MS018690 (gene) Bitter gourd (TR) v1

Overview


Name	MS018690
Type	gene
Organism	Momordica charantia cv. TR (Bitter gourd (TR) v1)
Description	ethylene-responsive transcription factor LEP
Location	scaffold313: 1086990 .. 1087658 (-)
RNA-Seq Expression	MS018690
Synteny	MS018690

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGAGTCCATCGCCGTCGAAGCCTAAGCGGAAGCAGCCGCCGCCGACGCCGGAAACGGCGTCGCACCGTTTCCTTGGCGTTCGGCGGCGGCCGTGGGGGCGATACGCCGCCGAGATTAGAGATCCTTCCACCAAAGAACGCCACTGGCTCGGCACCTTCGACACCGCCGAGGAAGCCGCCCTCGCCTACGACCGCGCCGCCCGCTCCCTCCGCGGCTCCCTCGCCCGCACCAACTTCCTTTACTCCGACTCGCCGCCGCCGCTGCCGCCCTCCGCCGCCGTCTCTCACGGCCAGCTTCCGCCACCTCCCCTGCCTCCTCCTCTGTTTCTTCCTCTGCTTCCTCCAAATCCGCCGCCTCTCTTCGACCAATTCCCCGCCGCTGGAGACTCCTCGGCAAGTTTCTTCGCTGGATTCGACGATGGCGGTGCTGAGCTTCCGCCATTTCCTCCGGCAATTTCGTCGGAATCGGAGAATTATAATTATAATAACTGTCTGATGGAAACACAGAACATTGGTTTAGAATCTCTTGATCAGTCGTCGATGGGAATCGGATCGTACTTCGGATTTGATTCCGGCGGTGAGTACGTGCAGAGCCCGATCTTTGGAACAATGCCTGCGGTTTCCGACGCCCTCGCCAGTGATTTTGAGTCTCCGGCCAATTTCTATTTC

mRNA sequence

ATGAGTCCATCGCCGTCGAAGCCTAAGCGGAAGCAGCCGCCGCCGACGCCGGAAACGGCGTCGCACCGTTTCCTTGGCGTTCGGCGGCGGCCGTGGGGGCGATACGCCGCCGAGATTAGAGATCCTTCCACCAAAGAACGCCACTGGCTCGGCACCTTCGACACCGCCGAGGAAGCCGCCCTCGCCTACGACCGCGCCGCCCGCTCCCTCCGCGGCTCCCTCGCCCGCACCAACTTCCTTTACTCCGACTCGCCGCCGCCGCTGCCGCCCTCCGCCGCCGTCTCTCACGGCCAGCTTCCGCCACCTCCCCTGCCTCCTCCTCTGTTTCTTCCTCTGCTTCCTCCAAATCCGCCGCCTCTCTTCGACCAATTCCCCGCCGCTGGAGACTCCTCGGCAAGTTTCTTCGCTGGATTCGACGATGGCGGTGCTGAGCTTCCGCCATTTCCTCCGGCAATTTCGTCGGAATCGGAGAATTATAATTATAATAACTGTCTGATGGAAACACAGAACATTGGTTTAGAATCTCTTGATCAGTCGTCGATGGGAATCGGATCGTACTTCGGATTTGATTCCGGCGGTGAGTACGTGCAGAGCCCGATCTTTGGAACAATGCCTGCGGTTTCCGACGCCCTCGCCAGTGATTTTGAGTCTCCGGCCAATTTCTATTTC

Coding sequence (CDS)

ATGAGTCCATCGCCGTCGAAGCCTAAGCGGAAGCAGCCGCCGCCGACGCCGGAAACGGCGTCGCACCGTTTCCTTGGCGTTCGGCGGCGGCCGTGGGGGCGATACGCCGCCGAGATTAGAGATCCTTCCACCAAAGAACGCCACTGGCTCGGCACCTTCGACACCGCCGAGGAAGCCGCCCTCGCCTACGACCGCGCCGCCCGCTCCCTCCGCGGCTCCCTCGCCCGCACCAACTTCCTTTACTCCGACTCGCCGCCGCCGCTGCCGCCCTCCGCCGCCGTCTCTCACGGCCAGCTTCCGCCACCTCCCCTGCCTCCTCCTCTGTTTCTTCCTCTGCTTCCTCCAAATCCGCCGCCTCTCTTCGACCAATTCCCCGCCGCTGGAGACTCCTCGGCAAGTTTCTTCGCTGGATTCGACGATGGCGGTGCTGAGCTTCCGCCATTTCCTCCGGCAATTTCGTCGGAATCGGAGAATTATAATTATAATAACTGTCTGATGGAAACACAGAACATTGGTTTAGAATCTCTTGATCAGTCGTCGATGGGAATCGGATCGTACTTCGGATTTGATTCCGGCGGTGAGTACGTGCAGAGCCCGATCTTTGGAACAATGCCTGCGGTTTCCGACGCCCTCGCCAGTGATTTTGAGTCTCCGGCCAATTTCTATTTC

Protein sequence

MSPSPSKPKRKQPPPTPETASHRFLGVRRRPWGRYAAEIRDPSTKERHWLGTFDTAEEAALAYDRAARSLRGSLARTNFLYSDSPPPLPPSAAVSHGQLPPPPLPPPLFLPLLPPNPPPLFDQFPAAGDSSASFFAGFDDGGAELPPFPPAISSESENYNYNNCLMETQNIGLESLDQSSMGIGSYFGFDSGGEYVQSPIFGTMPAVSDALASDFESPANFYF

