MS018658 (gene) Bitter gourd (TR) v1

Overview


Name	MS018658
Type	gene
Organism	Momordica charantia cv. TR (Bitter gourd (TR) v1)
Description	Transcription initiation factor TFIID subunit 11-like
Location	scaffold313: 802087 .. 802686 (+)
RNA-Seq Expression	MS018658
Synteny	MS018658

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCGGAAACTACCAGTAGAGAGGAGACCACATTTGACGCCAAGCGTAAACCTGACCCCTGCTGCGAAGCAAAAGAGGAGCATTCGAACAAAATTCAAAAGCTCGAAGTGGTTAAGGACGAATCTTGCCATGATGTGAAGAAAAGTGAGAATGGAGACCATAAGCGGAGTGATGAACACATTGATGACGATTCTTTGGCTGCCGAAGGGAAAGACGGTGAAGTTGGAGCTGGTGTAGATGCGGGAGAAGCAGATGACGAGGAAGACGATGAGGAAGATTACGAGGATGAGAATGACGAAGAGGACGAAGAGGAAGACGCCAGTGAAGCAGTCGAGGATCGTAAGGGGAAGGGCATCGTGAAGGATGACAAAGGAAAAGGGAAATTGATAGAGGAAGACGACGACGACGACGACGAAGATTCCAGTGACGGTGGAAGCGAGTTGGGCTCTGAAGAGAGCGATTTGTCGGATGATCCGCTCGCGGAGGTCGATTTGGACAATATCCTTCCTTCAAGGACGCGGAGGCGGACGGTTCATCCTGGAGTTTATTTTGCTAAAGATCTGGGGAACGATGACGATGATAGCAGTGATAGCGATGCT

mRNA sequence

ATGGCGGAAACTACCAGTAGAGAGGAGACCACATTTGACGCCAAGCGTAAACCTGACCCCTGCTGCGAAGCAAAAGAGGAGCATTCGAACAAAATTCAAAAGCTCGAAGTGGTTAAGGACGAATCTTGCCATGATGTGAAGAAAAGTGAGAATGGAGACCATAAGCGGAGTGATGAACACATTGATGACGATTCTTTGGCTGCCGAAGGGAAAGACGGTGAAGTTGGAGCTGGTGTAGATGCGGGAGAAGCAGATGACGAGGAAGACGATGAGGAAGATTACGAGGATGAGAATGACGAAGAGGACGAAGAGGAAGACGCCAGTGAAGCAGTCGAGGATCGTAAGGGGAAGGGCATCGTGAAGGATGACAAAGGAAAAGGGAAATTGATAGAGGAAGACGACGACGACGACGACGAAGATTCCAGTGACGGTGGAAGCGAGTTGGGCTCTGAAGAGAGCGATTTGTCGGATGATCCGCTCGCGGAGGTCGATTTGGACAATATCCTTCCTTCAAGGACGCGGAGGCGGACGGTTCATCCTGGAGTTTATTTTGCTAAAGATCTGGGGAACGATGACGATGATAGCAGTGATAGCGATGCT

Coding sequence (CDS)

ATGGCGGAAACTACCAGTAGAGAGGAGACCACATTTGACGCCAAGCGTAAACCTGACCCCTGCTGCGAAGCAAAAGAGGAGCATTCGAACAAAATTCAAAAGCTCGAAGTGGTTAAGGACGAATCTTGCCATGATGTGAAGAAAAGTGAGAATGGAGACCATAAGCGGAGTGATGAACACATTGATGACGATTCTTTGGCTGCCGAAGGGAAAGACGGTGAAGTTGGAGCTGGTGTAGATGCGGGAGAAGCAGATGACGAGGAAGACGATGAGGAAGATTACGAGGATGAGAATGACGAAGAGGACGAAGAGGAAGACGCCAGTGAAGCAGTCGAGGATCGTAAGGGGAAGGGCATCGTGAAGGATGACAAAGGAAAAGGGAAATTGATAGAGGAAGACGACGACGACGACGACGAAGATTCCAGTGACGGTGGAAGCGAGTTGGGCTCTGAAGAGAGCGATTTGTCGGATGATCCGCTCGCGGAGGTCGATTTGGACAATATCCTTCCTTCAAGGACGCGGAGGCGGACGGTTCATCCTGGAGTTTATTTTGCTAAAGATCTGGGGAACGATGACGATGATAGCAGTGATAGCGATGCT

