MS018621 (gene) Bitter gourd (TR) v1

Overview


Name	MS018621
Type	gene
Organism	Momordica charantia cv. TR (Bitter gourd (TR) v1)
Description	Voltage-dependent L-type calcium channel subunit
Location	scaffold313: 508895 .. 511196 (+)
RNA-Seq Expression	MS018621
Synteny	MS018621

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGGCGAGCCGTACGACTCCGATGACCGGAATGGCGCCGTGACGGTTGAGGAAGAAGATGGAGTCAGTTACAGTTCCAAAGGAGTGCGCAGTGAGGATCAGACCGTCTACGAGCCTCTCCGCCGTCTGATCGCTGAGATTTTCTTCCCCGATGAATTTAAGGGCACTTCTCTGTTTCACCGTGTTAAGCTTTCCGTCGCCGAGAATGGTCCGGCCGTTGGCCAGGCTTGCAGAAACGTAGGTCGCGATGTTCTTCGCTGGACTCGCAGGGGCAGTCCTCTTCGAGCTCTCCTTGTTATCTCCGTGAGTATTCCACATGATACCAAATTGAGATTGTCAATGCTTTTTTCTCATATAGTGAATGGATTATATACTTTGAATGTTGGAAATTTGGAATTTATTGCTCAAATTATTCCTTCTCTGTTGTTTGTTCATCTATGTTTGAAGGTTCCGGTTGATCTGCACTGGTTTTTTTCTTAATAGGAATTCATTTTCGTGGTAACTAATGTTATTTGTCTTGATCTGCTAGAGACTAGTCTTTTTAATCTAGTTATAACAATTCCTGACCTAAGCAAACGACTTCGGAGAGGACTCTAGTGGTAGTGTTTTTGATGATTGGAGAAAAGATTTCCATCATTTTGTTTCGATCCATTTGCCAATAGTCTTACTTTGTTGTGCACATATTTGTAGCTGAACCAAAAAAGCCTTCAGTCTGTCTATTGTAACTCATTTCAGCCCACAAATGTGAAACATTGTCCACCCAACATTTGAAGTGAGATTGGCAGTTTGTTGTTGGAAAATAGAGATTTCATTAACATAAACGTTAACGTTATGATTCCTGAACTTGTGACAAATGTTAGGTTTCGTGTGAGATAGATATAGGATCTTCATAGATACTTTTATAGTTGGAGACCATTTCTGAAAGATTGTTAAATTTCTGGATCCATATGAAGTTCCCTTACGTTATTTTGTGATTTCACTTGTTTCTTATTAGCGGTGTGTTGAGAGTTGTTTGTTCCTTTTGGCATTGTTATGGGTTGCTCGACCCCCTCTTTGAAAACTTCTGTTAATGATTTTTTTTACCATCTAAAAATATGATAAATCAGGAATAAATGATAGGAAGTGTTATTAATTAGTATTAAAAAAAAAAAAAGGATAGGAAGTGTTATTAACAATTGAGAGAAGAAAATATTCTGTCGACCCTTGGAAGTCAAGGAGGGTGCAACTGGTGAAATGATATAAAACACAAGCCAAGGTTCCTAGAATAGTTTGGTACTGATGCTTGATGCTGGTCCTTTGACGCTTTTATTTGTTTTGATCTGTTGCAAGATTTTCGTTGCACTTATTCCCTCCACACACTAACGCAGCCTGATGCCCATTTTTAGTCCTCCCCCCTCTGAGCACCCCTTTAAATTGTTAAACATTTGGAATTGCTGCAGGTTGGGACTATTGCTCTTCTTGCATTGACGGGATTGCTCATCTTTCTGCTATTCTTTCTGGCAGCAACTCTGAATGCCATTATCATTTCTCTTCTCGTTTCCTTGGCTGCAGTTGGAGGCTTCTTGGCTCTTTTCTTTGCCTGTGTAACGGCTGTATACATCGGAGCCTTAACAGTTGCTGTGTTTGTTATATCCACTGCAACATTCTCTGCAATTGTAGCAGTGTTGGTTGCCGCAGGTAACAACTATACATAGACACTTATCTAAATTATATTCCTTGAAAATCTCTATATTGTATTAACATGAATCTCTACGTACTGGTTTGACATGGTCTGGGTTTCTCAAGGAAAAAATGAGTATGTAGTTCAAATATCTGCATCGATGTGTTCAGCTTTCTAGCTTGTTTCTGCTCTCTCTTTCATTGAGGGTATTACGAAAGTTTAAGACTCATGTCGCTGCTCTACCAAACAATTTGGATGGTTTCCACCAAAGAATTTTTGCCTTCAATTCCTAATTAGGTAGTTTGTGGACTTTGCTCTCCACGGTGCTATCAGAATAATAGGTTTCATGCTATGTCAATCAATCTCGGCGTAAGCACAGCATGCCATACACTAATCAATTATATGGCTTTTATAATTCTACAATTCCCACTGTTTTTGTTCCTCTTCATAGGAGGATTAAACCTTGTGGCAATTATGCACTGTTTAAATTTATTTCCTTGCTCTGAAAATTCAGGTTGGATTGGGTTCTTCTGTGTGGTTTGGCTGGCAGTACGGAGAAGTTTTGGCTTTGCTAAGCAGTCATTGAGCGCAAGCAGTTCAGCAATTTCGGCATTTTCTTATGCTAGGCGTGCTCACAAAGAC

