MS018730 (gene) Bitter gourd (TR) v1

Overview


Name	MS018730
Type	gene
Organism	Momordica charantia cv. TR (Bitter gourd (TR) v1)
Description	Two-component response regulator
Location	scaffold313: 1464685 .. 1465415 (-)
RNA-Seq Expression	MS018730
Synteny	MS018730

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGGCGTCGCTCTCGAGTCCTCGCAGTTCCATGTTCTTGCTGTTGATGATAGCTTCATCGACAGGAAATTGATCGAGCGCCTCCTCCAGACCTCCTCCTATCACGGTATTTCACTTTTTCAATTTTGTTTCCCCGTTTTTTCTTCTCCTCCTCCGACCTAGGGCTAATCGGTTTTCTATTTTCTCTTTCGATTAGTTACTGCTGTTGATTCCGGTAGCAAGGCCTTGGAATTTCTCGGTCTTCTTCAAGAACATGATGATGAAACAGACTCCAAAATCCACTTGAATCATCATCAAGTATGAATCCCTAACTCTCTCTGTTTCTCTCTGTTTTCCTTTTTTTTTTTCTTTTTGTTTCTTCTCTAACTTGCTTCTTCTTCTCTCTCGTTTCTCAGGAAGTGGAAGTAAATCTGATCATTACAGATTACAGTATGCCTGGAATGAGTGGCTACGATCTCCTCCGGAGGATCAAGGTTTGCGACTTTGCCCTAATTTCCTCTTTCAATCCAATCCGATCCACTGAGAATGCATGACTAATCGATTCGATGAATTTGCAGGAATCAAAATCGCTTAAAGACATACCAGTTGTGATAATGTCTTCGGAGAACGTCCCGTCGAGAATAAACAGATGCTTGGAAGAAGGAGCGGAAGAGTTCTTCCTCAAACCAGTTCAATTGTCAGATGTGAGGAAGCTGAGACCTCATTTGGTCAAAGAAAGATCCGCAAGAACT

mRNA sequence

ATGGGCGTCGCTCTCGAGTCCTCGCAGTTCCATGTTCTTGCTGTTGATGATAGCTTCATCGACAGGAAATTGATCGAGCGCCTCCTCCAGACCTCCTCCTATCACGTTACTGCTGTTGATTCCGGTAGCAAGGCCTTGGAATTTCTCGGTCTTCTTCAAGAACATGATGATGAAACAGACTCCAAAATCCACTTGAATCATCATCAAGAAGTGGAAGTAAATCTGATCATTACAGATTACAGTATGCCTGGAATGAGTGGCTACGATCTCCTCCGGAGGATCAAGGAATCAAAATCGCTTAAAGACATACCAGTTGTGATAATGTCTTCGGAGAACGTCCCGTCGAGAATAAACAGATGCTTGGAAGAAGGAGCGGAAGAGTTCTTCCTCAAACCAGTTCAATTGTCAGATGTGAGGAAGCTGAGACCTCATTTGGTCAAAGAAAGATCCGCAAGAACT

Coding sequence (CDS)

ATGGGCGTCGCTCTCGAGTCCTCGCAGTTCCATGTTCTTGCTGTTGATGATAGCTTCATCGACAGGAAATTGATCGAGCGCCTCCTCCAGACCTCCTCCTATCACGTTACTGCTGTTGATTCCGGTAGCAAGGCCTTGGAATTTCTCGGTCTTCTTCAAGAACATGATGATGAAACAGACTCCAAAATCCACTTGAATCATCATCAAGAAGTGGAAGTAAATCTGATCATTACAGATTACAGTATGCCTGGAATGAGTGGCTACGATCTCCTCCGGAGGATCAAGGAATCAAAATCGCTTAAAGACATACCAGTTGTGATAATGTCTTCGGAGAACGTCCCGTCGAGAATAAACAGATGCTTGGAAGAAGGAGCGGAAGAGTTCTTCCTCAAACCAGTTCAATTGTCAGATGTGAGGAAGCTGAGACCTCATTTGGTCAAAGAAAGATCCGCAAGAACT

Protein sequence

MGVALESSQFHVLAVDDSFIDRKLIERLLQTSSYHVTAVDSGSKALEFLGLLQEHDDETDSKIHLNHHQEVEVNLIITDYSMPGMSGYDLLRRIKESKSLKDIPVVIMSSENVPSRINRCLEEGAEEFFLKPVQLSDVRKLRPHLVKERSART

Homology

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BLAST of MS018730 vs. NCBI nr
Match: XP_022146422.1 (two-component response regulator ORR4-like [Momordica charantia])

HSP 1 Score: 298.9 bits (764), Expect = 2.5e-77
Identity = 152/153 (99.35%), Postives = 152/153 (99.35%), Query Frame = 0


