
MS018816 (gene) Bitter gourd (TR) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.GTGAAATCGGTGAACACTAAATCTACGGCGGTGCTTTATCACTATCCCTGTCCCGATGGTGCTTTCGCCGCTCTTGCCGCTCATCTCTACTTCTCGGCCGCTTCTCTTCCCGCTTTTTTCTTCCCCAATACCGTCTACAATCCTCTCAGGTCTGCATTTTCCTTCAGTCTCGTTGCTTAAACTGCGTTGAAACTCCATATTTCACCATTCTAATGTTTTCTTTTTCCTTTCAGAACGGAGCAGCTTCCCCTGCATCAAATTGATGACGTTTACCTTTTGGATTTTGTGGGACCTTCTGGATTCGTTCAGGAACTATCCTCAAAAGTTACCAGGTGTTTCCCATATTTCATGCTTCATATCATTCTTTATTTGAGATGCACGTGTAATAACTTTCCTTCCAATAAACTTATTTTTATTGCTTAATTTTACAATTTGGGATGGAAAAAGTAGATGAAAAGCATTGGAACAATTTGAGCTTGTTCCAGTTCCATGATGGTCTCTCTCTCTTGTTGTTTTTGTGGTTGCTTAGAAAATGTCTCTCTCTAATGATCTCTTCCGTTTTTTTTTCCTCTGTGTCATTAGAGTGATAATACTGGACCACCACAAGACGGCTCTTGAAAAGCTTGGCGATGAATCTTCATCCGGTCAAAATGTGACTAAAGTCATAGATATTCAGAGAAGTGGAGCTACGATAGCTTTTGACTATTTCAAGCAAAAGCTAATACAAGTTGCTCACGGGAAATTCGATGTTGGTTCTTGCCATCACAAAGTGCTAAATGAATTTGAGCGCATGAGGACACTTTATGAATACATCGAGGATGGGGATCTTTGGAGGTGGAGTCTCCCAAATAGTAAAGCTGTAAGCAGTGGGTTGAAAGATCTGAATCTTGAATATGATACCCTCTTGAATCCTCGCTTGTTTGATCAGGTAATTTCCCCTTTTGCACTCTGAAAGTTCTGAAAAATATAATTTCATCCAATTAGCTAGGCAGTGCAGTAAGATATAGAAGAATCTTGATGGATTCTAGATAACATAGATAGTAATTATGAAGCTTGATGTAGCGAGATTAATTTGCAAGGCACTGATTTACAGGAATGTGGGGCTTTTCAAGCTCATGAGAAAGTTTAATTACAATTTTCTTATCAGCTCTTTGTTTTCTTAGTCTTCAATGAACACCCTCATGAAAATGAATGCAAAAGATGTTTGTCAAACGGAAGATTAGAGTGGAGTTTCTTATGCTACTTGTTCTAAGAAGTTTAGCTGCATATCTTGCATCTTTCATCCATTGAGGTTTTATTTCAACTATAGAGCACATTACATCCTTCTCTTGTAGAATGTCTCCATTCTCTTGGATGACTATAATAGGTCAATAACACTAGAGATGATTACGGAGTGTATGTTCTTGCAGTTACTATCTCTGGATATGGAGACTATGATTGGTCAAGGAATGGCGAGTTTATCACACAAGCAAAAATTAATAGATGATGCTCTTAATCAATCATATAGCATTACACTCGGTGGTGGAGCTTTTGGATGTTGTCTGGTGGGTCCACTGATCACTTTTTCTATCTTTATCCATCTTTCTAACTGAGTTGAATTTTGAAATTAGATGTTATTATCATGTTGTGTGAATTATTAATTCAAAATAAACAGTTTGTCATGTTGGCTTGGCTTGATTATATTTTTTAAAATGGTGGTTCTGAATTCAATAGGTTGAGATCTTCTTTTCCAAATGAATAATCATCAAATCACAGTCTACGTTGCTTGGTGCCCATTATATATGTTAAGAGAGTAAGCTGAAAATTGGGAAATAACTATGAAATAGGAAAAAATGAATAAACATTTACATTCTCTGATTTTGTTCCCCACCCAATAGGCTGTTGATGCAGATTCTATTTCGGAACTAAGGAGTGAATTAGGACACCAATTGGCTACTAAGAGTCAAAATTTAAATTTAAGGTACGACAACTTTTCTACTCATATGATCTGAGGCACACTTTTATTGTCGTATCCAGAAAATATTCGTTGCTTCTTATTAGTATCTGTTTCCTGATCGTTTTCAGAATTTATGAGAGTGTTCTATAATGAAAATGTCATCTGATAGTCCTATGGATGTTGCTTTCTGAAATGCCTTGTGCCCTTTTCTTCTTCATTAGCTCTGGCTGTGTTCTTTGTTTATTTTGTTGTGTGAAGGCTTCTAGACTTGCTCTTAAAATTTGTCATGCCCTAAATAACCGTTCATTATCTCTATTGGCCATGGCTTCTGCACTCTCCCCTGTCCCTGTAAAGTTGTTCATCATAGAGATTGACAGTTAGTTTATAGTCGTAACTTCCAGACTAGGACAACTGACTTTAGTAAAGAAATGAAGGTATAGTCACTCGCCTCTGTTATCCACCTTTAAATAAATAGGGAGATTTGAACGAACAGCATATTAACCCATCTTCATTTCTGTCTCAAAATTCTTCATATTCCTTGTTTTTCATTTTCTTCATTTTCTCCCCAGAGTAAATGTCACTTTTTGCAGTTTTTTTCATTCATGTTCTTTAATCTTGTAGAGGCATTGGGGCCATCGTATACCGAGTCCCTGCTCTTGGGAACAATCAAATGTTGAAAATAAGTCTTAGAAGTGTGCACGACGAAGACACAACTCCCATATCACAGGTTGAGCTCCTCCTATTTATCTTCAGAGAGGACAGTAATAGTTTTTTCTAGATCTCAACCCTTCAATTTTTCCTTTCATTTGTCAGGAATTTGGAGGTGGGGGCCATAGAAATGCAAGCTCCTTCATGTTAAGCTCAACGGATTTCAAGAAGTGGAAGATT GTGAAATCGGTGAACACTAAATCTACGGCGGTGCTTTATCACTATCCCTGTCCCGATGGTGCTTTCGCCGCTCTTGCCGCTCATCTCTACTTCTCGGCCGCTTCTCTTCCCGCTTTTTTCTTCCCCAATACCGTCTACAATCCTCTCAGAGTGATAATACTGGACCACCACAAGACGGCTCTTGAAAAGCTTGGCGATGAATCTTCATCCGGTCAAAATGTGACTAAAGTCATAGATATTCAGAGAAGTGGAGCTACGATAGCTTTTGACTATTTCAAGCAAAAGCTAATACAAGTTGCTCACGGGAAATTCGATGTTGGTTCTTGCCATCACAAAGTGCTAAATGAATTTGAGCGCATGAGGACACTTTATGAATACATCGAGGATGGGGATCTTTGGAGGTGGAGTCTCCCAAATAGTAAAGCTGTAAGCAGTGGGTTGAAAGATCTGAATCTTGAATATGATACCCTCTTGAATCCTCGCTTGTTTGATCAGAATGTCTCCATTCTCTTGGATGACTATAATAGGTCAATAACACTAGAGATGATTACGGAGTGTATGTTCTTGCAGTTACTATCTCTGGATATGGAGACTATGATTGGTCAAGGAATGGCGAGTTTATCACACAAGCAAAAATTAATAGATGATGCTCTTAATCAATCATATAGCATTACACTCGGTGGTGGAGCTTTTGGATGTTGTCTGGCTGTTGATGCAGATTCTATTTCGGAACTAAGGAGTGAATTAGGACACCAATTGGCTACTAAGAGTCAAAATTTAAATTTAAGAGGCATTGGGGCCATCGTATACCGAGTCCCTGCTCTTGGGAACAATCAAATGTTGAAAATAAGTCTTAGAAGTGTGCACGACGAAGACACAACTCCCATATCACAGGAATTTGGAGGTGGGGGCCATAGAAATGCAAGCTCCTTCATGTTAAGCTCAACGGATTTCAAGAAGTGGAAGATT GTGAAATCGGTGAACACTAAATCTACGGCGGTGCTTTATCACTATCCCTGTCCCGATGGTGCTTTCGCCGCTCTTGCCGCTCATCTCTACTTCTCGGCCGCTTCTCTTCCCGCTTTTTTCTTCCCCAATACCGTCTACAATCCTCTCAGAGTGATAATACTGGACCACCACAAGACGGCTCTTGAAAAGCTTGGCGATGAATCTTCATCCGGTCAAAATGTGACTAAAGTCATAGATATTCAGAGAAGTGGAGCTACGATAGCTTTTGACTATTTCAAGCAAAAGCTAATACAAGTTGCTCACGGGAAATTCGATGTTGGTTCTTGCCATCACAAAGTGCTAAATGAATTTGAGCGCATGAGGACACTTTATGAATACATCGAGGATGGGGATCTTTGGAGGTGGAGTCTCCCAAATAGTAAAGCTGTAAGCAGTGGGTTGAAAGATCTGAATCTTGAATATGATACCCTCTTGAATCCTCGCTTGTTTGATCAGAATGTCTCCATTCTCTTGGATGACTATAATAGGTCAATAACACTAGAGATGATTACGGAGTGTATGTTCTTGCAGTTACTATCTCTGGATATGGAGACTATGATTGGTCAAGGAATGGCGAGTTTATCACACAAGCAAAAATTAATAGATGATGCTCTTAATCAATCATATAGCATTACACTCGGTGGTGGAGCTTTTGGATGTTGTCTGGCTGTTGATGCAGATTCTATTTCGGAACTAAGGAGTGAATTAGGACACCAATTGGCTACTAAGAGTCAAAATTTAAATTTAAGAGGCATTGGGGCCATCGTATACCGAGTCCCTGCTCTTGGGAACAATCAAATGTTGAAAATAAGTCTTAGAAGTGTGCACGACGAAGACACAACTCCCATATCACAGGAATTTGGAGGTGGGGGCCATAGAAATGCAAGCTCCTTCATGTTAAGCTCAACGGATTTCAAGAAGTGGAAGATT