MS018390 (gene) Bitter gourd (TR) v1

Overview
NameMS018390
Typegene
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
DescriptionCyclin
Locationscaffold342: 580884 .. 581615 (-)
RNA-Seq ExpressionMS018390
SyntenyMS018390
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGCAGCTTCAGAACTTGAAACCGAAGACGTTTGCTCGGATATTTACGTTAATCTGGGGCTTAAGTCATTGCGGAAAGGAATTCGGAGAAATCCTCGTGTTCTCTTGCTTCTTTCTTCTCTCTTAGAAAGATCTGTTCAAAGAAATGAGTTGCTAATGGAGGCCACACAAGTCAAAGATGCTCGTACAATGTTTCATGGTTTACAAGCTCCCACCTTGAGTATTCGTTGTTATATCGACCGCATCTTCAAGTACTTCGGCTGCAGCCCATCATGCTTTGTCGTTGCTAATATCTACGTCGATCGATTCCTCAAGTGCATGGAGATCCAATTGACTTCCCTCAACGTCCATCGGCTGCTGATAACAAGTATAATGCTGGCTGCAAAGTTCATCGATGATGCGTAAGCACTGATCCATTGCATCAATTCGTTTTCGTGAAACTTCTCGAGTGCTAACATTTGTGCAACTTGGCTTTGCAGATTCTTCAACAATGCCTACTATGCAAGAGTAGGGGGAGTGAGCACGGCGGAGTTAAACCGACTCGAGATGAAGTTTTTGTTCAGTATAGACTTCAGACTTCAGGTAAGTATACAGACATTCGGGCGATACTGTTATCAACTGGAAAAAGAAGGAATGGAAACACGGCAGATCGAACGCCCGATTCGAGCTTGCGGGATTAAGGAGAGCTGGTCGAGTAAAGACGAGAACTCACGTGCTTCAACAACAGCCAGA

mRNA sequence

ATGGCAGCTTCAGAACTTGAAACCGAAGACGTTTGCTCGGATATTTACGTTAATCTGGGGCTTAAGTCATTGCGGAAAGGAATTCGGAGAAATCCTCGTGTTCTCTTGCTTCTTTCTTCTCTCTTAGAAAGATCTGTTCAAAGAAATGAGTTGCTAATGGAGGCCACACAAGTCAAAGATGCTCGTACAATGTTTCATGGTTTACAAGCTCCCACCTTGAGTATTCGTTGTTATATCGACCGCATCTTCAAGTACTTCGGCTGCAGCCCATCATGCTTTGTCGTTGCTAATATCTACGTCGATCGATTCCTCAAGTGCATGGAGATCCAATTGACTTCCCTCAACGTCCATCGGCTGCTGATAACAAGTATAATGCTGGCTGCAAAGTTCATCGATGATGCATTCTTCAACAATGCCTACTATGCAAGAGTAGGGGGAGTGAGCACGGCGGAGTTAAACCGACTCGAGATGAAGTTTTTGTTCAGTATAGACTTCAGACTTCAGGTAAGTATACAGACATTCGGGCGATACTGTTATCAACTGGAAAAAGAAGGAATGGAAACACGGCAGATCGAACGCCCGATTCGAGCTTGCGGGATTAAGGAGAGCTGGTCGAGTAAAGACGAGAACTCACGTGCTTCAACAACAGCCAGA

Coding sequence (CDS)

ATGGCAGCTTCAGAACTTGAAACCGAAGACGTTTGCTCGGATATTTACGTTAATCTGGGGCTTAAGTCATTGCGGAAAGGAATTCGGAGAAATCCTCGTGTTCTCTTGCTTCTTTCTTCTCTCTTAGAAAGATCTGTTCAAAGAAATGAGTTGCTAATGGAGGCCACACAAGTCAAAGATGCTCGTACAATGTTTCATGGTTTACAAGCTCCCACCTTGAGTATTCGTTGTTATATCGACCGCATCTTCAAGTACTTCGGCTGCAGCCCATCATGCTTTGTCGTTGCTAATATCTACGTCGATCGATTCCTCAAGTGCATGGAGATCCAATTGACTTCCCTCAACGTCCATCGGCTGCTGATAACAAGTATAATGCTGGCTGCAAAGTTCATCGATGATGCATTCTTCAACAATGCCTACTATGCAAGAGTAGGGGGAGTGAGCACGGCGGAGTTAAACCGACTCGAGATGAAGTTTTTGTTCAGTATAGACTTCAGACTTCAGGTAAGTATACAGACATTCGGGCGATACTGTTATCAACTGGAAAAAGAAGGAATGGAAACACGGCAGATCGAACGCCCGATTCGAGCTTGCGGGATTAAGGAGAGCTGGTCGAGTAAAGACGAGAACTCACGTGCTTCAACAACAGCCAGA

Protein sequence

MAASELETEDVCSDIYVNLGLKSLRKGIRRNPRVLLLLSSLLERSVQRNELLMEATQVKDARTMFHGLQAPTLSIRCYIDRIFKYFGCSPSCFVVANIYVDRFLKCMEIQLTSLNVHRLLITSIMLAAKFIDDAFFNNAYYARVGGVSTAELNRLEMKFLFSIDFRLQVSIQTFGRYCYQLEKEGMETRQIERPIRACGIKESWSSKDENSRASTTAR
Homology
[Close]
BLAST of MS018390 vs. NCBI nr
Match: XP_022150289.1 (cyclin-P3-1 [Momordica charantia])

HSP 1 Score: 426.4 bits (1095), Expect = 1.5e-115
Identity = 218/218 (100.00%), Postives = 218/218 (100.00%), Query Frame = 0 

Query: 1   MAASELETEDVCSDIYVNLGLKSLRKGIRRNPRVLLLLSSLLERSVQRNELLMEATQVKD 60
           MAASELETEDVCSDIYVNLGLKSLRKGIRRNPRVLLLLSSLLERSVQRNELLMEATQVKD
Sbjct: 1   MAASELETEDVCSDIYVNLGLKSLRKGIRRNPRVLLLLSSLLERSVQRNELLMEATQVKD 60

