Sequences
The following sequences are available for this feature:
Gene sequence (with intron)
Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
CAGCAAAATCAAAAGATGGAGGGCCACAAATCAGACACCAACAAAACGAATCCCCGAAAGGATGGAGTAATCATCACTGTGTACGTTGAATCCCCCAAATCGCATAACAATTCCCATCAAAACAGGGATGCCAATGCCCTCAACAAAATTAACCCCAAATCCAGAGGCAGAGGCTACGACCGCCGGGCCCAGCTCCTCGCATACTCTCGCGACCTCAGAAACCTCGATTCTCCTCTCAAACCCAAGGTCTGTCTCCGTCTCTGCCTCTGTGTTGCTTCGTTTTAATTTCATTTTTGAGTAGGAATTGAAAAGATCGATAAATTAAAATGCTGCGTACGTACAGAAATGGAAACTGAAGGTGAGATCGGAGACACGGTATGAACGGGTGGGGATGGGGAGAGAGGAGAGAGCAGAGGTGGTGGATCAGCGATGCCGCCCCAAATGCTTCTGCTTCCAAAGCAGGACAAAGAAAGCCACTGGGAAATCGGGTTCTTCCATATTGGTAAATTTCCGGCCGGGAAATGAATACCCACTTGATCAGTTTTTTTGTTTTGTTTTTGACGAGTTGGTTAATGGGTGTTGCGTTTGTGTTGCAGATGAAAATGAAGAGTTTGTTGAGAGAGTTATCAAAGGGGTGTAAACGCAGGAGTGATGAT
mRNA sequence
CAGCAAAATCAAAAGATGGAGGGCCACAAATCAGACACCAACAAAACGAATCCCCGAAAGGATGGAGTAATCATCACTGTGTACGTTGAATCCCCCAAATCGCATAACAATTCCCATCAAAACAGGGATGCCAATGCCCTCAACAAAATTAACCCCAAATCCAGAGGCAGAGGCTACGACCGCCGGGCCCAGCTCCTCGCATACTCTCGCGACCTCAGAAACCTCGATTCTCCTCTCAAACCCAAGAAATGGAAACTGAAGGTGAGATCGGAGACACGGTATGAACGGGTGGGGATGGGGAGAGAGGAGAGAGCAGAGGTGGTGGATCAGCGATGCCGCCCCAAATGCTTCTGCTTCCAAAGCAGGACAAAGAAAGCCACTGGGAAATCGGGTTCTTCCATATTGATGAAAATGAAGAGTTTGTTGAGAGAGTTATCAAAGGGGTGTAAACGCAGGAGTGATGAT
Coding sequence (CDS)
CAGCAAAATCAAAAGATGGAGGGCCACAAATCAGACACCAACAAAACGAATCCCCGAAAGGATGGAGTAATCATCACTGTGTACGTTGAATCCCCCAAATCGCATAACAATTCCCATCAAAACAGGGATGCCAATGCCCTCAACAAAATTAACCCCAAATCCAGAGGCAGAGGCTACGACCGCCGGGCCCAGCTCCTCGCATACTCTCGCGACCTCAGAAACCTCGATTCTCCTCTCAAACCCAAGAAATGGAAACTGAAGGTGAGATCGGAGACACGGTATGAACGGGTGGGGATGGGGAGAGAGGAGAGAGCAGAGGTGGTGGATCAGCGATGCCGCCCCAAATGCTTCTGCTTCCAAAGCAGGACAAAGAAAGCCACTGGGAAATCGGGTTCTTCCATATTGATGAAAATGAAGAGTTTGTTGAGAGAGTTATCAAAGGGGTGTAAACGCAGGAGTGATGAT
Protein sequence
QQNQKMEGHKSDTNKTNPRKDGVIITVYVESPKSHNNSHQNRDANALNKINPKSRGRGYDRRAQLLAYSRDLRNLDSPLKPKKWKLKVRSETRYERVGMGREERAEVVDQRCRPKCFCFQSRTKKATGKSGSSILMKMKSLLRELSKGCKRRSDD
Homology
BLAST of MS018577 vs. NCBI nr
Match:
XP_022141611.1 (uncharacterized protein LOC111011926 [Momordica charantia])
HSP 1 Score: 305.4 bits (781), Expect = 2.7e-79
Identity = 154/155 (99.35%), Postives = 155/155 (100.00%), Query Frame = 0
Query: 1 QQNQKMEGHKSDTNKTNPRKDGVIITVYVESPKSHNNSHQNRDANALNKINPKSRGRGYD 60
QQNQKMEGHKSDTNKTNPRKDGVIITVYVESPKSHNNSHQNRDANALNKINPKSRGRGYD