Homology

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BLAST of MS018690 vs. NCBI nr
Match: XP_022141682.1 (ethylene-responsive transcription factor LEP [Momordica charantia])

HSP 1 Score: 437.2 bits (1123), Expect = 8.6e-119
Identity = 220/223 (98.65%), Postives = 221/223 (99.10%), Query Frame = 0


Query: 1   MSPSPSKPKRKQPPPTPETASHRFLGVRRRPWGRYAAEIRDPSTKERHWLGTFDTAEEAA 60
           MSPSPSKPKRKQPPP PETASHRFLGVRRRPWGRYAAEIRDPSTKERHWLGTFDTAEEAA
Sbjct: 1   MSPSPSKPKRKQPPPPPETASHRFLGVRRRPWGRYAAEIRDPSTKERHWLGTFDTAEEAA 60

Query: 61  LAYDRAARSLRGSLARTNFLYSDSPPPLPPSAAVSHGQLPPPPLPPPLFLPLLPPNPPPL 120
           LAYDRAARSLRGSLARTNFLYSDSPPPLPPSAAVSHGQLPPPPLPPPLFLPLLPP+ PPL
Sbjct: 61  LAYDRAARSLRGSLARTNFLYSDSPPPLPPSAAVSHGQLPPPPLPPPLFLPLLPPDSPPL 120

Query: 121 FDQFPAAGDSSASFFAGFDDGGAELPPFPPAISSESENYNYNNCLMETQNIGLESLDQSS 180
           FDQFPAAGDSSASFFAGFDDGGAELPPFPPAISSESENYNYNNCLMETQNIGLESLDQSS
Sbjct: 121 FDQFPAAGDSSASFFAGFDDGGAELPPFPPAISSESENYNYNNCLMETQNIGLESLDQSS 180

Query: 181 MGIGSYFGFDSGGEYVQSPIFGTMPAVSDALASDFESPANFYF 224
           MGIGSYFGFDSGGEYVQSPIFGTMPAVSDALASDFESPANFYF
Sbjct: 181 MGIGSYFGFDSGGEYVQSPIFGTMPAVSDALASDFESPANFYF 223

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BLAST of MS018690 vs. NCBI nr
Match: KAA0066104.1 (ethylene-responsive transcription factor LEP [Cucumis melo var. makuwa] >TYK15143.1 ethylene-responsive transcription factor LEP [Cucumis melo var. makuwa])

HSP 1 Score: 288.5 bits (737), Expect = 4.9e-74
Identity = 160/226 (70.80%), Postives = 175/226 (77.43%), Query Frame = 0


Query: 1   MSPSPSKPKRK-QPPPTPETASHRFLGVRRRPWGRYAAEIRDPSTKERHWLGTFDTAEEA 60
           MSPSPSKPKRK  PPP  E   HRFLGVRRRPWGRYAAEIRDPSTKERHWLGTFDTAEEA
Sbjct: 1   MSPSPSKPKRKHHPPPPAEPTPHRFLGVRRRPWGRYAAEIRDPSTKERHWLGTFDTAEEA 60

Query: 61  ALAYDRAARSLRGSLARTNFLYSDSPPPLPPSAAVSHGQLPPPPLPPPLFLPLLPPNPPP 120
           A+AYDRAARSLRGSLARTNFLYSDSPPP PP  + S       P  PPLFLPLLPP PPP
Sbjct: 61  AIAYDRAARSLRGSLARTNFLYSDSPPPPPPPYSAS-----IHPSQPPLFLPLLPPPPPP 120

Query: 121 LFDQFPAAGDS-SASFFAGFDDGGAELPPFPPAISSESENYNYNNC-LMETQNIGLESLD 180
           LF QFP AGDS S   +  +D   AELPPFPPAISSESEN +YNN   ME+QN+G E  D
Sbjct: 121 LFHQFPPAGDSPSGIIYGDYDGSSAELPPFPPAISSESENCDYNNYGAMESQNVGFECFD 180

Query: 181 QSSMGIGSYFGFDSGGEYVQSPIFGTMPAVSDALASDFESP-ANFY 223
           QSS+G+GS  GFDS G+Y+ +P+ G+M  VSDA   D +SP ANFY
Sbjct: 181 QSSIGMGSCLGFDSSGDYMYNPMLGSMATVSDAGTGDLQSPAANFY 221

[Close]

BLAST of MS018690 vs. NCBI nr
Match: XP_022990620.1 (ethylene-responsive transcription factor LEP-like [Cucurbita maxima])

HSP 1 Score: 286.2 bits (731), Expect = 2.4e-73
Identity = 165/228 (72.37%), Postives = 169/228 (74.12%), Query Frame = 0


Query: 1   MSPSPSKPKRKQPPPTPETASHRFLGVRRRPWGRYAAEIRDPSTKERHWLGTFDTAEEAA 60
           MSPSPSKPKRKQ  P PET SHRFLGVRRRPWGRYAAEIRDPSTKERHWLGTFDTAEEAA
Sbjct: 1   MSPSPSKPKRKQQQPPPETTSHRFLGVRRRPWGRYAAEIRDPSTKERHWLGTFDTAEEAA 60

Query: 61  LAYDRAARSLRGSLARTNFLYSDSPPPLPPSAAVSHGQLPPPPLPPPLFLPLLPPNPPPL 120
           +AYD AARSLRGSLARTNFLYSDS PP PP         PP    PP   PLL P PPP 
Sbjct: 61  VAYDCAARSLRGSLARTNFLYSDSLPPPPP---------PPSAALPPNQAPLLLPTPPPH 120