Query: 61  ARTMFHGLQAPTLSIRCYIDRIFKYFGCSPSCFVVANIYVDRFLKCMEIQLTSLNVHRLL 120
           ARTMFHGLQAPTLSIRCYIDRIFKYFGCSPSCFVVANIYVDRFLKCMEIQLTSLNVHRLL
Sbjct: 61  ARTMFHGLQAPTLSIRCYIDRIFKYFGCSPSCFVVANIYVDRFLKCMEIQLTSLNVHRLL 120

Query: 121 ITSIMLAAKFIDDAFFNNAYYARVGGVSTAELNRLEMKFLFSIDFRLQVSIQTFGRYCYQ 180
           ITSIMLAAKFIDDAFFNNAYYARVGGVSTAELNRLEMKFLFSIDFRLQVSIQTFGRYCYQ
Sbjct: 121 ITSIMLAAKFIDDAFFNNAYYARVGGVSTAELNRLEMKFLFSIDFRLQVSIQTFGRYCYQ 180

Query: 181 LEKEGMETRQIERPIRACGIKESWSSKDENSRASTTAR 219
           LEKEGMETRQIERPIRACGIKESWSSKDENSRASTTAR
Sbjct: 181 LEKEGMETRQIERPIRACGIKESWSSKDENSRASTTAR 218

[Close]
BLAST of MS018390 vs. NCBI nr
Match: XP_008451358.1 (PREDICTED: cyclin-P3-1 [Cucumis melo])

HSP 1 Score: 391.7 bits (1005), Expect = 4.0e-105
Identity = 198/218 (90.83%), Postives = 209/218 (95.87%), Query Frame = 0 

Query: 1   MAASELETEDVCSDIYVNLGLKSLRKGIRRNPRVLLLLSSLLERSVQRNELLMEATQVKD 60
           MAASELE EDVCSDIYVNLGLKSL KGIR+NPRVL LLSSLLERSV++NELLMEATQVKD
Sbjct: 1   MAASELEVEDVCSDIYVNLGLKSLHKGIRKNPRVLTLLSSLLERSVKKNELLMEATQVKD 60

Query: 61  ARTMFHGLQAPTLSIRCYIDRIFKYFGCSPSCFVVANIYVDRFLKCMEIQLTSLNVHRLL 120
           ARTMFHGL+APTLSIRCY+DRIFKYFGCSPSCFV+ANIYVDRFLKC EIQLTSLNVHRLL
Sbjct: 61  ARTMFHGLRAPTLSIRCYMDRIFKYFGCSPSCFVIANIYVDRFLKCTEIQLTSLNVHRLL 120

Query: 121 ITSIMLAAKFIDDAFFNNAYYARVGGVSTAELNRLEMKFLFSIDFRLQVSIQTFGRYCYQ 180
           ITSIMLAAKFIDD+FFNNAYYA+VGGVSTAELN+LEMKFLFSIDFRLQV+IQTFGRYCYQ
Sbjct: 121 ITSIMLAAKFIDDSFFNNAYYAKVGGVSTAELNKLEMKFLFSIDFRLQVNIQTFGRYCYQ 180

Query: 181 LEKEGMETRQIERPIRACGIKESWSSKDENSRASTTAR 219
           LEKEG ETRQIER IRAC IKESWS+KDE S ASTTAR
Sbjct: 181 LEKEGTETRQIERSIRACRIKESWSNKDEKSCASTTAR 218

[Close]
BLAST of MS018390 vs. NCBI nr
Match: XP_038899829.1 (cyclin-P3-1 [Benincasa hispida])

HSP 1 Score: 391.0 bits (1003), Expect = 6.9e-105
Identity = 198/218 (90.83%), Postives = 210/218 (96.33%), Query Frame = 0 

Query: 1   MAASELETEDVCSDIYVNLGLKSLRKGIRRNPRVLLLLSSLLERSVQRNELLMEATQVKD 60
           MAASELETEDVCSDIYVNLGLKSLRKGIRRNPRVL LLSSLLERSV++NELLMEATQVK+
Sbjct: 1   MAASELETEDVCSDIYVNLGLKSLRKGIRRNPRVLTLLSSLLERSVKKNELLMEATQVKE 60

Query: 61  ARTMFHGLQAPTLSIRCYIDRIFKYFGCSPSCFVVANIYVDRFLKCMEIQLTSLNVHRLL 120
           ARTMFHGL+APTLSI+CYIDRIFKYFGCSPSCFV+ANIYVDRFLKC EIQLTSLNVHRLL
Sbjct: 61  ARTMFHGLRAPTLSIQCYIDRIFKYFGCSPSCFVIANIYVDRFLKCTEIQLTSLNVHRLL 120

Query: 121 ITSIMLAAKFIDDAFFNNAYYARVGGVSTAELNRLEMKFLFSIDFRLQVSIQTFGRYCYQ 180
           ITSIMLAAKFIDD+FFNNAYYA+VGGVSTAELN+LEMKFLFSIDFRLQV+IQTF RYCY+
Sbjct: 121 ITSIMLAAKFIDDSFFNNAYYAKVGGVSTAELNKLEMKFLFSIDFRLQVNIQTFSRYCYK 180

Query: 181 LEKEGMETRQIERPIRACGIKESWSSKDENSRASTTAR 219
           LEKEG ETRQIER IRAC IKESWS+KDE S ASTTAR
Sbjct: 181 LEKEGTETRQIERSIRACRIKESWSNKDEKSCASTTAR 218

[Close]
BLAST of MS018390 vs. NCBI nr
Match: KAA0064079.1 (cyclin-P3-1 [Cucumis melo var. makuwa] >TYK18502.1 cyclin-P3-1 [Cucumis melo var. makuwa])

