MS018678 (gene) Bitter gourd (TR) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.ATGAGCAAAGTTTCCATTATCATATACATTACAGTAGCCTTACTTCTTCTCCTACTCGTTTCCCATTCCCCCAAGAAAACCCCAAATCACCGCCACCGCCGCCTCAAGCTTCGCTCCAATTTCACTTTTGCCCCCTCGCATCAGCACCGCGAGGCTATCCCACTCGACCCTCTCGTCGCCGACATTGAGCGCCGCCGTGAGGACCGGCAATGGGAGAAGCAATATGTGGAACATCACCATCCTGAGGTGGCCGCCCATTTGACGGAACCGGCCCCTGGTGAAGAGTCGCAGCCCGAGTGGGAGGACTTCGCGGATGCTGAGGATTATCTCAATGATGATAATAGGTTCAATGTGACTGATCGGCTGTCGTTGCTGTTTCCGAAGATTGATGTTCATCCAGCTGATGGGTTTGTCGATGTGGATGAGTTGACTGAGTGGAATCTGCAGCAGGCTGAGAGGGAAACTTTGCATAGGACTCAGAGGGAGATGGAGACGCACGATAAGAATCATGATGGGCTTGTTTCGTTTTCGGAGTACGAGCCTCCCAGCTGGATTCGAAATTCAGGTCTAATCTCCTTTAAGTGCATTTTGATTTTAGTTTTGTGTACTTGAAATTGGTGAGTCTGATGTTTTTCGTTTATTTTTCTTGTCGTGTTCAAAATCTTGCTCGTTGGAAATTGTTATTACTTATTTAGAAACTCGATATGTTGTATATTTAACAATCTCAAGGACCAAGAGTCGGGAATATTCTAAGATCGATTTCTTAAGGAAAAAGTATTTTGATAAAAACGAAATGTAATTTGCCGCACTTATGATGTTGTATGTAGATTCGTTGCAGTTGATGTTGTATGTAGATTCGTTGCAGTTTTTCCATTTGTCTTATGTTTGCTTTTTGGACACTTATTTTCTGTGTTACTCATTACCAAACTATTCACCAGATAATAGTTCCTTTGGCTACGATATGGGTTGGTGGAAACTTGGACATTTTAACGCGTCCGATGCTGATGGAGATGGTTTTTTGAATTTGACTGAGTTCAATGAGTAAGCTTTTCAAGATTTGTTGTGGTTATTCTTGAGGAGAATATGGAAAGTTTATTGGGTAGTTGAATTGAGATGCTCATAACGTTTATTCATCTCTGTTTTTTTAGCTTTCTGCACCCTGCTGACACCAAGAACCCAAAGCTACTTCATTGGCTGTGTGAGGAAGAAATACGGTAATGAATTATATGAAGTTATGTTCTTAACAGTTCTCAAAATCCTGCTTGATGTTTTAGGTGCATTTCCATTGGTTTCTATGGCTTTGTTTCCACTGCATTTGTCTTATAACGTTCAGTTGCCTAGTTGTTCTTCATCTCACCAATGGAGATTCTTGCTGAGGGCATTAACATCTTGTTTAACTGAAATAAACAAATTTTGGGGCAATTCTTATTTGCATAAACAATATTTTTGGGTTAATTCTTATTTCTGTAGATCTCAAAAACACCTTAACCTTTACACACTGCATTTGTACACATCTACTTATGTGTACAAAAGTGTTTACAAAAGCCTTTTGGAACAATTTTTTTTTCTTTTTTATAAGACCTTTTTGGAACTATTCAATCCAGGAAATTATTTTTGGGTCGAAGGTATTTTTGTAAAAAGGTGTTAGTTAGTATTGTTTTTATTTATGGGGTTACATTGTTATGTAAGTTCATAGAGAGATCGATATCTCGTGGTTTTGGAGTTTGTTACGTGTATAGTCTTTAATTTTTGGGTTTTACCTTGTAGGCTTGTTATAGGAGTTTGGTTTCGTGTAACTTTTCAAATATCAATGAAAAGTTTATGTTTATTGTCAAAAAGGGAAAAAAAAAAGTATTTTATACTCTTGTGCTGGCACAAGGGAAGATTGGATTGAACATTCAATTCTATAATATTCGGCTAAAATCACAACCGAAGAAGAGATGCTGTTATTATCCTCAACCTTCTTACAAAGGTATTTTTTTTGAACAAGATACGAACTTTTCATTGATATATGAAAAGGAACAAAATTGTTCAAAGATACAAACTCCCAACCTTCTTACAAAGGTATTAGCATCCCAAATACAAGAACCTAACAAGATAATTATATTGCAATCTCAAAAGATAAATTACAATATCGATAGCCTTTCGAGAGGGCTATCTCTCTCCCGAGAAACTCTCTCAAGTCCTCACCAAAATACTATTCCAAAAGATGATCTTCTCCTCTCCCTACTATCCTTATTTATAACAACTCACCCCTAACTAATTACCACATTGCCCCTTCACTAACATACTAACAATACATACCCCCATTAGGACTCTCACAAAAGGCTGCACATATTAGGGAAAATGTAAAGATGAGTATTCCTTCTTTGGACAACTTCAGCTATAATAAGGCCTCCTAGAGCTAAACTGCCAACAAAAATGTGACCTGTTAAGAAGCCTTGAATAATCTCCAAATTACTCGGTTTTAGTACTTTTTGGAAAAACTAGTTGGATATTTATAGCCTCATTAATTGTATAGATGAAAGATTTGGTGGAAAAGATGTCTGATGAATCTCCTTCCCTAATTCGAGAGTTTGCTTGGTAGGAAGGGTGGAAGTCTCTGAAGCACGAAATCAGCTGCAACCACTCTTCAATTTCTCTTTGGTTTAAGGCTCTTAAAAGTAAGGCATCCACTAGCATTCTTCTGCATCCCACTATCTCTACATTATTGTACATTTTTCAAGGAATTATCCCCGATTCGGACAGCTTCCCACTATTTAACTTGGTGCCATTTAATTTCCCGATAACAAACATATAAGATATCATTTAGAGGACAAAACTAGAGAAGAGGTTGATAAGAAATCAATCCATAAGTATTACTCTCATTTGTTCGAATGGGGATGTATTTATTTTCTCACCATAGTTTGTTTTTCTTCCTTTTCACTCTCTTTGGAGATACACCTTTGAAGTTTGTATTTTTGAACATTTTTTTTTGTTATTCATTGAATCAATGAAAAGTTCGTACTTGGTTAAAAATAAGAGAAGAAGAAAAAGAAATCAATCCATTAGTCAAAGAGCTCAATGGGGATTTCAAATAGCCTCTCCAATAGGTGTTGATAAAAAAAGGAATCGTCGCTACATAATAATTTAGCTGTTGCACTCCAAAAGGAAGCTTTGGCTTCCCAAATCTACTTCTCTCTTCTCTAGCCTTGTTAAGGAAATTTTATTTTTCTTTCAAGTCAGATCTCACAAATAGGAGCTTTGATCGTTTTCTCCCAAAGAATCTTGGCTTTTCTTTTCAAAAAGTTGGATCAAATATTGCTGACCTGTTAACTCGACTTCAGAGGGGATAGTTAGGTTACATTTCATAACCCTTCCGGAGTTCGGTTACTTCAACAAGGGAGACCCTTTTCTCTGTAACTTTCTGTAGCCGCACAACTCCTTCAATTCTAGTCTTCCTAAAGAGTTTCTGGTGTATTTGACTTCAAATTAGGATTTCAATTGCCTTTTATGTTCCCTGCATTTAGTCCAAGTCAAAAGCAAGGTGAAAGAACAACCAATTATTTTTTTCTTCAATTTTCTCTTCTAAATATTTGATCCTCACACAATTTTGTTGAAAAGAACTCCCTATATATTCTGCATTCCTCATGTTCATGTGAGAAACTCGATCCCCTTCCTAGTCGGAGAAGTCATTGAAGGTCTTGCTAGTCAGGTAGCATTTAAGAGAGATAATATTTAAAGCATCGTTAAATGTTACCTCATACCTGAACGATCAGGGAGATTCGGGAGGTGTTGTTGGAGAGAAATCTGAACTTTTGGGATAAGCATGTAATTTTGAACTACTATATTTAGTGGCTTTCTTTTTTAGGAATATTATTCATGAATGTAACAGAGTTGATGTGGTCAATTTTGATTTGTTTTAGCACTGCATTTCCAAAGTTTATTCTCATCAATATAAACGGATTTGCGATGTGGCTATGTCTCCATTTTTGTATCTGTTCAGGATATAATTTTCAATATTCCTTTTAATGTTTTTAATATATTAAAAATAATTATAGATTAGATTTTATGTTTTTACAAAAATTAGTGATATATAAAAGGTCATATTCTTATATGTTGTTTCAATTTGTTGATTAGCATAAACATATTGTACAAAATTAATATATTATATACTAAAACCATTAATTGCGTTCTTTATACATGCATGTTGAAATATATGTATGTATGTGTTAAGACACAATATAATAGTCAGAAGGAATATACAACATCAGAGGGGAGGTGGAAAAAAATCCACAAAAGCCATAATCCAAAGGTGAATACCAAAACGGTCTCCCCATTTGGTATAAAGCCAGAAAGGGAGTAAATACAAAGATGTTTGGACAAGGAAATTGAACAAGAGGCTAAGAAACAACCTGAATCAGAGATTTTTTTTTTTTTTTCCCTAGTTCAACGACATATGAGGGTGGAGATTTGAACCTCCAAACTTTTAGTCGAGGATATATGCTTTAACCAGTTAAGTTATGCTCAAGTTGGCAACTTGAATCAAAACTCTTATTAACTCCACTACTTTTGTCCTCAAATATTGTACTTTTTCTCTCAAAGTAAATCTCTAAAGAAAAAAGCCTCTGATGGTTTTGCACCCAGTAACTATAGCTCTACTGGAGAAAACTGGCCAAATCAGTACCTTAGAGATGATACAGTTACACTTGTGAAGCAAAATTTTTTAAACAAATACCATATTTTTTTGAAAGTGGACAGTGAAGAACAGGTGTTCTAGACTTCCAATATGGTTGGGTTGAAGCTCAAAAGCACACCAGTTAAGATGTAGGCATAGTGGCATACAAGCATTGGGGAGCTTTATATGCTCTCTATTAATATCCACAAGAAAAAATTAACCTTAAGAGTATTTGTTTTTACTTTTTCCTAGCCATCTTTGTAGCTCTACTAGAGATCTCTAGATTCTAGGAACTAGGAAGTTGAGAAGGGACTTTGTAGTAAATTTCTAGAAGAATTGGGAGTCATATAGTCTGATGTTACTGTCTATCATTGGGCCTAAAATCTTCCACTACTTGGAGAGGAGATCCCATTCTACGATAAGAAGCACGGACACTTTAGTTTGGGTAGACACTTGGACACTTATCTCTCAATAGATGTGTGTCACACACAAGTTATACAAAGTGAATATGGATCCAATACTTGTTAGGCACATATTAGACACATGTTAAACATAAGAAATAGACATAAGTAGTAATATAAGGACAACGTAATAATTTTTTGCGAGCAAAATACATCAAACTCATTTTCTAAGCACGAAAATGCATAAGTTTGTTGACTTTGATATCCTTTTGGTATAAAAATGATATATACTTACGAACATGGTATATTCTAATAAACACATCCTTGTCGTATCCGTGTCCTAGATTTTTAGAAAATGATGTGTCACCTTGTCCGTATCGCACCCGTGTCTCGTGTCCATATATGTTTTCGTGATTCTTAGACTCTGTGAGAAATAAATATTATAATCTTATTGTATGTGATGGGTATTTTGTTATCATAAGTAAATTTAATACCACTCTCGAGAAGATTTTATGATGGAAATATCAAATATATTAAGATCCCAAATATACTCTTTGGATCTCTCCATCCTCCAAAAATTCTATTGTTTCTGCGAGCCATATTCCCCATAAAGTAGGGGTCTCTCATTTCAGTAGCTTTGCTAACTAGTTAATTGGTGAGTTGCCTTGTAGGGAGAGAGATTCAGACAAGGATGGGAAGATCAACTTCAATGAGTTTTTCCATGGACTCTTTGACTTGGTGAGAAATTATGATGAGAATCACCACTCTTCACATGAGTCAGATGATCCGAGGGATGGCCCTGCTAGGAATTTGTTTGCGGTGCTAGACAAAGATAACGACGGGTAATTTAAGTTTATGATGAGGTCAACGTCATACTTGGTTAACTGCAGAGTTTCTTGGCACCTTTAATGATTTGTTTTCGTTATTTTGTTTTTCATAGGCACCTGTCCGATGAAGAGTTGTTACCTATAATTGGAAAAATCCACCCATCAGAGCATTACTATGCGAAACAGCAAGCAGAATATATCGTACAGCAG ATGAGCAAAGTTTCCATTATCATATACATTACAGTAGCCTTACTTCTTCTCCTACTCGTTTCCCATTCCCCCAAGAAAACCCCAAATCACCGCCACCGCCGCCTCAAGCTTCGCTCCAATTTCACTTTTGCCCCCTCGCATCAGCACCGCGAGGCTATCCCACTCGACCCTCTCGTCGCCGACATTGAGCGCCGCCGTGAGGACCGGCAATGGGAGAAGCAATATGTGGAACATCACCATCCTGAGGTGGCCGCCCATTTGACGGAACCGGCCCCTGGTGAAGAGTCGCAGCCCGAGTGGGAGGACTTCGCGGATGCTGAGGATTATCTCAATGATGATAATAGGTTCAATGTGACTGATCGGCTGTCGTTGCTGTTTCCGAAGATTGATGTTCATCCAGCTGATGGGTTTGTCGATGTGGATGAGTTGACTGAGTGGAATCTGCAGCAGGCTGAGAGGGAAACTTTGCATAGGACTCAGAGGGAGATGGAGACGCACGATAAGAATCATGATGGGCTTGTTTCGTTTTCGGAGTACGAGCCTCCCAGCTGGATTCGAAATTCAGATAATAGTTCCTTTGGCTACGATATGGGTTGGTGGAAACTTGGACATTTTAACGCGTCCGATGCTGATGGAGATGGTTTTTTGAATTTGACTGAGTTCAATGACTTTCTGCACCCTGCTGACACCAAGAACCCAAAGCTACTTCATTGGCTGTGTGAGGAAGAAATACGGGAGAGAGATTCAGACAAGGATGGGAAGATCAACTTCAATGAGTTTTTCCATGGACTCTTTGACTTGGTGAGAAATTATGATGAGAATCACCACTCTTCACATGAGTCAGATGATCCGAGGGATGGCCCTGCTAGGAATTTGTTTGCGGTGCTAGACAAAGATAACGACGGGCACCTGTCCGATGAAGAGTTGTTACCTATAATTGGAAAAATCCACCCATCAGAGCATTACTATGCGAAACAGCAAGCAGAATATATCGTACAGCAG ATGAGCAAAGTTTCCATTATCATATACATTACAGTAGCCTTACTTCTTCTCCTACTCGTTTCCCATTCCCCCAAGAAAACCCCAAATCACCGCCACCGCCGCCTCAAGCTTCGCTCCAATTTCACTTTTGCCCCCTCGCATCAGCACCGCGAGGCTATCCCACTCGACCCTCTCGTCGCCGACATTGAGCGCCGCCGTGAGGACCGGCAATGGGAGAAGCAATATGTGGAACATCACCATCCTGAGGTGGCCGCCCATTTGACGGAACCGGCCCCTGGTGAAGAGTCGCAGCCCGAGTGGGAGGACTTCGCGGATGCTGAGGATTATCTCAATGATGATAATAGGTTCAATGTGACTGATCGGCTGTCGTTGCTGTTTCCGAAGATTGATGTTCATCCAGCTGATGGGTTTGTCGATGTGGATGAGTTGACTGAGTGGAATCTGCAGCAGGCTGAGAGGGAAACTTTGCATAGGACTCAGAGGGAGATGGAGACGCACGATAAGAATCATGATGGGCTTGTTTCGTTTTCGGAGTACGAGCCTCCCAGCTGGATTCGAAATTCAGATAATAGTTCCTTTGGCTACGATATGGGTTGGTGGAAACTTGGACATTTTAACGCGTCCGATGCTGATGGAGATGGTTTTTTGAATTTGACTGAGTTCAATGACTTTCTGCACCCTGCTGACACCAAGAACCCAAAGCTACTTCATTGGCTGTGTGAGGAAGAAATACGGGAGAGAGATTCAGACAAGGATGGGAAGATCAACTTCAATGAGTTTTTCCATGGACTCTTTGACTTGGTGAGAAATTATGATGAGAATCACCACTCTTCACATGAGTCAGATGATCCGAGGGATGGCCCTGCTAGGAATTTGTTTGCGGTGCTAGACAAAGATAACGACGGGCACCTGTCCGATGAAGAGTTGTTACCTATAATTGGAAAAATCCACCCATCAGAGCATTACTATGCGAAACAGCAAGCAGAATATATCGTACAGCAG MSKVSIIIYITVALLLLLLVSHSPKKTPNHRHRRLKLRSNFTFAPSHQHREAIPLDPLVADIERRREDRQWEKQYVEHHHPEVAAHLTEPAPGEESQPEWEDFADAEDYLNDDNRFNVTDRLSLLFPKIDVHPADGFVDVDELTEWNLQQAERETLHRTQREMETHDKNHDGLVSFSEYEPPSWIRNSDNSSFGYDMGWWKLGHFNASDADGDGFLNLTEFNDFLHPADTKNPKLLHWLCEEEIRERDSDKDGKINFNEFFHGLFDLVRNYDENHHSSHESDDPRDGPARNLFAVLDKDNDGHLSDEELLPIIGKIHPSEHYYAKQQAEYIVQQ Homology
BLAST of MS018678 vs. NCBI nr
Match: XP_022141578.1 (calumenin-like [Momordica charantia] >XP_022141579.1 calumenin-like [Momordica charantia]) HSP 1 Score: 689.1 bits (1777), Expect = 1.9e-194 Identity = 333/334 (99.70%), Postives = 333/334 (99.70%), Query Frame = 0
