MS018403 (gene) Bitter gourd (TR) v1

Overview


Name	MS018403
Type	gene
Organism	Momordica charantia cv. TR (Bitter gourd (TR) v1)
Description	Unknown protein
Location	scaffold342: 690606 .. 693249 (+)
RNA-Seq Expression	MS018403
Synteny	MS018403

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCTGCCGACGACCTCGAGCTTGCTGTAGAAGAAGCAATGCCATGGCTTCCGAGTCAAGTTCTCGACGAGGCTTGCGATATCAAGGTTCTACTTCTAATTCTACTTCTTCATCCATCGATAAATCGATCCATAGATCGCCTGATCTCTTTTAAATTTCAGGTGTATATGCGGCAACAACAGCAGAAGCCTTACCTCCACCGGCAACGGCGCCATGATCGTCCTCTGTCATCGCCGCCGTCGGATCATTTCGCGCTTCCACCGGTACGCTACTGCATTTCGATTGCGATTCCGATGTTAATTCGTTTGTGAAGCTAGCTAGCGCCCTAAGTTATGTTGATTCTCATTTTGTTTTGATTCGGTGAATTAAATCGAATTAGCATCAGAAATCGAAGTACGGTAATGTCTCTGCTCGGCCGCATCAGAGGCAGAAATCGGCGGCCAATTGGACGGCCGGAGGACCTGGAATGCAAGCGATTTTCCTCGACTCCGGCCGGCAATTAGGCGGCACCGGCGTTTTTCTTCCTCGAGGAGCAGCCACTGGTTACCAACCAAACAAGAAGCCAGGTAGGGATTTCTGATTATATTCTTTTTAACATCTATTTAATCAATAATACTTCCGTCCAGAGATTTAGAAAATAAAGCAAACAAGAAAGAACTCTGCCTTCGTGCGTACCTGTTTCTCCCTCTCTCTCTCTCTCTCTTCAATCAATTTACAGAAGAGAGAGAGAGAGTTTTTTTTTTTCTTTTTTTTTTAAGAGAAATTTGGCAATTTGCCTTTTGTTTGCACGATGTGCAACTCTTTGTAATTTTAATTAATTAAAACTAAATATGGTTGATCAAATTAAATTGAGATTCTGATAACAAGATACATTCTGAATACATGACATAATTATTAAATTAATGAAATTCAACGAATTAAGAATATAACAAAAAATTTAAATCCAACAAATTTGCTATTTGGCGGAACTCAAAATAGAAAAAAAAAAAAAAAGATTCTATTTATNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTTAAATGAGATTATGGTCATGGTTTACACGTATCTTAAAAATATATATTAAAAAAAACAACCTACCATTTATACAAGTGCTTTTGTGTTATTAATAAATATCAATGAACTCTTGCCATATAAAGTCATATTACTATATTTGATAGATTTAGGATGTGTTTGGAACTTGGAAGCGGAAATCTTGTTTTATAGTNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNCTTTTTTTTTTTTTTTTTTTAAGTTTTAATATGTTTTCTTTTCATCTTTTGTTGAATTATTTACTTTTCATATATAATCTGATTATTTTTTAAGTGTAGTTTGATTCAAATGTAGTATGTTTTTAAATTAGTGTGAAGAAGGAAACAGTTTTTAAAGATTAATCTATATAAAAAAATTTTGAAAATATAATTTTAAGTTTCTGAATTATGATCCTAACTTTGTCACCTTGATTTCTAATTTTGGATTAATAAATTGTGAATCTATTTGTAGTTTGCTCCATCGTTCTTCTCCCTGCTCGTGTTGTTCAAGCTCTTAATCTCGACGTTCAAGCATTAGGATTTCAAATTTCTCCTCGAAAAGGTATGATGATATATTTTCAATAAAATGTTACTTTTTTAGTTCAAATCTTAGGTTGTACTAAGAAAAATGTATTAAAATTGAATAATAAAATTTTAAATTTAAAAATTATTTTTTAGAAACTAACCTCTCTGTAACTCATTATAAAATTCAAATGACCCTCGGAAGTACTATTATCATTTAGAATAGAATTTTCTTTTTTTTCTCTTTCTTTTTTTTAAGGGGACAAAAGTTATACCTTATAACTTTATTTATATAATTTTTCGATTCTTAAAATTTTAAGAAGCAGTACAAACCCATGACCTCTGAGTCAGATATATGAATCTCAATTCTTTTTTATAATATATAAAAAGTTCTTTTATTATTATAACTAGTTTAGCAAAAGCTCTAATTTCTTACTTTTTAGTTGTGTCAATGTTATCATACAATAAAATAAATAATATCATGCGTTGCCCTTTTTTCACTTGATTTAAGAAACCTCATCTAGCCAATAGAAAAGAACATGCAACGACTTCATCAAATTTCTTTTAATACTTTTGAAGATAAAATTCGTCGAAAAATAGAGGATCAAGAGATATTTAGCCAATTTCTAACCGTAATATCTAAAATGATAAATAAGTCAATCATTTAAGACTTGTGATGGTTTTTATAAAATAAAACTACCAAGAATATTGTTGTGAATTATAACATTAATAATATAACATACTATATTTGTGAATTGTAATAAATTCAAGAACTTCTAGAAGATTAAAAAAAACCCCATGAAAAAGAATTTAATAAATTGAAAAAGTGACGACTAAATGCAAATTATAACTTATTTTGGATATATAACTTATTCGCAGATCCCAACGGCAACCAAAAGGGTAGAGAGTGCAACTCAACTGTAAAAAACAAGAAGGGCAAAGATGTAACATCCACAAATTGCTCTTTCATGTCCCAAAATCAAACCAATTCATCCCAAGAGATATTTCTTCCCAAGGAATGGACATAT

