MS018366 (gene) Bitter gourd (TR) v1

Overview


Name	MS018366
Type	gene
Organism	Momordica charantia cv. TR (Bitter gourd (TR) v1)
Description	UPF0690 protein C1orf52 homolog
Location	scaffold342: 288321 .. 289613 (-)
RNA-Seq Expression	MS018366
Synteny	MS018366

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGAAAAGACCGATGCCATGGAGTGATGAAGAGGACAATTCGTCATCTAAAGACTCGTCTTTGTCACAGTCAGATTCAGACGCTGATGAAGATAGTGGCGAGACGAAAGCAAGCTTTCGAGTTAAAGCTGGGGGCCGCTCCTCTAAAGAAAAAGACACTCAAGGTTATAATTGCATCCTGGGAAAACGTTTTTCTATTCTCTGCTACTCATGGATACGAATGAAATTTTAACATAAAGCTTCATGGAATCCATTTGTTTGTTCTTCGTTCTGCTTTGTGTTTTCAGTGAATAAAGTTATCCGTATTTTGTCAGATTGAAAAAAAGAGAGAGAGAAAGTGTTTCATACACTGATATGAGAGAGTTCCAATGTCCAATGCTAGATATTTTTCTTTATATGCTCCATTTTGTTTGAACTTTGAAGTACACAACATAGCTTTTGTTCAAGTATATTGCTTTCGATTGCTGGCTTTATTTGTACAAGATTAAAGTAATTGGTTTGTGCCTTTACGGGCATGTTAAGTTTTCCTGAGTTCATTCTGGTTGAACTGATAGGATTAGGCACGCTTAACGAAGATCATAAAATTTTTTCTTTTGGTTCATCAAGAGTAATTAGAAGATAGCCACTTCAAATGGAAGTTGAAGAAAACGGAGGAGTTGTGTTTTTAAATGATATGTCTCTTAGATTTTCGACTATATTGTGAGACTTGTAAATATTCTCTATCTTTAAGTGGTCCTATGAGCATGGAGGGCTGGAAGATTTGGATGTGAACTAAAGAAAACGACCCATTGAATATGTAGTTAGATCATAACAAATAGGGAAAATTTGCTGTATATTTTCAGCATGTATTGTAAATGATAAAAGAAATCCATGTGCTTCATATTTTCTCAGTGGTTATTGCTTCATTTCTACAGTAAAATCTGCAAAGCGGAAGAGCACTGCTGTGGACTTCAATGCGTTGAAACGCCATGGCTACAAAGGTGGACCATCAGTCTTGAATGTGCCACCACCAAAAGAGAATGAGAAGCAAGATTGGTCATGGTCCAATGGTAAGGAGACTCGGGAAAATCGAGAGACTGAAGAATCGTACGAAGAAAGACAGAAAACAAGAGCTGCATTAGAAAACGGAGAGCAGCTGCTAACTGCACAAACTCGAAAGGAGAAGAAGAATATTTCCTTCTCCCAGAAGGAAAAGAGGAAAAGAGAGCTTGGACAAGCAAGCAGGGGGAAAAATTATGTTGAGGAAGAAAAGAGAATGTTGAGGGAAAGTGGCATCTACTCTGGTTTTGATACT

mRNA sequence

ATGAAAAGACCGATGCCATGGAGTGATGAAGAGGACAATTCGTCATCTAAAGACTCGTCTTTGTCACAGTCAGATTCAGACGCTGATGAAGATAGTGGCGAGACGAAAGCAAGCTTTCGAGTTAAAGCTGGGGGCCGCTCCTCTAAAGAAAAAGACACTCAAGTAAAATCTGCAAAGCGGAAGAGCACTGCTGTGGACTTCAATGCGTTGAAACGCCATGGCTACAAAGGTGGACCATCAGTCTTGAATGTGCCACCACCAAAAGAGAATGAGAAGCAAGATTGGTCATGGTCCAATGGTAAGGAGACTCGGGAAAATCGAGAGACTGAAGAATCGTACGAAGAAAGACAGAAAACAAGAGCTGCATTAGAAAACGGAGAGCAGCTGCTAACTGCACAAACTCGAAAGGAGAAGAAGAATATTTCCTTCTCCCAGAAGGAAAAGAGGAAAAGAGAGCTTGGACAAGCAAGCAGGGGGAAAAATTATGTTGAGGAAGAAAAGAGAATGTTGAGGGAAAGTGGCATCTACTCTGGTTTTGATACT