Protein sequence

MAETTSREETTFDAKRKPDPCCEAKEEHSNKIQKLEVVKDESCHDVKKSENGDHKRSDEHIDDDSLAAEGKDGEVGAGVDAGEADDEEDDEEDYEDENDEEDEEEDASEAVEDRKGKGIVKDDKGKGKLIEEDDDDDDEDSSDGGSELGSEESDLSDDPLAEVDLDNILPSRTRRRTVHPGVYFAKDLGNDDDDSSDSDA

Homology

[Close]

BLAST of MS018658 vs. NCBI nr
Match: XP_022141363.1 (prothymosin alpha-B [Momordica charantia])

HSP 1 Score: 354.0 bits (907), Expect = 8.6e-94
Identity = 198/200 (99.00%), Postives = 198/200 (99.00%), Query Frame = 0


Query: 1   MAETTSREETTFDAKRKPDPCCEAKEEHSNKIQKLEVVKDESCHDVKKSENGDHKRSDEH 60
           MAETTSREETTFDAKRKPDPCCEAKEEHSNKIQKLEVVKDESCHDVKKSENGDHKRSDEH
Sbjct: 1   MAETTSREETTFDAKRKPDPCCEAKEEHSNKIQKLEVVKDESCHDVKKSENGDHKRSDEH 60

Query: 61  IDDDSLAAEGKDGEVGAGVDAGEADDEEDDEEDYEDENDEEDEEEDASEAVEDRKGKGIV 120
           IDDDSLAAEGKDGEVGAGVDAGEADDEEDDEEDYEDENDE DEEEDASEAVEDRKGKGIV
Sbjct: 61  IDDDSLAAEGKDGEVGAGVDAGEADDEEDDEEDYEDENDEVDEEEDASEAVEDRKGKGIV 120

Query: 121 KDDKGKGKLIEEDDDDDDEDSSDGGSELGSEESDLSDDPLAEVDLDNILPSRTRRRTVHP 180
           KDDKGKGKLIEEDDDDDDEDSSDGGSELGSEESDLSDDPL EVDLDNILPSRTRRRTVHP
Sbjct: 121 KDDKGKGKLIEEDDDDDDEDSSDGGSELGSEESDLSDDPLTEVDLDNILPSRTRRRTVHP 180

Query: 181 GVYFAKDLGNDDDDSSDSDA 201
           GVYFAKDLGNDDDDSSDSDA
Sbjct: 181 GVYFAKDLGNDDDDSSDSDA 200

[Close]

BLAST of MS018658 vs. NCBI nr
Match: XP_022992871.1 (nucleolin-like [Cucurbita maxima] >XP_022992872.1 nucleolin-like [Cucurbita maxima] >XP_022992873.1 nucleolin-like [Cucurbita maxima])

HSP 1 Score: 236.9 bits (603), Expect = 1.5e-58
Identity = 153/206 (74.27%), Postives = 170/206 (82.52%), Query Frame = 0


Query: 1   MAET-TSREETTFDAKRKP-DPCCEAKEEHSNKIQKLEVVKDESCHDVKKS-ENGDHKRS 60
           MAET +SREET FDAKRKP DPCCEAKEE SNKIQKLEVV+ E C+DVKK+ +NGDHK+ 
Sbjct: 1   MAETASSREETAFDAKRKPADPCCEAKEERSNKIQKLEVVEGEPCNDVKKNGDNGDHKQG 60

Query: 61  DEHIDDDSLAAEGK-DGEVGAGVDAGEADDEEDDEEDYEDENDEEDEEEDASEAVEDRKG 120
           DE ID  S AAEGK DG   A VDAG      ++ EDY DE+D E+ E+ + +A +DRKG
Sbjct: 61  DEQIDSISSAAEGKDDGVFAADVDAG------NEGEDYNDEDDCENGEKSSGKAAKDRKG 120

Query: 121 KGIVKDDKGKGKLIEE--DDDDDDEDSSDGGSELGSEESDLSDDPLAEVDLDNILPSRTR 180
           KGI+KDDKGKGKLIEE  DDDDDDEDSSD GSE  +EESDLSDDPLAEVDLDNILPSRTR
Sbjct: 121 KGIMKDDKGKGKLIEEDDDDDDDDEDSSDDGSEFDNEESDLSDDPLAEVDLDNILPSRTR 180