HSP 1 Score: 390.2 bits (1001), Expect = 1.2e-104
Identity = 197/218 (90.37%), Postives = 209/218 (95.87%), Query Frame = 0 

Query: 1   MAASELETEDVCSDIYVNLGLKSLRKGIRRNPRVLLLLSSLLERSVQRNELLMEATQVKD 60
           MAASELE EDVCSDIYVNLGLKSL KGIR+NPRVL LLSSLLERSV++NELLMEATQVKD
Sbjct: 1   MAASELEVEDVCSDIYVNLGLKSLHKGIRKNPRVLTLLSSLLERSVKKNELLMEATQVKD 60

Query: 61  ARTMFHGLQAPTLSIRCYIDRIFKYFGCSPSCFVVANIYVDRFLKCMEIQLTSLNVHRLL 120
           ARTMFHGL+APTLSI+CY+DRIFKYFGCSPSCFV+ANIYVDRFLKC EIQLTSLNVHRLL
Sbjct: 61  ARTMFHGLRAPTLSIQCYMDRIFKYFGCSPSCFVIANIYVDRFLKCTEIQLTSLNVHRLL 120

Query: 121 ITSIMLAAKFIDDAFFNNAYYARVGGVSTAELNRLEMKFLFSIDFRLQVSIQTFGRYCYQ 180
           ITSIMLAAKFIDD+FFNNAYYA+VGGVSTAELN+LEMKFLFSIDFRLQV+IQTFGRYCYQ
Sbjct: 121 ITSIMLAAKFIDDSFFNNAYYAKVGGVSTAELNKLEMKFLFSIDFRLQVNIQTFGRYCYQ 180

Query: 181 LEKEGMETRQIERPIRACGIKESWSSKDENSRASTTAR 219
           LEKEG ETRQIER IRAC IKESWS+KDE S ASTTAR
Sbjct: 181 LEKEGTETRQIERSIRACRIKESWSNKDEKSCASTTAR 218

[Close]
BLAST of MS018390 vs. NCBI nr
Match: XP_022992552.1 (cyclin-P3-1-like [Cucurbita maxima] >XP_022992553.1 cyclin-P3-1-like [Cucurbita maxima])

HSP 1 Score: 387.1 bits (993), Expect = 1.0e-103
Identity = 197/219 (89.95%), Postives = 208/219 (94.98%), Query Frame = 0 

Query: 1   MAASELETEDVCSDIYVNLGLKSLRKGIRRNPRVLLLLSSLLERSVQRNELLMEATQVKD 60
           MAASEL TED+CSDIYVNLGLKSLRKGIRRNPRVL LLSSLLERSV++NELLMEATQVKD
Sbjct: 1   MAASELGTEDICSDIYVNLGLKSLRKGIRRNPRVLTLLSSLLERSVKKNELLMEATQVKD 60

Query: 61  ARTMFHGLQAPTLSIRCYIDRIFKYFGCSPSCFVVANIYVDRFLKCMEIQLTSLNVHRLL 120
           ARTMFHGL+APTLSIRCYIDRIFKYFGCSPSCFV+ANIYVDRFLKCMEIQLTSLNVHRLL
Sbjct: 61  ARTMFHGLRAPTLSIRCYIDRIFKYFGCSPSCFVIANIYVDRFLKCMEIQLTSLNVHRLL 120

Query: 121 ITSIMLAAKFIDDAFFNNAYYARVGGVSTAELNRLEMKFLFSIDFRLQVSIQTFGRYCYQ 180
           ITSIMLAAKFIDD+FFNNAYYA+VGG+ST ELN+LEMKFLFSIDFRLQV+IQTFGRYCYQ
Sbjct: 121 ITSIMLAAKFIDDSFFNNAYYAKVGGISTTELNKLEMKFLFSIDFRLQVNIQTFGRYCYQ 180

Query: 181 LEKEGMETRQIERPIRACGIKESWSSKDENSRA-STTAR 219
           LEKEG  TRQIER IRAC IKE WS+KDE S A STTAR
Sbjct: 181 LEKEGPGTRQIERSIRACSIKEIWSNKDEKSHASSTTAR 219

[Close]
BLAST of MS018390 vs. ExPASy Swiss-Prot
Match: Q75HV0 (Cyclin-P3-1 OS=Oryza sativa subsp. japonica OX=39947 GN=CYCP3-1 PE=3 SV=1)

HSP 1 Score: 214.2 bits (544), Expect = 1.5e-54
Identity = 108/198 (54.55%), Postives = 150/198 (75.76%), Query Frame = 0 

Query: 1   MAASELETEDVCSDIYVNLGL--KSLRKGIRRNPRVLLLLSSLLERSVQRNELLMEATQV 60
           M     +  D   + Y++LGL     +K     P+VLLLL++ L+RSVQ+NE L+++ ++
Sbjct: 3   MGTFTTDESDKHEESYLSLGLTVSQSKKNNTEYPKVLLLLAAYLDRSVQKNEDLLDSNKI 62

Query: 61  KDARTMFHGLQAPTLSIRCYIDRIFKYFGCSPSCFVVANIYVDRFLKCMEIQLTSLNVHR 120
           KD+ T+FHG +AP LSI+ Y +RIFKY  CSPSCFV+A IY++R+L+   + +TSL+VHR
Sbjct: 63  KDSSTIFHGHRAPDLSIKLYAERIFKYSECSPSCFVLALIYMERYLQQPHVYMTSLSVHR 122

Query: 121 LLITSIMLAAKFIDDAFFNNAYYARVGGVSTAELNRLEMKFLFSIDFRLQVSIQTFGRYC 180
           LLITS+++AAKF DDAFFNNA+YARVGG+ST E+NRLE+  LF++DFRL+V ++TFG YC
Sbjct: 123 LLITSVVVAAKFTDDAFFNNAFYARVGGISTVEMNRLELDLLFNLDFRLKVDLETFGSYC 182