BLAST of MS018678 vs. NCBI nr
Match: XP_022939873.1 (calumenin-like [Cucurbita moschata] >KAG6579084.1 Calumenin, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 631.7 bits (1628), Expect = 3.6e-177 Identity = 304/338 (89.94%), Postives = 321/338 (94.97%), Query Frame = 0
BLAST of MS018678 vs. NCBI nr
Match: KAG7016609.1 (Calumenin, partial [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 631.7 bits (1628), Expect = 3.6e-177 Identity = 304/338 (89.94%), Postives = 321/338 (94.97%), Query Frame = 0
BLAST of MS018678 vs. NCBI nr
Match: XP_023550368.1 (calumenin-like [Cucurbita pepo subsp. pepo] >XP_023550369.1 calumenin-like [Cucurbita pepo subsp. pepo]) HSP 1 Score: 629.0 bits (1621), Expect = 2.3e-176 Identity = 303/338 (89.64%), Postives = 320/338 (94.67%), Query Frame = 0
BLAST of MS018678 vs. NCBI nr
Match: XP_038876256.1 (calumenin-like [Benincasa hispida]) HSP 1 Score: 628.6 bits (1620), Expect = 3.0e-176 Identity = 298/334 (89.22%), Postives = 317/334 (94.91%), Query Frame = 0
BLAST of MS018678 vs. ExPASy Swiss-Prot
Match: Q6XLQ7 (Calumenin OS=Oryctolagus cuniculus OX=9986 GN=CALU PE=1 SV=2) HSP 1 Score: 70.5 bits (171), Expect = 4.1e-11 Identity = 71/270 (26.30%), Postives = 121/270 (44.81%), Query Frame = 0
BLAST of MS018678 vs. ExPASy Swiss-Prot
Match: O35887 (Calumenin OS=Mus musculus OX=10090 GN=Calu PE=1 SV=1) HSP 1 Score: 69.7 bits (169), Expect = 7.1e-11 Identity = 72/271 (26.57%), Postives = 125/271 (46.13%), Query Frame = 0
BLAST of MS018678 vs. ExPASy Swiss-Prot
Match: Q5RDD8 (Calumenin OS=Pongo abelii OX=9601 GN=CALU PE=2 SV=1) HSP 1 Score: 69.7 bits (169), Expect = 7.1e-11 Identity = 71/270 (26.30%), Postives = 120/270 (44.44%), Query Frame = 0
BLAST of MS018678 vs. ExPASy Swiss-Prot
Match: O43852 (Calumenin OS=Homo sapiens OX=9606 GN=CALU PE=1 SV=2) HSP 1 Score: 69.3 bits (168), Expect = 9.2e-11 Identity = 71/270 (26.30%), Postives = 120/270 (44.44%), Query Frame = 0
BLAST of MS018678 vs. ExPASy Swiss-Prot
Match: Q4U471 (Calumenin OS=Mesocricetus auratus OX=10036 GN=CALU PE=2 SV=1) HSP 1 Score: 67.0 bits (162), Expect = 4.6e-10 Identity = 71/271 (26.20%), Postives = 124/271 (45.76%), Query Frame = 0
BLAST of MS018678 vs. ExPASy TrEMBL
