MS018688 (gene) Bitter gourd (TR) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.GAATTTTCAGGTGTTTTGAGAATAGAAATTGACCCACTACAGCCAAAAGTGAGCATTTTTGGTAATGTTGACCCCCAAATTCTCATAAAGAAGCTTCATAAAGCTGGAAAACAAGCACAAATTTGGAGCCAAGGCAATAACAATTTCAATCAAATTAATTAC GAATTTTCAGGTGTTTTGAGAATAGAAATTGACCCACTACAGCCAAAAGTGAGCATTTTTGGTAATGTTGACCCCCAAATTCTCATAAAGAAGCTTCATAAAGCTGGAAAACAAGCACAAATTTGGAGCCAAGGCAATAACAATTTCAATCAAATTAATTAC GAATTTTCAGGTGTTTTGAGAATAGAAATTGACCCACTACAGCCAAAAGTGAGCATTTTTGGTAATGTTGACCCCCAAATTCTCATAAAGAAGCTTCATAAAGCTGGAAAACAAGCACAAATTTGGAGCCAAGGCAATAACAATTTCAATCAAATTAATTAC EFSGVLRIEIDPLQPKVSIFGNVDPQILIKKLHKAGKQAQIWSQGNNNFNQINY Homology
BLAST of MS018688 vs. NCBI nr
Match: XP_034708189.1 (heavy metal-associated isoprenylated plant protein 32-like [Vitis riparia]) HSP 1 Score: 77.0 bits (188), Expect = 5.5e-11 Identity = 35/50 (70.00%), Postives = 41/50 (82.00%), Query Frame = 0
BLAST of MS018688 vs. NCBI nr
Match: RVW45064.1 (Heavy metal-associated isoprenylated plant protein 32 [Vitis vinifera]) HSP 1 Score: 75.9 bits (185), Expect = 1.2e-10 Identity = 34/50 (68.00%), Postives = 41/50 (82.00%), Query Frame = 0
BLAST of MS018688 vs. NCBI nr
Match: XP_010660640.1 (PREDICTED: heavy metal-associated isoprenylated plant protein 32 [Vitis vinifera] >CBI21235.3 unnamed protein product, partial [Vitis vinifera]) HSP 1 Score: 75.9 bits (185), Expect = 1.2e-10 Identity = 34/50 (68.00%), Postives = 41/50 (82.00%), Query Frame = 0
BLAST of MS018688 vs. NCBI nr
Match: XP_021657893.1 (heavy metal-associated isoprenylated plant protein 35-like [Hevea brasiliensis] >KAF2323011.1 hypothetical protein GH714_032740 [Hevea brasiliensis]) HSP 1 Score: 75.5 bits (184), Expect = 1.6e-10 Identity = 33/45 (73.33%), Postives = 41/45 (91.11%), Query Frame = 0
BLAST of MS018688 vs. NCBI nr
Match: XP_031288240.1 (heavy metal-associated isoprenylated plant protein 35-like [Pistacia vera]) HSP 1 Score: 75.1 bits (183), Expect = 2.1e-10 Identity = 34/45 (75.56%), Postives = 39/45 (86.67%), Query Frame = 0
BLAST of MS018688 vs. ExPASy Swiss-Prot
Match: Q9M8K5 (Heavy metal-associated isoprenylated plant protein 32 OS=Arabidopsis thaliana OX=3702 GN=HIPP32 PE=2 SV=1) HSP 1 Score: 57.0 bits (136), Expect = 7.7e-08 Identity = 28/53 (52.83%), Postives = 37/53 (69.81%), Query Frame = 0
BLAST of MS018688 vs. ExPASy Swiss-Prot
Match: Q84J88 (Heavy metal-associated isoprenylated plant protein 36 OS=Arabidopsis thaliana OX=3702 GN=HIPP36 PE=1 SV=1) HSP 1 Score: 55.1 bits (131), Expect = 2.9e-07 Identity = 27/56 (48.21%), Postives = 36/56 (64.29%), Query Frame = 0
BLAST of MS018688 vs. ExPASy Swiss-Prot
Match: F4JZL7 (Heavy metal-associated isoprenylated plant protein 33 OS=Arabidopsis thaliana OX=3702 GN=HIPP33 PE=2 SV=1) HSP 1 Score: 53.5 bits (127), Expect = 8.5e-07 Identity = 28/57 (49.12%), Postives = 35/57 (61.40%), Query Frame = 0
BLAST of MS018688 vs. ExPASy Swiss-Prot
