           +FN  F + ++   D+I   F ++VL+ITMPK+
Sbjct: 73  RFNEVFTVPQNCLVDKIHGSFKNNVLTITMPKE 104

[Close]

BLAST of MS018831 vs. ExPASy Swiss-Prot
Match: Q9M670 (Protein RESTRICTED TEV MOVEMENT 2 OS=Arabidopsis thaliana OX=3702 GN=RTM2 PE=1 SV=1)

HSP 1 Score: 64.7 bits (156), Expect = 1.1e-09
Identity = 35/93 (37.63%), Postives = 58/93 (62.37%), Query Frame = 0


Query: 8   GVTYEDFEPFCQWKRLDDSDVLEVHLPEFKKEELRVR-ISNNALLTVSGERLKANDSKKI 67
           GV YEDF P  +WK   ++ +L + L  F KE+++V  + ++ ++ V+GER  AN  K  
Sbjct: 13  GVQYEDFVPKSEWKDQPEATILNIDLTGFAKEQMKVTYVHSSKMIRVTGERPLAN-RKWS 72

Query: 68  KFNREFKLSKDIYPDQIRAKFGSSVLSITMPKK 100
           +FN  F + ++   D+I   F ++VL+ITMPK+
Sbjct: 73  RFNEVFTVPQNCLVDKIHGSFKNNVLTITMPKE 104

[Close]

BLAST of MS018831 vs. ExPASy Swiss-Prot
Match: D5K211 (Inactive protein RESTRICTED TEV MOVEMENT 2 OS=Arabidopsis thaliana OX=3702 GN=RTM2 PE=3 SV=1)

HSP 1 Score: 64.3 bits (155), Expect = 1.5e-09
Identity = 35/93 (37.63%), Postives = 58/93 (62.37%), Query Frame = 0


Query: 8   GVTYEDFEPFCQWKRLDDSDVLEVHLPEFKKEELRVR-ISNNALLTVSGERLKANDSKKI 67
           GV YEDF P  +WK   ++ +L + L  F KE+++V  + ++ ++ V+GER  AN  K  
Sbjct: 13  GVQYEDFVPKSEWKDQPEATILNIDLTGFAKEQMKVTYVHSSKMIRVTGERPLAN-RKWN 72

Query: 68  KFNREFKLSKDIYPDQIRAKFGSSVLSITMPKK 100
           +FN  F + ++   D+I   F ++VL+ITMPK+
Sbjct: 73  RFNEVFTVPQNCLVDKIHGSFKNNVLTITMPKE 104

[Close]

BLAST of MS018831 vs. ExPASy Swiss-Prot
Match: D9UC01 (Inactive protein RESTRICTED TEV MOVEMENT 2 OS=Arabidopsis thaliana OX=3702 GN=RTM2 PE=3 SV=1)

HSP 1 Score: 63.9 bits (154), Expect = 1.9e-09
Identity = 35/93 (37.63%), Postives = 57/93 (61.29%), Query Frame = 0


Query: 8   GVTYEDFEPFCQWKRLDDSDVLEVHLPEFKKEELRVR-ISNNALLTVSGERLKANDSKKI 67
           GV YEDF P  +WK   ++ +L + L  F KE+++V  + ++ ++ V+GER  AN  K  
Sbjct: 13  GVQYEDFVPKSEWKDQPEATILNIDLTGFAKEQMKVTYVHSSKMIRVTGERPLAN-RKWN 72

Query: 68  KFNREFKLSKDIYPDQIRAKFGSSVLSITMPKK 100
           +FN  F + ++   D+I   F  +VL+ITMPK+
Sbjct: 73  RFNEVFTVPQNCLVDKIHGSFKKNVLTITMPKE 104

[Close]

BLAST of MS018831 vs. ExPASy TrEMBL
Match: A0A6J1C6B8 (16.9 kDa class I heat shock protein 3 OS=Momordica charantia OX=3673 GN=LOC111008672 PE=3 SV=1)

HSP 1 Score: 308.5 bits (789), Expect = 1.6e-80
Identity = 161/162 (99.38%), Postives = 161/162 (99.38%), Query Frame = 0


Query: 4   MAKDGVTYEDFEPFCQWKRLDDSDVLEVHLPEFKKEELRVRISNNALLTVSGERLKANDS 63
           MAKDGVTYEDFEPFCQWKRLDDSDVLEVHLPEFKKEELRVRISNNALLTVSGERLKAND 
Sbjct: 1   MAKDGVTYEDFEPFCQWKRLDDSDVLEVHLPEFKKEELRVRISNNALLTVSGERLKANDP 60