mRNA sequence

ATGGCTGCCGACGACCTCGAGCTTGCTGTAGAAGAAGCAATGCCATGGCTTCCGAGTCAAGTTCTCGACGAGGCTTGCGATATCAAGGTTCTACTTCTAATTCTACTTCTTCATCCATCGATAAATCGATCCATAGATCGCCTGATCTCTTTTAAATTTCAGGTGTATATGCGGCAACAACAGCAGAAGCCTTACCTCCACCGGCAACGGCGCCATGATCGTCCTCTGTCATCGCCGCCGTCGGATCATTTCGCGCTTCCACCGCATCAGAAATCGAAGTACGGTAATGTCTCTGCTCGGCCGCATCAGAGGCAGAAATCGGCGGCCAATTGGACGGCCGGAGGACCTGGAATGCAAGCGATTTTCCTCGACTCCGGCCGGCAATTAGGCGGCACCGGCGTTTTTCTTCCTCGAGGAGCAGCCACTGGTTACCAACCAAACAAGAAGCCAGTTTGCTCCATCGTTCTTCTCCCTGCTCGTGTTGTTCAAGCTCTTAATCTCGACGTTCAAGCATTAGGATTTCAAATTTCTCCTCGAAAAGATCCCAACGGCAACCAAAAGGGTAGAGAGTGCAACTCAACTGTAAAAAACAAGAAGGGCAAAGATGTAACATCCACAAATTGCTCTTTCATGTCCCAAAATCAAACCAATTCATCCCAAGAGATATTTCTTCCCAAGGAATGGACATAT

Coding sequence (CDS)

ATGGCTGCCGACGACCTCGAGCTTGCTGTAGAAGAAGCAATGCCATGGCTTCCGAGTCAAGTTCTCGACGAGGCTTGCGATATCAAGGTTCTACTTCTAATTCTACTTCTTCATCCATCGATAAATCGATCCATAGATCGCCTGATCTCTTTTAAATTTCAGGTGTATATGCGGCAACAACAGCAGAAGCCTTACCTCCACCGGCAACGGCGCCATGATCGTCCTCTGTCATCGCCGCCGTCGGATCATTTCGCGCTTCCACCGCATCAGAAATCGAAGTACGGTAATGTCTCTGCTCGGCCGCATCAGAGGCAGAAATCGGCGGCCAATTGGACGGCCGGAGGACCTGGAATGCAAGCGATTTTCCTCGACTCCGGCCGGCAATTAGGCGGCACCGGCGTTTTTCTTCCTCGAGGAGCAGCCACTGGTTACCAACCAAACAAGAAGCCAGTTTGCTCCATCGTTCTTCTCCCTGCTCGTGTTGTTCAAGCTCTTAATCTCGACGTTCAAGCATTAGGATTTCAAATTTCTCCTCGAAAAGATCCCAACGGCAACCAAAAGGGTAGAGAGTGCAACTCAACTGTAAAAAACAAGAAGGGCAAAGATGTAACATCCACAAATTGCTCTTTCATGTCCCAAAATCAAACCAATTCATCCCAAGAGATATTTCTTCCCAAGGAATGGACATAT

Protein sequence

MAADDLELAVEEAMPWLPSQVLDEACDIKVLLLILLLHPSINRSIDRLISFKFQVYMRQQQQKPYLHRQRRHDRPLSSPPSDHFALPPHQKSKYGNVSARPHQRQKSAANWTAGGPGMQAIFLDSGRQLGGTGVFLPRGAATGYQPNKKPVCSIVLLPARVVQALNLDVQALGFQISPRKDPNGNQKGRECNSTVKNKKGKDVTSTNCSFMSQNQTNSSQEIFLPKEWTY