Query: 121 FDQFPAAGDSSASFFAGFDDGGAELPPFPPAISSESE----NYNYNNCLMETQNIGLESL 180
           F Q P + DS  S F+   DGGAELPPFPPAISSESE    NYNYN  LME QN G E  
Sbjct: 121 FHQIPPSRDSPPSLFSVDGDGGAELPPFPPAISSESENYNYNYNYNQGLMELQNSGFEYF 180

Query: 181 DQSSMGIGSYFGFDSGGEYVQSPIFGTMPAVSDALASDFESP-ANFYF 224
           DQSS  IGS FGFDS  EYV  PIF +MPAVSDA A DF SP ANFYF
Sbjct: 181 DQSSTEIGSCFGFDSSSEYVHGPIFSSMPAVSDAGAGDFPSPAANFYF 219

[Close]

BLAST of MS018690 vs. NCBI nr
Match: XP_023541749.1 (ethylene-responsive transcription factor LEP-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 282.7 bits (722), Expect = 2.7e-72
Identity = 163/228 (71.49%), Postives = 168/228 (73.68%), Query Frame = 0


Query: 1   MSPSPSKPKRKQPPPTPETASHRFLGVRRRPWGRYAAEIRDPSTKERHWLGTFDTAEEAA 60
           MSPSPSKPKRKQ  P PET  HRFLGVRRRPWGRYAAEIRDPSTKERHWLGTFDTAEEAA
Sbjct: 1   MSPSPSKPKRKQQQPPPETTPHRFLGVRRRPWGRYAAEIRDPSTKERHWLGTFDTAEEAA 60

Query: 61  LAYDRAARSLRGSLARTNFLYSDSPPPLPPSAAVSHGQLPPPPLPPPLFLPLLPPNPPPL 120
           +AYD AARSLRGSLARTNFLYSDS PP PP         PP    PP   PLL P PPP 
Sbjct: 61  VAYDCAARSLRGSLARTNFLYSDSLPPPPP---------PPSAALPPNQAPLLLPTPPPH 120

Query: 121 FDQFPAAGDSSASFFAGFDDGGAELPPFPPAISSESE----NYNYNNCLMETQNIGLESL 180
           F Q P + DS  S F+   DGGAELPPFPPAISSESE    NYNYN  LME QN G E  
Sbjct: 121 FHQIPPSRDSPPSLFSVDGDGGAELPPFPPAISSESENYNYNYNYNQGLMELQNSGFEYF 180

Query: 181 DQSSMGIGSYFGFDSGGEYVQSPIFGTMPAVSDALASDFESP-ANFYF 224
           DQS   IGS FGFDS  EYV  PIFG+MPAVSDA A +F SP ANFYF
Sbjct: 181 DQSPTDIGSCFGFDSSSEYVHGPIFGSMPAVSDAGAGEFLSPAANFYF 219

[Close]

BLAST of MS018690 vs. NCBI nr
Match: XP_022963669.1 (ethylene-responsive transcription factor LEP-like [Cucurbita moschata] >KAG6601967.1 Ethylene-responsive transcription factor LEP, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 277.3 bits (708), Expect = 1.1e-70
Identity = 161/232 (69.40%), Postives = 167/232 (71.98%), Query Frame = 0


Query: 1   MSPSPSKPKRKQPPPTPETASHRFLGVRRRPWGRYAAEIRDPSTKERHWLGTFDTAEEAA 60
           MSPSPSKPKRKQ  P PET  HRFLGVRRRPWGRYAAEIRDPSTKERHWLGTFDTAEEAA
Sbjct: 1   MSPSPSKPKRKQQQPPPETTPHRFLGVRRRPWGRYAAEIRDPSTKERHWLGTFDTAEEAA 60

Query: 61  LAYDRAARSLRGSLARTNFLYSDSPPPLPPSAAVSHGQLPPPPLPPPLFLPLLPPNPPPL 120
           +AYD AARSLRGSLARTNFLYSDS PP PP         PP    PP   PLL P PPP 
Sbjct: 61  VAYDCAARSLRGSLARTNFLYSDSLPPPPP---------PPSAALPPNQAPLLLPTPPPH 120

Query: 121 FDQFPAAGDSSASFFAGFDDGGAELPPFPPAISSESE--------NYNYNNCLMETQNIG 180
           F Q P + DS  S F+   DGGAELPPFPPAISSESE        NYNYN  LME QN G
Sbjct: 121 FHQIPPSRDSPPSLFSVDGDGGAELPPFPPAISSESENYNYNYNYNYNYNQGLMELQNSG 180

Query: 181 LESLDQSSMGIGSYFGFDSGGEYVQSPIFGTMPAVSDALASDFESP-ANFYF 224
            E  +QS   IGS FGFDS  EYV  PIF +MPAVSDA A +F SP ANFYF
Sbjct: 181 FEYFNQSPTEIGSCFGFDSSSEYVHGPIFSSMPAVSDAGAGEFPSPAANFYF 223

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BLAST of MS018690 vs. ExPASy Swiss-Prot
Match: Q9M644 (Ethylene-responsive transcription factor LEP OS=Arabidopsis thaliana OX=3702 GN=LEP PE=2 SV=1)

HSP 1 Score: 149.8 bits (377), Expect = 3.6e-35
Identity = 103/233 (44.21%), Postives = 129/233 (55.36%), Query Frame = 0