Match: A0A6J1CJ22 (calumenin-like OS=Momordica charantia OX=3673 GN=LOC111011909 PE=4 SV=1) HSP 1 Score: 689.1 bits (1777), Expect = 9.1e-195 Identity = 333/334 (99.70%), Postives = 333/334 (99.70%), Query Frame = 0
BLAST of MS018678 vs. ExPASy TrEMBL
Match: A0A6J1FMS7 (calumenin-like OS=Cucurbita moschata OX=3662 GN=LOC111445607 PE=4 SV=1) HSP 1 Score: 631.7 bits (1628), Expect = 1.7e-177 Identity = 304/338 (89.94%), Postives = 321/338 (94.97%), Query Frame = 0
BLAST of MS018678 vs. ExPASy TrEMBL
Match: A0A5D3CVB0 (Calumenin-B-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold790G00460 PE=4 SV=1) HSP 1 Score: 626.7 bits (1615), Expect = 5.5e-176 Identity = 298/334 (89.22%), Postives = 316/334 (94.61%), Query Frame = 0
BLAST of MS018678 vs. ExPASy TrEMBL
Match: A0A1S3CNB9 (calumenin-B-like OS=Cucumis melo OX=3656 GN=LOC103502856 PE=4 SV=1) HSP 1 Score: 626.7 bits (1615), Expect = 5.5e-176 Identity = 298/334 (89.22%), Postives = 316/334 (94.61%), Query Frame = 0
BLAST of MS018678 vs. ExPASy TrEMBL
Match: A0A6J1JYP4 (calumenin-like OS=Cucurbita maxima OX=3661 GN=LOC111489489 PE=4 SV=1) HSP 1 Score: 620.9 bits (1600), Expect = 3.0e-174 Identity = 298/338 (88.17%), Postives = 318/338 (94.08%), Query Frame = 0
BLAST of MS018678 vs. TAIR 10
Match: AT5G08580.1 (Calcium-binding EF hand family protein ) HSP 1 Score: 483.8 bits (1244), Expect = 1.1e-136 Identity = 234/351 (66.67%), Postives = 283/351 (80.63%), Query Frame = 0
BLAST of MS018678 vs. TAIR 10
Match: AT4G27790.1 (Calcium-binding EF hand family protein ) HSP 1 Score: 150.6 bits (379), Expect = 2.2e-36 Identity = 99/336 (29.46%), Postives = 164/336 (48.81%), Query Frame = 0
BLAST of MS018678 vs. TAIR 10
Match: AT3G59440.1 (Calcium-binding EF-hand family protein ) HSP 1 Score: 48.5 bits (114), Expect = 1.2e-05 Identity = 33/96 (34.38%), Postives = 45/96 (46.88%), Query Frame = 0
BLAST of MS018678 vs. TAIR 10
Match: AT2G43290.1 (Calcium-binding EF-hand family protein ) HSP 1 Score: 43.9 bits (102), Expect = 2.9e-04 Identity = 29/94 (30.85%), Postives = 43/94 (45.74%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Bitter gourd (TR) v1
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
|