Query: 181 RRTVHPGVYFAKDLGNDDDDSSDSDA 201
           RRTVHPGVYFA DLGN+DDDSSDSDA
Sbjct: 181 RRTVHPGVYFATDLGNEDDDSSDSDA 200

[Close]

BLAST of MS018658 vs. NCBI nr
Match: XP_022939215.1 (prostatic spermine-binding protein isoform X2 [Cucurbita moschata] >XP_022939216.1 prostatic spermine-binding protein isoform X2 [Cucurbita moschata] >XP_022939218.1 prostatic spermine-binding protein isoform X2 [Cucurbita moschata] >XP_022939219.1 prostatic spermine-binding protein isoform X2 [Cucurbita moschata] >XP_022939220.1 prostatic spermine-binding protein isoform X2 [Cucurbita moschata] >KAG6579069.1 hypothetical protein SDJN03_23517, partial [Cucurbita argyrosperma subsp. sororia] >KAG7016595.1 hypothetical protein SDJN02_21705, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 235.7 bits (600), Expect = 3.4e-58
Identity = 151/205 (73.66%), Postives = 170/205 (82.93%), Query Frame = 0


Query: 1   MAET-TSREETTFDAKRKP-DPCCEAKEEHSNKIQKLEVVKDESCHDVKKS-ENGDHKRS 60
           MAET +SREET FDAKRKP DPCCEAKEE SNKIQKLEVV+ E C+DVKK+ +NGDHK+ 
Sbjct: 1   MAETASSREETAFDAKRKPADPCCEAKEERSNKIQKLEVVEGEPCNDVKKNGDNGDHKQG 60

Query: 61  DEHIDDDSLAAEGK-DGEVGAGVDAGEADDEEDDEEDYEDENDEEDEEEDASEAVEDRKG 120
           D+ ID+ S AAEGK DG + A VDAG+  +++DDE+D E+      E+     A EDRKG
Sbjct: 61  DDQIDNISSAAEGKDDGVLAADVDAGDEGEDDDDEDDCEN-----GEKSSGKAAKEDRKG 120

Query: 121 KGIVKDDKGKGKLIEE-DDDDDDEDSSDGGSELGSEESDLSDDPLAEVDLDNILPSRTRR 180
           KGI+KDDKGKGKLIEE DDDDDDEDSSD GSE  +EESDLSDDPLAEVDLDNILPSRTRR
Sbjct: 121 KGIMKDDKGKGKLIEEDDDDDDDEDSSDDGSEFDNEESDLSDDPLAEVDLDNILPSRTRR 180

Query: 181 RTVHPGVYFAKDLGNDDDDSSDSDA 201
           RTVHPGVYFA DLGN+DDDSSDSDA
Sbjct: 181 RTVHPGVYFATDLGNEDDDSSDSDA 200

[Close]

BLAST of MS018658 vs. NCBI nr
Match: XP_023551083.1 (nucleolin-like [Cucurbita pepo subsp. pepo] >XP_023551084.1 nucleolin-like [Cucurbita pepo subsp. pepo] >XP_023551085.1 nucleolin-like [Cucurbita pepo subsp. pepo] >XP_023551086.1 nucleolin-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 235.0 bits (598), Expect = 5.8e-58
Identity = 151/206 (73.30%), Postives = 169/206 (82.04%), Query Frame = 0


Query: 1   MAET-TSREETTFDAKRKP-DPCCEAKEEHSNKIQKLEVVKDESCHDVKKS-ENGDHKRS 60
           MAET +SREET FD KRKP DPCCEAKEE SNKIQKLEVV+ E C+DVKK+ +NGDHK+ 
Sbjct: 1   MAETASSREETAFDGKRKPADPCCEAKEERSNKIQKLEVVEGEPCNDVKKNGDNGDHKQG 60

Query: 61  DEHIDDDSLAAEGK-DGEVGAGVDAGEADDEEDDEEDYEDENDEEDEEEDASEAVEDRKG 120
           DE ID+ S AAEGK DG + A VDAG+  +++DDE+D E+      E+     A EDRKG
Sbjct: 61  DEQIDNISSAAEGKDDGVLAADVDAGDEGEDDDDEDDCEN-----GEKSSGKAAKEDRKG 120