Sbjct: 48 QQNQKMEGHKSDTNKTNPRKDGVIITVYVESPKSHNNSHQNRDANALNKINPKSRGRGYD 107
Query: 61 RRAQLLAYSRDLRNLDSPLKPKKWKLKVRSETRYERVGMGREERAEVVDQRCRPKCFCFQ 120
RRAQLLAYSRDLRNLDSPLKPKKWKLKVRSETRYERVGMGRE+RAEVVDQRCRPKCFCFQ
Sbjct: 108 RRAQLLAYSRDLRNLDSPLKPKKWKLKVRSETRYERVGMGREDRAEVVDQRCRPKCFCFQ 167
Query: 121 SRTKKATGKSGSSILMKMKSLLRELSKGCKRRSDD 156
SRTKKATGKSGSSILMKMKSLLRELSKGCKRRSDD
Sbjct: 168 SRTKKATGKSGSSILMKMKSLLRELSKGCKRRSDD 202
BLAST of MS018577 vs. NCBI nr
Match:
XP_038874461.1 (uncharacterized protein LOC120067113 [Benincasa hispida])
HSP 1 Score: 141.0 bits (354), Expect = 8.8e-30
Identity = 97/177 (54.80%), Postives = 114/177 (64.41%), Query Frame = 0
Query: 3 NQKMEGHKSDTNKTNPRKDGVIITVYVESPK-SHNNSHQ-----NRDANALNKINPKS-R 62
+QKM+ H ++ N+T P+K GVIITVYVESPK NNSH+ + + N N PK+
Sbjct: 54 SQKMQTH-TNNNQTIPQKQGVIITVYVESPKLQDNNSHKPPIIPHNNINNPNSALPKTPN 113
Query: 63 GRGYDRRAQLLAYSRDLRNLDSPL------KPKKWKLKVRSET---------------RY 122
GYDRRAQLLAYSR LRN +S L + KKWK +VRSE RY
Sbjct: 114 STGYDRRAQLLAYSRHLRNQNSSLSQSSKTESKKWKWRVRSEAPAVRRMPSRRALQRWRY 173
Query: 123 ERVGMGREERAEVVDQRCRPKCFCFQSRTKKATGKSGSSILMKMKSLLRELSKGCKR 152
ERVGM REE EVVDQ CRPKCF +S +KK+T KSGSSI K+KSLL ELS GCKR
Sbjct: 174 ERVGMMREETTEVVDQPCRPKCFGGKS-SKKSTVKSGSSIFRKLKSLLGELSNGCKR 228
BLAST of MS018577 vs. NCBI nr
Match:
XP_008460454.1 (PREDICTED: uncharacterized protein LOC103499268 [Cucumis melo])
HSP 1 Score: 141.0 bits (354), Expect = 8.8e-30
Identity = 98/184 (53.26%), Postives = 114/184 (61.96%), Query Frame = 0
Query: 2 QNQKMEGHKSDTNKTNPRKDGVIITVYVESPKSHN-NSHQNR--DANALNKINPK----- 61
Q+++M+ H ++ +T P+K VIITVYVESPK N NSH+ + N N INPK
Sbjct: 39 QSREMQSH-TNNYQTLPKKQEVIITVYVESPKLQNSNSHKTQIIPHNNNNHINPKPSLPK 98
Query: 62 -SRGRGYDRRAQLLAYSRDLRNLDS------PLKPKKWKLKVRSET-------------- 121
GYDRRAQLLAYSR LRN+ S K KKWK KVRSE
Sbjct: 99 TPNSTGYDRRAQLLAYSRHLRNVHSSNTQSPQPKSKKWKWKVRSEAPTVRRMPSRRALQR 158
Query: 122 -RYERVGMGREERAEVVDQRCRPKCFCFQSRTKKATGKSGSSILMKMKSLLRELSKGCKR 156
RYERVGM REER EVVDQ CRPKC +S KK+T +SGSSI K+KSLL ELSKGCKR
Sbjct: 159 WRYERVGMMREERTEVVDQPCRPKCLGGRS-NKKSTSRSGSSIFRKLKSLLGELSKGCKR 218
BLAST of MS018577 vs. NCBI nr
Match:
XP_004140323.1 (uncharacterized protein LOC101218772 [Cucumis sativus] >KGN50983.1 hypothetical protein Csa_008362 [Cucumis sativus])
HSP 1 Score: 136.7 bits (343), Expect = 1.7e-28
