MS018597 (gene) Bitter gourd (TR) v1

Overview


Name	MS018597
Type	gene
Organism	Momordica charantia cv. TR (Bitter gourd (TR) v1)
Description	60S ribosomal protein L30
Location	scaffold313: 203645 .. 203997 (+)
RNA-Seq Expression	MS018597
Synteny	MS018597

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

TCTGTGGTATTTTATTTGCAGAAGAAGACTCATGAGAGCATTAACAACAGGCTCGCCCTTGTGATGAAGAGCGGCAAGTACACACTGGGCTATAAAACCGTCCTACGCACTATTCGCAGCTCCAAAGGTATTCATCTGCCCGTATCATATGGTGTTTGATTAAAATTTAGGGTTTTTTTGTTTGTGTACTTTTGACACTTTCCGTTTTTCGATCTATTAAAAACACAGGGAAGCTTATAATCCTATCGAACAACTGCCCGCCGCTGCGTAAGTCTGAAATTGAGTACTACGCGATGCTTGCTAAAGTTGGGGTTCACCACTACAACGGAAGTAAGTGTAGTATAGACTCTGCT

mRNA sequence

TCTGTGGTATTTTATTTGCAGAAGAAGACTCATGAGAGCATTAACAACAGGCTCGCCCTTGTGATGAAGAGCGGCAAGTACACACTGGGCTATAAAACCGTCCTACGCACTATTCGCAGCTCCAAAGGGAAGCTTATAATCCTATCGAACAACTGCCCGCCGCTGCGTAAGTCTGAAATTGAGTACTACGCGATGCTTGCTAAAGTTGGGGTTCACCACTACAACGGAAGTAAGTGTAGTATAGACTCTGCT

Coding sequence (CDS)

TCTGTGGTATTTTATTTGCAGAAGAAGACTCATGAGAGCATTAACAACAGGCTCGCCCTTGTGATGAAGAGCGGCAAGTACACACTGGGCTATAAAACCGTCCTACGCACTATTCGCAGCTCCAAAGGGAAGCTTATAATCCTATCGAACAACTGCCCGCCGCTGCGTAAGTCTGAAATTGAGTACTACGCGATGCTTGCTAAAGTTGGGGTTCACCACTACAACGGAAGTAAGTGTAGTATAGACTCTGCT

Protein sequence

SVVFYLQKKTHESINNRLALVMKSGKYTLGYKTVLRTIRSSKGKLIILSNNCPPLRKSEIEYYAMLAKVGVHHYNGSKCSIDSA

Homology

[Close]

BLAST of MS018597 vs. NCBI nr
Match: KAF9848163.1 (hypothetical protein H0E87_002587 [Populus deltoides] >KAF9848164.1 hypothetical protein H0E87_002587 [Populus deltoides])

HSP 1 Score: 146.0 bits (367), Expect = 1.5e-31
Identity = 69/72 (95.83%), Postives = 72/72 (100.00%), Query Frame = 0


Query: 8  KKTHESINNRLALVMKSGKYTLGYKTVLRTIRSSKGKLIILSNNCPPLRKSEIEYYAMLA 67
          KKTHESINNRLALVMKSGKYTLGYKTVL+T+RSSKGKLI+LSNNCPPLRKSEIEYYAMLA
Sbjct: 8  KKTHESINNRLALVMKSGKYTLGYKTVLKTLRSSKGKLILLSNNCPPLRKSEIEYYAMLA 67

Query: 68 KVGVHHYNGSKC 80
          KVGVHHYNGSKC
Sbjct: 68 KVGVHHYNGSKC 79

[Close]

BLAST of MS018597 vs. NCBI nr
Match: KAG6602049.1 (60S ribosomal protein L30, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 145.2 bits (365), Expect = 2.5e-31
Identity = 71/77 (92.21%), Postives = 73/77 (94.81%), Query Frame = 0


Query: 8   KKTHESINNRLALVMKSGKYTLGYKTVLRTIRSSKGKLIILSNNCPPLRKSEIEYYAMLA 67
           KKTHESINNRLALVMKSGKYTLGYKTVLRTIRSSKGKLIILSNNCPPLRKSEIEYYAMLA
Sbjct: 41  KKTHESINNRLALVMKSGKYTLGYKTVLRTIRSSKGKLIILSNNCPPLRKSEIEYYAMLA 100