Query: 181 YQLEKEGMETRQIERPIR 197
            QLEKE M    I+RPI+
Sbjct: 183 LQLEKETM-VLVIDRPIQ 199

[Close]
BLAST of MS018390 vs. ExPASy Swiss-Prot
Match: Q8LB60 (Cyclin-U3-1 OS=Arabidopsis thaliana OX=3702 GN=CYCU3-1 PE=1 SV=2)

HSP 1 Score: 193.7 bits (491), Expect = 2.1e-48
Identity = 112/209 (53.59%), Postives = 141/209 (67.46%), Query Frame = 0 

Query: 13  SDIYVNLGLKSLRKGIRRNPRVLLLLSSLLERSVQRNELLMEATQVKDARTMFHGLQAPT 72
           SD+Y+ LGL    K +++ P VL  LSS LERS+  N          D+ T+F G   P 
Sbjct: 13  SDVYLRLGLIIEGKRLKKPPTVLSRLSSSLERSLLLNHDDKILLGSPDSVTVFDGRSPPE 72

Query: 73  LSIRCYIDRIFKYFGCSPSCFVVANIYVDRFLKCMEIQLTSLNVHRLLITSIMLAAKFID 132
           +SI  Y+DRIFKY  CSPSCFV+A+IY+D FL      L  LNVHRL+IT++MLAAK  D
Sbjct: 73  ISIAHYLDRIFKYSCCSPSCFVIAHIYIDHFLHKTRALLKPLNVHRLIITTVMLAAKVFD 132

Query: 133 DAFFNNAYYARVGGVSTAELNRLEMKFLFSIDFRLQVSIQTFGRYCYQLEKEGMETRQIE 192
           D +FNNAYYARVGGV+T ELNRLEM+ LF++DF+LQV  QTF  +C QLEK+  +  QIE
Sbjct: 133 DRYFNNAYYARVGGVTTRELNRLEMELLFTLDFKLQVDPQTFHTHCCQLEKQNRDGFQIE 192

Query: 193 RPIR-AC-GIKESWSSKDENSRAS-TTAR 219
            PI+ AC   KE+W  +  +S  S TTAR
Sbjct: 193 WPIKEACRANKETWQKRTPDSLCSQTTAR 221

[Close]
BLAST of MS018390 vs. ExPASy Swiss-Prot
Match: O80513 (Cyclin-U4-1 OS=Arabidopsis thaliana OX=3702 GN=CYCU4-1 PE=1 SV=1)

HSP 1 Score: 161.4 bits (407), Expect = 1.2e-38
Identity = 79/153 (51.63%), Postives = 108/153 (70.59%), Query Frame = 0 

Query: 33  RVLLLLSSLLERSVQRNELLMEATQVKDARTMFHGLQAPTLSIRCYIDRIFKYFGCSPSC 92
           +++  LSSLLER  + N+L           ++FHGL  PT++I+ Y++RIFKY  CSPSC
Sbjct: 12  KLIAFLSSLLERVAESNDLTRRVATQSQRVSVFHGLSRPTITIQSYLERIFKYANCSPSC 71

Query: 93  FVVANIYVDRFL-KCMEIQLTSLNVHRLLITSIMLAAKFIDDAFFNNAYYARVGGVSTAE 152
           FVVA +Y+DRF  +   + + S NVHRLLITS+M+AAKF+DD ++NNAYYA+VGG+ST E
Sbjct: 72  FVVAYVYLDRFTHRQPSLPINSFNVHRLLITSVMVAAKFLDDLYYNNAYYAKVGGISTKE 131

Query: 153 LNRLEMKFLFSIDFRLQVSIQTFGRYCYQLEKE 185
           +N LE+ FLF + F L V+  TF  Y   L+KE
Sbjct: 132 MNFLELDFLFGLGFELNVTPNTFNAYFSYLQKE 164

[Close]
BLAST of MS018390 vs. ExPASy Swiss-Prot
Match: Q9LJ45 (Cyclin-U1-1 OS=Arabidopsis thaliana OX=3702 GN=CYCU1-1 PE=1 SV=1)

HSP 1 Score: 157.5 bits (397), Expect = 1.7e-37
Identity = 78/155 (50.32%), Postives = 112/155 (72.26%), Query Frame = 0 

Query: 32  PRVLLLLSSLLERSVQRNELLMEATQ-VKDARTMFHGLQAPTLSIRCYIDRIFKYFGCSP 91
           PRVL ++S ++E+ V RNE L + T+    +   FHG++AP++SI  Y++RI+KY  CSP
Sbjct: 25  PRVLTIISHVMEKLVARNEWLAKQTKGFGKSLEAFHGVRAPSISIAKYLERIYKYTKCSP 84

Query: 92  SCFVVANIYVDRFL-KCMEIQLTSLNVHRLLITSIMLAAKFIDDAFFNNAYYARVGGVST 151
           +CFVV  +Y+DR   K     + SLNVHRLL+T +M+AAK +DD  +NN +YARVGGVS 
Sbjct: 85  ACFVVGYVYIDRLAHKHPGSLVVSLNVHRLLVTCVMIAAKILDDVHYNNEFYARVGGVSN 144

Query: 152 AELNRLEMKFLFSIDFRLQVSIQTFGRYCYQLEKE 185
           A+LN++E++ LF +DFR+ VS + F  YC+ LEKE
Sbjct: 145 ADLNKMELELLFLLDFRVTVSFRVFESYCFHLEKE 179

[Close]
BLAST of MS018390 vs. ExPASy Swiss-Prot
Match: Q7XC35 (Cyclin-P4-1 OS=Oryza sativa subsp. japonica OX=39947 GN=CYCP4-1 PE=2 SV=1)

HSP 1 Score: 148.7 bits (374), Expect = 7.8e-35
Identity = 79/157 (50.32%), Postives = 106/157 (67.52%), Query Frame = 0 