Homology

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BLAST of MS018403 vs. NCBI nr
Match: XP_022150263.1 (uncharacterized protein LOC111018471 [Momordica charantia])

HSP 1 Score: 398.7 bits (1023), Expect = 3.5e-107
Identity = 204/230 (88.70%), Postives = 205/230 (89.13%), Query Frame = 0


Query: 1   MAADDLELAVEEAMPWLPSQVLDEACDIKVLLLILLLHPSINRSIDRLISFKFQVYMRQQ 60
           MAADDLELAVEEAMPWLPSQVLDEACDIK                         VYMRQQ
Sbjct: 1   MAADDLELAVEEAMPWLPSQVLDEACDIK-------------------------VYMRQQ 60

Query: 61  QQKPYLHRQRRHDRPLSSPPSDHFALPPHQKSKYGNVSARPHQRQKSAANWTAGGPGMQA 120
           QQKPYLHRQRRHDRPLSSPPSDHFALPPHQKSKYGNVSARPHQ+QKSAANWTAGGPGMQA
Sbjct: 61  QQKPYLHRQRRHDRPLSSPPSDHFALPPHQKSKYGNVSARPHQKQKSAANWTAGGPGMQA 120

Query: 121 IFLDSGRQLGGTGVFLPRGAATGYQPNKKPVCSIVLLPARVVQALNLDVQALGFQISPRK 180
           IFLDSGRQLGGTGVFLPRGAATGYQPNKKPVCSIVLLPARVVQALNLDVQALGFQISPRK
Sbjct: 121 IFLDSGRQLGGTGVFLPRGAATGYQPNKKPVCSIVLLPARVVQALNLDVQALGFQISPRK 180

Query: 181 DPNGNQKGRECNSTVKNKKGKDVTSTNCSFMSQNQTNSSQEIFLPKEWTY 231
           DPNGNQKGRECNSTVKNKKGKDVTSTNCSFMSQNQTNSSQEIFLPKEWTY
Sbjct: 181 DPNGNQKGRECNSTVKNKKGKDVTSTNCSFMSQNQTNSSQEIFLPKEWTY 205

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BLAST of MS018403 vs. NCBI nr
Match: XP_038899697.1 (uncharacterized protein LOC120086955 isoform X1 [Benincasa hispida])

HSP 1 Score: 288.1 bits (736), Expect = 6.6e-74
Identity = 168/238 (70.59%), Postives = 177/238 (74.37%), Query Frame = 0


Query: 1   MAADDLELAVEEAMPWLPSQVLDEACDIKVLLLILLLHPSINRSIDRLISFKFQVYMRQQ 60
           MAAD  EL VEEAMPWLP+QVLDEACDIK                         VYM+Q 
Sbjct: 1   MAAD--ELRVEEAMPWLPTQVLDEACDIK-------------------------VYMKQH 60

Query: 61  ----QQKPYLHRQRRHDRPLSSPPSDHFALPPHQKSKYGNVSARPHQRQKSA---ANWTA 120
               QQ  +LH  RRHDRPL SP    F+L P+QKSKY NV +RPHQRQK A   ANWTA
Sbjct: 61  HHHIQQPYFLH--RRHDRPLLSP--SDFSLSPNQKSKYNNVCSRPHQRQKPAAAEANWTA 120

Query: 121 GGPGMQAIFLDSGRQLGGTGVFLPRG-AATGYQPNKKPVCSIVLLPARVVQALNLDVQAL 180
           GG GMQAIFLDSGRQLGGTGVFLPRG   T YQPNKKP CS+VL+PARVVQALNLDVQAL
Sbjct: 121 GGHGMQAIFLDSGRQLGGTGVFLPRGTGGTSYQPNKKPACSMVLVPARVVQALNLDVQAL 180

Query: 181 GFQISPRKDPNGNQKGRECNSTVKNKKGKDVTSTNCSFMSQNQTNSSQEIFLPKEWTY 231
           G QIS RK+P  NQKGRECNS VKNKKGKDVTSTNCS MSQNQTNSSQEIFLPKEWTY
Sbjct: 181 GLQISSRKEPKSNQKGRECNSIVKNKKGKDVTSTNCS-MSQNQTNSSQEIFLPKEWTY 206

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BLAST of MS018403 vs. NCBI nr
Match: XP_038899698.1 (uncharacterized protein LOC120086955 isoform X2 [Benincasa hispida])

HSP 1 Score: 281.6 bits (719), Expect = 6.2e-72
Identity = 167/238 (70.17%), Postives = 175/238 (73.53%), Query Frame = 0