Query: 68  KVGVHHYNGSKCSIDSA 85
           KVGVHHYNGS   + +A
Sbjct: 101 KVGVHHYNGSNVDLGTA 117

[Close]

BLAST of MS018597 vs. NCBI nr
Match: XP_022952815.1 (60S ribosomal protein L30-like [Cucurbita moschata] >XP_023525455.1 60S ribosomal protein L30-like [Cucurbita pepo subsp. pepo] >KAG7032743.1 60S ribosomal protein L30 [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 145.2 bits (365), Expect = 2.5e-31
Identity = 71/77 (92.21%), Postives = 73/77 (94.81%), Query Frame = 0


Query: 8  KKTHESINNRLALVMKSGKYTLGYKTVLRTIRSSKGKLIILSNNCPPLRKSEIEYYAMLA 67
          KKTHESINNRLALVMKSGKYTLGYKTVLRTIRSSKGKLIILSNNCPPLRKSEIEYYAMLA
Sbjct: 8  KKTHESINNRLALVMKSGKYTLGYKTVLRTIRSSKGKLIILSNNCPPLRKSEIEYYAMLA 67

Query: 68 KVGVHHYNGSKCSIDSA 85
          KVGVHHYNGS   + +A
Sbjct: 68 KVGVHHYNGSNVDLGTA 84

[Close]

BLAST of MS018597 vs. NCBI nr
Match: XP_022141723.1 (60S ribosomal protein L30-like [Momordica charantia])

HSP 1 Score: 145.2 bits (365), Expect = 2.5e-31
Identity = 71/77 (92.21%), Postives = 73/77 (94.81%), Query Frame = 0


Query: 8  KKTHESINNRLALVMKSGKYTLGYKTVLRTIRSSKGKLIILSNNCPPLRKSEIEYYAMLA 67
          KKTHESINNRLALVMKSGKYTLGYKTVLRTIRSSKGKLIILSNNCPPLRKSEIEYYAMLA
Sbjct: 8  KKTHESINNRLALVMKSGKYTLGYKTVLRTIRSSKGKLIILSNNCPPLRKSEIEYYAMLA 67

Query: 68 KVGVHHYNGSKCSIDSA 85
          KVGVHHYNGS   + +A
Sbjct: 68 KVGVHHYNGSNVDLGTA 84

[Close]

BLAST of MS018597 vs. NCBI nr
Match: XP_008460497.1 (PREDICTED: 60S ribosomal protein L30-like [Cucumis melo] >XP_022939971.1 60S ribosomal protein L30-like [Cucurbita moschata] >XP_022992865.1 60S ribosomal protein L30-like [Cucurbita maxima] >XP_023549693.1 60S ribosomal protein L30-like [Cucurbita pepo subsp. pepo] >XP_023549694.1 60S ribosomal protein L30-like [Cucurbita pepo subsp. pepo] >XP_038906736.1 60S ribosomal protein L30-like [Benincasa hispida] >KAA0062391.1 60S ribosomal protein L30-like [Cucumis melo var. makuwa] >KAG6579016.1 60S ribosomal protein L30, partial [Cucurbita argyrosperma subsp. sororia] >KAG7016539.1 60S ribosomal protein L30 [Cucurbita argyrosperma subsp. argyrosperma] >TYK26589.1 60S ribosomal protein L30-like [Cucumis melo var. makuwa])

HSP 1 Score: 144.8 bits (364), Expect = 3.3e-31
Identity = 70/77 (90.91%), Postives = 73/77 (94.81%), Query Frame = 0


Query: 8  KKTHESINNRLALVMKSGKYTLGYKTVLRTIRSSKGKLIILSNNCPPLRKSEIEYYAMLA 67
          KKTHESINNRLALVMKSGKYTLGYKTVLRTIRSSKGKLIILSNNCPPLRKSEIEYYAMLA
Sbjct: 8  KKTHESINNRLALVMKSGKYTLGYKTVLRTIRSSKGKLIILSNNCPPLRKSEIEYYAMLA 67

Query: 68 KVGVHHYNGSKCSIDSA 85
          K+GVHHYNGS   + +A
Sbjct: 68 KIGVHHYNGSNVDLGTA 84

[Close]

BLAST of MS018597 vs. ExPASy Swiss-Prot
Match: O49884 (60S ribosomal protein L30 OS=Lupinus luteus OX=3873 GN=RPL30 PE=3 SV=1)