mRNA sequence

ATGGGCGAGCCGTACGACTCCGATGACCGGAATGGCGCCGTGACGGTTGAGGAAGAAGATGGAGTCAGTTACAGTTCCAAAGGAGTGCGCAGTGAGGATCAGACCGTCTACGAGCCTCTCCGCCGTCTGATCGCTGAGATTTTCTTCCCCGATGAATTTAAGGGCACTTCTCTGTTTCACCGTGTTAAGCTTTCCGTCGCCGAGAATGGTCCGGCCGTTGGCCAGGCTTGCAGAAACGTAGGTCGCGATGTTCTTCGCTGGACTCGCAGGGGCAGTCCTCTTCGAGCTCTCCTTGTTATCTCCGTTGGGACTATTGCTCTTCTTGCATTGACGGGATTGCTCATCTTTCTGCTATTCTTTCTGGCAGCAACTCTGAATGCCATTATCATTTCTCTTCTCGTTTCCTTGGCTGCAGTTGGAGGCTTCTTGGCTCTTTTCTTTGCCTGTGTAACGGCTGTATACATCGGAGCCTTAACAGTTGCTGTGTTTGTTATATCCACTGCAACATTCTCTGCAATTGTAGCAGTGTTGGTTGCCGCAGGTTGGATTGGGTTCTTCTGTGTGGTTTGGCTGGCAGTACGGAGAAGTTTTGGCTTTGCTAAGCAGTCATTGAGCGCAAGCAGTTCAGCAATTTCGGCATTTTCTTATGCTAGGCGTGCTCACAAAGAC

Coding sequence (CDS)

ATGGGCGAGCCGTACGACTCCGATGACCGGAATGGCGCCGTGACGGTTGAGGAAGAAGATGGAGTCAGTTACAGTTCCAAAGGAGTGCGCAGTGAGGATCAGACCGTCTACGAGCCTCTCCGCCGTCTGATCGCTGAGATTTTCTTCCCCGATGAATTTAAGGGCACTTCTCTGTTTCACCGTGTTAAGCTTTCCGTCGCCGAGAATGGTCCGGCCGTTGGCCAGGCTTGCAGAAACGTAGGTCGCGATGTTCTTCGCTGGACTCGCAGGGGCAGTCCTCTTCGAGCTCTCCTTGTTATCTCCGTTGGGACTATTGCTCTTCTTGCATTGACGGGATTGCTCATCTTTCTGCTATTCTTTCTGGCAGCAACTCTGAATGCCATTATCATTTCTCTTCTCGTTTCCTTGGCTGCAGTTGGAGGCTTCTTGGCTCTTTTCTTTGCCTGTGTAACGGCTGTATACATCGGAGCCTTAACAGTTGCTGTGTTTGTTATATCCACTGCAACATTCTCTGCAATTGTAGCAGTGTTGGTTGCCGCAGGTTGGATTGGGTTCTTCTGTGTGGTTTGGCTGGCAGTACGGAGAAGTTTTGGCTTTGCTAAGCAGTCATTGAGCGCAAGCAGTTCAGCAATTTCGGCATTTTCTTATGCTAGGCGTGCTCACAAAGAC