Query: 1   MAADDLELAVEEAMPWLPSQVLDEACDIKVLLLILLLHPSINRSIDRLISFKFQVYMRQQ 60
           MAAD  EL VEEAMPWLP+QVLDEACDIK                         VYM+Q 
Sbjct: 1   MAAD--ELRVEEAMPWLPTQVLDEACDIK-------------------------VYMKQH 60

Query: 61  ----QQKPYLHRQRRHDRPLSSPPSDHFALPPHQKSKYGNVSARPHQRQKSA---ANWTA 120
               QQ  +LH  RRHDRPL SP    F+L P  KSKY NV +RPHQRQK A   ANWTA
Sbjct: 61  HHHIQQPYFLH--RRHDRPLLSP--SDFSLSP--KSKYNNVCSRPHQRQKPAAAEANWTA 120

Query: 121 GGPGMQAIFLDSGRQLGGTGVFLPRG-AATGYQPNKKPVCSIVLLPARVVQALNLDVQAL 180
           GG GMQAIFLDSGRQLGGTGVFLPRG   T YQPNKKP CS+VL+PARVVQALNLDVQAL
Sbjct: 121 GGHGMQAIFLDSGRQLGGTGVFLPRGTGGTSYQPNKKPACSMVLVPARVVQALNLDVQAL 180

Query: 181 GFQISPRKDPNGNQKGRECNSTVKNKKGKDVTSTNCSFMSQNQTNSSQEIFLPKEWTY 231
           G QIS RK+P  NQKGRECNS VKNKKGKDVTSTNCS MSQNQTNSSQEIFLPKEWTY
Sbjct: 181 GLQISSRKEPKSNQKGRECNSIVKNKKGKDVTSTNCS-MSQNQTNSSQEIFLPKEWTY 204

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BLAST of MS018403 vs. NCBI nr
Match: XP_008451370.1 (PREDICTED: uncharacterized protein LOC103492680 [Cucumis melo])

HSP 1 Score: 278.9 bits (712), Expect = 4.0e-71
Identity = 155/234 (66.24%), Postives = 176/234 (75.21%), Query Frame = 0


Query: 7   ELAVEEAMPWLPSQVLDEACDIKVLLLILLLHPSINRSIDRLISFKFQVYMRQQ------ 66
           +L +EEAMPWLPSQVLDEACDIK                         VYMRQ+      
Sbjct: 5   QLPLEEAMPWLPSQVLDEACDIK-------------------------VYMRQRHHYHHI 64

Query: 67  QQKPYLHRQRRHDRPLSSPPSDHFALPPHQKSKYGNVSARPHQRQKSAANWTAGGPGMQA 126
           QQ P+LHRQR H RPL SP    FAL  ++KSKY N+ +RP+Q+QK A+NWTAGG GMQA
Sbjct: 65  QQPPFLHRQRPHHRPLLSP--SDFALSLNEKSKYSNICSRPNQKQKPASNWTAGGQGMQA 124

Query: 127 IFLDSGRQLGGTGVFLPR--GAATGYQPNKKPVCSIVLLPARVVQALNLDVQALGFQISP 186
           IFLDSGRQLGGTGVFLPR  G ++ YQPN+KP CS+VL+PARVV+ALNLDVQALG QISP
Sbjct: 125 IFLDSGRQLGGTGVFLPRGTGGSSNYQPNQKPACSMVLVPARVVKALNLDVQALGLQISP 184

Query: 187 RKDPNGNQKGREC-NSTVKNKKGKDVTSTNCSFMSQNQTNSSQE-IFLPKEWTY 231
           RK+   NQKGREC NS VKNKKGKD+TST+CSFMSQNQTNSSQ+ IFLPKEWTY
Sbjct: 185 RKEAKNNQKGRECNNSIVKNKKGKDITSTHCSFMSQNQTNSSQDIIFLPKEWTY 211

[Close]

BLAST of MS018403 vs. NCBI nr
Match: XP_022953989.1 (uncharacterized protein LOC111456382 isoform X1 [Cucurbita moschata])

HSP 1 Score: 278.1 bits (710), Expect = 6.9e-71
Identity = 162/237 (68.35%), Postives = 175/237 (73.84%), Query Frame = 0


Query: 1   MAADDLELAVEEAMPWLPSQVLDEACDIKVLLLILLLHPSINRSIDRLISFKFQVYMRQ- 60
           MAA+  EL VEEA+PWLPSQVLDEACDIK                         VYMRQ 
Sbjct: 1   MAAE--ELRVEEALPWLPSQVLDEACDIK-------------------------VYMRQH 60