Query: 1   MSPSPSKPKRKQPPPTPETASHRFLGVRRRPWGRYAAEIRDPSTKERHWLGTFDTAEEAA 60
           M+ + SK K+KQ     +    RFLGVRRRPWGRYAAEIRDP+TKERHWLGTFDTAEEAA
Sbjct: 1   MNTTSSKSKKKQ----DDQVGTRFLGVRRRPWGRYAAEIRDPTTKERHWLGTFDTAEEAA 60

Query: 61  LAYDRAARSLRGSLARTNFLYSDSPPPLPPSAAVSHGQLPPPPLPPP-----------LF 120
           LAYDRAARS+RG+ ARTNF+YSD PP    ++ VS    PPPP PP            +F
Sbjct: 61  LAYDRAARSMRGTRARTNFVYSDMPPSSSVTSIVSPDDPPPPPPPPAPPSNDPVDYMMMF 120

Query: 121 -------LPLLPPNPPPLFDQFPAAGDSSASFFAGFDDGGAELPPFPPAISSESENYNYN 180
                   P+L P+   + D +   G  S++ +   +D   ELPP P  +S        N
Sbjct: 121 NQYSSTDSPMLQPHCDQV-DSYMFGGSQSSNSYCYSNDSSNELPPLPSDLS--------N 180

Query: 181 NCLMETQNIGLESLDQSSMGIGSYFGFDSGGEYVQSPIFGTMPAVSDALASDF 216
           +C  + Q               ++ G D   EYV SP+F  MP VSD+    F
Sbjct: 181 SCYSQPQ--------------WTWTGDDYSSEYVHSPMFSRMPPVSDSFPQGF 206

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BLAST of MS018690 vs. ExPASy Swiss-Prot
Match: Q9FZ90 (Ethylene-responsive transcription factor ERF087 OS=Arabidopsis thaliana OX=3702 GN=ERF087 PE=2 SV=1)

HSP 1 Score: 116.3 bits (290), Expect = 4.4e-25
Identity = 59/88 (67.05%), Postives = 70/88 (79.55%), Query Frame = 0


Query: 2   SPSPSKPKRKQPPPTPETASH----RFLGVRRRPWGRYAAEIRDPSTKERHWLGTFDTAE 61
           S S    ++KQ  P P+   H    +++GVRRRPWGRYAAEIR+P+TKER+WLGTFDTAE
Sbjct: 13  SRSKKSHRQKQQQPQPQPQQHIEEIKYVGVRRRPWGRYAAEIRNPTTKERYWLGTFDTAE 72

Query: 62  EAALAYDRAARSLRGSLARTNFLYSDSP 86
           EAALAYDRAARS+RG  ARTNF+YSD P
Sbjct: 73  EAALAYDRAARSIRGLTARTNFVYSDMP 100

[Close]

BLAST of MS018690 vs. ExPASy Swiss-Prot
Match: Q6J9Q2 (Ethylene-responsive transcription factor ERF086 OS=Arabidopsis thaliana OX=3702 GN=ERF086 PE=1 SV=2)

HSP 1 Score: 113.6 bits (283), Expect = 2.8e-24
Identity = 52/60 (86.67%), Postives = 57/60 (95.00%), Query Frame = 0


Query: 23  RFLGVRRRPWGRYAAEIRDPSTKERHWLGTFDTAEEAALAYDRAARSLRGSLARTNFLYS 82
           RFLGVRRRPWGRYAAEIRDP+TKERHWLGTFDTA EAALAYDRAA S+RG+ ARTNF+Y+
Sbjct: 54  RFLGVRRRPWGRYAAEIRDPTTKERHWLGTFDTAHEAALAYDRAALSMRGTQARTNFVYT 113

[Close]

BLAST of MS018690 vs. ExPASy Swiss-Prot
Match: Q8H3Q1 (Ethylene-responsive transcription factor FZP OS=Oryza sativa subsp. japonica OX=39947 GN=FZP PE=1 SV=1)

HSP 1 Score: 112.8 bits (281), Expect = 4.9e-24
Identity = 60/99 (60.61%), Postives = 71/99 (71.72%), Query Frame = 0


Query: 3   PSPSKPKRKQPPPTPETASH-----RFLGVRRRPWGRYAAEIRDPSTKERHWLGTFDTAE 62
           PSP      + PP+  +        RFLGVRRRPWGRYAAEIRDP+TKERHWLGTFDTA+
Sbjct: 32  PSPPSSPMSERPPSGRSRRRAQEPGRFLGVRRRPWGRYAAEIRDPTTKERHWLGTFDTAQ 91

Query: 63  EAALAYDRAARSLRGSLARTNFLYSDSPPPLPPSAAVSH 97
           EAALAYDRAA S++G+ ARTNF+Y+ +    PP  A  H
Sbjct: 92  EAALAYDRAALSMKGAQARTNFVYTHAAYNYPPFLAPFH 130

[Close]

BLAST of MS018690 vs. ExPASy Swiss-Prot
Match: Q3E703 (Ethylene-responsive transcription factor ERF088 OS=Arabidopsis thaliana OX=3702 GN=ERF088 PE=1 SV=1)

HSP 1 Score: 103.2 bits (256), Expect = 3.9e-21
Identity = 55/84 (65.48%), Postives = 64/84 (76.19%), Query Frame = 0


Query: 1  MSPSPSKPKRKQPPPTPETASHRFLGVRRRPWGRYAAEIRDPSTKERHWLGTFDTAEEAA 60
          M  S +K K K+     E    ++LGVRRRPWGRYAAEIR+P TKERHWLGTFDTAEEAA
Sbjct: 1  MLKSSNKRKSKEEKKLQE---GKYLGVRRRPWGRYAAEIRNPFTKERHWLGTFDTAEEAA 60

Query: 61 LAYDRAARSLRGSLARTNFLYSDS 85
           AYD AARS+ GSLA TNF Y+++
Sbjct: 61 FAYDVAARSISGSLATTNFFYTEN 81

[Close]

BLAST of MS018690 vs. ExPASy TrEMBL
Match: A0A6J1CKI8 (ethylene-responsive transcription factor LEP OS=Momordica charantia OX=3673 GN=LOC111011985 PE=4 SV=1)

HSP 1 Score: 437.2 bits (1123), Expect = 4.2e-119
Identity = 220/223 (98.65%), Postives = 221/223 (99.10%), Query Frame = 0


Query: 1   MSPSPSKPKRKQPPPTPETASHRFLGVRRRPWGRYAAEIRDPSTKERHWLGTFDTAEEAA 60
           MSPSPSKPKRKQPPP PETASHRFLGVRRRPWGRYAAEIRDPSTKERHWLGTFDTAEEAA
Sbjct: 1   MSPSPSKPKRKQPPPPPETASHRFLGVRRRPWGRYAAEIRDPSTKERHWLGTFDTAEEAA 60

Query: 61  LAYDRAARSLRGSLARTNFLYSDSPPPLPPSAAVSHGQLPPPPLPPPLFLPLLPPNPPPL 120
           LAYDRAARSLRGSLARTNFLYSDSPPPLPPSAAVSHGQLPPPPLPPPLFLPLLPP+ PPL
Sbjct: 61  LAYDRAARSLRGSLARTNFLYSDSPPPLPPSAAVSHGQLPPPPLPPPLFLPLLPPDSPPL 120

Query: 121 FDQFPAAGDSSASFFAGFDDGGAELPPFPPAISSESENYNYNNCLMETQNIGLESLDQSS 180
           FDQFPAAGDSSASFFAGFDDGGAELPPFPPAISSESENYNYNNCLMETQNIGLESLDQSS
Sbjct: 121 FDQFPAAGDSSASFFAGFDDGGAELPPFPPAISSESENYNYNNCLMETQNIGLESLDQSS 180

Query: 181 MGIGSYFGFDSGGEYVQSPIFGTMPAVSDALASDFESPANFYF 224
           MGIGSYFGFDSGGEYVQSPIFGTMPAVSDALASDFESPANFYF
Sbjct: 181 MGIGSYFGFDSGGEYVQSPIFGTMPAVSDALASDFESPANFYF 223

[Close]

BLAST of MS018690 vs. ExPASy TrEMBL
Match: A0A5A7VFL7 (Ethylene-responsive transcription factor LEP OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold790G00060 PE=4 SV=1)

HSP 1 Score: 288.5 bits (737), Expect = 2.4e-74
Identity = 160/226 (70.80%), Postives = 175/226 (77.43%), Query Frame = 0


Query: 1   MSPSPSKPKRK-QPPPTPETASHRFLGVRRRPWGRYAAEIRDPSTKERHWLGTFDTAEEA 60
           MSPSPSKPKRK  PPP  E   HRFLGVRRRPWGRYAAEIRDPSTKERHWLGTFDTAEEA
Sbjct: 1   MSPSPSKPKRKHHPPPPAEPTPHRFLGVRRRPWGRYAAEIRDPSTKERHWLGTFDTAEEA 60

Query: 61  ALAYDRAARSLRGSLARTNFLYSDSPPPLPPSAAVSHGQLPPPPLPPPLFLPLLPPNPPP 120
           A+AYDRAARSLRGSLARTNFLYSDSPPP PP  + S       P  PPLFLPLLPP PPP
Sbjct: 61  AIAYDRAARSLRGSLARTNFLYSDSPPPPPPPYSAS-----IHPSQPPLFLPLLPPPPPP 120

Query: 121 LFDQFPAAGDS-SASFFAGFDDGGAELPPFPPAISSESENYNYNNC-LMETQNIGLESLD 180
           LF QFP AGDS S   +  +D   AELPPFPPAISSESEN +YNN   ME+QN+G E  D
Sbjct: 121 LFHQFPPAGDSPSGIIYGDYDGSSAELPPFPPAISSESENCDYNNYGAMESQNVGFECFD 180

Query: 181 QSSMGIGSYFGFDSGGEYVQSPIFGTMPAVSDALASDFESP-ANFY 223
           QSS+G+GS  GFDS G+Y+ +P+ G+M  VSDA   D +SP ANFY
Sbjct: 181 QSSIGMGSCLGFDSSGDYMYNPMLGSMATVSDAGTGDLQSPAANFY 221

[Close]

BLAST of MS018690 vs. ExPASy TrEMBL
Match: A0A6J1JQK9 (ethylene-responsive transcription factor LEP-like OS=Cucurbita maxima OX=3661 GN=LOC111487448 PE=4 SV=1)

HSP 1 Score: 286.2 bits (731), Expect = 1.2e-73
Identity = 165/228 (72.37%), Postives = 169/228 (74.12%), Query Frame = 0