Query: 1   MGVALESSQFHVLAVDDSFIDRKLIERLLQTSSYHVTAVDSGSKALEFLGLLQEHDDETD 60
           MGVALESSQFHVLAVDDSFIDRKLIERLLQTSSYHVTAVDSGSKALEFLGLLQEHDDETD
Sbjct: 1   MGVALESSQFHVLAVDDSFIDRKLIERLLQTSSYHVTAVDSGSKALEFLGLLQEHDDETD 60

Query: 61  SKIHLNHHQEVEVNLIITDYSMPGMSGYDLLRRIKESKSLKDIPVVIMSSENVPSRINRC 120
           SKIH NHHQEVEVNLIITDYSMPGMSGYDLLRRIKESKSLKDIPVVIMSSENVPSRINRC
Sbjct: 61  SKIHSNHHQEVEVNLIITDYSMPGMSGYDLLRRIKESKSLKDIPVVIMSSENVPSRINRC 120

Query: 121 LEEGAEEFFLKPVQLSDVRKLRPHLVKERSART 154
           LEEGAEEFFLKPVQLSDVRKLRPHLVKERSART
Sbjct: 121 LEEGAEEFFLKPVQLSDVRKLRPHLVKERSART 153

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BLAST of MS018730 vs. NCBI nr
Match: XP_023550008.1 (two-component response regulator ORR4-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 263.5 bits (672), Expect = 1.2e-66
Identity = 135/155 (87.10%), Postives = 147/155 (94.84%), Query Frame = 0


Query: 1   MGVALESSQFHVLAVDDSFIDRKLIERLLQTSSYHVTAVDSGSKALEFLGLLQEH--DDE 60
           MGVA+ES++FHVLAVDDSFIDRKLIERLL+TSSYHVT VDSG+KALEFLGL+ +H  DDE
Sbjct: 1   MGVAVESTRFHVLAVDDSFIDRKLIERLLKTSSYHVTVVDSGNKALEFLGLVGDHDDDDE 60

Query: 61  TDSKI-HLNHHQEVEVNLIITDYSMPGMSGYDLLRRIKESKSLKDIPVVIMSSENVPSRI 120
           TDS+I   NHHQEV+VNLIITDYSMPGMSGYDLLR+IKESKSLKDIPVVIMSSENVPSRI
Sbjct: 61  TDSEIAPSNHHQEVDVNLIITDYSMPGMSGYDLLRKIKESKSLKDIPVVIMSSENVPSRI 120

Query: 121 NRCLEEGAEEFFLKPVQLSDVRKLRPHLVKERSAR 153
           NRCLEEGAEEFFLKPVQLSDVRKLRPHL+KE+S R
Sbjct: 121 NRCLEEGAEEFFLKPVQLSDVRKLRPHLIKEKSTR 155

[Close]

BLAST of MS018730 vs. NCBI nr
Match: XP_008465907.1 (PREDICTED: two-component response regulator ORR10-like [Cucumis melo] >KAA0050208.1 two-component response regulator ORR10-like [Cucumis melo var. makuwa] >TYJ98202.1 two-component response regulator ORR10-like [Cucumis melo var. makuwa])

HSP 1 Score: 262.7 bits (670), Expect = 2.0e-66
Identity = 133/152 (87.50%), Postives = 145/152 (95.39%), Query Frame = 0


Query: 1   MGVALESSQFHVLAVDDSFIDRKLIERLLQTSSYHVTAVDSGSKALEFLGLLQEHDDETD 60
           M VALES+ FHVLAVDDSFIDRKLIERLL+TSSYHVTAVDSG+KALEFLGL+Q+HD +TD
Sbjct: 1   MVVALESTPFHVLAVDDSFIDRKLIERLLKTSSYHVTAVDSGTKALEFLGLVQDHDQQTD 60

Query: 61  SKI--HLNHHQEVEVNLIITDYSMPGMSGYDLLRRIKESKSLKDIPVVIMSSENVPSRIN 120
           SKI    +HHQEV+VNLIITDYSMPGMSGY+LLR+IKESKSLKDIPVVIMSSENVPSRIN
Sbjct: 61  SKIAPENHHHQEVDVNLIITDYSMPGMSGYELLRKIKESKSLKDIPVVIMSSENVPSRIN 120

Query: 121 RCLEEGAEEFFLKPVQLSDVRKLRPHLVKERS 151
           RCLEEGAEEFFLKPVQLSDVRKLRPHL+KE+S
Sbjct: 121 RCLEEGAEEFFLKPVQLSDVRKLRPHLIKEKS 152

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BLAST of MS018730 vs. NCBI nr
Match: KAG6579124.1 (Two-component response regulator ARR9, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 261.2 bits (666), Expect = 5.8e-66
Identity = 134/156 (85.90%), Postives = 146/156 (93.59%), Query Frame = 0


Query: 1   MGVALESSQFHVLAVDDSFIDRKLIERLLQTSSYHVTAVDSGSKALEFLGLLQEH---DD 60
           MGVA+ES++FHVLAVDDSFIDRKLIERLL+TSSYHVT VDSG+KALEFLGL+ +H   DD
Sbjct: 1   MGVAVESTRFHVLAVDDSFIDRKLIERLLETSSYHVTVVDSGNKALEFLGLVGDHDDDDD 60