Query: 61  --QQQKPYLHRQRRHDRPLSSPPSDHFALPPHQKSKYGNVSARPHQRQK---SAANWTAG 120
             +QQ  +L RQRRHDRPL S  S  FAL  +QKSK+ NVS+ PHQRQK   SAANWTAG
Sbjct: 61  HHKQQPYFLQRQRRHDRPLLS--SSDFALSSNQKSKFSNVSSLPHQRQKPAVSAANWTAG 120

Query: 121 GPGMQAIFLDSGRQLGGTGVFLPRG-AATGYQPNKKPVCSIVLLPARVVQALNLDVQALG 180
           G GMQAIFLD GRQLGGTGVFLPRG  +T YQPNKKP CS+VL+PARVVQALNLDVQALG
Sbjct: 121 GHGMQAIFLDCGRQLGGTGVFLPRGTGSTNYQPNKKPACSMVLVPARVVQALNLDVQALG 180

Query: 181 FQISPRKDPNGNQKGRECNSTVKNKKGKDVTSTNCSFMSQNQTNSSQEIFLPKEWTY 231
            QISPRKDP  NQ GRECNS VKNKKGKDV    CSF+S+NQ +SSQEIFLPKEWTY
Sbjct: 181 LQISPRKDPKINQNGRECNSMVKNKKGKDV---KCSFVSRNQAHSSQEIFLPKEWTY 205

[Close]

BLAST of MS018403 vs. ExPASy TrEMBL
Match: A0A6J1D8Z6 (uncharacterized protein LOC111018471 OS=Momordica charantia OX=3673 GN=LOC111018471 PE=4 SV=1)

HSP 1 Score: 398.7 bits (1023), Expect = 1.7e-107
Identity = 204/230 (88.70%), Postives = 205/230 (89.13%), Query Frame = 0


Query: 1   MAADDLELAVEEAMPWLPSQVLDEACDIKVLLLILLLHPSINRSIDRLISFKFQVYMRQQ 60
           MAADDLELAVEEAMPWLPSQVLDEACDIK                         VYMRQQ
Sbjct: 1   MAADDLELAVEEAMPWLPSQVLDEACDIK-------------------------VYMRQQ 60

Query: 61  QQKPYLHRQRRHDRPLSSPPSDHFALPPHQKSKYGNVSARPHQRQKSAANWTAGGPGMQA 120
           QQKPYLHRQRRHDRPLSSPPSDHFALPPHQKSKYGNVSARPHQ+QKSAANWTAGGPGMQA
Sbjct: 61  QQKPYLHRQRRHDRPLSSPPSDHFALPPHQKSKYGNVSARPHQKQKSAANWTAGGPGMQA 120

Query: 121 IFLDSGRQLGGTGVFLPRGAATGYQPNKKPVCSIVLLPARVVQALNLDVQALGFQISPRK 180
           IFLDSGRQLGGTGVFLPRGAATGYQPNKKPVCSIVLLPARVVQALNLDVQALGFQISPRK
Sbjct: 121 IFLDSGRQLGGTGVFLPRGAATGYQPNKKPVCSIVLLPARVVQALNLDVQALGFQISPRK 180

Query: 181 DPNGNQKGRECNSTVKNKKGKDVTSTNCSFMSQNQTNSSQEIFLPKEWTY 231
           DPNGNQKGRECNSTVKNKKGKDVTSTNCSFMSQNQTNSSQEIFLPKEWTY
Sbjct: 181 DPNGNQKGRECNSTVKNKKGKDVTSTNCSFMSQNQTNSSQEIFLPKEWTY 205

[Close]

BLAST of MS018403 vs. ExPASy TrEMBL
Match: A0A1S3BS46 (uncharacterized protein LOC103492680 OS=Cucumis melo OX=3656 GN=LOC103492680 PE=4 SV=1)

HSP 1 Score: 278.9 bits (712), Expect = 1.9e-71
Identity = 155/234 (66.24%), Postives = 176/234 (75.21%), Query Frame = 0


Query: 7   ELAVEEAMPWLPSQVLDEACDIKVLLLILLLHPSINRSIDRLISFKFQVYMRQQ------ 66
           +L +EEAMPWLPSQVLDEACDIK                         VYMRQ+      
Sbjct: 5   QLPLEEAMPWLPSQVLDEACDIK-------------------------VYMRQRHHYHHI 64

Query: 67  QQKPYLHRQRRHDRPLSSPPSDHFALPPHQKSKYGNVSARPHQRQKSAANWTAGGPGMQA 126
           QQ P+LHRQR H RPL SP    FAL  ++KSKY N+ +RP+Q+QK A+NWTAGG GMQA
Sbjct: 65  QQPPFLHRQRPHHRPLLSP--SDFALSLNEKSKYSNICSRPNQKQKPASNWTAGGQGMQA 124