Query: 1   MSPSPSKPKRKQPPPTPETASHRFLGVRRRPWGRYAAEIRDPSTKERHWLGTFDTAEEAA 60
           MSPSPSKPKRKQ  P PET SHRFLGVRRRPWGRYAAEIRDPSTKERHWLGTFDTAEEAA
Sbjct: 1   MSPSPSKPKRKQQQPPPETTSHRFLGVRRRPWGRYAAEIRDPSTKERHWLGTFDTAEEAA 60

Query: 61  LAYDRAARSLRGSLARTNFLYSDSPPPLPPSAAVSHGQLPPPPLPPPLFLPLLPPNPPPL 120
           +AYD AARSLRGSLARTNFLYSDS PP PP         PP    PP   PLL P PPP 
Sbjct: 61  VAYDCAARSLRGSLARTNFLYSDSLPPPPP---------PPSAALPPNQAPLLLPTPPPH 120

Query: 121 FDQFPAAGDSSASFFAGFDDGGAELPPFPPAISSESE----NYNYNNCLMETQNIGLESL 180
           F Q P + DS  S F+   DGGAELPPFPPAISSESE    NYNYN  LME QN G E  
Sbjct: 121 FHQIPPSRDSPPSLFSVDGDGGAELPPFPPAISSESENYNYNYNYNQGLMELQNSGFEYF 180

Query: 181 DQSSMGIGSYFGFDSGGEYVQSPIFGTMPAVSDALASDFESP-ANFYF 224
           DQSS  IGS FGFDS  EYV  PIF +MPAVSDA A DF SP ANFYF
Sbjct: 181 DQSSTEIGSCFGFDSSSEYVHGPIFSSMPAVSDAGAGDFPSPAANFYF 219

[Close]

BLAST of MS018690 vs. ExPASy TrEMBL
Match: A0A6J1HKV8 (ethylene-responsive transcription factor LEP-like OS=Cucurbita moschata OX=3662 GN=LOC111463929 PE=4 SV=1)

HSP 1 Score: 277.3 bits (708), Expect = 5.5e-71
Identity = 161/232 (69.40%), Postives = 167/232 (71.98%), Query Frame = 0


Query: 1   MSPSPSKPKRKQPPPTPETASHRFLGVRRRPWGRYAAEIRDPSTKERHWLGTFDTAEEAA 60
           MSPSPSKPKRKQ  P PET  HRFLGVRRRPWGRYAAEIRDPSTKERHWLGTFDTAEEAA
Sbjct: 1   MSPSPSKPKRKQQQPPPETTPHRFLGVRRRPWGRYAAEIRDPSTKERHWLGTFDTAEEAA 60

Query: 61  LAYDRAARSLRGSLARTNFLYSDSPPPLPPSAAVSHGQLPPPPLPPPLFLPLLPPNPPPL 120
           +AYD AARSLRGSLARTNFLYSDS PP PP         PP    PP   PLL P PPP 
Sbjct: 61  VAYDCAARSLRGSLARTNFLYSDSLPPPPP---------PPSAALPPNQAPLLLPTPPPH 120

Query: 121 FDQFPAAGDSSASFFAGFDDGGAELPPFPPAISSESE--------NYNYNNCLMETQNIG 180
           F Q P + DS  S F+   DGGAELPPFPPAISSESE        NYNYN  LME QN G
Sbjct: 121 FHQIPPSRDSPPSLFSVDGDGGAELPPFPPAISSESENYNYNYNYNYNYNQGLMELQNSG 180

Query: 181 LESLDQSSMGIGSYFGFDSGGEYVQSPIFGTMPAVSDALASDFESP-ANFYF 224
            E  +QS   IGS FGFDS  EYV  PIF +MPAVSDA A +F SP ANFYF
Sbjct: 181 FEYFNQSPTEIGSCFGFDSSSEYVHGPIFSSMPAVSDAGAGEFPSPAANFYF 223

[Close]

BLAST of MS018690 vs. ExPASy TrEMBL
Match: A0A1S3AU89 (ethylene-responsive transcription factor LEP OS=Cucumis melo OX=3656 GN=LOC103483013 PE=4 SV=1)

HSP 1 Score: 272.3 bits (695), Expect = 1.8e-69
Identity = 150/221 (67.87%), Postives = 165/221 (74.66%), Query Frame = 0


Query: 5   PSKPKRKQPPPTPETASHRFLGVRRRPWGRYAAEIRDPSTKERHWLGTFDTAEEAALAYD 64
           P  PK    P   E   HRFLGVRRRPWGRYAAEIRDPSTKERHWLGTFDTAEEAA+AYD
Sbjct: 5   PQNPKESTTPAPAEPTPHRFLGVRRRPWGRYAAEIRDPSTKERHWLGTFDTAEEAAIAYD 64

Query: 65  RAARSLRGSLARTNFLYSDSPPPLPPSAAVSHGQLPPPPLPPPLFLPLLPPNPPPLFDQF 124
           RAARSLRGSLARTNFLYSDSPPP PP  + S       P  PPLFLPLLPP PPPLF QF
Sbjct: 65  RAARSLRGSLARTNFLYSDSPPPPPPPYSAS-----IHPSQPPLFLPLLPPPPPPLFHQF 124

Query: 125 PAAGDS-SASFFAGFDDGGAELPPFPPAISSESENYNYNNC-LMETQNIGLESLDQSSMG 184
           P AGDS S   +  +D   AELPPFPPAISSESEN +YNN   ME+QN+G E  DQSS+G
Sbjct: 125 PPAGDSPSGIIYGDYDGSSAELPPFPPAISSESENCDYNNYGAMESQNVGFECFDQSSIG 184