Identity = 91/184 (49.46%), Postives = 111/184 (60.33%), Query Frame = 0
Query: 2 QNQKMEGHKSDTNKTNPRKDGVIITVYVESPKSHNNS---------HQNRDANALNKINP 61
Q+++M+ H ++ +T P+K VIITVYVESPK N++ + N ++N +
Sbjct: 2 QSREMQSH-TNNYQTLPKKQEVIITVYVESPKLQNSNPHKTPIVPHNNNNNSNPKPSLRK 61
Query: 62 KSRGRGYDRRAQLLAYSRDLRNLDS------PLKPKKWKLKVRSET-------------- 121
GYDRRAQLLAYSR LRN+ S K KKWK KVRSE
Sbjct: 62 TPNSTGYDRRAQLLAYSRHLRNVHSSNTQSPKPKSKKWKWKVRSEAPTVRRMPSRRALQR 121
Query: 122 -RYERVGMGREERAEVVDQRCRPKCFCFQSRTKKATGKSGSSILMKMKSLLRELSKGCKR 156
RYERVGM REER EVVDQ CRPKC +S KK+T +SGSSI K+KSLL ELSKGCKR
Sbjct: 122 WRYERVGMMREERTEVVDQPCRPKCLGGRS-NKKSTSRSGSSIFRKLKSLLGELSKGCKR 181
BLAST of MS018577 vs. NCBI nr
Match:
XP_023546181.1 (uncharacterized protein LOC111805357 [Cucurbita pepo subsp. pepo])
HSP 1 Score: 127.5 bits (319), Expect = 1.0e-25
Identity = 83/160 (51.88%), Postives = 103/160 (64.38%), Query Frame = 0
Query: 15 KTNPRKDGVIITVYVESP-KSHNNSHQNR---DANALNKINPKS-RGRGYDRRAQLLAYS 74
K P K+ VIITVYVESP K N SHQN + N+ +PK+ + RGYDRRA+LLAYS
Sbjct: 11 KAIPPKERVIITVYVESPRKQSNKSHQNPISINKNSHPNAHPKAPKSRGYDRRAELLAYS 70
Query: 75 RDLRNLDS-----PLKPKKWKLKVRS-------------ETRYERVGMGREERAEVVDQR 134
R+LRN+DS P KW++K + + RYERVGM REER EVV+QR
Sbjct: 71 RELRNVDSGTTHLPKTKSKWRVKSETAAVRRIPSKRGLRQGRYERVGMTREERTEVVEQR 130
Query: 135 CRPKCFCFQSRTKKATGKSGSSILMKMKSLLRELSKGCKR 152
C PK CF K+++G+ GSSIL K+KSL+ LSKGCKR
Sbjct: 131 CLPK--CFNGDDKRSSGRLGSSILRKLKSLMGGLSKGCKR 168
BLAST of MS018577 vs. ExPASy TrEMBL
Match:
A0A6J1CJQ0 (uncharacterized protein LOC111011926 OS=Momordica charantia OX=3673 GN=LOC111011926 PE=4 SV=1)
HSP 1 Score: 305.4 bits (781), Expect = 1.3e-79
Identity = 154/155 (99.35%), Postives = 155/155 (100.00%), Query Frame = 0
Query: 1 QQNQKMEGHKSDTNKTNPRKDGVIITVYVESPKSHNNSHQNRDANALNKINPKSRGRGYD 60
QQNQKMEGHKSDTNKTNPRKDGVIITVYVESPKSHNNSHQNRDANALNKINPKSRGRGYD
Sbjct: 48 QQNQKMEGHKSDTNKTNPRKDGVIITVYVESPKSHNNSHQNRDANALNKINPKSRGRGYD 107
Query: 61 RRAQLLAYSRDLRNLDSPLKPKKWKLKVRSETRYERVGMGREERAEVVDQRCRPKCFCFQ 120
RRAQLLAYSRDLRNLDSPLKPKKWKLKVRSETRYERVGMGRE+RAEVVDQRCRPKCFCFQ
Sbjct: 108 RRAQLLAYSRDLRNLDSPLKPKKWKLKVRSETRYERVGMGREDRAEVVDQRCRPKCFCFQ 167
Query: 121 SRTKKATGKSGSSILMKMKSLLRELSKGCKRRSDD 156
SRTKKATGKSGSSILMKMKSLLRELSKGCKRRSDD
Sbjct: 168 SRTKKATGKSGSSILMKMKSLLRELSKGCKRRSDD 202
BLAST of MS018577 vs. ExPASy TrEMBL
Match:
A0A1S3CDS3 (uncharacterized protein LOC103499268 OS=Cucumis melo OX=3656 GN=LOC103499268 PE=4 SV=1)
HSP 1 Score: 141.0 bits (354), Expect = 4.3e-30
Identity = 98/184 (53.26%), Postives = 114/184 (61.96%), Query Frame = 0
Query: 2 QNQKMEGHKSDTNKTNPRKDGVIITVYVESPKSHN-NSHQNR--DANALNKINPK----- 61
Q+++M+ H ++ +T P+K VIITVYVESPK N NSH+ + N N INPK
Sbjct: 39 QSREMQSH-TNNYQTLPKKQEVIITVYVESPKLQNSNSHKTQIIPHNNNNHINPKPSLPK 98
Query: 62 -SRGRGYDRRAQLLAYSRDLRNLDS------PLKPKKWKLKVRSET-------------- 121
GYDRRAQLLAYSR LRN+ S K KKWK KVRSE
Sbjct: 99 TPNSTGYDRRAQLLAYSRHLRNVHSSNTQSPQPKSKKWKWKVRSEAPTVRRMPSRRALQR 158
Query: 122 -RYERVGMGREERAEVVDQRCRPKCFCFQSRTKKATGKSGSSILMKMKSLLRELSKGCKR 156
RYERVGM REER EVVDQ CRPKC +S KK+T +SGSSI K+KSLL ELSKGCKR
Sbjct: 159 WRYERVGMMREERTEVVDQPCRPKCLGGRS-NKKSTSRSGSSIFRKLKSLLGELSKGCKR 218
BLAST of MS018577 vs. ExPASy TrEMBL
Match:
A0A0A0KN34 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G385350 PE=4 SV=1)
HSP 1 Score: 136.7 bits (343), Expect = 8.1e-29
Identity = 91/184 (49.46%), Postives = 111/184 (60.33%), Query Frame = 0
Query: 2 QNQKMEGHKSDTNKTNPRKDGVIITVYVESPKSHNNS---------HQNRDANALNKINP 61
Q+++M+ H ++ +T P+K VIITVYVESPK N++ + N ++N +
Sbjct: 2 QSREMQSH-TNNYQTLPKKQEVIITVYVESPKLQNSNPHKTPIVPHNNNNNSNPKPSLRK 61
Query: 62 KSRGRGYDRRAQLLAYSRDLRNLDS------PLKPKKWKLKVRSET-------------- 121
GYDRRAQLLAYSR LRN+ S K KKWK KVRSE
Sbjct: 62 TPNSTGYDRRAQLLAYSRHLRNVHSSNTQSPKPKSKKWKWKVRSEAPTVRRMPSRRALQR 121
Query: 122 -RYERVGMGREERAEVVDQRCRPKCFCFQSRTKKATGKSGSSILMKMKSLLRELSKGCKR 156
RYERVGM REER EVVDQ CRPKC +S KK+T +SGSSI K+KSLL ELSKGCKR
Sbjct: 122 WRYERVGMMREERTEVVDQPCRPKCLGGRS-NKKSTSRSGSSIFRKLKSLLGELSKGCKR 181
BLAST of MS018577 vs. ExPASy TrEMBL
Match:
A0A6J1JSH9 (uncharacterized protein LOC111487148 OS=Cucurbita maxima OX=3661 GN=LOC111487148 PE=4 SV=1)
HSP 1 Score: 126.3 bits (316), Expect = 1.1e-25
Identity = 86/160 (53.75%), Postives = 103/160 (64.38%), Query Frame = 0
Query: 15 KTNPRKDGVIITVYVESP-KSHNNSHQNR---DANALNKINPK-SRGRGYDRRAQLLAYS 74
K P K+ VIITVYVESP K N SHQN + N+ PK ++ RGYDRRA+LLAYS
Sbjct: 11 KAIPPKERVIITVYVESPRKQSNKSHQNPISINKNSHPNAPPKATKSRGYDRRAELLAYS 70
Query: 75 RDLRNLDSP---LKPKKWKLKVRSET---------------RYERVGMGREERAEVVDQR 134
R+LRN+DS L K K +V+SET RYERVGM REER EVV+QR
Sbjct: 71 RELRNVDSATTHLPKTKSKWRVKSETAAVRRIPSRRGLRQGRYERVGMMREERTEVVEQR 130
Query: 135 CRPKCFCFQSRTKKATGKSGSSILMKMKSLLRELSKGCKR 152