Query: 127 IFLDSGRQLGGTGVFLPR--GAATGYQPNKKPVCSIVLLPARVVQALNLDVQALGFQISP 186
           IFLDSGRQLGGTGVFLPR  G ++ YQPN+KP CS+VL+PARVV+ALNLDVQALG QISP
Sbjct: 125 IFLDSGRQLGGTGVFLPRGTGGSSNYQPNQKPACSMVLVPARVVKALNLDVQALGLQISP 184

Query: 187 RKDPNGNQKGREC-NSTVKNKKGKDVTSTNCSFMSQNQTNSSQE-IFLPKEWTY 231
           RK+   NQKGREC NS VKNKKGKD+TST+CSFMSQNQTNSSQ+ IFLPKEWTY
Sbjct: 185 RKEAKNNQKGRECNNSIVKNKKGKDITSTHCSFMSQNQTNSSQDIIFLPKEWTY 211

[Close]

BLAST of MS018403 vs. ExPASy TrEMBL
Match: A0A6J1GRJ3 (uncharacterized protein LOC111456382 isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111456382 PE=4 SV=1)

HSP 1 Score: 278.1 bits (710), Expect = 3.3e-71
Identity = 162/237 (68.35%), Postives = 175/237 (73.84%), Query Frame = 0


Query: 1   MAADDLELAVEEAMPWLPSQVLDEACDIKVLLLILLLHPSINRSIDRLISFKFQVYMRQ- 60
           MAA+  EL VEEA+PWLPSQVLDEACDIK                         VYMRQ 
Sbjct: 1   MAAE--ELRVEEALPWLPSQVLDEACDIK-------------------------VYMRQH 60

Query: 61  --QQQKPYLHRQRRHDRPLSSPPSDHFALPPHQKSKYGNVSARPHQRQK---SAANWTAG 120
             +QQ  +L RQRRHDRPL S  S  FAL  +QKSK+ NVS+ PHQRQK   SAANWTAG
Sbjct: 61  HHKQQPYFLQRQRRHDRPLLS--SSDFALSSNQKSKFSNVSSLPHQRQKPAVSAANWTAG 120

Query: 121 GPGMQAIFLDSGRQLGGTGVFLPRG-AATGYQPNKKPVCSIVLLPARVVQALNLDVQALG 180
           G GMQAIFLD GRQLGGTGVFLPRG  +T YQPNKKP CS+VL+PARVVQALNLDVQALG
Sbjct: 121 GHGMQAIFLDCGRQLGGTGVFLPRGTGSTNYQPNKKPACSMVLVPARVVQALNLDVQALG 180

Query: 181 FQISPRKDPNGNQKGRECNSTVKNKKGKDVTSTNCSFMSQNQTNSSQEIFLPKEWTY 231
            QISPRKDP  NQ GRECNS VKNKKGKDV    CSF+S+NQ +SSQEIFLPKEWTY
Sbjct: 181 LQISPRKDPKINQNGRECNSMVKNKKGKDV---KCSFVSRNQAHSSQEIFLPKEWTY 205

[Close]

BLAST of MS018403 vs. ExPASy TrEMBL
Match: A0A6J1JXV2 (uncharacterized protein LOC111488842 isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC111488842 PE=4 SV=1)

HSP 1 Score: 272.7 bits (696), Expect = 1.4e-69
Identity = 162/239 (67.78%), Postives = 174/239 (72.80%), Query Frame = 0


Query: 1   MAADDLELAVEEAMPWLPSQVLDEACDIKVLLLILLLHPSINRSIDRLISFKFQVYMRQ- 60
           MAA+  EL VEEAMPWLPSQVLDEACDIK                         VYMRQ 
Sbjct: 1   MAAE--ELRVEEAMPWLPSQVLDEACDIK-------------------------VYMRQH 60

Query: 61  --QQQKPYLHRQRRHDRPLSSPPSDHFALPPHQKSKYGNVSARPHQRQK---SAANWTAG 120
             +QQ  +L RQR HDRPL S  S  FAL  +QKSK+ NVS+ PHQRQK   SAANWTAG
Sbjct: 61  HHKQQPYFLQRQRHHDRPLLS--SSDFALSSNQKSKFSNVSSLPHQRQKPAVSAANWTAG 120

Query: 121 GPGMQAIFLDSGRQLGGTGVFLPRG-AATGYQPNKKPVCSIVLLPARVVQALNLDVQA-- 180
           G GMQAIFLD GRQLGGTGVFLPRG   T YQPNKKP CS+VL+PARVVQALNLDVQA  
Sbjct: 121 GHGMQAIFLDCGRQLGGTGVFLPRGTGGTNYQPNKKPACSMVLVPARVVQALNLDVQALG 180