HSP 1 Score: 138.7 bits (348), Expect = 3.1e-32
Identity = 65/77 (84.42%), Postives = 73/77 (94.81%), Query Frame = 0


Query: 8  KKTHESINNRLALVMKSGKYTLGYKTVLRTIRSSKGKLIILSNNCPPLRKSEIEYYAMLA 67
          KKTHESINNRLALVMKSGKYTLGYKTVL+++RSSKGKLII++NNCPPLRKSEIEYYAMLA
Sbjct: 8  KKTHESINNRLALVMKSGKYTLGYKTVLKSLRSSKGKLIIIANNCPPLRKSEIEYYAMLA 67

Query: 68 KVGVHHYNGSKCSIDSA 85
          KVGVHHYNG+   + +A
Sbjct: 68 KVGVHHYNGNNVDLGTA 84

[Close]

BLAST of MS018597 vs. ExPASy Swiss-Prot
Match: Q9M5M6 (60S ribosomal protein L30 OS=Euphorbia esula OX=3993 GN=RPL30 PE=3 SV=1)

HSP 1 Score: 133.3 bits (334), Expect = 1.3e-30
Identity = 62/77 (80.52%), Postives = 72/77 (93.51%), Query Frame = 0


Query: 8  KKTHESINNRLALVMKSGKYTLGYKTVLRTIRSSKGKLIILSNNCPPLRKSEIEYYAMLA 67
          KKTHESIN+RLALVMKSGK+TLGYKTVL ++RS+KGKLII++NNCPPLRKSEIEYYAMLA
Sbjct: 8  KKTHESINSRLALVMKSGKFTLGYKTVLESLRSNKGKLIIIANNCPPLRKSEIEYYAMLA 67

Query: 68 KVGVHHYNGSKCSIDSA 85
          KVGVHHYNG+   + +A
Sbjct: 68 KVGVHHYNGNNVDLGTA 84

[Close]

BLAST of MS018597 vs. ExPASy Swiss-Prot
Match: Q8VZ19 (60S ribosomal protein L30-2 OS=Arabidopsis thaliana OX=3702 GN=RPL30B PE=3 SV=1)

HSP 1 Score: 127.5 bits (319), Expect = 7.2e-29
Identity = 58/77 (75.32%), Postives = 70/77 (90.91%), Query Frame = 0


Query: 8  KKTHESINNRLALVMKSGKYTLGYKTVLRTIRSSKGKLIILSNNCPPLRKSEIEYYAMLA 67
          KK+HE IN+RLALVMKSGKYTLGYK+VL+++R SKGKLI++S NCPPLR+SEIEYYAMLA
Sbjct: 8  KKSHEGINSRLALVMKSGKYTLGYKSVLKSLRGSKGKLILISTNCPPLRRSEIEYYAMLA 67

Query: 68 KVGVHHYNGSKCSIDSA 85
          KVGVHHYNG+   + +A
Sbjct: 68 KVGVHHYNGNNVDLGTA 84

[Close]

BLAST of MS018597 vs. ExPASy Swiss-Prot
Match: Q9C8F7 (Putative 60S ribosomal protein L30-1 OS=Arabidopsis thaliana OX=3702 GN=RPL30A PE=3 SV=1)

HSP 1 Score: 126.3 bits (316), Expect = 1.6e-28
Identity = 58/77 (75.32%), Postives = 71/77 (92.21%), Query Frame = 0


Query: 8  KKTHESINNRLALVMKSGKYTLGYKTVLRTIRSSKGKLIILSNNCPPLRKSEIEYYAMLA 67
          KK+HE IN+RLALVMKSGKYTLGYK+VL+++RSSKGKLI++S+NCPPLR+SEIEYYAMLA
Sbjct: 8  KKSHEGINSRLALVMKSGKYTLGYKSVLKSLRSSKGKLILISSNCPPLRRSEIEYYAMLA 67

Query: 68 KVGVHHYNGSKCSIDSA 85
          KVGVHHYN +   + +A
Sbjct: 68 KVGVHHYNRNNVDLGTA 84

[Close]

BLAST of MS018597 vs. ExPASy Swiss-Prot
Match: Q9LSA3 (60S ribosomal protein L30-3 OS=Arabidopsis thaliana OX=3702 GN=RPL30C PE=3 SV=1)

HSP 1 Score: 126.3 bits (316), Expect = 1.6e-28
Identity = 58/77 (75.32%), Postives = 71/77 (92.21%), Query Frame = 0