Coding sequence (CDS)

ATGAAAAGACCGATGCCATGGAGTGATGAAGAGGACAATTCGTCATCTAAAGACTCGTCTTTGTCACAGTCAGATTCAGACGCTGATGAAGATAGTGGCGAGACGAAAGCAAGCTTTCGAGTTAAAGCTGGGGGCCGCTCCTCTAAAGAAAAAGACACTCAAGTAAAATCTGCAAAGCGGAAGAGCACTGCTGTGGACTTCAATGCGTTGAAACGCCATGGCTACAAAGGTGGACCATCAGTCTTGAATGTGCCACCACCAAAAGAGAATGAGAAGCAAGATTGGTCATGGTCCAATGGTAAGGAGACTCGGGAAAATCGAGAGACTGAAGAATCGTACGAAGAAAGACAGAAAACAAGAGCTGCATTAGAAAACGGAGAGCAGCTGCTAACTGCACAAACTCGAAAGGAGAAGAAGAATATTTCCTTCTCCCAGAAGGAAAAGAGGAAAAGAGAGCTTGGACAAGCAAGCAGGGGGAAAAATTATGTTGAGGAAGAAAAGAGAATGTTGAGGGAAAGTGGCATCTACTCTGGTTTTGATACT

Protein sequence

MKRPMPWSDEEDNSSSKDSSLSQSDSDADEDSGETKASFRVKAGGRSSKEKDTQVKSAKRKSTAVDFNALKRHGYKGGPSVLNVPPPKENEKQDWSWSNGKETRENRETEESYEERQKTRAALENGEQLLTAQTRKEKKNISFSQKEKRKRELGQASRGKNYVEEEKRMLRESGIYSGFDT

Homology

[Close]

BLAST of MS018366 vs. NCBI nr
Match: XP_022150145.1 (UPF0690 protein C1orf52 homolog [Momordica charantia] >XP_022150146.1 UPF0690 protein C1orf52 homolog [Momordica charantia])

HSP 1 Score: 331.3 bits (848), Expect = 5.4e-87
Identity = 181/181 (100.00%), Postives = 181/181 (100.00%), Query Frame = 0


Query: 1   MKRPMPWSDEEDNSSSKDSSLSQSDSDADEDSGETKASFRVKAGGRSSKEKDTQVKSAKR 60
           MKRPMPWSDEEDNSSSKDSSLSQSDSDADEDSGETKASFRVKAGGRSSKEKDTQVKSAKR
Sbjct: 1   MKRPMPWSDEEDNSSSKDSSLSQSDSDADEDSGETKASFRVKAGGRSSKEKDTQVKSAKR 60

Query: 61  KSTAVDFNALKRHGYKGGPSVLNVPPPKENEKQDWSWSNGKETRENRETEESYEERQKTR 120
           KSTAVDFNALKRHGYKGGPSVLNVPPPKENEKQDWSWSNGKETRENRETEESYEERQKTR
Sbjct: 61  KSTAVDFNALKRHGYKGGPSVLNVPPPKENEKQDWSWSNGKETRENRETEESYEERQKTR 120

Query: 121 AALENGEQLLTAQTRKEKKNISFSQKEKRKRELGQASRGKNYVEEEKRMLRESGIYSGFD 180
           AALENGEQLLTAQTRKEKKNISFSQKEKRKRELGQASRGKNYVEEEKRMLRESGIYSGFD
Sbjct: 121 AALENGEQLLTAQTRKEKKNISFSQKEKRKRELGQASRGKNYVEEEKRMLRESGIYSGFD 180

Query: 181 T 182
           T
Sbjct: 181 T 181

[Close]

BLAST of MS018366 vs. NCBI nr
Match: XP_022991319.1 (UPF0690 protein C1orf52 homolog [Cucurbita maxima] >XP_023547485.1 UPF0690 protein C1orf52 homolog [Cucurbita pepo subsp. pepo] >XP_023547486.1 UPF0690 protein C1orf52 homolog [Cucurbita pepo subsp. pepo])

HSP 1 Score: 291.2 bits (744), Expect = 6.2e-75
Identity = 163/181 (90.06%), Postives = 169/181 (93.37%), Query Frame = 0