Query: 61  ETDSKI-HLNHHQEVEVNLIITDYSMPGMSGYDLLRRIKESKSLKDIPVVIMSSENVPSR 120
           E DS+I   NHHQEV+VNLIITDYSMPGMSGYDLLR+IKESKSLKDIPVVIMSSENVPSR
Sbjct: 61  EPDSQIAPSNHHQEVDVNLIITDYSMPGMSGYDLLRKIKESKSLKDIPVVIMSSENVPSR 120

Query: 121 INRCLEEGAEEFFLKPVQLSDVRKLRPHLVKERSAR 153
           INRCLEEGAEEFFLKPVQLSDVRKLRPHL+KE+S R
Sbjct: 121 INRCLEEGAEEFFLKPVQLSDVRKLRPHLIKEKSTR 156

[Close]

BLAST of MS018730 vs. NCBI nr
Match: KAG7016647.1 (Two-component response regulator ARR9 [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 261.2 bits (666), Expect = 5.8e-66
Identity = 134/157 (85.35%), Postives = 147/157 (93.63%), Query Frame = 0


Query: 1   MGVALESSQFHVLAVDDSFIDRKLIERLLQTSSYHVTAVDSGSKALEFLGLLQEH----D 60
           MGVA+ES++FHVLAVDDSFIDRKLIERLL+TSSYHVT VDSG+KALEFLGL+ +H    D
Sbjct: 1   MGVAVESTRFHVLAVDDSFIDRKLIERLLETSSYHVTVVDSGNKALEFLGLVGDHDDDDD 60

Query: 61  DETDSKI-HLNHHQEVEVNLIITDYSMPGMSGYDLLRRIKESKSLKDIPVVIMSSENVPS 120
           DE DS+I   NHHQEV+VNLIITDYSMPGMSGYDLLR+IKESKSLKDIPVVIMSSENVPS
Sbjct: 61  DEPDSQIAPSNHHQEVDVNLIITDYSMPGMSGYDLLRKIKESKSLKDIPVVIMSSENVPS 120

Query: 121 RINRCLEEGAEEFFLKPVQLSDVRKLRPHLVKERSAR 153
           RINRCLEEGAEEFFLKPVQLSDVRKLRPHL+KE+S+R
Sbjct: 121 RINRCLEEGAEEFFLKPVQLSDVRKLRPHLIKEKSSR 157

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BLAST of MS018730 vs. ExPASy Swiss-Prot
Match: Q4GZK7 (Two-component response regulator ORR4 OS=Oryza sativa subsp. indica OX=39946 GN=RR4 PE=2 SV=1)

HSP 1 Score: 205.3 bits (521), Expect = 4.9e-52
Identity = 105/150 (70.00%), Postives = 123/150 (82.00%), Query Frame = 0


Query: 1   MGVALESSQFHVLAVDDSFIDRKLIERLLQTSSYHVTAVDSGSKALEFLGLLQEHDDETD 60
           M V    S+FHVLAVDDS IDRKLIE LL+ SSY VT VDSGSKALE LGL  E DD + 
Sbjct: 1   MTVVDAESRFHVLAVDDSLIDRKLIEMLLKNSSYQVTTVDSGSKALELLGLRDEGDDSSS 60

Query: 61  SKIHLN-HHQEVEVNLIITDYSMPGMSGYDLLRRIKESKSLKDIPVVIMSSENVPSRINR 120
           S    +  HQE++VNLIITDY MPGM+GYDLL+R+K S SLKDIPVVIMSSENVP+RINR
Sbjct: 61  SPSSSSPDHQEIDVNLIITDYCMPGMTGYDLLKRVKGSSSLKDIPVVIMSSENVPARINR 120

Query: 121 CLEEGAEEFFLKPVQLSDVRKLRPHLVKER 150
           CLE+GAEEFFLKPV+L+D++KL+ HL+K +
Sbjct: 121 CLEDGAEEFFLKPVKLADMKKLKSHLLKRK 150

[Close]

BLAST of MS018730 vs. ExPASy Swiss-Prot
Match: Q942A1 (Two-component response regulator ORR4 OS=Oryza sativa subsp. japonica OX=39947 GN=RR4 PE=2 SV=1)

HSP 1 Score: 205.3 bits (521), Expect = 4.9e-52
Identity = 105/150 (70.00%), Postives = 123/150 (82.00%), Query Frame = 0


Query: 1   MGVALESSQFHVLAVDDSFIDRKLIERLLQTSSYHVTAVDSGSKALEFLGLLQEHDDETD 60
           M V    S+FHVLAVDDS IDRKLIE LL+ SSY VT VDSGSKALE LGL  E DD + 
Sbjct: 1   MTVVDAESRFHVLAVDDSLIDRKLIEMLLKNSSYQVTTVDSGSKALELLGLRDEGDDSSS 60