Query: 32  PRVLLLLSSLLERSVQRNELLMEATQVKD---ARTMFHGLQAPTLSIRCYIDRIFKYFGC 91
           PRV+ +LSSLL+R  +RN+    A  V +   A + F GL  P +SI  Y++RIF++  C
Sbjct: 11  PRVVAILSSLLQRVAERNDAAAAAAAVGEEAAAVSAFQGLTKPAISIGGYLERIFRFANC 70

Query: 92  SPSCFVVANIYVDRFLKCM-EIQLTSLNVHRLLITSIMLAAKFIDDAFFNNAYYARVGGV 151
           SPSC+VVA IY+DRFL+    + + S NVHRLLITS++ A KF+DD  +NNAY+ARVGG+
Sbjct: 71  SPSCYVVAYIYLDRFLRRRPALAVDSFNVHRLLITSVLTAVKFVDDICYNNAYFARVGGI 130

Query: 152 STAELNRLEMKFLFSIDFRLQVSIQTFGRYCYQLEKE 185
           S  E+N LE+ FLF I F L V+   F  YC  L+ E
Sbjct: 131 SLMEMNYLEVDFLFGIAFDLNVTPAAFASYCAVLQSE 167

[Close]
BLAST of MS018390 vs. ExPASy TrEMBL
Match: A0A6J1D9K4 (Cyclin OS=Momordica charantia OX=3673 GN=LOC111018490 PE=3 SV=1)

HSP 1 Score: 426.4 bits (1095), Expect = 7.2e-116
Identity = 218/218 (100.00%), Postives = 218/218 (100.00%), Query Frame = 0 

Query: 1   MAASELETEDVCSDIYVNLGLKSLRKGIRRNPRVLLLLSSLLERSVQRNELLMEATQVKD 60
           MAASELETEDVCSDIYVNLGLKSLRKGIRRNPRVLLLLSSLLERSVQRNELLMEATQVKD
Sbjct: 1   MAASELETEDVCSDIYVNLGLKSLRKGIRRNPRVLLLLSSLLERSVQRNELLMEATQVKD 60

Query: 61  ARTMFHGLQAPTLSIRCYIDRIFKYFGCSPSCFVVANIYVDRFLKCMEIQLTSLNVHRLL 120
           ARTMFHGLQAPTLSIRCYIDRIFKYFGCSPSCFVVANIYVDRFLKCMEIQLTSLNVHRLL
Sbjct: 61  ARTMFHGLQAPTLSIRCYIDRIFKYFGCSPSCFVVANIYVDRFLKCMEIQLTSLNVHRLL 120

Query: 121 ITSIMLAAKFIDDAFFNNAYYARVGGVSTAELNRLEMKFLFSIDFRLQVSIQTFGRYCYQ 180
           ITSIMLAAKFIDDAFFNNAYYARVGGVSTAELNRLEMKFLFSIDFRLQVSIQTFGRYCYQ
Sbjct: 121 ITSIMLAAKFIDDAFFNNAYYARVGGVSTAELNRLEMKFLFSIDFRLQVSIQTFGRYCYQ 180

Query: 181 LEKEGMETRQIERPIRACGIKESWSSKDENSRASTTAR 219
           LEKEGMETRQIERPIRACGIKESWSSKDENSRASTTAR
Sbjct: 181 LEKEGMETRQIERPIRACGIKESWSSKDENSRASTTAR 218

[Close]
BLAST of MS018390 vs. ExPASy TrEMBL
Match: A0A1S3BRA2 (Cyclin OS=Cucumis melo OX=3656 GN=LOC103492671 PE=3 SV=1)

HSP 1 Score: 391.7 bits (1005), Expect = 2.0e-105
Identity = 198/218 (90.83%), Postives = 209/218 (95.87%), Query Frame = 0 

Query: 1   MAASELETEDVCSDIYVNLGLKSLRKGIRRNPRVLLLLSSLLERSVQRNELLMEATQVKD 60
           MAASELE EDVCSDIYVNLGLKSL KGIR+NPRVL LLSSLLERSV++NELLMEATQVKD
Sbjct: 1   MAASELEVEDVCSDIYVNLGLKSLHKGIRKNPRVLTLLSSLLERSVKKNELLMEATQVKD 60

Query: 61  ARTMFHGLQAPTLSIRCYIDRIFKYFGCSPSCFVVANIYVDRFLKCMEIQLTSLNVHRLL 120
           ARTMFHGL+APTLSIRCY+DRIFKYFGCSPSCFV+ANIYVDRFLKC EIQLTSLNVHRLL
Sbjct: 61  ARTMFHGLRAPTLSIRCYMDRIFKYFGCSPSCFVIANIYVDRFLKCTEIQLTSLNVHRLL 120

Query: 121 ITSIMLAAKFIDDAFFNNAYYARVGGVSTAELNRLEMKFLFSIDFRLQVSIQTFGRYCYQ 180
           ITSIMLAAKFIDD+FFNNAYYA+VGGVSTAELN+LEMKFLFSIDFRLQV+IQTFGRYCYQ
Sbjct: 121 ITSIMLAAKFIDDSFFNNAYYAKVGGVSTAELNKLEMKFLFSIDFRLQVNIQTFGRYCYQ 180

Query: 181 LEKEGMETRQIERPIRACGIKESWSSKDENSRASTTAR 219
           LEKEG ETRQIER IRAC IKESWS+KDE S ASTTAR
Sbjct: 181 LEKEGTETRQIERSIRACRIKESWSNKDEKSCASTTAR 218

[Close]
BLAST of MS018390 vs. ExPASy TrEMBL
Match: A0A5D3D4N5 (Cyclin OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold2032G00210 PE=3 SV=1)

HSP 1 Score: 390.2 bits (1001), Expect = 5.7e-105
Identity = 197/218 (90.37%), Postives = 209/218 (95.87%), Query Frame = 0 

Query: 1   MAASELETEDVCSDIYVNLGLKSLRKGIRRNPRVLLLLSSLLERSVQRNELLMEATQVKD 60
           MAASELE EDVCSDIYVNLGLKSL KGIR+NPRVL LLSSLLERSV++NELLMEATQVKD
Sbjct: 1   MAASELEVEDVCSDIYVNLGLKSLHKGIRKNPRVLTLLSSLLERSVKKNELLMEATQVKD 60