Query: 121 KGIVKDDKGKGKLIEE--DDDDDDEDSSDGGSELGSEESDLSDDPLAEVDLDNILPSRTR 180
           KGI+KDDKGKGKLIEE  DDDDDDEDSSD GSE  +EESDLSDDPLAEVDLDNILPSRTR
Sbjct: 121 KGIMKDDKGKGKLIEEDDDDDDDDEDSSDDGSEFDNEESDLSDDPLAEVDLDNILPSRTR 180

Query: 181 RRTVHPGVYFAKDLGNDDDDSSDSDA 201
           RRTVHPGVYFA DLGN+DDDSSDSDA
Sbjct: 181 RRTVHPGVYFATDLGNEDDDSSDSDA 201

[Close]

BLAST of MS018658 vs. NCBI nr
Match: XP_038906649.1 (pheromone-processing carboxypeptidase KEX1 [Benincasa hispida] >XP_038906650.1 pheromone-processing carboxypeptidase KEX1 [Benincasa hispida])

HSP 1 Score: 233.4 bits (594), Expect = 1.7e-57
Identity = 155/207 (74.88%), Postives = 171/207 (82.61%), Query Frame = 0


Query: 1   MAETTSREETTFDAKRKP-DPCCEAKEEHSNKIQKLEVVK-DESCHDVKKS-ENGD-HKR 60
           MAETT+ EE  FDAKRKP DPCCEAKEE SNK+QKLEVV+ +ESC+DVKK+ ENGD HK 
Sbjct: 1   MAETTTMEEVAFDAKRKPADPCCEAKEERSNKLQKLEVVEGEESCNDVKKNGENGDHHKE 60

Query: 61  SDEHIDD-DSLAAEGK--DGEVGAGVDAGEADDEEDDEEDYEDENDEEDEEEDASEAVED 120
           +DE ID+  S  AEGK  DG VGA +DAG      D+ ED EDE+D E+ E+ + +A ED
Sbjct: 61  NDESIDNVSSSVAEGKDDDGVVGADLDAG------DEVEDDEDEDDSENGEKSSGKAAED 120

Query: 121 RKGKGIVKDDKGKGKLIEEDDDDDDEDSSDGGSELGSEESDLSDDPLAEVDLDNILPSRT 180
           RKGKGI+KDDKGKGKLIEE DDDDDEDSSD GSEL SEESDLSDDPLAEVDLDNILPSRT
Sbjct: 121 RKGKGIMKDDKGKGKLIEE-DDDDDEDSSDDGSELDSEESDLSDDPLAEVDLDNILPSRT 180

Query: 181 RRRTVHPGVYFAKDLGNDDDDSSDSDA 201
           RRR VHPGVYFA DLGNDDDDSSDSDA
Sbjct: 181 RRRKVHPGVYFATDLGNDDDDSSDSDA 200

[Close]

BLAST of MS018658 vs. ExPASy TrEMBL
Match: A0A6J1CKB5 (prothymosin alpha-B OS=Momordica charantia OX=3673 GN=LOC111011780 PE=4 SV=1)

HSP 1 Score: 354.0 bits (907), Expect = 4.1e-94
Identity = 198/200 (99.00%), Postives = 198/200 (99.00%), Query Frame = 0


Query: 1   MAETTSREETTFDAKRKPDPCCEAKEEHSNKIQKLEVVKDESCHDVKKSENGDHKRSDEH 60
           MAETTSREETTFDAKRKPDPCCEAKEEHSNKIQKLEVVKDESCHDVKKSENGDHKRSDEH
Sbjct: 1   MAETTSREETTFDAKRKPDPCCEAKEEHSNKIQKLEVVKDESCHDVKKSENGDHKRSDEH 60

Query: 61  IDDDSLAAEGKDGEVGAGVDAGEADDEEDDEEDYEDENDEEDEEEDASEAVEDRKGKGIV 120
           IDDDSLAAEGKDGEVGAGVDAGEADDEEDDEEDYEDENDE DEEEDASEAVEDRKGKGIV
Sbjct: 61  IDDDSLAAEGKDGEVGAGVDAGEADDEEDDEEDYEDENDEVDEEEDASEAVEDRKGKGIV 120