Query: 64  KKIKFNREFKLSKDIYPDQIRAKFGSSVLSITMPKKASAGVGKPEAGVSNSEGKRTADSD 123
           KKIKFNREFKLSKDIYPDQIRAKFGSSVLSITMPKKASAGVGKPEAGVSNSEGKRTADSD
Sbjct: 61  KKIKFNREFKLSKDIYPDQIRAKFGSSVLSITMPKKASAGVGKPEAGVSNSEGKRTADSD 120

Query: 124 NDKPKNFISSRFSRLKLSKQTAAAMAVAAVILALGAYYLTKN 166
           NDKPKNFISSRFSRLKLSKQTAAAMAVAAVILALGAYYLTKN
Sbjct: 121 NDKPKNFISSRFSRLKLSKQTAAAMAVAAVILALGAYYLTKN 162

[Close]

BLAST of MS018831 vs. ExPASy TrEMBL
Match: A0A5D3BHU7 (16.9 kDa class I heat shock protein 1 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold248G00480 PE=3 SV=1)

HSP 1 Score: 203.0 bits (515), Expect = 9.8e-49
Identity = 112/162 (69.14%), Postives = 127/162 (78.40%), Query Frame = 0


Query: 8   GVTYEDFEPFCQWKRLDDSDVLEVHLPEFKKEELRVRISNNALLTVSGERLKANDSKKIK 67
           GV YE+FEPFC+WK+L+DSDVLEVHLPEFKKEELRVRI NN++LT+SGE L A D KK+ 
Sbjct: 8   GVLYEEFEPFCKWKKLEDSDVLEVHLPEFKKEELRVRIKNNSILTLSGEHLTAKDGKKMH 67

Query: 68  FNREFKLSKDIYPDQIRAKFGSSVLSITMPKKAS-AGVGKPEAGVSNSEGKRTADSDNDK 127
           FNRE KL KDIYPD+IRAKFG +VLSITMPKKAS   + KP    + SE K T  + N K
Sbjct: 68  FNREIKLPKDIYPDEIRAKFGGNVLSITMPKKASPPEISKPNPD-NASEDKLTQSNGNGK 127

Query: 128 PKNFIS---SRFSRLKLSKQTAAAMAVAAVILALGAYYLTKN 166
           PKNFIS   S  SRLK SK+TA AMAVA VILA+G YYL KN
Sbjct: 128 PKNFISRLKSPLSRLKFSKETATAMAVAVVILAVGVYYLIKN 168

[Close]

BLAST of MS018831 vs. ExPASy TrEMBL
Match: A0A6J1KLT1 (17.8 kDa class I heat shock protein-like OS=Cucurbita maxima OX=3661 GN=LOC111495735 PE=3 SV=1)

HSP 1 Score: 203.0 bits (515), Expect = 9.8e-49
Identity = 112/163 (68.71%), Postives = 131/163 (80.37%), Query Frame = 0


Query: 9   VTYEDFEPFCQWKRLDDSD--VLEVHLPEFKKEELRVRISNNALLTVSGERLKANDSKKI 68
           V+YE+FEPFC+WK+LDDSD  VLEVHLPEFKKEELRVRI NN++L +SGE L AND KK+
Sbjct: 9   VSYEEFEPFCKWKKLDDSDVHVLEVHLPEFKKEELRVRIKNNSILAISGEHLTANDGKKM 68

Query: 69  KFNREFKLSKDIYPDQIRAKFGSSVLSITMPKK-ASAGVGKPEAGVSNSEGKRTADSDND 128
           +FNRE KL KDIYPDQIRAKFG SVLSITMPKK +SA +GKP+A  + SEG  TA +D+ 
Sbjct: 69  QFNREIKLPKDIYPDQIRAKFGGSVLSITMPKKPSSAEIGKPKADAA-SEGNDTAPNDDG 128

Query: 129 KPKNFIS---SRFSRLKLSKQTAAAMAVAAVILALGAYYLTKN 166
           +PKN IS   S  SRLK SK+ A A+A A +ILA GAYYL KN
Sbjct: 129 EPKNLISRLTSPLSRLKFSKKKATALAAAVLILAFGAYYLVKN 170

[Close]

BLAST of MS018831 vs. ExPASy TrEMBL
Match: A0A1S3CP71 (16.9 kDa class I heat shock protein 1 OS=Cucumis melo OX=3656 GN=LOC103502934 PE=3 SV=1)