Query: 8  KKTHESINNRLALVMKSGKYTLGYKTVLRTIRSSKGKLIILSNNCPPLRKSEIEYYAMLA 67
          KK+HE IN+RLALVMKSGKYTLGYK+VL+++RSSKGKLI++S+NCPPLR+SEIEYYAMLA
Sbjct: 8  KKSHEGINSRLALVMKSGKYTLGYKSVLKSLRSSKGKLILISSNCPPLRRSEIEYYAMLA 67

Query: 68 KVGVHHYNGSKCSIDSA 85
          KVGVH YNG+   + +A
Sbjct: 68 KVGVHRYNGNNVDLGTA 84

[Close]

BLAST of MS018597 vs. ExPASy TrEMBL
Match: A0A6J1CLC5 (60S ribosomal protein L30-like OS=Momordica charantia OX=3673 GN=LOC111012013 PE=3 SV=1)

HSP 1 Score: 145.2 bits (365), Expect = 1.2e-31
Identity = 71/77 (92.21%), Postives = 73/77 (94.81%), Query Frame = 0


Query: 8  KKTHESINNRLALVMKSGKYTLGYKTVLRTIRSSKGKLIILSNNCPPLRKSEIEYYAMLA 67
          KKTHESINNRLALVMKSGKYTLGYKTVLRTIRSSKGKLIILSNNCPPLRKSEIEYYAMLA
Sbjct: 8  KKTHESINNRLALVMKSGKYTLGYKTVLRTIRSSKGKLIILSNNCPPLRKSEIEYYAMLA 67

Query: 68 KVGVHHYNGSKCSIDSA 85
          KVGVHHYNGS   + +A
Sbjct: 68 KVGVHHYNGSNVDLGTA 84

[Close]

BLAST of MS018597 vs. ExPASy TrEMBL
Match: A0A6J1GMT2 (60S ribosomal protein L30-like OS=Cucurbita moschata OX=3662 GN=LOC111455400 PE=3 SV=1)

HSP 1 Score: 145.2 bits (365), Expect = 1.2e-31
Identity = 71/77 (92.21%), Postives = 73/77 (94.81%), Query Frame = 0


Query: 8  KKTHESINNRLALVMKSGKYTLGYKTVLRTIRSSKGKLIILSNNCPPLRKSEIEYYAMLA 67
          KKTHESINNRLALVMKSGKYTLGYKTVLRTIRSSKGKLIILSNNCPPLRKSEIEYYAMLA
Sbjct: 8  KKTHESINNRLALVMKSGKYTLGYKTVLRTIRSSKGKLIILSNNCPPLRKSEIEYYAMLA 67

Query: 68 KVGVHHYNGSKCSIDSA 85
          KVGVHHYNGS   + +A
Sbjct: 68 KVGVHHYNGSNVDLGTA 84

[Close]

BLAST of MS018597 vs. ExPASy TrEMBL
Match: A0A5D3DSZ7 (60S ribosomal protein L30-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold313G002180 PE=3 SV=1)

HSP 1 Score: 144.8 bits (364), Expect = 1.6e-31
Identity = 70/77 (90.91%), Postives = 73/77 (94.81%), Query Frame = 0


Query: 8  KKTHESINNRLALVMKSGKYTLGYKTVLRTIRSSKGKLIILSNNCPPLRKSEIEYYAMLA 67
          KKTHESINNRLALVMKSGKYTLGYKTVLRTIRSSKGKLIILSNNCPPLRKSEIEYYAMLA
Sbjct: 8  KKTHESINNRLALVMKSGKYTLGYKTVLRTIRSSKGKLIILSNNCPPLRKSEIEYYAMLA 67

Query: 68 KVGVHHYNGSKCSIDSA 85
          K+GVHHYNGS   + +A
Sbjct: 68 KIGVHHYNGSNVDLGTA 84

[Close]

BLAST of MS018597 vs. ExPASy TrEMBL
Match: A0A6J1JWW8 (60S ribosomal protein L30-like OS=Cucurbita maxima OX=3661 GN=LOC111489070 PE=3 SV=1)

HSP 1 Score: 144.8 bits (364), Expect = 1.6e-31
Identity = 70/77 (90.91%), Postives = 73/77 (94.81%), Query Frame = 0