Query: 121 KDDKGKGKLIEEDDDDDDEDSSDGGSELGSEESDLSDDPLAEVDLDNILPSRTRRRTVHP 180
           KDDKGKGKLIEEDDDDDDEDSSDGGSELGSEESDLSDDPL EVDLDNILPSRTRRRTVHP
Sbjct: 121 KDDKGKGKLIEEDDDDDDEDSSDGGSELGSEESDLSDDPLTEVDLDNILPSRTRRRTVHP 180

Query: 181 GVYFAKDLGNDDDDSSDSDA 201
           GVYFAKDLGNDDDDSSDSDA
Sbjct: 181 GVYFAKDLGNDDDDSSDSDA 200

[Close]

BLAST of MS018658 vs. ExPASy TrEMBL
Match: A0A6J1K0H1 (nucleolin-like OS=Cucurbita maxima OX=3661 GN=LOC111489076 PE=4 SV=1)

HSP 1 Score: 236.9 bits (603), Expect = 7.4e-59
Identity = 153/206 (74.27%), Postives = 170/206 (82.52%), Query Frame = 0


Query: 1   MAET-TSREETTFDAKRKP-DPCCEAKEEHSNKIQKLEVVKDESCHDVKKS-ENGDHKRS 60
           MAET +SREET FDAKRKP DPCCEAKEE SNKIQKLEVV+ E C+DVKK+ +NGDHK+ 
Sbjct: 1   MAETASSREETAFDAKRKPADPCCEAKEERSNKIQKLEVVEGEPCNDVKKNGDNGDHKQG 60

Query: 61  DEHIDDDSLAAEGK-DGEVGAGVDAGEADDEEDDEEDYEDENDEEDEEEDASEAVEDRKG 120
           DE ID  S AAEGK DG   A VDAG      ++ EDY DE+D E+ E+ + +A +DRKG
Sbjct: 61  DEQIDSISSAAEGKDDGVFAADVDAG------NEGEDYNDEDDCENGEKSSGKAAKDRKG 120

Query: 121 KGIVKDDKGKGKLIEE--DDDDDDEDSSDGGSELGSEESDLSDDPLAEVDLDNILPSRTR 180
           KGI+KDDKGKGKLIEE  DDDDDDEDSSD GSE  +EESDLSDDPLAEVDLDNILPSRTR
Sbjct: 121 KGIMKDDKGKGKLIEEDDDDDDDDEDSSDDGSEFDNEESDLSDDPLAEVDLDNILPSRTR 180

Query: 181 RRTVHPGVYFAKDLGNDDDDSSDSDA 201
           RRTVHPGVYFA DLGN+DDDSSDSDA
Sbjct: 181 RRTVHPGVYFATDLGNEDDDSSDSDA 200

[Close]

BLAST of MS018658 vs. ExPASy TrEMBL
Match: A0A6J1FM23 (prostatic spermine-binding protein isoform X2 OS=Cucurbita moschata OX=3662 GN=LOC111445199 PE=4 SV=1)

HSP 1 Score: 235.7 bits (600), Expect = 1.6e-58
Identity = 151/205 (73.66%), Postives = 170/205 (82.93%), Query Frame = 0


Query: 1   MAET-TSREETTFDAKRKP-DPCCEAKEEHSNKIQKLEVVKDESCHDVKKS-ENGDHKRS 60
           MAET +SREET FDAKRKP DPCCEAKEE SNKIQKLEVV+ E C+DVKK+ +NGDHK+ 
Sbjct: 1   MAETASSREETAFDAKRKPADPCCEAKEERSNKIQKLEVVEGEPCNDVKKNGDNGDHKQG 60

Query: 61  DEHIDDDSLAAEGK-DGEVGAGVDAGEADDEEDDEEDYEDENDEEDEEEDASEAVEDRKG 120
           D+ ID+ S AAEGK DG + A VDAG+  +++DDE+D E+      E+     A EDRKG
Sbjct: 61  DDQIDNISSAAEGKDDGVLAADVDAGDEGEDDDDEDDCEN-----GEKSSGKAAKEDRKG 120

Query: 121 KGIVKDDKGKGKLIEE-DDDDDDEDSSDGGSELGSEESDLSDDPLAEVDLDNILPSRTRR 180
           KGI+KDDKGKGKLIEE DDDDDDEDSSD GSE  +EESDLSDDPLAEVDLDNILPSRTRR
Sbjct: 121 KGIMKDDKGKGKLIEEDDDDDDDEDSSDDGSEFDNEESDLSDDPLAEVDLDNILPSRTRR 180