Match: Q9C7J6 (Heavy metal-associated isoprenylated plant protein 35 OS=Arabidopsis thaliana OX=3702 GN=HIPP35 PE=2 SV=1) HSP 1 Score: 46.6 bits (109), Expect = 1.0e-04 Identity = 19/37 (51.35%), Postives = 29/37 (78.38%), Query Frame = 0
BLAST of MS018688 vs. ExPASy Swiss-Prot
Match: Q0WV37 (Heavy metal-associated isoprenylated plant protein 34 OS=Arabidopsis thaliana OX=3702 GN=HIPP34 PE=2 SV=1) HSP 1 Score: 45.8 bits (107), Expect = 1.8e-04 Identity = 19/45 (42.22%), Postives = 30/45 (66.67%), Query Frame = 0
BLAST of MS018688 vs. ExPASy TrEMBL
Match: D7SVD6 (HMA domain-containing protein OS=Vitis vinifera OX=29760 GN=VIT_14s0068g00670 PE=4 SV=1) HSP 1 Score: 75.9 bits (185), Expect = 5.9e-11 Identity = 34/50 (68.00%), Postives = 41/50 (82.00%), Query Frame = 0
BLAST of MS018688 vs. ExPASy TrEMBL
Match: A0A438EBL1 (Heavy metal-associated isoprenylated plant protein 32 OS=Vitis vinifera OX=29760 GN=HIPP32_5 PE=4 SV=1) HSP 1 Score: 75.9 bits (185), Expect = 5.9e-11 Identity = 34/50 (68.00%), Postives = 41/50 (82.00%), Query Frame = 0
BLAST of MS018688 vs. ExPASy TrEMBL
Match: A0A2C9W147 (Uncharacterized protein OS=Manihot esculenta OX=3983 GN=MANES_04G096100 PE=4 SV=1) HSP 1 Score: 75.9 bits (185), Expect = 5.9e-11 Identity = 34/46 (73.91%), Postives = 41/46 (89.13%), Query Frame = 0
BLAST of MS018688 vs. ExPASy TrEMBL
Match: A0A6A6NA12 (HMA domain-containing protein OS=Hevea brasiliensis OX=3981 GN=GH714_032740 PE=4 SV=1) HSP 1 Score: 75.5 bits (184), Expect = 7.7e-11 Identity = 33/45 (73.33%), Postives = 41/45 (91.11%), Query Frame = 0
BLAST of MS018688 vs. ExPASy TrEMBL
Match: W9QM72 (HMA domain-containing protein OS=Morus notabilis OX=981085 GN=L484_007580 PE=4 SV=1) HSP 1 Score: 75.1 bits (183), Expect = 1.0e-10 Identity = 34/44 (77.27%), Postives = 39/44 (88.64%), Query Frame = 0
BLAST of MS018688 vs. TAIR 10
Match: AT3G06130.1 (Heavy metal transport/detoxification superfamily protein ) HSP 1 Score: 57.0 bits (136), Expect = 5.4e-09 Identity = 28/53 (52.83%), Postives = 37/53 (69.81%), Query Frame = 0
BLAST of MS018688 vs. TAIR 10
Match: AT3G06130.2 (Heavy metal transport/detoxification superfamily protein ) HSP 1 Score: 57.0 bits (136), Expect = 5.4e-09 Identity = 28/53 (52.83%), Postives = 37/53 (69.81%), Query Frame = 0
BLAST of MS018688 vs. TAIR 10
Match: AT5G27690.1 (Heavy metal transport/detoxification superfamily protein ) HSP 1 Score: 55.1 bits (131), Expect = 2.1e-08 Identity = 27/56 (48.21%), Postives = 36/56 (64.29%), Query Frame = 0
BLAST of MS018688 vs. TAIR 10
Match: AT5G19090.1 (Heavy metal transport/detoxification superfamily protein ) HSP 1 Score: 53.5 bits (127), Expect = 6.0e-08 Identity = 28/57 (49.12%), Postives = 35/57 (61.40%), Query Frame = 0
BLAST of MS018688 vs. TAIR 10
Match: AT5G19090.2 (Heavy metal transport/detoxification superfamily protein ) HSP 1 Score: 53.5 bits (127), Expect = 6.0e-08 Identity = 28/57 (49.12%), Postives = 35/57 (61.40%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Bitter gourd (TR) v1
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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