VKSVNTKSTAVLYHYPCPDGAFAALAAHLYFSAASLPAFFFPNTVYNPLRVIILDHHKTALEKLGDESSSGQNVTKVIDIQRSGATIAFDYFKQKLIQVAHGKFDVGSCHHKVLNEFERMRTLYEYIEDGDLWRWSLPNSKAVSSGLKDLNLEYDTLLNPRLFDQNVSILLDDYNRSITLEMITECMFLQLLSLDMETMIGQGMASLSHKQKLIDDALNQSYSITLGGGAFGCCLAVDADSISELRSELGHQLATKSQNLNLRGIGAIVYRVPALGNNQMLKISLRSVHDEDTTPISQEFGGGGHRNASSFMLSSTDFKKWKI Homology
BLAST of MS018816 vs. NCBI nr
Match: XP_022137680.1 (uncharacterized protein LOC111009057 isoform X1 [Momordica charantia]) HSP 1 Score: 563.5 bits (1451), Expect = 1.1e-156 Identity = 296/356 (83.15%), Postives = 296/356 (83.15%), Query Frame = 0
BLAST of MS018816 vs. NCBI nr
Match: XP_022923823.1 (uncharacterized protein LOC111431421 isoform X1 [Cucurbita moschata]) HSP 1 Score: 515.0 bits (1325), Expect = 4.7e-142 Identity = 269/356 (75.56%), Postives = 290/356 (81.46%), Query Frame = 0
BLAST of MS018816 vs. NCBI nr
Match: XP_023519513.1 (uncharacterized protein LOC111782904 [Cucurbita pepo subsp. pepo]) HSP 1 Score: 503.8 bits (1296), Expect = 1.1e-138 Identity = 264/356 (74.16%), Postives = 281/356 (78.93%), Query Frame = 0
BLAST of MS018816 vs. NCBI nr
Match: XP_023001121.1 (uncharacterized protein LOC111495359 isoform X1 [Cucurbita maxima]) HSP 1 Score: 502.3 bits (1292), Expect = 3.1e-138 Identity = 264/356 (74.16%), Postives = 280/356 (78.65%), Query Frame = 0
BLAST of MS018816 vs. NCBI nr
Match: XP_022923824.1 (uncharacterized protein LOC111431421 isoform X2 [Cucurbita moschata] >KAG6584443.1 putative protein R106, partial [Cucurbita argyrosperma subsp. sororia] >KAG7020032.1 hypothetical protein SDJN02_19000 [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 500.4 bits (1287), Expect = 1.2e-137 Identity = 263/356 (73.88%), Postives = 281/356 (78.93%), Query Frame = 0
BLAST of MS018816 vs. ExPASy TrEMBL
Match: A0A6J1C7B4 (uncharacterized protein LOC111009057 isoform X1 OS=Momordica charantia OX=3673 GN=LOC111009057 PE=4 SV=1) HSP 1 Score: 563.5 bits (1451), Expect = 5.6e-157 Identity = 296/356 (83.15%), Postives = 296/356 (83.15%), Query Frame = 0
BLAST of MS018816 vs. ExPASy TrEMBL