Protein sequence

MGEPYDSDDRNGAVTVEEEDGVSYSSKGVRSEDQTVYEPLRRLIAEIFFPDEFKGTSLFHRVKLSVAENGPAVGQACRNVGRDVLRWTRRGSPLRALLVISVGTIALLALTGLLIFLLFFLAATLNAIIISLLVSLAAVGGFLALFFACVTAVYIGALTVAVFVISTATFSAIVAVLVAAGWIGFFCVVWLAVRRSFGFAKQSLSASSSAISAFSYARRAHKD

Homology

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BLAST of MS018621 vs. NCBI nr
Match: XP_022141354.1 (uncharacterized protein LOC111011773 [Momordica charantia])

HSP 1 Score: 397.5 bits (1020), Expect = 7.5e-107
Identity = 222/223 (99.55%), Postives = 222/223 (99.55%), Query Frame = 0


Query: 1   MGEPYDSDDRNGAVTVEEEDGVSYSSKGVRSEDQTVYEPLRRLIAEIFFPDEFKGTSLFH 60
           MGEPYDSDDRNGAVTVEEEDGVSYSSKGVRSEDQTVYEPLRRLIAEIFFPDEFKGTSLFH
Sbjct: 1   MGEPYDSDDRNGAVTVEEEDGVSYSSKGVRSEDQTVYEPLRRLIAEIFFPDEFKGTSLFH 60

Query: 61  RVKLSVAENGPAVGQACRNVGRDVLRWTRRGSPLRALLVISVGTIALLALTGLLIFLLFF 120
           RVKLSVAENGPAVGQACRNVGRDVLRWTRRGSPLRALLVISVGTIALLALTGLLIFLLFF
Sbjct: 61  RVKLSVAENGPAVGQACRNVGRDVLRWTRRGSPLRALLVISVGTIALLALTGLLIFLLFF 120

Query: 121 LAATLNAIIISLLVSLAAVGGFLALFFACVTAVYIGALTVAVFVISTATFSAIVAVLVAA 180
           LAATLNAIIISLLVSLAAVGGFLALFFACVTAVYIGALTVAVFVISTATFSAIVAVLVA 
Sbjct: 121 LAATLNAIIISLLVSLAAVGGFLALFFACVTAVYIGALTVAVFVISTATFSAIVAVLVAT 180

Query: 181 GWIGFFCVVWLAVRRSFGFAKQSLSASSSAISAFSYARRAHKD 224
           GWIGFFCVVWLAVRRSFGFAKQSLSASSSAISAFSYARRAHKD
Sbjct: 181 GWIGFFCVVWLAVRRSFGFAKQSLSASSSAISAFSYARRAHKD 223

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BLAST of MS018621 vs. NCBI nr
Match: XP_038906498.1 (uncharacterized protein LOC120092475 [Benincasa hispida])

HSP 1 Score: 335.5 bits (859), Expect = 3.5e-88
Identity = 188/223 (84.30%), Postives = 201/223 (90.13%), Query Frame = 0


Query: 1   MGEPYDSDDRNGAVTVEEEDGVSYSSKGVRSEDQTVYEPLRRLIAEIFFPDEFKGTSLFH 60
           M E YDSDDRN    VEEED  S+ SKGVR ED TVYEPLRRLI EIFFPDE KG+SLF 
Sbjct: 1   MAEAYDSDDRNATGPVEEEDASSHQSKGVRVEDHTVYEPLRRLIVEIFFPDETKGSSLFQ 60

Query: 61  RVKLSVAENGPAVGQACRNVGRDVLRWTRRGSPLRALLVISVGTIALLALTGLLIFLLFF 120
           RVK+SVAENGPAVGQACRN GRDVL WTRRGSPLRALLVISVGTI LLALTG LIFLLFF
Sbjct: 61  RVKVSVAENGPAVGQACRNFGRDVLCWTRRGSPLRALLVISVGTIVLLALTGSLIFLLFF 120

Query: 121 LAATLNAIIISLLVSLAAVGGFLALFFACVTAVYIGALTVAVFVISTATFSAIVAVLVAA 180
           LAATLNAIIISLLVSLAAVGGFLALFFACVTA+YIGAL VA+FVISTAT SAIV V++AA
Sbjct: 121 LAATLNAIIISLLVSLAAVGGFLALFFACVTAIYIGALAVALFVISTATISAIVGVVIAA 180