Query: 8  KKTHESINNRLALVMKSGKYTLGYKTVLRTIRSSKGKLIILSNNCPPLRKSEIEYYAMLA 67
          KKTHESINNRLALVMKSGKYTLGYKTVLRTIRSSKGKLIILSNNCPPLRKSEIEYYAMLA
Sbjct: 8  KKTHESINNRLALVMKSGKYTLGYKTVLRTIRSSKGKLIILSNNCPPLRKSEIEYYAMLA 67

Query: 68 KVGVHHYNGSKCSIDSA 85
          K+GVHHYNGS   + +A
Sbjct: 68 KIGVHHYNGSNVDLGTA 84

[Close]

BLAST of MS018597 vs. ExPASy TrEMBL
Match: A0A6J1FH91 (60S ribosomal protein L30-like OS=Cucurbita moschata OX=3662 GN=LOC111445673 PE=3 SV=1)

HSP 1 Score: 144.8 bits (364), Expect = 1.6e-31
Identity = 70/77 (90.91%), Postives = 73/77 (94.81%), Query Frame = 0


Query: 8  KKTHESINNRLALVMKSGKYTLGYKTVLRTIRSSKGKLIILSNNCPPLRKSEIEYYAMLA 67
          KKTHESINNRLALVMKSGKYTLGYKTVLRTIRSSKGKLIILSNNCPPLRKSEIEYYAMLA
Sbjct: 8  KKTHESINNRLALVMKSGKYTLGYKTVLRTIRSSKGKLIILSNNCPPLRKSEIEYYAMLA 67

Query: 68 KVGVHHYNGSKCSIDSA 85
          K+GVHHYNGS   + +A
Sbjct: 68 KIGVHHYNGSNVDLGTA 84

[Close]

BLAST of MS018597 vs. TAIR 10
Match: AT1G77940.1 (Ribosomal protein L7Ae/L30e/S12e/Gadd45 family protein )

HSP 1 Score: 127.5 bits (319), Expect = 5.1e-30
Identity = 58/77 (75.32%), Postives = 70/77 (90.91%), Query Frame = 0


Query: 8  KKTHESINNRLALVMKSGKYTLGYKTVLRTIRSSKGKLIILSNNCPPLRKSEIEYYAMLA 67
          KK+HE IN+RLALVMKSGKYTLGYK+VL+++R SKGKLI++S NCPPLR+SEIEYYAMLA
Sbjct: 8  KKSHEGINSRLALVMKSGKYTLGYKSVLKSLRGSKGKLILISTNCPPLRRSEIEYYAMLA 67

Query: 68 KVGVHHYNGSKCSIDSA 85
          KVGVHHYNG+   + +A
Sbjct: 68 KVGVHHYNGNNVDLGTA 84

[Close]

BLAST of MS018597 vs. TAIR 10
Match: AT1G36240.1 (Ribosomal protein L7Ae/L30e/S12e/Gadd45 family protein )

HSP 1 Score: 126.3 bits (316), Expect = 1.1e-29
Identity = 58/77 (75.32%), Postives = 71/77 (92.21%), Query Frame = 0


Query: 8  KKTHESINNRLALVMKSGKYTLGYKTVLRTIRSSKGKLIILSNNCPPLRKSEIEYYAMLA 67
          KK+HE IN+RLALVMKSGKYTLGYK+VL+++RSSKGKLI++S+NCPPLR+SEIEYYAMLA
Sbjct: 8  KKSHEGINSRLALVMKSGKYTLGYKSVLKSLRSSKGKLILISSNCPPLRRSEIEYYAMLA 67

Query: 68 KVGVHHYNGSKCSIDSA 85
          KVGVHHYN +   + +A
Sbjct: 68 KVGVHHYNRNNVDLGTA 84

[Close]

BLAST of MS018597 vs. TAIR 10
Match: AT3G18740.1 (Ribosomal protein L7Ae/L30e/S12e/Gadd45 family protein )

HSP 1 Score: 126.3 bits (316), Expect = 1.1e-29
Identity = 58/77 (75.32%), Postives = 71/77 (92.21%), Query Frame = 0


Query: 8  KKTHESINNRLALVMKSGKYTLGYKTVLRTIRSSKGKLIILSNNCPPLRKSEIEYYAMLA 67
          KK+HE IN+RLALVMKSGKYTLGYK+VL+++RSSKGKLI++S+NCPPLR+SEIEYYAMLA
Sbjct: 8  KKSHEGINSRLALVMKSGKYTLGYKSVLKSLRSSKGKLILISSNCPPLRRSEIEYYAMLA 67