Query: 61  SKIHLN-HHQEVEVNLIITDYSMPGMSGYDLLRRIKESKSLKDIPVVIMSSENVPSRINR 120
           S    +  HQE++VNLIITDY MPGM+GYDLL+R+K S SLKDIPVVIMSSENVP+RINR
Sbjct: 61  SPSSSSPDHQEIDVNLIITDYCMPGMTGYDLLKRVKGSSSLKDIPVVIMSSENVPARINR 120

Query: 121 CLEEGAEEFFLKPVQLSDVRKLRPHLVKER 150
           CLE+GAEEFFLKPV+L+D++KL+ HL+K +
Sbjct: 121 CLEDGAEEFFLKPVKLADMKKLKSHLLKRK 150

[Close]

BLAST of MS018730 vs. ExPASy Swiss-Prot
Match: O80366 (Two-component response regulator ARR9 OS=Arabidopsis thaliana OX=3702 GN=ARR9 PE=1 SV=1)

HSP 1 Score: 204.5 bits (519), Expect = 8.4e-52
Identity = 108/152 (71.05%), Postives = 126/152 (82.89%), Query Frame = 0


Query: 1   MGVALESSQFHVLAVDDSFIDRKLIERLLQTSSYHVTAVDSGSKALEFLGLLQ---EHDD 60
           MG+A E SQFHVLAVDDS  DRKLIERLLQ SS  VT VDSGSKALEFLGL Q    +D 
Sbjct: 1   MGMAAE-SQFHVLAVDDSLFDRKLIERLLQKSSCQVTTVDSGSKALEFLGLRQSTDSNDP 60

Query: 61  ETDSKIHLNHHQEVEVNLIITDYSMPGMSGYDLLRRIKESKSLKDIPVVIMSSENVPSRI 120
              SK  +N HQ VEVNLIITDY MPGM+GYDLL+++KES + +DIPVVIMSSENVP+RI
Sbjct: 61  NAFSKAPVN-HQVVEVNLIITDYCMPGMTGYDLLKKVKESSAFRDIPVVIMSSENVPARI 120

Query: 121 NRCLEEGAEEFFLKPVQLSDVRKLRPHLVKER 150
           +RCLEEGAEEFFLKPV+L+D+ KL+PH++K +
Sbjct: 121 SRCLEEGAEEFFLKPVRLADLNKLKPHMMKTK 150

[Close]

BLAST of MS018730 vs. ExPASy Swiss-Prot
Match: Q4GZK2 (Two-component response regulator ORR9 OS=Oryza sativa subsp. indica OX=39946 GN=RR9 PE=2 SV=1)

HSP 1 Score: 203.0 bits (515), Expect = 2.4e-51
Identity = 106/149 (71.14%), Postives = 123/149 (82.55%), Query Frame = 0


Query: 1   MGVALESSQFHVLAVDDSFIDRKLIERLLQTSSYHVTAVDSGSKALEFLGLLQEHDDETD 60
           M VA+E + FHVLAVDDS  DRKLIERLL+TSS+ VT VDSGSKALEFLGL   HD E  
Sbjct: 1   MAVAIE-APFHVLAVDDSLPDRKLIERLLKTSSFQVTTVDSGSKALEFLGL---HDHEDS 60

Query: 61  SKIHLNHHQEVEVNLIITDYSMPGMSGYDLLRRIKESKSLKDIPVVIMSSENVPSRINRC 120
                +  QEV VNLIITDY MPGM+GYDLL++IKES  L+DIPVVIMSS+N+PSRINRC
Sbjct: 61  PISTQSDQQEVAVNLIITDYCMPGMTGYDLLKKIKESSYLRDIPVVIMSSDNIPSRINRC 120

Query: 121 LEEGAEEFFLKPVQLSDVRKLRPHLVKER 150
           LEEGA+EFFLKPV+LSD+ KL+PH++K R
Sbjct: 121 LEEGADEFFLKPVRLSDMSKLKPHILKSR 145

[Close]

BLAST of MS018730 vs. ExPASy Swiss-Prot
Match: Q2RAP3 (Two-component response regulator ORR9 OS=Oryza sativa subsp. japonica OX=39947 GN=RR9 PE=2 SV=2)

HSP 1 Score: 203.0 bits (515), Expect = 2.4e-51
Identity = 106/149 (71.14%), Postives = 123/149 (82.55%), Query Frame = 0


Query: 1   MGVALESSQFHVLAVDDSFIDRKLIERLLQTSSYHVTAVDSGSKALEFLGLLQEHDDETD 60
           M VA+E + FHVLAVDDS  DRKLIERLL+TSS+ VT VDSGSKALEFLGL   HD E  
Sbjct: 1   MAVAIE-APFHVLAVDDSLPDRKLIERLLKTSSFQVTTVDSGSKALEFLGL---HDHEDS 60

Query: 61  SKIHLNHHQEVEVNLIITDYSMPGMSGYDLLRRIKESKSLKDIPVVIMSSENVPSRINRC 120
                +  QEV VNLIITDY MPGM+GYDLL++IKES  L+DIPVVIMSS+N+PSRINRC
Sbjct: 61  PISTQSDQQEVAVNLIITDYCMPGMTGYDLLKKIKESSYLRDIPVVIMSSDNIPSRINRC 120