Query: 1   MKRPMPWSDEEDNSSSKDSSLSQSDSDADEDSGETKASFRVKAGGRSSKEKDTQVKSAKR 60
           MKR MPWSDEEDNSSSK+SSLSQSDSDADEDSG+ KA FRVKA GRSSKEK T+VKS KR
Sbjct: 1   MKRAMPWSDEEDNSSSKESSLSQSDSDADEDSGDAKAIFRVKA-GRSSKEKGTEVKSGKR 60

Query: 61  KSTAVDFNALKRHGYKGGPSVLNVPPPKENEKQDWSWSNGKETRENRETEESYEERQKTR 120
           KS AVDF+ LKRHGYKGGPSVL VPPPKENEKQDWSWS G+ETRENRETEESYEERQKTR
Sbjct: 61  KSIAVDFDTLKRHGYKGGPSVLKVPPPKENEKQDWSWSTGRETRENRETEESYEERQKTR 120

Query: 121 AALENGEQLLTAQTRKEKKNISFSQKEKRKRELGQASRGKNYVEEEKRMLRESGIYSGFD 180
           AALENGEQLLTA T+KEKKNISFSQKEKRKRELGQASRGKNYVEEEKR LRESGIYSGFD
Sbjct: 121 AALENGEQLLTALTQKEKKNISFSQKEKRKRELGQASRGKNYVEEEKRTLRESGIYSGFD 180

Query: 181 T 182
           T
Sbjct: 181 T 180

[Close]

BLAST of MS018366 vs. NCBI nr
Match: XP_022953507.1 (UPF0690 protein C1orf52 homolog [Cucurbita moschata] >KAG7014460.1 hypothetical protein SDJN02_24637 [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 288.9 bits (738), Expect = 3.1e-74
Identity = 161/181 (88.95%), Postives = 169/181 (93.37%), Query Frame = 0


Query: 1   MKRPMPWSDEEDNSSSKDSSLSQSDSDADEDSGETKASFRVKAGGRSSKEKDTQVKSAKR 60
           MKR MPWSDEEDNSSSK+SSLSQSDSDADEDSG+ KA FRVKA GRSSKEK T+VKS KR
Sbjct: 1   MKRAMPWSDEEDNSSSKESSLSQSDSDADEDSGDAKAIFRVKA-GRSSKEKGTEVKSGKR 60

Query: 61  KSTAVDFNALKRHGYKGGPSVLNVPPPKENEKQDWSWSNGKETRENRETEESYEERQKTR 120
           K+ AVDF+ LKRHGYKGGPSVL VPPPKENEKQDWSWS G+ETRENR+TEESYEERQKTR
Sbjct: 61  KNIAVDFDTLKRHGYKGGPSVLKVPPPKENEKQDWSWSTGRETRENRDTEESYEERQKTR 120

Query: 121 AALENGEQLLTAQTRKEKKNISFSQKEKRKRELGQASRGKNYVEEEKRMLRESGIYSGFD 180
           AALENGEQLLTA T+KEKKNISFSQKEKRKRELGQASRGKNYVEEEKR LRESGIYSGFD
Sbjct: 121 AALENGEQLLTALTQKEKKNISFSQKEKRKRELGQASRGKNYVEEEKRTLRESGIYSGFD 180

Query: 181 T 182
           T
Sbjct: 181 T 180

[Close]

BLAST of MS018366 vs. NCBI nr
Match: KAG6575926.1 (hypothetical protein SDJN03_26565, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 283.5 bits (724), Expect = 1.3e-72
Identity = 158/177 (89.27%), Postives = 166/177 (93.79%), Query Frame = 0


Query: 5   MPWSDEEDNSSSKDSSLSQSDSDADEDSGETKASFRVKAGGRSSKEKDTQVKSAKRKSTA 64
           MPWSDEEDNSSSK+SSLSQSDSDADEDSG+ KA FRVKA GRSSKEK T+VKS KRK+ A
Sbjct: 1   MPWSDEEDNSSSKESSLSQSDSDADEDSGDAKAIFRVKA-GRSSKEKGTEVKSGKRKNIA 60

Query: 65  VDFNALKRHGYKGGPSVLNVPPPKENEKQDWSWSNGKETRENRETEESYEERQKTRAALE 124
           VDF+ LKRHGYKGGPSVL VPPPKENEKQDWSWS G+ETRENR+TEESYEERQKTRAALE
Sbjct: 61  VDFDTLKRHGYKGGPSVLKVPPPKENEKQDWSWSTGRETRENRDTEESYEERQKTRAALE 120