Query: 61  ARTMFHGLQAPTLSIRCYIDRIFKYFGCSPSCFVVANIYVDRFLKCMEIQLTSLNVHRLL 120
           ARTMFHGL+APTLSI+CY+DRIFKYFGCSPSCFV+ANIYVDRFLKC EIQLTSLNVHRLL
Sbjct: 61  ARTMFHGLRAPTLSIQCYMDRIFKYFGCSPSCFVIANIYVDRFLKCTEIQLTSLNVHRLL 120

Query: 121 ITSIMLAAKFIDDAFFNNAYYARVGGVSTAELNRLEMKFLFSIDFRLQVSIQTFGRYCYQ 180
           ITSIMLAAKFIDD+FFNNAYYA+VGGVSTAELN+LEMKFLFSIDFRLQV+IQTFGRYCYQ
Sbjct: 121 ITSIMLAAKFIDDSFFNNAYYAKVGGVSTAELNKLEMKFLFSIDFRLQVNIQTFGRYCYQ 180

Query: 181 LEKEGMETRQIERPIRACGIKESWSSKDENSRASTTAR 219
           LEKEG ETRQIER IRAC IKESWS+KDE S ASTTAR
Sbjct: 181 LEKEGTETRQIERSIRACRIKESWSNKDEKSCASTTAR 218

[Close]
BLAST of MS018390 vs. ExPASy TrEMBL
Match: A0A6J1JZK0 (Cyclin OS=Cucurbita maxima OX=3661 GN=LOC111488841 PE=3 SV=1)

HSP 1 Score: 387.1 bits (993), Expect = 4.8e-104
Identity = 197/219 (89.95%), Postives = 208/219 (94.98%), Query Frame = 0 

Query: 1   MAASELETEDVCSDIYVNLGLKSLRKGIRRNPRVLLLLSSLLERSVQRNELLMEATQVKD 60
           MAASEL TED+CSDIYVNLGLKSLRKGIRRNPRVL LLSSLLERSV++NELLMEATQVKD
Sbjct: 1   MAASELGTEDICSDIYVNLGLKSLRKGIRRNPRVLTLLSSLLERSVKKNELLMEATQVKD 60

Query: 61  ARTMFHGLQAPTLSIRCYIDRIFKYFGCSPSCFVVANIYVDRFLKCMEIQLTSLNVHRLL 120
           ARTMFHGL+APTLSIRCYIDRIFKYFGCSPSCFV+ANIYVDRFLKCMEIQLTSLNVHRLL
Sbjct: 61  ARTMFHGLRAPTLSIRCYIDRIFKYFGCSPSCFVIANIYVDRFLKCMEIQLTSLNVHRLL 120

Query: 121 ITSIMLAAKFIDDAFFNNAYYARVGGVSTAELNRLEMKFLFSIDFRLQVSIQTFGRYCYQ 180
           ITSIMLAAKFIDD+FFNNAYYA+VGG+ST ELN+LEMKFLFSIDFRLQV+IQTFGRYCYQ
Sbjct: 121 ITSIMLAAKFIDDSFFNNAYYAKVGGISTTELNKLEMKFLFSIDFRLQVNIQTFGRYCYQ 180

Query: 181 LEKEGMETRQIERPIRACGIKESWSSKDENSRA-STTAR 219
           LEKEG  TRQIER IRAC IKE WS+KDE S A STTAR
Sbjct: 181 LEKEGPGTRQIERSIRACSIKEIWSNKDEKSHASSTTAR 219

[Close]
BLAST of MS018390 vs. ExPASy TrEMBL
Match: A0A0A0K7D6 (Cyclin OS=Cucumis sativus OX=3659 GN=Csa_7G389460 PE=3 SV=1)

HSP 1 Score: 386.7 bits (992), Expect = 6.3e-104
Identity = 195/218 (89.45%), Postives = 208/218 (95.41%), Query Frame = 0 

Query: 1   MAASELETEDVCSDIYVNLGLKSLRKGIRRNPRVLLLLSSLLERSVQRNELLMEATQVKD 60
           MAASELE EDVCSDIY+NLGLKSLRKGIR+NPRVL LLSSLLERSV++NELLMEATQVKD
Sbjct: 1   MAASELEVEDVCSDIYINLGLKSLRKGIRKNPRVLTLLSSLLERSVKKNELLMEATQVKD 60

Query: 61  ARTMFHGLQAPTLSIRCYIDRIFKYFGCSPSCFVVANIYVDRFLKCMEIQLTSLNVHRLL 120
           ARTMFHGL+APTLSIRCYIDRIFKYFGCSPSCFV+ANIYVDRFLKC EIQLTSLNVHRLL
Sbjct: 61  ARTMFHGLRAPTLSIRCYIDRIFKYFGCSPSCFVIANIYVDRFLKCTEIQLTSLNVHRLL 120

Query: 121 ITSIMLAAKFIDDAFFNNAYYARVGGVSTAELNRLEMKFLFSIDFRLQVSIQTFGRYCYQ 180
           ITSIMLAAKFIDD+FFNNAYYA+VGGVSTAE+N+LEMKFLFSIDFRLQV+IQTF RYCYQ
Sbjct: 121 ITSIMLAAKFIDDSFFNNAYYAKVGGVSTAEINKLEMKFLFSIDFRLQVNIQTFSRYCYQ 180

Query: 181 LEKEGMETRQIERPIRACGIKESWSSKDENSRASTTAR 219
           LEKE  ETRQIER IRAC IKE+WS+KDE S ASTTAR
Sbjct: 181 LEKECTETRQIERSIRACRIKENWSNKDEKSCASTTAR 218

[Close]
BLAST of MS018390 vs. TAIR 10
Match: AT3G63120.1 (cyclin p1;1 )