Query: 185 IGSYFGFDSGGEYVQSPIFGTMPAVSDALASDFESP-ANFY 223
           +GS  GFDS G+Y+ +P+ G+M  VSDA   D +SP ANFY
Sbjct: 185 MGSCLGFDSSGDYMYNPMLGSMATVSDAGTGDLQSPAANFY 220

[Close]

BLAST of MS018690 vs. TAIR 10
Match: AT5G13910.1 (Integrase-type DNA-binding superfamily protein )

HSP 1 Score: 149.8 bits (377), Expect = 2.5e-36
Identity = 103/233 (44.21%), Postives = 129/233 (55.36%), Query Frame = 0


Query: 1   MSPSPSKPKRKQPPPTPETASHRFLGVRRRPWGRYAAEIRDPSTKERHWLGTFDTAEEAA 60
           M+ + SK K+KQ     +    RFLGVRRRPWGRYAAEIRDP+TKERHWLGTFDTAEEAA
Sbjct: 1   MNTTSSKSKKKQ----DDQVGTRFLGVRRRPWGRYAAEIRDPTTKERHWLGTFDTAEEAA 60

Query: 61  LAYDRAARSLRGSLARTNFLYSDSPPPLPPSAAVSHGQLPPPPLPPP-----------LF 120
           LAYDRAARS+RG+ ARTNF+YSD PP    ++ VS    PPPP PP            +F
Sbjct: 61  LAYDRAARSMRGTRARTNFVYSDMPPSSSVTSIVSPDDPPPPPPPPAPPSNDPVDYMMMF 120

Query: 121 -------LPLLPPNPPPLFDQFPAAGDSSASFFAGFDDGGAELPPFPPAISSESENYNYN 180
                   P+L P+   + D +   G  S++ +   +D   ELPP P  +S        N
Sbjct: 121 NQYSSTDSPMLQPHCDQV-DSYMFGGSQSSNSYCYSNDSSNELPPLPSDLS--------N 180

Query: 181 NCLMETQNIGLESLDQSSMGIGSYFGFDSGGEYVQSPIFGTMPAVSDALASDF 216
           +C  + Q               ++ G D   EYV SP+F  MP VSD+    F
Sbjct: 181 SCYSQPQ--------------WTWTGDDYSSEYVHSPMFSRMPPVSDSFPQGF 206

[Close]

BLAST of MS018690 vs. TAIR 10
Match: AT1G28160.1 (Integrase-type DNA-binding superfamily protein )

HSP 1 Score: 116.3 bits (290), Expect = 3.1e-26
Identity = 59/88 (67.05%), Postives = 70/88 (79.55%), Query Frame = 0


Query: 2   SPSPSKPKRKQPPPTPETASH----RFLGVRRRPWGRYAAEIRDPSTKERHWLGTFDTAE 61
           S S    ++KQ  P P+   H    +++GVRRRPWGRYAAEIR+P+TKER+WLGTFDTAE
Sbjct: 13  SRSKKSHRQKQQQPQPQPQQHIEEIKYVGVRRRPWGRYAAEIRNPTTKERYWLGTFDTAE 72

Query: 62  EAALAYDRAARSLRGSLARTNFLYSDSP 86
           EAALAYDRAARS+RG  ARTNF+YSD P
Sbjct: 73  EAALAYDRAARSIRGLTARTNFVYSDMP 100

[Close]

BLAST of MS018690 vs. TAIR 10
Match: AT5G18560.1 (Integrase-type DNA-binding superfamily protein )

HSP 1 Score: 113.6 bits (283), Expect = 2.0e-25
Identity = 52/60 (86.67%), Postives = 57/60 (95.00%), Query Frame = 0


Query: 23  RFLGVRRRPWGRYAAEIRDPSTKERHWLGTFDTAEEAALAYDRAARSLRGSLARTNFLYS 82
           RFLGVRRRPWGRYAAEIRDP+TKERHWLGTFDTA EAALAYDRAA S+RG+ ARTNF+Y+
Sbjct: 54  RFLGVRRRPWGRYAAEIRDPTTKERHWLGTFDTAHEAALAYDRAALSMRGTQARTNFVYT 113

[Close]

BLAST of MS018690 vs. TAIR 10
Match: AT1G12890.1 (Integrase-type DNA-binding superfamily protein )

HSP 1 Score: 103.2 bits (256), Expect = 2.7e-22
Identity = 55/84 (65.48%), Postives = 64/84 (76.19%), Query Frame = 0


Query: 1  MSPSPSKPKRKQPPPTPETASHRFLGVRRRPWGRYAAEIRDPSTKERHWLGTFDTAEEAA 60
          M  S +K K K+     E    ++LGVRRRPWGRYAAEIR+P TKERHWLGTFDTAEEAA
Sbjct: 1  MLKSSNKRKSKEEKKLQE---GKYLGVRRRPWGRYAAEIRNPFTKERHWLGTFDTAEEAA 60

Query: 61 LAYDRAARSLRGSLARTNFLYSDS 85
           AYD AARS+ GSLA TNF Y+++
Sbjct: 61 FAYDVAARSISGSLATTNFFYTEN 81

[Close]

BLAST of MS018690 vs. TAIR 10
Match: AT1G24590.1 (DORNROSCHEN-like )

HSP 1 Score: 99.8 bits (247), Expect = 3.0e-21
Identity = 52/82 (63.41%), Postives = 60/82 (73.17%), Query Frame = 0