Match: A0A6J1EAN6 (uncharacterized protein LOC111431421 isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111431421 PE=4 SV=1) HSP 1 Score: 515.0 bits (1325), Expect = 2.3e-142 Identity = 269/356 (75.56%), Postives = 290/356 (81.46%), Query Frame = 0
BLAST of MS018816 vs. ExPASy TrEMBL
Match: A0A6J1KHR0 (uncharacterized protein LOC111495359 isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC111495359 PE=4 SV=1) HSP 1 Score: 502.3 bits (1292), Expect = 1.5e-138 Identity = 264/356 (74.16%), Postives = 280/356 (78.65%), Query Frame = 0
BLAST of MS018816 vs. ExPASy TrEMBL
Match: A0A6J1E7G5 (uncharacterized protein LOC111431421 isoform X2 OS=Cucurbita moschata OX=3662 GN=LOC111431421 PE=4 SV=1) HSP 1 Score: 500.4 bits (1287), Expect = 5.8e-138 Identity = 263/356 (73.88%), Postives = 281/356 (78.93%), Query Frame = 0
BLAST of MS018816 vs. ExPASy TrEMBL
Match: A0A0A0LT85 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G032420 PE=4 SV=1) HSP 1 Score: 467.2 bits (1201), Expect = 5.4e-128 Identity = 252/362 (69.61%), Postives = 269/362 (74.31%), Query Frame = 0
BLAST of MS018816 vs. TAIR 10
Match: AT1G53345.1 (unknown protein; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: 8 plant structures; EXPRESSED DURING: 4 anthesis, F mature embryo stage, petal differentiation and expansion stage, E expanded cotyledon stage, D bilateral stage; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G09580.1); Has 201 Blast hits to 201 proteins in 75 species: Archae - 6; Bacteria - 102; Metazoa - 2; Fungi - 0; Plants - 47; Viruses - 7; Other Eukaryotes - 37 (source: NCBI BLink). ) HSP 1 Score: 354.0 bits (907), Expect = 1.3e-97 Identity = 189/355 (53.24%), Postives = 236/355 (66.48%), Query Frame = 0
BLAST of MS018816 vs. TAIR 10
Match: AT5G09580.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G53345.1); Has 53 Blast hits to 53 proteins in 12 species: Archae - 0; Bacteria - 2; Metazoa - 0; Fungi - 0; Plants - 50; Viruses - 0; Other Eukaryotes - 1 (source: NCBI BLink). ) HSP 1 Score: 128.6 bits (322), Expect = 8.8e-30 Identity = 100/348 (28.74%), Postives = 157/348 (45.11%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Bitter gourd (TR) v1
Date Performed: 2021-10-25 Position : 0 Zoom : x 1
Relationships
The following mRNA feature(s) are a part of this gene:
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