C PK CF K+++G+ GSSIL K+KSL+ LSKGCKR
Sbjct: 131 CLPK--CFNGDDKRSSGRLGSSILRKLKSLMGGLSKGCKR 168
BLAST of MS018577 vs. ExPASy TrEMBL
Match:
A0A6J1HCQ4 (uncharacterized protein LOC111462789 OS=Cucurbita moschata OX=3662 GN=LOC111462789 PE=4 SV=1)
HSP 1 Score: 124.8 bits (312), Expect = 3.2e-25
Identity = 85/160 (53.12%), Postives = 103/160 (64.38%), Query Frame = 0
Query: 15 KTNPRKDGVIITVYVESP-KSHNNSHQNR---DANALNKINPKS-RGRGYDRRAQLLAYS 74
K P K+ VIITVYVESP K N SHQN + N+ +PK+ + RGYDRRA+LLAYS
Sbjct: 11 KAIPPKERVIITVYVESPRKQSNKSHQNPISINKNSHPNAHPKAPKSRGYDRRAELLAYS 70
Query: 75 RDLRNLDSP---LKPKKWKLKVRSET---------------RYERVGMGREERAEVVDQR 134
R+LRN+DS L K K +V+SET RYERVGM REER EVV+QR
Sbjct: 71 RELRNVDSATTHLPKTKSKWRVKSETAAVRRLPSRRGLRQGRYERVGMMREERTEVVEQR 130
Query: 135 CRPKCFCFQSRTKKATGKSGSSILMKMKSLLRELSKGCKR 152
C PK CF K+++G+ GSSIL K+KSL+ LS GCKR
Sbjct: 131 CLPK--CFNGDYKRSSGRLGSSILRKLKSLMGGLSMGCKR 168
The following BLAST results are available for this feature:
Match Name | E-value | Identity | Description | |
XP_022141611.1 | 2.7e-79 | 99.35 | uncharacterized protein LOC111011926 [Momordica charantia] | [more] |
XP_038874461.1 | 8.8e-30 | 54.80 | uncharacterized protein LOC120067113 [Benincasa hispida] | [more] |
XP_008460454.1 | 8.8e-30 | 53.26 | PREDICTED: uncharacterized protein LOC103499268 [Cucumis melo] | [more] |
XP_004140323.1 | 1.7e-28 | 49.46 | uncharacterized protein LOC101218772 [Cucumis sativus] >KGN50983.1 hypothetical ... | [more] |
XP_023546181.1 | 1.0e-25 | 51.88 | uncharacterized protein LOC111805357 [Cucurbita pepo subsp. pepo] | [more] |
Match Name | E-value | Identity | Description | |
Match Name | E-value | Identity | Description | |
A0A6J1CJQ0 | 1.3e-79 | 99.35 | uncharacterized protein LOC111011926 OS=Momordica charantia OX=3673 GN=LOC111011... | [more] |
A0A1S3CDS3 | 4.3e-30 | 53.26 | uncharacterized protein LOC103499268 OS=Cucumis melo OX=3656 GN=LOC103499268 PE=... | [more] |
A0A0A0KN34 | 8.1e-29 | 49.46 | Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G385350 PE=4 SV=1 | [more] |
A0A6J1JSH9 | 1.1e-25 | 53.75 | uncharacterized protein LOC111487148 OS=Cucurbita maxima OX=3661 GN=LOC111487148... | [more] |
A0A6J1HCQ4 | 3.2e-25 | 53.13 | uncharacterized protein LOC111462789 OS=Cucurbita moschata OX=3662 GN=LOC1114627... | [more] |
Match Name | E-value | Identity | Description | |