HSP 1 Score: 203.0 bits (515), Expect = 9.8e-49
Identity = 112/162 (69.14%), Postives = 127/162 (78.40%), Query Frame = 0


Query: 8   GVTYEDFEPFCQWKRLDDSDVLEVHLPEFKKEELRVRISNNALLTVSGERLKANDSKKIK 67
           GV YE+FEPFC+WK+L+DSDVLEVHLPEFKKEELRVRI NN++LT+SGE L A D KK+ 
Sbjct: 8   GVLYEEFEPFCKWKKLEDSDVLEVHLPEFKKEELRVRIKNNSILTLSGEHLTAKDGKKMH 67

Query: 68  FNREFKLSKDIYPDQIRAKFGSSVLSITMPKKAS-AGVGKPEAGVSNSEGKRTADSDNDK 127
           FNRE KL KDIYPD+IRAKFG +VLSITMPKKAS   + KP    + SE K T  + N K
Sbjct: 68  FNREIKLPKDIYPDEIRAKFGGNVLSITMPKKASPPEISKPNPD-NASEDKLTQSNGNGK 127

Query: 128 PKNFIS---SRFSRLKLSKQTAAAMAVAAVILALGAYYLTKN 166
           PKNFIS   S  SRLK SK+TA AMAVA VILA+G YYL KN
Sbjct: 128 PKNFISRLKSPLSRLKFSKETATAMAVAVVILAVGVYYLIKN 168

[Close]

BLAST of MS018831 vs. ExPASy TrEMBL
Match: A0A6J1E7D1 (17.8 kDa class I heat shock protein-like OS=Cucurbita moschata OX=3662 GN=LOC111431393 PE=3 SV=1)

HSP 1 Score: 197.2 bits (500), Expect = 5.4e-47
Identity = 113/163 (69.33%), Postives = 129/163 (79.14%), Query Frame = 0


Query: 9   VTYEDFEPFCQWKRLDDSD--VLEVHLPEFKKEELRVRISNNALLTVSGERLKANDSKKI 68
           V+YE+FEPFC+WK+LDDSD  VLEVHLPEFKKEELRVRI NN++L +SGE L AND KK+
Sbjct: 9   VSYEEFEPFCKWKKLDDSDVHVLEVHLPEFKKEELRVRIKNNSILAISGEHL-ANDGKKM 68

Query: 69  KFNREFKLSKDIYPDQIRAKFGSSVLSITMPKK-ASAGVGKPEAGVSNSEGKRTADSDND 128
           +FNRE KL KDIYPDQIRAKFG SVLSITMPKK +SA   KP+A  + SEG  TA +D+ 
Sbjct: 69  QFNREIKLPKDIYPDQIRAKFGGSVLSITMPKKPSSAESSKPKADAA-SEGNDTAPNDDG 128

Query: 129 KPKNFIS---SRFSRLKLSKQTAAAMAVAAVILALGAYYLTKN 166
           KPKN IS   S  SRLK SK+ A A+A A VILA GAYYL KN
Sbjct: 129 KPKNLISRLTSPLSRLKFSKKKATALAAAVVILAFGAYYLIKN 169

[Close]

BLAST of MS018831 vs. TAIR 10
Match: AT1G54400.1 (HSP20-like chaperones superfamily protein )

HSP 1 Score: 85.1 bits (209), Expect = 5.7e-17
Identity = 57/164 (34.76%), Postives = 89/164 (54.27%), Query Frame = 0


Query: 11  YEDFEPFCQWKRLDDSDVLEVHLPE-FKKEELRVRISNNALLTVSGERLKANDSKKIKFN 70
           Y++ EPFC+W+R +D D+LE+HLP   KKE L+++I+N+ +LT++G     + +K I+F 
Sbjct: 13  YDEIEPFCRWRRTEDIDILELHLPSGLKKEHLKIQINNSGVLTITG-GCPVDQTKTIRFM 72

Query: 71  REFKLSKDIYPDQIRAKFGSSVLSITMPK--KASAGVGKPEAGVSNSEGKRTADSDNDKP 130
           +E K++KD   ++IRAKF   VL +TMPK    +AG+     G +        D      
Sbjct: 73  KETKVAKDCKRNEIRAKFSKGVLYVTMPKTIPIAAGLSVSLKGATPQHQTPKTDEGMRNV 132