Query: 181 LGFQISPRKDPNGNQKGRECNSTVKNKKGKDVTSTNCSFMSQNQTNSSQEIFLPKEWTY 231
           LG QISPRKDP  N+ GRECNS VKNKKGKDV   NCSF+S+NQ +SSQEIFLPKEWTY
Sbjct: 181 LGLQISPRKDPKINKNGRECNSMVKNKKGKDV---NCSFVSRNQAHSSQEIFLPKEWTY 207

[Close]

BLAST of MS018403 vs. ExPASy TrEMBL
Match: A0A6J1GR68 (uncharacterized protein LOC111456382 isoform X2 OS=Cucurbita moschata OX=3662 GN=LOC111456382 PE=4 SV=1)

HSP 1 Score: 271.6 bits (693), Expect = 3.1e-69
Identity = 161/237 (67.93%), Postives = 173/237 (73.00%), Query Frame = 0


Query: 1   MAADDLELAVEEAMPWLPSQVLDEACDIKVLLLILLLHPSINRSIDRLISFKFQVYMRQ- 60
           MAA+  EL VEEA+PWLPSQVLDEACDIK                         VYMRQ 
Sbjct: 1   MAAE--ELRVEEALPWLPSQVLDEACDIK-------------------------VYMRQH 60

Query: 61  --QQQKPYLHRQRRHDRPLSSPPSDHFALPPHQKSKYGNVSARPHQRQK---SAANWTAG 120
             +QQ  +L RQRRHDRPL S  S  FAL    KSK+ NVS+ PHQRQK   SAANWTAG
Sbjct: 61  HHKQQPYFLQRQRRHDRPLLS--SSDFAL--SSKSKFSNVSSLPHQRQKPAVSAANWTAG 120

Query: 121 GPGMQAIFLDSGRQLGGTGVFLPRG-AATGYQPNKKPVCSIVLLPARVVQALNLDVQALG 180
           G GMQAIFLD GRQLGGTGVFLPRG  +T YQPNKKP CS+VL+PARVVQALNLDVQALG
Sbjct: 121 GHGMQAIFLDCGRQLGGTGVFLPRGTGSTNYQPNKKPACSMVLVPARVVQALNLDVQALG 180

Query: 181 FQISPRKDPNGNQKGRECNSTVKNKKGKDVTSTNCSFMSQNQTNSSQEIFLPKEWTY 231
            QISPRKDP  NQ GRECNS VKNKKGKDV    CSF+S+NQ +SSQEIFLPKEWTY
Sbjct: 181 LQISPRKDPKINQNGRECNSMVKNKKGKDV---KCSFVSRNQAHSSQEIFLPKEWTY 203

[Close]

BLAST of MS018403 vs. TAIR 10
Match: AT4G02830.1 (unknown protein; Has 74 Blast hits to 74 proteins in 13 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 74; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 78.2 bits (191), Expect = 9.7e-15
Identity = 54/130 (41.54%), Postives = 70/130 (53.85%), Query Frame = 0


Query: 104 RQKSAANW--TAGGPGMQAIFL-DSGRQLGGTGVFLPRGAATGYQPNKKPVCSIVLLPAR 163
           RQK  +NW  + G   MQA FL   GR   GTGVFLP  A   + P KK  CS VLLP R
Sbjct: 67  RQKHQSNWQRSKGEDRMQAFFLVTPGRTTSGTGVFLP--ATASHPPTKKTACSPVLLPTR 126

Query: 164 VVQALNLDVQALGFQISPRKDPNGNQKGRECNSTVKNKKGKDVTSTNCSFMSQNQTNSSQ 223
           VVQALNL++   G  ISPR +   N            KK + + +T     ++N  +S +
Sbjct: 127 VVQALNLNIHNNGIHISPRPEIREND---------SKKKSEMLATTPIKIEAENPIDSPE 184

Query: 224 EIFLPKEWTY 231
           ++ LP+EW Y
Sbjct: 187 KL-LPEEWIY 184

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BLAST of MS018403 vs. TAIR 10
Match: AT4G02830.2 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown. )

HSP 1 Score: 78.2 bits (191), Expect = 9.7e-15
Identity = 54/130 (41.54%), Postives = 70/130 (53.85%), Query Frame = 0