Query: 121 LEEGAEEFFLKPVQLSDVRKLRPHLVKER 150
           LEEGA+EFFLKPV+LSD+ KL+PH++K R
Sbjct: 121 LEEGADEFFLKPVRLSDMSKLKPHILKSR 145

[Close]

BLAST of MS018730 vs. ExPASy TrEMBL
Match: A0A6J1CZJ3 (two-component response regulator ORR4-like OS=Momordica charantia OX=3673 GN=LOC111015642 PE=4 SV=1)

HSP 1 Score: 298.9 bits (764), Expect = 1.2e-77
Identity = 152/153 (99.35%), Postives = 152/153 (99.35%), Query Frame = 0


Query: 1   MGVALESSQFHVLAVDDSFIDRKLIERLLQTSSYHVTAVDSGSKALEFLGLLQEHDDETD 60
           MGVALESSQFHVLAVDDSFIDRKLIERLLQTSSYHVTAVDSGSKALEFLGLLQEHDDETD
Sbjct: 1   MGVALESSQFHVLAVDDSFIDRKLIERLLQTSSYHVTAVDSGSKALEFLGLLQEHDDETD 60

Query: 61  SKIHLNHHQEVEVNLIITDYSMPGMSGYDLLRRIKESKSLKDIPVVIMSSENVPSRINRC 120
           SKIH NHHQEVEVNLIITDYSMPGMSGYDLLRRIKESKSLKDIPVVIMSSENVPSRINRC
Sbjct: 61  SKIHSNHHQEVEVNLIITDYSMPGMSGYDLLRRIKESKSLKDIPVVIMSSENVPSRINRC 120

Query: 121 LEEGAEEFFLKPVQLSDVRKLRPHLVKERSART 154
           LEEGAEEFFLKPVQLSDVRKLRPHLVKERSART
Sbjct: 121 LEEGAEEFFLKPVQLSDVRKLRPHLVKERSART 153

[Close]

BLAST of MS018730 vs. ExPASy TrEMBL
Match: A0A5D3BEM3 (Two-component response regulator ORR10-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold180G00940 PE=4 SV=1)

HSP 1 Score: 262.7 bits (670), Expect = 9.6e-67
Identity = 133/152 (87.50%), Postives = 145/152 (95.39%), Query Frame = 0


Query: 1   MGVALESSQFHVLAVDDSFIDRKLIERLLQTSSYHVTAVDSGSKALEFLGLLQEHDDETD 60
           M VALES+ FHVLAVDDSFIDRKLIERLL+TSSYHVTAVDSG+KALEFLGL+Q+HD +TD
Sbjct: 1   MVVALESTPFHVLAVDDSFIDRKLIERLLKTSSYHVTAVDSGTKALEFLGLVQDHDQQTD 60

Query: 61  SKI--HLNHHQEVEVNLIITDYSMPGMSGYDLLRRIKESKSLKDIPVVIMSSENVPSRIN 120
           SKI    +HHQEV+VNLIITDYSMPGMSGY+LLR+IKESKSLKDIPVVIMSSENVPSRIN
Sbjct: 61  SKIAPENHHHQEVDVNLIITDYSMPGMSGYELLRKIKESKSLKDIPVVIMSSENVPSRIN 120

Query: 121 RCLEEGAEEFFLKPVQLSDVRKLRPHLVKERS 151
           RCLEEGAEEFFLKPVQLSDVRKLRPHL+KE+S
Sbjct: 121 RCLEEGAEEFFLKPVQLSDVRKLRPHLIKEKS 152

[Close]

BLAST of MS018730 vs. ExPASy TrEMBL
Match: A0A1S3CPY2 (two-component response regulator ORR10-like OS=Cucumis melo OX=3656 GN=LOC103503483 PE=4 SV=1)

HSP 1 Score: 262.7 bits (670), Expect = 9.6e-67
Identity = 133/152 (87.50%), Postives = 145/152 (95.39%), Query Frame = 0


Query: 1   MGVALESSQFHVLAVDDSFIDRKLIERLLQTSSYHVTAVDSGSKALEFLGLLQEHDDETD 60
           M VALES+ FHVLAVDDSFIDRKLIERLL+TSSYHVTAVDSG+KALEFLGL+Q+HD +TD
Sbjct: 1   MVVALESTPFHVLAVDDSFIDRKLIERLLKTSSYHVTAVDSGTKALEFLGLVQDHDQQTD 60

Query: 61  SKI--HLNHHQEVEVNLIITDYSMPGMSGYDLLRRIKESKSLKDIPVVIMSSENVPSRIN 120
           SKI    +HHQEV+VNLIITDYSMPGMSGY+LLR+IKESKSLKDIPVVIMSSENVPSRIN
Sbjct: 61  SKIAPENHHHQEVDVNLIITDYSMPGMSGYELLRKIKESKSLKDIPVVIMSSENVPSRIN 120