Query: 181 GWIGFFCVVWLAVRRSFGFAKQSLSASSSAISAFSYARRAHKD 224
           GW+GFFCVVWLAVR+SFG AK+S++AS+SAISAFSYARRAHKD
Sbjct: 181 GWVGFFCVVWLAVRKSFGLAKRSVTASNSAISAFSYARRAHKD 223

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BLAST of MS018621 vs. NCBI nr
Match: XP_023514904.1 (uncharacterized protein LOC111779077 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 331.3 bits (848), Expect = 6.6e-87
Identity = 183/223 (82.06%), Postives = 203/223 (91.03%), Query Frame = 0


Query: 1   MGEPYDSDDRNGAVTVEEEDGVSYSSKGVRSEDQTVYEPLRRLIAEIFFPDEFKGTSLFH 60
           M E YDSDDRNG V VEE+D  S+ SKGV + DQTVYE LRRLIAE+F PD+ KG+SLF 
Sbjct: 1   MAEKYDSDDRNGTVPVEEQDRTSHKSKGVYNMDQTVYETLRRLIAEVFSPDKAKGSSLFQ 60

Query: 61  RVKLSVAENGPAVGQACRNVGRDVLRWTRRGSPLRALLVISVGTIALLALTGLLIFLLFF 120
           RVK+S+ ENGPAV +ACRN+GRDVL WTRRGSPLRALLVISVGTIALLALTGLLIFLLFF
Sbjct: 61  RVKVSITENGPAVEKACRNIGRDVLCWTRRGSPLRALLVISVGTIALLALTGLLIFLLFF 120

Query: 121 LAATLNAIIISLLVSLAAVGGFLALFFACVTAVYIGALTVAVFVISTATFSAIVAVLVAA 180
           LAAT NA++ISLLVSLAAVGGFLALFFAC+TAVYIGALTVA+FVISTAT SAIVAV++AA
Sbjct: 121 LAATFNAVVISLLVSLAAVGGFLALFFACITAVYIGALTVALFVISTATISAIVAVVIAA 180

Query: 181 GWIGFFCVVWLAVRRSFGFAKQSLSASSSAISAFSYARRAHKD 224
           GWIGFFCVVWLA+R+SFG AKQS+SA SSAISAFS+ARRAHKD
Sbjct: 181 GWIGFFCVVWLAIRKSFGIAKQSMSAGSSAISAFSHARRAHKD 223

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BLAST of MS018621 vs. NCBI nr
Match: XP_004140295.1 (uncharacterized protein LOC101212066 [Cucumis sativus] >KGN51068.1 hypothetical protein Csa_009396 [Cucumis sativus])

HSP 1 Score: 329.3 bits (843), Expect = 2.5e-86
Identity = 185/223 (82.96%), Postives = 202/223 (90.58%), Query Frame = 0


Query: 1   MGEPYDSDDRNGAVTVEEEDGVSYSSKGVRSEDQTVYEPLRRLIAEIFFPDEFKGTSLFH 60
           M E +DSDDRN  V VEEED  S+ SKGV +EDQTVYEPLRRLIAEIFFPDE KG SLFH
Sbjct: 1   MAEAHDSDDRNTTVPVEEEDASSHQSKGVCTEDQTVYEPLRRLIAEIFFPDEIKG-SLFH 60

Query: 61  RVKLSVAENGPAVGQACRNVGRDVLRWTRRGSPLRALLVISVGTIALLALTGLLIFLLFF 120
           RVK+SV +NGPAV QACRN GRDVL WTRRGSPLRALLVISVGTI LLA+TG LIFL FF
Sbjct: 61  RVKVSVTDNGPAVAQACRNFGRDVLSWTRRGSPLRALLVISVGTIVLLAMTGSLIFLFFF 120

Query: 121 LAATLNAIIISLLVSLAAVGGFLALFFACVTAVYIGALTVAVFVISTATFSAIVAVLVAA 180
           LAATLNAIIISLLVSLAAVGGFLALFFACVTA+Y+GAL VA+FVISTAT SAIVAV++AA
Sbjct: 121 LAATLNAIIISLLVSLAAVGGFLALFFACVTAIYVGALGVALFVISTATISAIVAVVIAA 180