HSP 1 Score: 193.7 bits (491), Expect = 1.5e-49
Identity = 112/209 (53.59%), Postives = 141/209 (67.46%), Query Frame = 0 

Query: 13  SDIYVNLGLKSLRKGIRRNPRVLLLLSSLLERSVQRNELLMEATQVKDARTMFHGLQAPT 72
           SD+Y+ LGL    K +++ P VL  LSS LERS+  N          D+ T+F G   P 
Sbjct: 13  SDVYLRLGLIIEGKRLKKPPTVLSRLSSSLERSLLLNHDDKILLGSPDSVTVFDGRSPPE 72

Query: 73  LSIRCYIDRIFKYFGCSPSCFVVANIYVDRFLKCMEIQLTSLNVHRLLITSIMLAAKFID 132
           +SI  Y+DRIFKY  CSPSCFV+A+IY+D FL      L  LNVHRL+IT++MLAAK  D
Sbjct: 73  ISIAHYLDRIFKYSCCSPSCFVIAHIYIDHFLHKTRALLKPLNVHRLIITTVMLAAKVFD 132

Query: 133 DAFFNNAYYARVGGVSTAELNRLEMKFLFSIDFRLQVSIQTFGRYCYQLEKEGMETRQIE 192
           D +FNNAYYARVGGV+T ELNRLEM+ LF++DF+LQV  QTF  +C QLEK+  +  QIE
Sbjct: 133 DRYFNNAYYARVGGVTTRELNRLEMELLFTLDFKLQVDPQTFHTHCCQLEKQNRDGFQIE 192

Query: 193 RPIR-AC-GIKESWSSKDENSRAS-TTAR 219
            PI+ AC   KE+W  +  +S  S TTAR
Sbjct: 193 WPIKEACRANKETWQKRTPDSLCSQTTAR 221

[Close]
BLAST of MS018390 vs. TAIR 10
Match: AT2G44740.1 (cyclin p4;1 )

HSP 1 Score: 161.4 bits (407), Expect = 8.3e-40
Identity = 79/153 (51.63%), Postives = 108/153 (70.59%), Query Frame = 0 

Query: 33  RVLLLLSSLLERSVQRNELLMEATQVKDARTMFHGLQAPTLSIRCYIDRIFKYFGCSPSC 92
           +++  LSSLLER  + N+L           ++FHGL  PT++I+ Y++RIFKY  CSPSC
Sbjct: 12  KLIAFLSSLLERVAESNDLTRRVATQSQRVSVFHGLSRPTITIQSYLERIFKYANCSPSC 71

Query: 93  FVVANIYVDRFL-KCMEIQLTSLNVHRLLITSIMLAAKFIDDAFFNNAYYARVGGVSTAE 152
           FVVA +Y+DRF  +   + + S NVHRLLITS+M+AAKF+DD ++NNAYYA+VGG+ST E
Sbjct: 72  FVVAYVYLDRFTHRQPSLPINSFNVHRLLITSVMVAAKFLDDLYYNNAYYAKVGGISTKE 131

Query: 153 LNRLEMKFLFSIDFRLQVSIQTFGRYCYQLEKE 185
           +N LE+ FLF + F L V+  TF  Y   L+KE
Sbjct: 132 MNFLELDFLFGLGFELNVTPNTFNAYFSYLQKE 164

[Close]
BLAST of MS018390 vs. TAIR 10
Match: AT3G21870.1 (cyclin p2;1 )

HSP 1 Score: 157.5 bits (397), Expect = 1.2e-38
Identity = 78/155 (50.32%), Postives = 112/155 (72.26%), Query Frame = 0 

Query: 32  PRVLLLLSSLLERSVQRNELLMEATQ-VKDARTMFHGLQAPTLSIRCYIDRIFKYFGCSP 91
           PRVL ++S ++E+ V RNE L + T+    +   FHG++AP++SI  Y++RI+KY  CSP
Sbjct: 25  PRVLTIISHVMEKLVARNEWLAKQTKGFGKSLEAFHGVRAPSISIAKYLERIYKYTKCSP 84

Query: 92  SCFVVANIYVDRFL-KCMEIQLTSLNVHRLLITSIMLAAKFIDDAFFNNAYYARVGGVST 151
           +CFVV  +Y+DR   K     + SLNVHRLL+T +M+AAK +DD  +NN +YARVGGVS 
Sbjct: 85  ACFVVGYVYIDRLAHKHPGSLVVSLNVHRLLVTCVMIAAKILDDVHYNNEFYARVGGVSN 144

Query: 152 AELNRLEMKFLFSIDFRLQVSIQTFGRYCYQLEKE 185
           A+LN++E++ LF +DFR+ VS + F  YC+ LEKE
Sbjct: 145 ADLNKMELELLFLLDFRVTVSFRVFESYCFHLEKE 179

[Close]
BLAST of MS018390 vs. TAIR 10
Match: AT3G05327.1 (Cyclin family protein )

HSP 1 Score: 156.4 bits (394), Expect = 2.7e-38
Identity = 82/159 (51.57%), Postives = 112/159 (70.44%), Query Frame = 0 

Query: 32  PRVLLLLSSLLERSVQRNELLMEATQVK-DARTMFHGLQAPTLSIRCYIDRIFKYFGCSP 91
           PRV+ LL+S LE+ +Q+N+        K D  TMFHG +AP+LSI  Y +RI +Y  CSP
Sbjct: 31  PRVITLLASTLEKMIQKNKKKFHTRHNKADEITMFHGSKAPSLSIYRYTERIHRYAQCSP 90

Query: 92  SCFVVANIYVDRFLKCMEI-----QLTSLNVHRLLITSIMLAAKFIDDAFFNNAYYARVG 151
            CFV A  Y+ R+L+  E      +LTSLNVHRLLITS+++AAKF++   +NNAYYA++G
Sbjct: 91  VCFVAAFAYILRYLQRPEATSTARRLTSLNVHRLLITSLLVAAKFLERQCYNNAYYAKIG 150