Query: 121 RCLEEGAEEFFLKPVQLSDVRKLRPHLVKERS 151
           RCLEEGAEEFFLKPVQLSDVRKLRPHL+KE+S
Sbjct: 121 RCLEEGAEEFFLKPVQLSDVRKLRPHLIKEKS 152

[Close]

BLAST of MS018730 vs. ExPASy TrEMBL
Match: A0A6J1FFG9 (two-component response regulator ORR4-like OS=Cucurbita moschata OX=3662 GN=LOC111445004 PE=4 SV=1)

HSP 1 Score: 261.2 bits (666), Expect = 2.8e-66
Identity = 135/159 (84.91%), Postives = 146/159 (91.82%), Query Frame = 0


Query: 1   MGVALESSQFHVLAVDDSFIDRKLIERLLQTSSYHVTAVDSGSKALEFLGLLQEH----- 60
           MGVA+ES+QFHVLAVDDSFIDRKLIERLL+TSSYHVT VDSG+KALEFLGL+ +H     
Sbjct: 1   MGVAVESTQFHVLAVDDSFIDRKLIERLLKTSSYHVTVVDSGNKALEFLGLVGDHDDDDD 60

Query: 61  -DDETDSKI-HLNHHQEVEVNLIITDYSMPGMSGYDLLRRIKESKSLKDIPVVIMSSENV 120
            DDE DS+I   NHHQEV+VNLIITDYSMPGMSGYDLLR+IKESKSLKDIPVVIMSSENV
Sbjct: 61  DDDEPDSEIAPSNHHQEVDVNLIITDYSMPGMSGYDLLRKIKESKSLKDIPVVIMSSENV 120

Query: 121 PSRINRCLEEGAEEFFLKPVQLSDVRKLRPHLVKERSAR 153
           PSRINRCLEEGAEEFFLKPVQLSDVRKLRPHL+KE+S R
Sbjct: 121 PSRINRCLEEGAEEFFLKPVQLSDVRKLRPHLIKEKSTR 159

[Close]

BLAST of MS018730 vs. ExPASy TrEMBL
Match: A0A6J1K3C0 (two-component response regulator ORR4-like OS=Cucurbita maxima OX=3661 GN=LOC111489700 PE=4 SV=1)

HSP 1 Score: 260.4 bits (664), Expect = 4.8e-66
Identity = 135/156 (86.54%), Postives = 145/156 (92.95%), Query Frame = 0


Query: 1   MGVALESSQFHVLAVDDSFIDRKLIERLLQTSSYHVTAVDSGSKALEFLGLLQEH---DD 60
           MGVA+ES+QFHVLAVDDSFIDRKLIERLL+TSSYHVT VDSG+KALEFLGL  +H   DD
Sbjct: 1   MGVAVESTQFHVLAVDDSFIDRKLIERLLKTSSYHVTVVDSGNKALEFLGLDGDHDDDDD 60

Query: 61  ETDSKI-HLNHHQEVEVNLIITDYSMPGMSGYDLLRRIKESKSLKDIPVVIMSSENVPSR 120
           E DS+I   NHHQEV+VNLIITDYSMPGMSGYDLLR+IKESKSLKDIPVVIMSSENVPSR
Sbjct: 61  EPDSEIAPSNHHQEVDVNLIITDYSMPGMSGYDLLRKIKESKSLKDIPVVIMSSENVPSR 120

Query: 121 INRCLEEGAEEFFLKPVQLSDVRKLRPHLVKERSAR 153
           INRCLEEGAEEFFLKPVQLSDVRKLRPHL+KE+S R
Sbjct: 121 INRCLEEGAEEFFLKPVQLSDVRKLRPHLIKEKSTR 156

[Close]

BLAST of MS018730 vs. TAIR 10
Match: AT3G57040.1 (response regulator 9 )

HSP 1 Score: 204.5 bits (519), Expect = 6.0e-53
Identity = 108/152 (71.05%), Postives = 126/152 (82.89%), Query Frame = 0


Query: 1   MGVALESSQFHVLAVDDSFIDRKLIERLLQTSSYHVTAVDSGSKALEFLGLLQ---EHDD 60
           MG+A E SQFHVLAVDDS  DRKLIERLLQ SS  VT VDSGSKALEFLGL Q    +D 
Sbjct: 1   MGMAAE-SQFHVLAVDDSLFDRKLIERLLQKSSCQVTTVDSGSKALEFLGLRQSTDSNDP 60

Query: 61  ETDSKIHLNHHQEVEVNLIITDYSMPGMSGYDLLRRIKESKSLKDIPVVIMSSENVPSRI 120
              SK  +N HQ VEVNLIITDY MPGM+GYDLL+++KES + +DIPVVIMSSENVP+RI
Sbjct: 61  NAFSKAPVN-HQVVEVNLIITDYCMPGMTGYDLLKKVKESSAFRDIPVVIMSSENVPARI 120