Query: 181 GWIGFFCVVWLAVRRSFGFAKQSLSASSSAISAFSYARRAHKD 224
           GWIGFFC+VWLA+R+SFG AK+S+SAS+SAISAFSYARRAHKD
Sbjct: 181 GWIGFFCMVWLAIRKSFGLAKRSVSASNSAISAFSYARRAHKD 222

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BLAST of MS018621 vs. NCBI nr
Match: KAG6602021.1 (hypothetical protein SDJN03_07254, partial [Cucurbita argyrosperma subsp. sororia] >KAG7032716.1 hypothetical protein SDJN02_06766 [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 328.9 bits (842), Expect = 3.3e-86
Identity = 182/223 (81.61%), Postives = 203/223 (91.03%), Query Frame = 0


Query: 1   MGEPYDSDDRNGAVTVEEEDGVSYSSKGVRSEDQTVYEPLRRLIAEIFFPDEFKGTSLFH 60
           M E YDSDDRNG V VEE+D  S+ SKGV + D+TVYE LRRLIAE+F PD+ KG+SLF 
Sbjct: 1   MAEKYDSDDRNGTVPVEEQDRTSHKSKGVYNMDRTVYETLRRLIAEVFSPDKAKGSSLFQ 60

Query: 61  RVKLSVAENGPAVGQACRNVGRDVLRWTRRGSPLRALLVISVGTIALLALTGLLIFLLFF 120
           RVK+S+ ENGP+V +ACRN+GRDVL WTRRGSPLRALLVISVGTIALLALTGLLIFLLFF
Sbjct: 61  RVKVSITENGPSVEKACRNIGRDVLCWTRRGSPLRALLVISVGTIALLALTGLLIFLLFF 120

Query: 121 LAATLNAIIISLLVSLAAVGGFLALFFACVTAVYIGALTVAVFVISTATFSAIVAVLVAA 180
           LAAT NAI+ISLLVSLAAVGGFLALFFAC+TAVYIGALTVA+FVISTAT SAIVAV++AA
Sbjct: 121 LAATFNAIVISLLVSLAAVGGFLALFFACITAVYIGALTVALFVISTATISAIVAVVIAA 180

Query: 181 GWIGFFCVVWLAVRRSFGFAKQSLSASSSAISAFSYARRAHKD 224
           GWIGFFCVVWLA+R+SFG AKQS+SA SSAISAFS+ARRAHKD
Sbjct: 181 GWIGFFCVVWLAIRKSFGIAKQSMSAGSSAISAFSHARRAHKD 223

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BLAST of MS018621 vs. ExPASy TrEMBL
Match: A0A6J1CIE7 (uncharacterized protein LOC111011773 OS=Momordica charantia OX=3673 GN=LOC111011773 PE=4 SV=1)

HSP 1 Score: 397.5 bits (1020), Expect = 3.6e-107
Identity = 222/223 (99.55%), Postives = 222/223 (99.55%), Query Frame = 0


Query: 1   MGEPYDSDDRNGAVTVEEEDGVSYSSKGVRSEDQTVYEPLRRLIAEIFFPDEFKGTSLFH 60
           MGEPYDSDDRNGAVTVEEEDGVSYSSKGVRSEDQTVYEPLRRLIAEIFFPDEFKGTSLFH
Sbjct: 1   MGEPYDSDDRNGAVTVEEEDGVSYSSKGVRSEDQTVYEPLRRLIAEIFFPDEFKGTSLFH 60

Query: 61  RVKLSVAENGPAVGQACRNVGRDVLRWTRRGSPLRALLVISVGTIALLALTGLLIFLLFF 120
           RVKLSVAENGPAVGQACRNVGRDVLRWTRRGSPLRALLVISVGTIALLALTGLLIFLLFF
Sbjct: 61  RVKLSVAENGPAVGQACRNVGRDVLRWTRRGSPLRALLVISVGTIALLALTGLLIFLLFF 120

Query: 121 LAATLNAIIISLLVSLAAVGGFLALFFACVTAVYIGALTVAVFVISTATFSAIVAVLVAA 180
           LAATLNAIIISLLVSLAAVGGFLALFFACVTAVYIGALTVAVFVISTATFSAIVAVLVA 
Sbjct: 121 LAATLNAIIISLLVSLAAVGGFLALFFACVTAVYIGALTVAVFVISTATFSAIVAVLVAT 180