Query: 181 RTVHPGVYFAKDLGNDDDDSSDSDA 201
           RTVHPGVYFA DLGN+DDDSSDSDA
Sbjct: 181 RTVHPGVYFATDLGNEDDDSSDSDA 200

[Close]

BLAST of MS018658 vs. ExPASy TrEMBL
Match: A0A0A0KMR8 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G312330 PE=4 SV=1)

HSP 1 Score: 224.2 bits (570), Expect = 5.0e-55
Identity = 148/207 (71.50%), Postives = 167/207 (80.68%), Query Frame = 0


Query: 1   MAETTSR-EETTFDAKRKP-DPCCEAKEEHSNKIQKLEVVK-DESCHDV-KKSENGDHKR 60
           MAE T+R EE  FDAKRKP D C + KEE SNKIQKLEVV+ +ESC+ V   +ENGDHK 
Sbjct: 1   MAEITNREEEVAFDAKRKPTDSCFQPKEERSNKIQKLEVVEGEESCNYVNNNAENGDHKG 60

Query: 61  SDEHIDDDS---LAAEGKDGEVGAGVDAGEADDEEDDEEDYEDENDEEDEEEDASEAVED 120
           SDE +D+ S   L  +G DG  GA +DAG      D+EEDYEDE+D ED+E+ +++  ED
Sbjct: 61  SDEQVDNISSTVLEGKGDDGVDGASLDAG------DEEEDYEDEDDSEDDEKSSAKVAED 120

Query: 121 RKGKGIVKDDKGKGKLIEEDDDDDDEDSSDGGSELGSEESDLSDDPLAEVDLDNILPSRT 180
           RKGKGI+KDDKGKGKLIEE DDDDDEDSSD GS+L SEESDLSDDPLAEVDLDNILPSRT
Sbjct: 121 RKGKGIMKDDKGKGKLIEE-DDDDDEDSSDDGSQLDSEESDLSDDPLAEVDLDNILPSRT 180

Query: 181 RRRTVHPGVYFAKDLGNDDDDSSDSDA 201
           RRRTVHPGVYFA DLGNDDDDSSDSDA
Sbjct: 181 RRRTVHPGVYFATDLGNDDDDSSDSDA 200

[Close]

BLAST of MS018658 vs. ExPASy TrEMBL
Match: A0A1S3CIW7 (acidic repeat-containing protein OS=Cucumis melo OX=3656 GN=LOC103501347 PE=4 SV=1)

HSP 1 Score: 219.2 bits (557), Expect = 1.6e-53
Identity = 149/208 (71.63%), Postives = 165/208 (79.33%), Query Frame = 0


Query: 1   MAETTSR-EETTFDAKRKP-DPCCEAKEEHSNKIQKLEVVK-DESCHDVK-KSENGDHKR 60
           MAE T+R EE  FDAKRKP D C + KEE SNKIQKLEVV+ +ESC+ VK  +ENGDHK 
Sbjct: 1   MAEITNRKEEVAFDAKRKPADSCFQPKEESSNKIQKLEVVEGEESCNYVKNNAENGDHKG 60

Query: 61  SDEHIDD-DSLAAEGK--DGEVGAGVDAGEADDEEDDEEDYEDENDEEDEEEDASEAVED 120
           SDE ID+  S   EGK  DG  GA +DAG      D+EEDYEDE+D ED+E+ + +   D
Sbjct: 61  SDEQIDNVSSTVLEGKDDDGVDGASLDAG------DEEEDYEDEDDSEDDEKSSGKVAAD 120

Query: 121 RKGKGIVKDDKGKGKLIEE-DDDDDDEDSSDGGSELGSEESDLSDDPLAEVDLDNILPSR 180
           RKGKGI+KDDKGKGKLIEE DDDDDDEDSSD GS+L SEESDLSDDPLAEVDLDNILPSR
Sbjct: 121 RKGKGIMKDDKGKGKLIEEDDDDDDDEDSSDDGSDLDSEESDLSDDPLAEVDLDNILPSR 180

Query: 181 TRRRTVHPGVYFAKDLGNDDDDSSDSDA 201
           TRRR VHPGVYFA DL NDDDDSSDSDA
Sbjct: 181 TRRRMVHPGVYFATDLANDDDDSSDSDA 202

[Close]