Query: 131 KNFISSRFSRLKLSKQ----------TAAAMAVAAVILALGAYY 162
            N  S  +S+    KQ           AA + VAA +L +   Y
Sbjct: 133 ANCSSEFYSKFGSLKQRLWRKTVVEGVAAVVVVAAAVLGVVKAY 175

[Close]

BLAST of MS018831 vs. TAIR 10
Match: AT5G04890.1 (HSP20-like chaperones superfamily protein )

HSP 1 Score: 64.7 bits (156), Expect = 8.0e-11
Identity = 35/93 (37.63%), Postives = 58/93 (62.37%), Query Frame = 0


Query: 8   GVTYEDFEPFCQWKRLDDSDVLEVHLPEFKKEELRVR-ISNNALLTVSGERLKANDSKKI 67
           GV YEDF P  +WK   ++ +L + L  F KE+++V  + ++ ++ V+GER  AN  K  
Sbjct: 13  GVQYEDFVPKSEWKDQPEATILNIDLTGFAKEQMKVTYVHSSKMIRVTGERPLAN-RKWS 72

Query: 68  KFNREFKLSKDIYPDQIRAKFGSSVLSITMPKK 100
           +FN  F + ++   D+I   F ++VL+ITMPK+
Sbjct: 73  RFNEVFTVPQNCLVDKIHGSFKNNVLTITMPKE 104

[Close]

BLAST of MS018831 vs. TAIR 10
Match: AT2G27140.1 (HSP20-like chaperones superfamily protein )

HSP 1 Score: 63.9 bits (154), Expect = 1.4e-10
Identity = 32/93 (34.41%), Postives = 54/93 (58.06%), Query Frame = 0


Query: 11  YEDFEPFCQWKRLDDSDVLEVHLPEFKKEELRVRISNNALLTVSGERLKANDSKKIKFNR 70
           Y++FEP   WK     + L ++LP F+KE+L+V+++    L V G+R  A  +K I+F +
Sbjct: 14  YDEFEPLSNWKTEQGFEALTIYLPGFRKEQLKVQVTTTRKLRVMGDR-PAGANKWIRFRK 73

Query: 71  EFKLSKDIYPDQIRAKFGSSVLSITMPKKASAG 104
           EF +  +I  D + AKF  + L + +P+    G
Sbjct: 74  EFPIPPNIDVDSVSAKFEGANLVVRLPRTEPMG 105

[Close]

BLAST of MS018831 vs. TAIR 10
Match: AT1G07400.1 (HSP20-like chaperones superfamily protein )

HSP 1 Score: 59.3 bits (142), Expect = 3.4e-09
Identity = 31/93 (33.33%), Postives = 55/93 (59.14%), Query Frame = 0


Query: 20  WKRLDDSDVLEVHLPEFKKEELRVRISNNALLTVSGERLKANDSKKI----------KFN 79
           WK   ++ V +  LP  KKEE++V I ++++L +SGER    + K+           +F+
Sbjct: 52  WKETAEAHVFKADLPGMKKEEVKVEIEDDSVLKISGERHVEKEEKQDTWHRVERSSGQFS 111

Query: 80  REFKLSKDIYPDQIRAKFGSSVLSITMPKKASA 103
           R+FKL +++  DQ++A   + VL++T+PK   A
Sbjct: 112 RKFKLPENVKMDQVKASMENGVLTVTVPKVEEA 144

[Close]

BLAST of MS018831 vs. TAIR 10
Match: AT5G20970.1 (HSP20-like chaperones superfamily protein )

HSP 1 Score: 57.8 bits (138), Expect = 9.8e-09
Identity = 34/97 (35.05%), Postives = 54/97 (55.67%), Query Frame = 0


Query: 4  MAKDGV--TYEDFEPFCQWKRLDDSDVLEVHLPEFKKEELRVRISNNALLTVSGERLKAN 63
          MA  G+   Y++FEP  +W    D++VL   LP FKKE+L+V ++    L ++GER    
Sbjct: 1  MANFGIERVYQEFEPATRWTSEPDAEVLVADLPGFKKEQLKVSVTATRKLRLTGER-PTG 60

Query: 64 DSKKIKFNREFKLSKDIYPDQIRAKFGSSVLSITMPK 99
           +K I+F++E  +   +  D + A F  + L I  PK
Sbjct: 61 GNKWIRFHQEIPVPLTVDIDSVSAMFKDNKLYIRHPK 96

The following BLAST results are available for this feature:

BLAST of MS018831 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022137119.1	3.4e-80	99.38	16.9 kDa class I heat shock protein 3 [Momordica charantia]	[more]
XP_023001660.1	2.0e-48	68.71	17.8 kDa class I heat shock protein-like [Cucurbita maxima]	[more]
XP_008465577.1	2.0e-48	69.14	PREDICTED: 16.9 kDa class I heat shock protein 1 [Cucumis melo] >KAA0036046.1 16...	[more]
XP_023520341.1	5.9e-48	69.94	17.8 kDa class I heat shock protein-like [Cucurbita pepo subsp. pepo]	[more]
XP_022923784.1	1.1e-46	69.33	17.8 kDa class I heat shock protein-like [Cucurbita moschata] >KAG6584432.1 17.8...	[more]

BLAST of MS018831 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
D9UBX6	1.1e-09	37.63	Inactive protein RESTRICTED TEV MOVEMENT 2 OS=Arabidopsis thaliana OX=3702 GN=RT...	[more]
D9UBX4	1.1e-09	37.63	Inactive protein RESTRICTED TEV MOVEMENT 2 OS=Arabidopsis thaliana OX=3702 GN=RT...	[more]
Q9M670	1.1e-09	37.63	Protein RESTRICTED TEV MOVEMENT 2 OS=Arabidopsis thaliana OX=3702 GN=RTM2 PE=1 S...	[more]
D5K211	1.5e-09	37.63	Inactive protein RESTRICTED TEV MOVEMENT 2 OS=Arabidopsis thaliana OX=3702 GN=RT...	[more]
D9UC01	1.9e-09	37.63	Inactive protein RESTRICTED TEV MOVEMENT 2 OS=Arabidopsis thaliana OX=3702 GN=RT...	[more]

BLAST of MS018831 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1C6B8	1.6e-80	99.38	16.9 kDa class I heat shock protein 3 OS=Momordica charantia OX=3673 GN=LOC11100...	[more]
A0A5D3BHU7	9.8e-49	69.14	16.9 kDa class I heat shock protein 1 OS=Cucumis melo var. makuwa OX=1194695 GN=...	[more]
A0A6J1KLT1	9.8e-49	68.71	17.8 kDa class I heat shock protein-like OS=Cucurbita maxima OX=3661 GN=LOC11149...	[more]
A0A1S3CP71	9.8e-49	69.14	16.9 kDa class I heat shock protein 1 OS=Cucumis melo OX=3656 GN=LOC103502934 PE...	[more]
A0A6J1E7D1	5.4e-47	69.33	17.8 kDa class I heat shock protein-like OS=Cucurbita moschata OX=3662 GN=LOC111...	[more]

BLAST of MS018831 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G54400.1	5.7e-17	34.76	HSP20-like chaperones superfamily protein	[more]
AT5G04890.1	8.0e-11	37.63	HSP20-like chaperones superfamily protein	[more]
AT2G27140.1	1.4e-10	34.41	HSP20-like chaperones superfamily protein	[more]
AT1G07400.1	3.4e-09	33.33	HSP20-like chaperones superfamily protein	[more]
AT5G20970.1	9.8e-09	35.05	HSP20-like chaperones superfamily protein	[more]

InterPro

Analysis Name: InterPro Annotations of Bitter gourd (TR) v1
Date Performed: 2021-10-25

Position :

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IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR008978	HSP20-like chaperone	GENE3D	2.60.40.790		coord: 3..102 e-value: 2.9E-18 score: 67.7
IPR008978	HSP20-like chaperone	SUPERFAMILY	49764	HSP20-like chaperones	coord: 10..102
IPR002068	Alpha crystallin/Hsp20 domain	PFAM	PF00011	HSP20	coord: 21..102 e-value: 1.5E-10 score: 41.1
IPR002068	Alpha crystallin/Hsp20 domain	PROSITE	PS01031	SHSP	coord: 8..114 score: 17.563742
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 98..128
None	No IPR available	PANTHER	PTHR43670:SF10	HSP20-LIKE CHAPERONES SUPERFAMILY PROTEIN	coord: 9..162
None	No IPR available	CDD	cd06464	ACD_sHsps-like	coord: 24..98 e-value: 1.69536E-17 score: 71.046
IPR045045	Small heat shock protein RTM2-like	PANTHER	PTHR43670	HEAT SHOCK PROTEIN 26	coord: 9..162

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
MS018831.1	MS018831.1	mRNA