Query: 181 GWIGFFCVVWLAVRRSFGFAKQSLSASSSAISAFSYARRAHKD 224
           GWIGFFCVVWLAVRRSFGFAKQSLSASSSAISAFSYARRAHKD
Sbjct: 181 GWIGFFCVVWLAVRRSFGFAKQSLSASSSAISAFSYARRAHKD 223

[Close]

BLAST of MS018621 vs. ExPASy TrEMBL
Match: A0A0A0KNC3 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G427940 PE=4 SV=1)

HSP 1 Score: 329.3 bits (843), Expect = 1.2e-86
Identity = 185/223 (82.96%), Postives = 202/223 (90.58%), Query Frame = 0


Query: 1   MGEPYDSDDRNGAVTVEEEDGVSYSSKGVRSEDQTVYEPLRRLIAEIFFPDEFKGTSLFH 60
           M E +DSDDRN  V VEEED  S+ SKGV +EDQTVYEPLRRLIAEIFFPDE KG SLFH
Sbjct: 1   MAEAHDSDDRNTTVPVEEEDASSHQSKGVCTEDQTVYEPLRRLIAEIFFPDEIKG-SLFH 60

Query: 61  RVKLSVAENGPAVGQACRNVGRDVLRWTRRGSPLRALLVISVGTIALLALTGLLIFLLFF 120
           RVK+SV +NGPAV QACRN GRDVL WTRRGSPLRALLVISVGTI LLA+TG LIFL FF
Sbjct: 61  RVKVSVTDNGPAVAQACRNFGRDVLSWTRRGSPLRALLVISVGTIVLLAMTGSLIFLFFF 120

Query: 121 LAATLNAIIISLLVSLAAVGGFLALFFACVTAVYIGALTVAVFVISTATFSAIVAVLVAA 180
           LAATLNAIIISLLVSLAAVGGFLALFFACVTA+Y+GAL VA+FVISTAT SAIVAV++AA
Sbjct: 121 LAATLNAIIISLLVSLAAVGGFLALFFACVTAIYVGALGVALFVISTATISAIVAVVIAA 180

Query: 181 GWIGFFCVVWLAVRRSFGFAKQSLSASSSAISAFSYARRAHKD 224
           GWIGFFC+VWLA+R+SFG AK+S+SAS+SAISAFSYARRAHKD
Sbjct: 181 GWIGFFCMVWLAIRKSFGLAKRSVSASNSAISAFSYARRAHKD 222

[Close]

BLAST of MS018621 vs. ExPASy TrEMBL
Match: A0A6J1E7P4 (uncharacterized protein LOC111430635 OS=Cucurbita moschata OX=3662 GN=LOC111430635 PE=4 SV=1)

HSP 1 Score: 327.8 bits (839), Expect = 3.5e-86
Identity = 181/223 (81.17%), Postives = 203/223 (91.03%), Query Frame = 0


Query: 1   MGEPYDSDDRNGAVTVEEEDGVSYSSKGVRSEDQTVYEPLRRLIAEIFFPDEFKGTSLFH 60
           M E YDSDDRNG V V+E+D  S+ SKGV + D+TVYE LRRLIAE+F PD+ KG+SLF 
Sbjct: 1   MAEKYDSDDRNGTVPVDEQDRTSHKSKGVYNMDRTVYETLRRLIAEVFSPDKAKGSSLFQ 60

Query: 61  RVKLSVAENGPAVGQACRNVGRDVLRWTRRGSPLRALLVISVGTIALLALTGLLIFLLFF 120
           RVK+S+ ENGPAV +ACRN+GRDVL WTRRGSPLRALLVISVGTIALLALTGLLIFLLFF
Sbjct: 61  RVKVSITENGPAVEKACRNIGRDVLCWTRRGSPLRALLVISVGTIALLALTGLLIFLLFF 120

Query: 121 LAATLNAIIISLLVSLAAVGGFLALFFACVTAVYIGALTVAVFVISTATFSAIVAVLVAA 180
           LAAT NA++ISLLVSLAAVGGFLALFFAC+TAVYIGALTVA+FVISTAT SAIVAV++AA
Sbjct: 121 LAATFNAVVISLLVSLAAVGGFLALFFACITAVYIGALTVALFVISTATISAIVAVVIAA 180

Query: 181 GWIGFFCVVWLAVRRSFGFAKQSLSASSSAISAFSYARRAHKD 224
           GWIGFFCVVWLA+R+SFG AKQS+SA SSAISAFS+ARRAHKD
Sbjct: 181 GWIGFFCVVWLAMRKSFGIAKQSMSAGSSAISAFSHARRAHKD 223