Query: 152 GVSTAELNRLEMKFLFSIDFRLQVSIQTFGRYCYQLEKE 185
           GVST E+NRLE  FL  +DFRL ++ +TF ++C  L+KE
Sbjct: 151 GVSTEEMNRLERTFLVDVDFRLYITTETFEKHCLMLQKE 189

[Close]
BLAST of MS018390 vs. TAIR 10
Match: AT5G07450.1 (cyclin p4;3 )

HSP 1 Score: 146.7 bits (369), Expect = 2.1e-35
Identity = 75/165 (45.45%), Postives = 114/165 (69.09%), Query Frame = 0 

Query: 32  PRVLLLLSSLLERSVQRNELLMEATQVKDARTMFHGLQAPTLSIRCYIDRIFKYFGCSPS 91
           P V+  +SSLL+R  + N+ L    +     + F+ +  P++SIR Y++RIFKY  CS S
Sbjct: 21  PNVITAMSSLLQRVSETNDDLSRPFREHKRISAFNAVTKPSISIRSYMERIFKYADCSDS 80

Query: 92  CFVVANIYVDRFL-KCMEIQLTSLNVHRLLITSIMLAAKFIDDAFFNNAYYARVGGVSTA 151
           C++VA IY+DRF+ K   + + S NVHRL+ITS++++AKF+DD  +NNA+YA+VGG++T 
Sbjct: 81  CYIVAYIYLDRFIQKQPLLPIDSSNVHRLIITSVLVSAKFMDDLCYNNAFYAKVGGITTE 140

Query: 152 ELNRLEMKFLFSIDFRLQVSIQTFGRYCYQLEKEGMETRQIERPI 196
           E+N LE+ FLF I F+L V+I T+  YC  L++E M  R +  P+
Sbjct: 141 EMNLLELDFLFGIGFQLNVTISTYNDYCSSLQRE-MVMRTMYSPL 184

The following BLAST results are available for this feature:
BLAST of MS018390 vs. NCBI nr
Match NameE-valueIdentityDescription
XP_022150289.11.5e-115100.00cyclin-P3-1 [Momordica charantia][more]
XP_008451358.14.0e-10590.83PREDICTED: cyclin-P3-1 [Cucumis melo][more]
XP_038899829.16.9e-10590.83cyclin-P3-1 [Benincasa hispida][more]
KAA0064079.11.2e-10490.37cyclin-P3-1 [Cucumis melo var. makuwa] >TYK18502.1 cyclin-P3-1 [Cucumis melo var... [more]
XP_022992552.11.0e-10389.95cyclin-P3-1-like [Cucurbita maxima] >XP_022992553.1 cyclin-P3-1-like [Cucurbita ... [more]
BLAST of MS018390 vs. ExPASy Swiss-Prot
Match NameE-valueIdentityDescription
Q75HV01.5e-5454.55Cyclin-P3-1 OS=Oryza sativa subsp. japonica OX=39947 GN=CYCP3-1 PE=3 SV=1[more]
Q8LB602.1e-4853.59Cyclin-U3-1 OS=Arabidopsis thaliana OX=3702 GN=CYCU3-1 PE=1 SV=2[more]
O805131.2e-3851.63Cyclin-U4-1 OS=Arabidopsis thaliana OX=3702 GN=CYCU4-1 PE=1 SV=1[more]
Q9LJ451.7e-3750.32Cyclin-U1-1 OS=Arabidopsis thaliana OX=3702 GN=CYCU1-1 PE=1 SV=1[more]
Q7XC357.8e-3550.32Cyclin-P4-1 OS=Oryza sativa subsp. japonica OX=39947 GN=CYCP4-1 PE=2 SV=1[more]
BLAST of MS018390 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A6J1D9K47.2e-116100.00Cyclin OS=Momordica charantia OX=3673 GN=LOC111018490 PE=3 SV=1[more]
A0A1S3BRA22.0e-10590.83Cyclin OS=Cucumis melo OX=3656 GN=LOC103492671 PE=3 SV=1[more]
A0A5D3D4N55.7e-10590.37Cyclin OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold2032G00210 PE=3 S... [more]
A0A6J1JZK04.8e-10489.95Cyclin OS=Cucurbita maxima OX=3661 GN=LOC111488841 PE=3 SV=1[more]
A0A0A0K7D66.3e-10489.45Cyclin OS=Cucumis sativus OX=3659 GN=Csa_7G389460 PE=3 SV=1[more]
BLAST of MS018390 vs. TAIR 10
Match NameE-valueIdentityDescription
AT3G63120.11.5e-4953.59cyclin p1;1 [more]
AT2G44740.18.3e-4051.63cyclin p4;1 [more]
AT3G21870.11.2e-3850.32cyclin p2;1 [more]
AT3G05327.12.7e-3851.57Cyclin family protein [more]
AT5G07450.12.1e-3545.45cyclin p4;3 [more]
InterPro
Analysis Name: InterPro Annotations of Bitter gourd (TR) v1
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableGENE3D1.10.472.10coord: 29..217
e-value: 5.1E-51
score: 175.2
NoneNo IPR availablePANTHERPTHR15615:SF80CYCLINcoord: 7..206
NoneNo IPR availablePANTHERPTHR15615UNCHARACTERIZEDcoord: 7..206
IPR012389Cyclin P/UPIRSFPIRSF027110PREGcoord: 14..218
e-value: 6.5E-70
score: 233.1
IPR013922Cyclin PHO80-likePFAMPF08613Cyclincoord: 55..167
e-value: 6.2E-32
score: 111.2
IPR013763Cyclin-likeCDDcd00043CYCLINcoord: 78..160
e-value: 1.8048E-4
score: 37.2181
IPR036915Cyclin-like superfamilySUPERFAMILY47954Cyclin-likecoord: 78..167

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
MS018390.1MS018390.1mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0000079 regulation of cyclin-dependent protein serine/threonine kinase activity
molecular_function GO:0019901 protein kinase binding