Query: 23  RFLGVRRRPWGRYAAEIRDPSTKERHWLGTFDTAEEAALAYDRAARSLRGSLARTNFLYS 82
           R+ GVRRRPWGRYAAEIRDP +KER WLGTFDTAEEAA AYD AAR++RG  ARTNF+Y 
Sbjct: 57  RYRGVRRRPWGRYAAEIRDPLSKERRWLGTFDTAEEAACAYDCAARAMRGLKARTNFVY- 116

Query: 83  DSPPPLPPSAAVSHGQLPPPPL 105
               P+P   +  H     PP+
Sbjct: 117 ----PMPSLDSYHHRIFSSPPM 133

The following BLAST results are available for this feature:

BLAST of MS018690 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022141682.1	8.6e-119	98.65	ethylene-responsive transcription factor LEP [Momordica charantia]	[more]
KAA0066104.1	4.9e-74	70.80	ethylene-responsive transcription factor LEP [Cucumis melo var. makuwa] >TYK1514...	[more]
XP_022990620.1	2.4e-73	72.37	ethylene-responsive transcription factor LEP-like [Cucurbita maxima]	[more]
XP_023541749.1	2.7e-72	71.49	ethylene-responsive transcription factor LEP-like [Cucurbita pepo subsp. pepo]	[more]
XP_022963669.1	1.1e-70	69.40	ethylene-responsive transcription factor LEP-like [Cucurbita moschata] >KAG66019...	[more]

BLAST of MS018690 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9M644	3.6e-35	44.21	Ethylene-responsive transcription factor LEP OS=Arabidopsis thaliana OX=3702 GN=...	[more]
Q9FZ90	4.4e-25	67.05	Ethylene-responsive transcription factor ERF087 OS=Arabidopsis thaliana OX=3702 ...	[more]
Q6J9Q2	2.8e-24	86.67	Ethylene-responsive transcription factor ERF086 OS=Arabidopsis thaliana OX=3702 ...	[more]
Q8H3Q1	4.9e-24	60.61	Ethylene-responsive transcription factor FZP OS=Oryza sativa subsp. japonica OX=...	[more]
Q3E703	3.9e-21	65.48	Ethylene-responsive transcription factor ERF088 OS=Arabidopsis thaliana OX=3702 ...	[more]

BLAST of MS018690 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1CKI8	4.2e-119	98.65	ethylene-responsive transcription factor LEP OS=Momordica charantia OX=3673 GN=L...	[more]
A0A5A7VFL7	2.4e-74	70.80	Ethylene-responsive transcription factor LEP OS=Cucumis melo var. makuwa OX=1194...	[more]
A0A6J1JQK9	1.2e-73	72.37	ethylene-responsive transcription factor LEP-like OS=Cucurbita maxima OX=3661 GN...	[more]
A0A6J1HKV8	5.5e-71	69.40	ethylene-responsive transcription factor LEP-like OS=Cucurbita moschata OX=3662 ...	[more]
A0A1S3AU89	1.8e-69	67.87	ethylene-responsive transcription factor LEP OS=Cucumis melo OX=3656 GN=LOC10348...	[more]

BLAST of MS018690 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G13910.1	2.5e-36	44.21	Integrase-type DNA-binding superfamily protein	[more]
AT1G28160.1	3.1e-26	67.05	Integrase-type DNA-binding superfamily protein	[more]
AT5G18560.1	2.0e-25	86.67	Integrase-type DNA-binding superfamily protein	[more]
AT1G12890.1	2.7e-22	65.48	Integrase-type DNA-binding superfamily protein	[more]
AT1G24590.1	3.0e-21	63.41	DORNROSCHEN-like	[more]

InterPro

Analysis Name: InterPro Annotations of Bitter gourd (TR) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001471	AP2/ERF domain	PRINTS	PR00367	ETHRSPELEMNT	coord: 46..62 score: 69.2 coord: 24..35 score: 53.33
IPR001471	AP2/ERF domain	SMART	SM00380	rav1_2	coord: 23..86 e-value: 3.1E-34 score: 129.7
IPR001471	AP2/ERF domain	PFAM	PF00847	AP2	coord: 26..72 e-value: 4.1E-13 score: 49.4
IPR001471	AP2/ERF domain	PROSITE	PS51032	AP2_ERF	coord: 23..80 score: 20.573601
IPR001471	AP2/ERF domain	CDD	cd00018	AP2	coord: 23..79 e-value: 4.58676E-30 score: 104.276
IPR036955	AP2/ERF domain superfamily	GENE3D	3.30.730.10	AP2/ERF domain	coord: 22..81 e-value: 9.1E-25 score: 88.6
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..25
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..15
None	No IPR available	PANTHER	PTHR31677	AP2 DOMAIN CLASS TRANSCRIPTION FACTOR	coord: 10..87
None	No IPR available	PANTHER	PTHR31677:SF118	ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR LEP	coord: 140..216
None	No IPR available	PANTHER	PTHR31677:SF118	ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR LEP	coord: 10..87
None	No IPR available	PANTHER	PTHR31677	AP2 DOMAIN CLASS TRANSCRIPTION FACTOR	coord: 140..216
IPR016177	DNA-binding domain superfamily	SUPERFAMILY	54171	DNA-binding domain	coord: 24..81

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
MS018690.1	MS018690.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006355	regulation of transcription, DNA-templated
molecular_function	GO:0003677	DNA binding
molecular_function	GO:0003700	DNA-binding transcription factor activity