[Close]

BLAST of MS018621 vs. ExPASy TrEMBL
Match: A0A6J1JJZ4 (uncharacterized protein LOC111487608 OS=Cucurbita maxima OX=3661 GN=LOC111487608 PE=4 SV=1)

HSP 1 Score: 327.4 bits (838), Expect = 4.6e-86
Identity = 180/223 (80.72%), Postives = 202/223 (90.58%), Query Frame = 0


Query: 1   MGEPYDSDDRNGAVTVEEEDGVSYSSKGVRSEDQTVYEPLRRLIAEIFFPDEFKGTSLFH 60
           M E YDSDDRNG V V+E++  S+ SKG+ SEDQTVYE LRRLIAE+F PD+ KG+SLF 
Sbjct: 1   MAEKYDSDDRNGTVPVDEQERTSHKSKGLHSEDQTVYETLRRLIAEVFSPDKAKGSSLFQ 60

Query: 61  RVKLSVAENGPAVGQACRNVGRDVLRWTRRGSPLRALLVISVGTIALLALTGLLIFLLFF 120
           RVK+S+ ENGPAV +ACRN+G DVL WTRRGSPLRALLVISVGTIALLALTGLLIFLLFF
Sbjct: 61  RVKVSITENGPAVEKACRNIGCDVLCWTRRGSPLRALLVISVGTIALLALTGLLIFLLFF 120

Query: 121 LAATLNAIIISLLVSLAAVGGFLALFFACVTAVYIGALTVAVFVISTATFSAIVAVLVAA 180
           LAAT NA++ISLLVSLAAVGGFLALFFAC+TAVYIGALTVA+FVISTAT SAIVAV++AA
Sbjct: 121 LAATFNAVVISLLVSLAAVGGFLALFFACITAVYIGALTVALFVISTATISAIVAVVIAA 180

Query: 181 GWIGFFCVVWLAVRRSFGFAKQSLSASSSAISAFSYARRAHKD 224
           GWIGFFCVVWLA+R+SFG AKQS+SA SS ISAFS+ARRAHKD
Sbjct: 181 GWIGFFCVVWLAIRKSFGIAKQSMSAGSSVISAFSHARRAHKD 223

[Close]

BLAST of MS018621 vs. ExPASy TrEMBL
Match: A0A5A7V6K3 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold387G00050 PE=4 SV=1)

HSP 1 Score: 319.7 bits (818), Expect = 9.7e-84
Identity = 182/223 (81.61%), Postives = 200/223 (89.69%), Query Frame = 0


Query: 1   MGEPYDSDDRNGAVTVEEEDGVSYSSKGVRSEDQTVYEPLRRLIAEIFFPDEFKGTSLFH 60
           M E +DSD RN  V VEEED  S+ SKG+  +DQTVYEPLRRLIAEIFFPDE KG SLFH
Sbjct: 1   MAEAHDSDARNTTVPVEEEDASSHQSKGLSIDDQTVYEPLRRLIAEIFFPDEIKG-SLFH 60

Query: 61  RVKLSVAENGPAVGQACRNVGRDVLRWTRRGSPLRALLVISVGTIALLALTGLLIFLLFF 120
           RVK+SVA+NGPAVGQACRN G DVL WTRRGSPLRALLVISVGTI LLA+TG LIFLLFF
Sbjct: 61  RVKVSVADNGPAVGQACRNFGHDVLSWTRRGSPLRALLVISVGTIVLLAMTGSLIFLLFF 120

Query: 121 LAATLNAIIISLLVSLAAVGGFLALFFACVTAVYIGALTVAVFVISTATFSAIVAVLVAA 180
           LAATLNAIIISLLVSLAAVGGFLALFFACVTA+Y+GAL VA+FVISTAT SAIVAV++AA
Sbjct: 121 LAATLNAIIISLLVSLAAVGGFLALFFACVTAIYVGALGVALFVISTATISAIVAVVIAA 180

Query: 181 GWIGFFCVVWLAVRRSFGFAKQSLSASSSAISAFSYARRAHKD 224
           GWIGFF +VWLA+ +SFG AK+S+SAS+SAISAFSYARRAHKD
Sbjct: 181 GWIGFFFMVWLAICKSFGLAKRSVSASNSAISAFSYARRAHKD 222