BLAST of MS018658 vs. TAIR 10
Match: AT1G12830.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; Has 39778 Blast hits to 22088 proteins in 1060 species: Archae - 152; Bacteria - 6161; Metazoa - 14109; Fungi - 6144; Plants - 2156; Viruses - 601; Other Eukaryotes - 10455 (source: NCBI BLink). )

HSP 1 Score: 112.1 bits (279), Expect = 5.3e-25
Identity = 100/218 (45.87%), Postives = 142/218 (65.14%), Query Frame = 0


Query: 1   MAETTSREETTFDAKRKPDPCCEAKEEHSNKIQKLEVVKDESCHDVKKSE-NGD------ 60
           MA+  ++++++F  KRK D  C+ ++  +NK QKL    + +  + K  E NG       
Sbjct: 1   MADVENQQDSSFPVKRKSDLFCQDQDNVTNKAQKLNPSLNSADSESKDGETNGSGQIENL 60

Query: 61  HKRSDEHID-DDSLAAEGKDGEVGAGV--DAGEADDEEDDEEDYEDENDEEDEEEDASEA 120
           +  ++E I  + S+ +E    EV +GV  D G A++E++DEED E+E+DEE+EEE   E 
Sbjct: 61  NSSTEETIGAESSVLSEKAAEEVESGVIGDVG-AEEEQEDEED-EEEDDEEEEEE---EE 120

Query: 121 VEDRKGKGIVKDDKGKGKLIEEDDDDDDEDSSDGGSELG---SEESDLSDDPLAEVDLDN 180
           V DRKGKGI ++DKGKGK+IE ++ DD++DS D   + G    +ESD SDDPLAEVDLDN
Sbjct: 121 VVDRKGKGISREDKGKGKMIEVEESDDEDDSDDDEDDEGFDEDDESDFSDDPLAEVDLDN 180

Query: 181 ILPSRTRRRTVHPGVYFAKDLGN-----DDDDSSDSDA 201
           ILPSRTRRR+  PGV+   +  N     +DD+SSDSDA
Sbjct: 181 ILPSRTRRRSSQPGVFIPNEFSNRHVNDEDDESSDSDA 213

The following BLAST results are available for this feature:

BLAST of MS018658 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022141363.1	8.6e-94	99.00	prothymosin alpha-B [Momordica charantia]	[more]
XP_022992871.1	1.5e-58	74.27	nucleolin-like [Cucurbita maxima] >XP_022992872.1 nucleolin-like [Cucurbita maxi...	[more]
XP_022939215.1	3.4e-58	73.66	prostatic spermine-binding protein isoform X2 [Cucurbita moschata] >XP_022939216...	[more]
XP_023551083.1	5.8e-58	73.30	nucleolin-like [Cucurbita pepo subsp. pepo] >XP_023551084.1 nucleolin-like [Cucu...	[more]
XP_038906649.1	1.7e-57	74.88	pheromone-processing carboxypeptidase KEX1 [Benincasa hispida] >XP_038906650.1 p...	[more]

BLAST of MS018658 vs. NCBI nr


Match Name	E-value	Identity	Description

BLAST of MS018658 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1CKB5	4.1e-94	99.00	prothymosin alpha-B OS=Momordica charantia OX=3673 GN=LOC111011780 PE=4 SV=1	[more]
A0A6J1K0H1	7.4e-59	74.27	nucleolin-like OS=Cucurbita maxima OX=3661 GN=LOC111489076 PE=4 SV=1	[more]
A0A6J1FM23	1.6e-58	73.66	prostatic spermine-binding protein isoform X2 OS=Cucurbita moschata OX=3662 GN=L...	[more]
A0A0A0KMR8	5.0e-55	71.50	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G312330 PE=4 SV=1	[more]
A0A1S3CIW7	1.6e-53	71.63	acidic repeat-containing protein OS=Cucumis melo OX=3656 GN=LOC103501347 PE=4 SV...	[more]

BLAST of MS018658 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G12830.1	5.3e-25	45.87	unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic...	[more]

InterPro

Analysis Name: InterPro Annotations of Bitter gourd (TR) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 84..114
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..200
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 132..161
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..70
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 79..109
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 110..131
None	No IPR available	PANTHER	PTHR36899	OS04G0395700 PROTEIN	coord: 1..200

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
MS018658.1	MS018658.1	mRNA