Query: 68 KVGVHHYNGSKCSIDSA 85
          KVGVH YNG+   + +A
Sbjct: 68 KVGVHRYNGNNVDLGTA 84

The following BLAST results are available for this feature:

BLAST of MS018597 vs. NCBI nr


Match Name	E-value	Identity	Description
KAF9848163.1	1.5e-31	95.83	hypothetical protein H0E87_002587 [Populus deltoides] >KAF9848164.1 hypothetical...	[more]
KAG6602049.1	2.5e-31	92.21	60S ribosomal protein L30, partial [Cucurbita argyrosperma subsp. sororia]	[more]
XP_022952815.1	2.5e-31	92.21	60S ribosomal protein L30-like [Cucurbita moschata] >XP_023525455.1 60S ribosoma...	[more]
XP_022141723.1	2.5e-31	92.21	60S ribosomal protein L30-like [Momordica charantia]	[more]
XP_008460497.1	3.3e-31	90.91	PREDICTED: 60S ribosomal protein L30-like [Cucumis melo] >XP_022939971.1 60S rib...	[more]

BLAST of MS018597 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
O49884	3.1e-32	84.42	60S ribosomal protein L30 OS=Lupinus luteus OX=3873 GN=RPL30 PE=3 SV=1	[more]
Q9M5M6	1.3e-30	80.52	60S ribosomal protein L30 OS=Euphorbia esula OX=3993 GN=RPL30 PE=3 SV=1	[more]
Q8VZ19	7.2e-29	75.32	60S ribosomal protein L30-2 OS=Arabidopsis thaliana OX=3702 GN=RPL30B PE=3 SV=1	[more]
Q9C8F7	1.6e-28	75.32	Putative 60S ribosomal protein L30-1 OS=Arabidopsis thaliana OX=3702 GN=RPL30A P...	[more]
Q9LSA3	1.6e-28	75.32	60S ribosomal protein L30-3 OS=Arabidopsis thaliana OX=3702 GN=RPL30C PE=3 SV=1	[more]

BLAST of MS018597 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1CLC5	1.2e-31	92.21	60S ribosomal protein L30-like OS=Momordica charantia OX=3673 GN=LOC111012013 PE...	[more]
A0A6J1GMT2	1.2e-31	92.21	60S ribosomal protein L30-like OS=Cucurbita moschata OX=3662 GN=LOC111455400 PE=...	[more]
A0A5D3DSZ7	1.6e-31	90.91	60S ribosomal protein L30-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_s...	[more]
A0A6J1JWW8	1.6e-31	90.91	60S ribosomal protein L30-like OS=Cucurbita maxima OX=3661 GN=LOC111489070 PE=3 ...	[more]
A0A6J1FH91	1.6e-31	90.91	60S ribosomal protein L30-like OS=Cucurbita moschata OX=3662 GN=LOC111445673 PE=...	[more]

BLAST of MS018597 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G77940.1	5.1e-30	75.32	Ribosomal protein L7Ae/L30e/S12e/Gadd45 family protein	[more]
AT1G36240.1	1.1e-29	75.32	Ribosomal protein L7Ae/L30e/S12e/Gadd45 family protein	[more]
AT3G18740.1	1.1e-29	75.32	Ribosomal protein L7Ae/L30e/S12e/Gadd45 family protein	[more]

InterPro

Analysis Name: InterPro Annotations of Bitter gourd (TR) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR004038	Ribosomal protein L7Ae/L30e/S12e/Gadd45	PFAM	PF01248	Ribosomal_L7Ae	coord: 13..76 e-value: 8.6E-14 score: 51.0
IPR029064	50S ribosomal protein L30e-like	GENE3D	3.30.1330.30		coord: 6..84 e-value: 1.8E-33 score: 116.4
IPR029064	50S ribosomal protein L30e-like	SUPERFAMILY	55315	L30e-like	coord: 13..79
None	No IPR available	PANTHER	PTHR11449:SF25	60S RIBOSOMAL PROTEIN L30-1-RELATED	coord: 7..82
IPR039109	Ribosomal protein L30/YlxQ	PANTHER	PTHR11449	RIBOSOMAL PROTEIN L30	coord: 7..82
IPR022991	Ribosomal protein L30e, conserved site	PROSITE	PS00709	RIBOSOMAL_L30E_1	coord: 24..48

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
MS018597.1	MS018597.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
molecular_function	GO:0003723	RNA binding