[Close]

BLAST of MS018621 vs. TAIR 10
Match: AT5G16550.1 (unknown protein; Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). )

HSP 1 Score: 183.3 bits (464), Expect = 2.1e-46
Identity = 122/229 (53.28%), Postives = 153/229 (66.81%), Query Frame = 0


Query: 1   MGEPYDSDDRNG---AVTVEEEDGVSYSSKGVRSED-QTVYEPLRRLIAEIFFPDEFKG- 60
           +GE  +   +NG     +VE+ED           ED +++Y  +   I  I FPD   G 
Sbjct: 22  VGEIVNGGTKNGYRKPDSVEKED----------DEDLKSLYSLICLTIGSILFPDSKTGD 81

Query: 61  -TSLFHRVKLSVAENGPAVGQACRNVGRDVLRWTRRGSPLRALLVISVGTIALLALTGLL 120
            +S   RV+ SVAENGP + +A    GR++L WTRRGS LRALLVI++GTI LL    L+
Sbjct: 82  ASSFLERVRNSVAENGPKLREASERTGREILLWTRRGSSLRALLVITMGTIVLLTTMALV 141

Query: 121 IFLLFFLAATLNAIIISLLVSLAAVGGFLALFFACVTAVYIGALTVAVFVISTATFSAIV 180
           +F LFF+AAT NAIIISLL+SLA  GGFLALFF C+T VYIGAL+VA FVISTAT SA+V
Sbjct: 142 VFTLFFVAATANAIIISLLISLAVAGGFLALFFLCLTGVYIGALSVAAFVISTATVSAVV 201

Query: 181 AVLVAAGWIGFFCVVWLAVRRSFGFAKQSLSASSSAISAFSYARRAHKD 224
           +VL+A+GWIGFF  VWL  R S   AKQS+S   SAIS  + +R  H+D
Sbjct: 202 SVLIASGWIGFFYAVWLGTRGSLRLAKQSVSVVGSAISGNTISRHQHQD 240

The following BLAST results are available for this feature:

BLAST of MS018621 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022141354.1	7.5e-107	99.55	uncharacterized protein LOC111011773 [Momordica charantia]	[more]
XP_038906498.1	3.5e-88	84.30	uncharacterized protein LOC120092475 [Benincasa hispida]	[more]
XP_023514904.1	6.6e-87	82.06	uncharacterized protein LOC111779077 [Cucurbita pepo subsp. pepo]	[more]
XP_004140295.1	2.5e-86	82.96	uncharacterized protein LOC101212066 [Cucumis sativus] >KGN51068.1 hypothetical ...	[more]
KAG6602021.1	3.3e-86	81.61	hypothetical protein SDJN03_07254, partial [Cucurbita argyrosperma subsp. sorori...	[more]

BLAST of MS018621 vs. NCBI nr


Match Name	E-value	Identity	Description

BLAST of MS018621 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1CIE7	3.6e-107	99.55	uncharacterized protein LOC111011773 OS=Momordica charantia OX=3673 GN=LOC111011...	[more]
A0A0A0KNC3	1.2e-86	82.96	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G427940 PE=4 SV=1	[more]
A0A6J1E7P4	3.5e-86	81.17	uncharacterized protein LOC111430635 OS=Cucurbita moschata OX=3662 GN=LOC1114306...	[more]
A0A6J1JJZ4	4.6e-86	80.72	uncharacterized protein LOC111487608 OS=Cucurbita maxima OX=3661 GN=LOC111487608...	[more]
A0A5A7V6K3	9.7e-84	81.61	Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold...	[more]

BLAST of MS018621 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G16550.1	2.1e-46	53.28	unknown protein; Has 30201 Blast hits to 17322 proteins in 780 species: Archae -...	[more]

InterPro

Analysis Name: InterPro Annotations of Bitter gourd (TR) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..16
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..27
None	No IPR available	PANTHER	PTHR35508:SF1	VOLTAGE-DEPENDENT L-TYPE CALCIUM CHANNEL SUBUNIT	coord: 21..222
None	No IPR available	PANTHER	PTHR35508	VOLTAGE-DEPENDENT L-TYPE CALCIUM CHANNEL SUBUNIT	coord: 21..222

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
MS018621.1	MS018621.1	mRNA