Query: 121 NRCLEEGAEEFFLKPVQLSDVRKLRPHLVKER 150
           +RCLEEGAEEFFLKPV+L+D+ KL+PH++K +
Sbjct: 121 SRCLEEGAEEFFLKPVRLADLNKLKPHMMKTK 150

[Close]

BLAST of MS018730 vs. TAIR 10
Match: AT2G41310.1 (response regulator 3 )

HSP 1 Score: 197.2 bits (500), Expect = 9.6e-51
Identity = 97/142 (68.31%), Postives = 117/142 (82.39%), Query Frame = 0


Query: 8   SQFHVLAVDDSFIDRKLIERLLQTSSYHVTAVDSGSKALEFLGLLQEHDDETDSKIHLNH 67
           S+FHVLAVDDS  DRK+IERLLQ SS  VT VDSGSKALEFLGL  + +D          
Sbjct: 7   SKFHVLAVDDSLFDRKMIERLLQKSSCQVTTVDSGSKALEFLGLRVDDNDPNALSTSPQI 66

Query: 68  HQEVEVNLIITDYSMPGMSGYDLLRRIKESKSLKDIPVVIMSSENVPSRINRCLEEGAEE 127
           HQEVE+NLIITDY MPGM+GYDLL+++KES + + IPVVIMSSENVP+RI+RCLEEGAEE
Sbjct: 67  HQEVEINLIITDYCMPGMTGYDLLKKVKESAAFRSIPVVIMSSENVPARISRCLEEGAEE 126

Query: 128 FFLKPVQLSDVRKLRPHLVKER 150
           FFLKPV+L+D+ KL+PH++K +
Sbjct: 127 FFLKPVKLADLTKLKPHMMKTK 148

[Close]

BLAST of MS018730 vs. TAIR 10
Match: AT1G59940.1 (response regulator 3 )

HSP 1 Score: 167.5 bits (423), Expect = 8.1e-42
Identity = 86/144 (59.72%), Postives = 115/144 (79.86%), Query Frame = 0


Query: 5   LESSQFHVLAVDDSFIDRKLIERLLQTSSYHVTAVDSGSKALEFLGLLQEHDDETDSKIH 64
           L+S Q HVLAVDDS +DR +IERLL+ +S  VTAVDSG +ALEFLGL     D+  + + 
Sbjct: 28  LDSDQVHVLAVDDSLVDRIVIERLLRITSCKVTAVDSGWRALEFLGL-----DDDKAAVE 87

Query: 65  LNHHQEVEVNLIITDYSMPGMSGYDLLRRIKESKSLKDIPVVIMSSENVPSRINRCLEEG 124
            +    ++V+LIITDY MPGM+GY+LL++IKES S K++PVVIMSSENV +RI+RCLEEG
Sbjct: 88  FD---RLKVDLIITDYCMPGMTGYELLKKIKESTSFKEVPVVIMSSENVMTRIDRCLEEG 147

Query: 125 AEEFFLKPVQLSDVRKLRPHLVKE 149
           AE+F LKPV+L+DV++LR +L ++
Sbjct: 148 AEDFLLKPVKLADVKRLRSYLTRD 163

[Close]

BLAST of MS018730 vs. TAIR 10
Match: AT3G48100.1 (response regulator 5 )

HSP 1 Score: 164.5 bits (415), Expect = 6.9e-41
Identity = 82/137 (59.85%), Postives = 111/137 (81.02%), Query Frame = 0


Query: 11  HVLAVDDSFIDRKLIERLLQTSSYHVTAVDSGSKALEFLGLLQEHDDETDSKIHLNHHQE 70
           HVLAVDDS +DRK IERLL+ SS  VT VDS ++AL++LGL    D E +S +     ++
Sbjct: 26  HVLAVDDSMVDRKFIERLLRVSSCKVTVVDSATRALQYLGL----DGENNSSVGF---ED 85

Query: 71  VEVNLIITDYSMPGMSGYDLLRRIKESKSLKDIPVVIMSSENVPSRINRCLEEGAEEFFL 130
           +++NLI+TDYSMPGM+GY+LL++IKES + ++IPVVIMSSEN+  RI+RCLEEGAE+F L
Sbjct: 86  LKINLIMTDYSMPGMTGYELLKKIKESSAFREIPVVIMSSENILPRIDRCLEEGAEDFLL 145

Query: 131 KPVQLSDVRKLRPHLVK 148
           KPV+L+DV++LR  L+K
Sbjct: 146 KPVKLADVKRLRDSLMK 155

[Close]

BLAST of MS018730 vs. TAIR 10
Match: AT1G10470.1 (response regulator 4 )

HSP 1 Score: 164.1 bits (414), Expect = 9.0e-41
Identity = 85/144 (59.03%), Postives = 113/144 (78.47%), Query Frame = 0


Query: 5   LESSQFHVLAVDDSFIDRKLIERLLQTSSYHVTAVDSGSKALEFLGLLQEHDDETDSKIH 64
           L+  + HVLAVDDS +DR +IERLL+ +S  VTAVDSG +ALEFLGL    D+E  S   
Sbjct: 29  LDLDEVHVLAVDDSLVDRIVIERLLRITSCKVTAVDSGWRALEFLGL----DNEKASA-- 88