Query: 104 RQKSAANW--TAGGPGMQAIFL-DSGRQLGGTGVFLPRGAATGYQPNKKPVCSIVLLPAR 163
           RQK  +NW  + G   MQA FL   GR   GTGVFLP  A   + P KK  CS VLLP R
Sbjct: 65  RQKHQSNWQRSKGEDRMQAFFLVTPGRTTSGTGVFLP--ATASHPPTKKTACSPVLLPTR 124

Query: 164 VVQALNLDVQALGFQISPRKDPNGNQKGRECNSTVKNKKGKDVTSTNCSFMSQNQTNSSQ 223
           VVQALNL++   G  ISPR +   N            KK + + +T     ++N  +S +
Sbjct: 125 VVQALNLNIHNNGIHISPRPEIREND---------SKKKSEMLATTPIKIEAENPIDSPE 182

Query: 224 EIFLPKEWTY 231
           ++ LP+EW Y
Sbjct: 185 KL-LPEEWIY 182

[Close]

BLAST of MS018403 vs. TAIR 10
Match: AT5G59050.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G54000.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). )

HSP 1 Score: 56.6 bits (135), Expect = 3.0e-08
Identity = 48/139 (34.53%), Postives = 68/139 (48.92%), Query Frame = 0


Query: 102 HQRQKSAANWTAGGPGMQAIFLD-SGRQL--GGTGVFLPRGAATGYQPNKKPVCSIVLLP 161
           HQ Q+  +       G++A+F+D SG +   GGTGVFLPRG  T  +  KK  CS V++P
Sbjct: 181 HQNQRPRS-------GVKAVFVDGSGSRTGSGGTGVFLPRGHGTVVESRKKSGCSTVIIP 240

Query: 162 ARVVQALNLDVQALGFQISPRKD-PNGNQKGRECNSTVKNKKGKDVTSTNCSFMSQNQTN 221
           ARVV+AL +    LG   +   D P  +       +  K K  K+ + +     S  +  
Sbjct: 241 ARVVEALKVHFDKLGVPSTFSSDIPPFHDALLVSMNNKKIKSNKNTSLSRVQSGSPYEME 300

Query: 222 SSQEIF------LPKEWTY 231
            S E        LP+EWTY
Sbjct: 301 MSAESHQEPPADLPQEWTY 312

The following BLAST results are available for this feature:

BLAST of MS018403 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022150263.1	3.5e-107	88.70	uncharacterized protein LOC111018471 [Momordica charantia]	[more]
XP_038899697.1	6.6e-74	70.59	uncharacterized protein LOC120086955 isoform X1 [Benincasa hispida]	[more]
XP_038899698.1	6.2e-72	70.17	uncharacterized protein LOC120086955 isoform X2 [Benincasa hispida]	[more]
XP_008451370.1	4.0e-71	66.24	PREDICTED: uncharacterized protein LOC103492680 [Cucumis melo]	[more]
XP_022953989.1	6.9e-71	68.35	uncharacterized protein LOC111456382 isoform X1 [Cucurbita moschata]	[more]

BLAST of MS018403 vs. NCBI nr


Match Name	E-value	Identity	Description

BLAST of MS018403 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1D8Z6	1.7e-107	88.70	uncharacterized protein LOC111018471 OS=Momordica charantia OX=3673 GN=LOC111018...	[more]
A0A1S3BS46	1.9e-71	66.24	uncharacterized protein LOC103492680 OS=Cucumis melo OX=3656 GN=LOC103492680 PE=...	[more]
A0A6J1GRJ3	3.3e-71	68.35	uncharacterized protein LOC111456382 isoform X1 OS=Cucurbita moschata OX=3662 GN...	[more]
A0A6J1JXV2	1.4e-69	67.78	uncharacterized protein LOC111488842 isoform X1 OS=Cucurbita maxima OX=3661 GN=L...	[more]
A0A6J1GR68	3.1e-69	67.93	uncharacterized protein LOC111456382 isoform X2 OS=Cucurbita moschata OX=3662 GN...	[more]

BLAST of MS018403 vs. TAIR 10


Match Name	E-value	Identity	Description
AT4G02830.1	9.7e-15	41.54	unknown protein; Has 74 Blast hits to 74 proteins in 13 species: Archae - 0; Bac...	[more]
AT4G02830.2	9.7e-15	41.54	unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic...	[more]
AT5G59050.1	3.0e-08	34.53	unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TA...	[more]

InterPro

Analysis Name: InterPro Annotations of Bitter gourd (TR) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 177..212
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 62..111
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 96..111
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 198..212
None	No IPR available	PANTHER	PTHR33356:SF26	SUBFAMILY NOT NAMED	coord: 7..230
None	No IPR available	PANTHER	PTHR33356	TIP41-LIKE PROTEIN	coord: 7..230

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
MS018403.1	MS018403.1	mRNA