Query: 65  LNHHQEVEVNLIITDYSMPGMSGYDLLRRIKESKSLKDIPVVIMSSENVPSRINRCLEEG 124
                 ++V+LIITDY MPGM+GY+LL++IKES + +++PVVIMSSENV +RI+RCLEEG
Sbjct: 89  --EFDRLKVDLIITDYCMPGMTGYELLKKIKESSNFREVPVVIMSSENVLTRIDRCLEEG 148

Query: 125 AEEFFLKPVQLSDVRKLRPHLVKE 149
           A++F LKPV+L+DV++LR HL K+
Sbjct: 149 AQDFLLKPVKLADVKRLRSHLTKD 164

The following BLAST results are available for this feature:

BLAST of MS018730 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022146422.1	2.5e-77	99.35	two-component response regulator ORR4-like [Momordica charantia]	[more]
XP_023550008.1	1.2e-66	87.10	two-component response regulator ORR4-like [Cucurbita pepo subsp. pepo]	[more]
XP_008465907.1	2.0e-66	87.50	PREDICTED: two-component response regulator ORR10-like [Cucumis melo] >KAA005020...	[more]
KAG6579124.1	5.8e-66	85.90	Two-component response regulator ARR9, partial [Cucurbita argyrosperma subsp. so...	[more]
KAG7016647.1	5.8e-66	85.35	Two-component response regulator ARR9 [Cucurbita argyrosperma subsp. argyrosperm...	[more]

BLAST of MS018730 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q4GZK7	4.9e-52	70.00	Two-component response regulator ORR4 OS=Oryza sativa subsp. indica OX=39946 GN=...	[more]
Q942A1	4.9e-52	70.00	Two-component response regulator ORR4 OS=Oryza sativa subsp. japonica OX=39947 G...	[more]
O80366	8.4e-52	71.05	Two-component response regulator ARR9 OS=Arabidopsis thaliana OX=3702 GN=ARR9 PE...	[more]
Q4GZK2	2.4e-51	71.14	Two-component response regulator ORR9 OS=Oryza sativa subsp. indica OX=39946 GN=...	[more]
Q2RAP3	2.4e-51	71.14	Two-component response regulator ORR9 OS=Oryza sativa subsp. japonica OX=39947 G...	[more]

BLAST of MS018730 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1CZJ3	1.2e-77	99.35	two-component response regulator ORR4-like OS=Momordica charantia OX=3673 GN=LOC...	[more]
A0A5D3BEM3	9.6e-67	87.50	Two-component response regulator ORR10-like OS=Cucumis melo var. makuwa OX=11946...	[more]
A0A1S3CPY2	9.6e-67	87.50	two-component response regulator ORR10-like OS=Cucumis melo OX=3656 GN=LOC103503...	[more]
A0A6J1FFG9	2.8e-66	84.91	two-component response regulator ORR4-like OS=Cucurbita moschata OX=3662 GN=LOC1...	[more]
A0A6J1K3C0	4.8e-66	86.54	two-component response regulator ORR4-like OS=Cucurbita maxima OX=3661 GN=LOC111...	[more]

BLAST of MS018730 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G57040.1	6.0e-53	71.05	response regulator 9	[more]
AT2G41310.1	9.6e-51	68.31	response regulator 3	[more]
AT1G59940.1	8.1e-42	59.72	response regulator 3	[more]
AT3G48100.1	6.9e-41	59.85	response regulator 5	[more]
AT1G10470.1	9.0e-41	59.03	response regulator 4	[more]

InterPro

Analysis Name: InterPro Annotations of Bitter gourd (TR) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001789	Signal transduction response regulator, receiver domain	SMART	SM00448	REC_2	coord: 10..142 e-value: 6.0E-21 score: 85.6
IPR001789	Signal transduction response regulator, receiver domain	PFAM	PF00072	Response_reg	coord: 12..140 e-value: 2.3E-21 score: 76.1
IPR001789	Signal transduction response regulator, receiver domain	PROSITE	PS50110	RESPONSE_REGULATORY	coord: 11..146 score: 35.157295
None	No IPR available	GENE3D	3.40.50.2300		coord: 11..153 e-value: 6.7E-33 score: 116.7
None	No IPR available	PANTHER	PTHR43874	TWO-COMPONENT RESPONSE REGULATOR	coord: 3..150
None	No IPR available	PANTHER	PTHR43874:SF140	RESPONSE REGULATOR ARR8, PUTATIVE-RELATED	coord: 3..150
None	No IPR available	CDD	cd17581	REC_typeA_ARR	coord: 12..141 e-value: 5.07958E-75 score: 217.619
IPR011006	CheY-like superfamily	SUPERFAMILY	52172	CheY-like	coord: 9..142

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
MS018730.1	MS018730.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0000160	phosphorelay signal transduction system