Query: 125 NGEQLLTAQTRKEKKNISFSQKEKRKRELGQASRGKNYVEEEKRMLRESGIYSGFDT 182
           NGEQLLTA T+KEKKNISFSQKEKRKRELGQASRGKNYVEEEKR LRESGIYSGFDT
Sbjct: 121 NGEQLLTALTQKEKKNISFSQKEKRKRELGQASRGKNYVEEEKRTLRESGIYSGFDT 176

[Close]

BLAST of MS018366 vs. NCBI nr
Match: XP_038896833.1 (UPF0690 protein C1orf52 homolog isoform X1 [Benincasa hispida])

HSP 1 Score: 279.3 bits (713), Expect = 2.4e-71
Identity = 163/190 (85.79%), Postives = 169/190 (88.95%), Query Frame = 0


Query: 1   MKRPMPWSDEEDNSSSKDSSLSQSDSDADEDSGETKASFRVKAGGRSSKEKDTQVKS-AK 60
           MKR +PWSDEEDNS    SSLSQSDSDADED+GETKASFRVKA GRSSKEKD +VKS  K
Sbjct: 1   MKRAIPWSDEEDNS----SSLSQSDSDADEDNGETKASFRVKA-GRSSKEKDVEVKSGGK 60

Query: 61  RKSTAVDFNALKRHGYKGGPSVLNVPPPKENEKQDWSWSNGKETRENRETEESYEERQKT 120
           RKS AVDF+ LKRHGYKGGPSVL VPPPKENEKQDWSWS G+ETRENRETEESYEERQKT
Sbjct: 61  RKSVAVDFDTLKRHGYKGGPSVLKVPPPKENEKQDWSWSTGRETRENRETEESYEERQKT 120

Query: 121 RAALENGEQLLTAQTR--------KEKKNISFSQKEKRKRELGQASRGKNYVEEEKRMLR 180
           RAALENGEQLLTAQTR        KEKKN+SFSQKEKRKRELGQASRGKNYVEEEKRMLR
Sbjct: 121 RAALENGEQLLTAQTRKEKEKEKEKEKKNVSFSQKEKRKRELGQASRGKNYVEEEKRMLR 180

Query: 181 ESGIYSGFDT 182
           ESGIYSGFDT
Sbjct: 181 ESGIYSGFDT 185

[Close]

BLAST of MS018366 vs. ExPASy TrEMBL
Match: A0A6J1DAL0 (UPF0690 protein C1orf52 homolog OS=Momordica charantia OX=3673 GN=LOC111018397 PE=4 SV=1)

HSP 1 Score: 331.3 bits (848), Expect = 2.6e-87
Identity = 181/181 (100.00%), Postives = 181/181 (100.00%), Query Frame = 0


Query: 1   MKRPMPWSDEEDNSSSKDSSLSQSDSDADEDSGETKASFRVKAGGRSSKEKDTQVKSAKR 60
           MKRPMPWSDEEDNSSSKDSSLSQSDSDADEDSGETKASFRVKAGGRSSKEKDTQVKSAKR
Sbjct: 1   MKRPMPWSDEEDNSSSKDSSLSQSDSDADEDSGETKASFRVKAGGRSSKEKDTQVKSAKR 60

Query: 61  KSTAVDFNALKRHGYKGGPSVLNVPPPKENEKQDWSWSNGKETRENRETEESYEERQKTR 120
           KSTAVDFNALKRHGYKGGPSVLNVPPPKENEKQDWSWSNGKETRENRETEESYEERQKTR
Sbjct: 61  KSTAVDFNALKRHGYKGGPSVLNVPPPKENEKQDWSWSNGKETRENRETEESYEERQKTR 120

Query: 121 AALENGEQLLTAQTRKEKKNISFSQKEKRKRELGQASRGKNYVEEEKRMLRESGIYSGFD 180
           AALENGEQLLTAQTRKEKKNISFSQKEKRKRELGQASRGKNYVEEEKRMLRESGIYSGFD
Sbjct: 121 AALENGEQLLTAQTRKEKKNISFSQKEKRKRELGQASRGKNYVEEEKRMLRESGIYSGFD 180

Query: 181 T 182
           T
Sbjct: 181 T 181

[Close]

BLAST of MS018366 vs. ExPASy TrEMBL
Match: A0A6J1JUH2 (UPF0690 protein C1orf52 homolog OS=Cucurbita maxima OX=3661 GN=LOC111488002 PE=4 SV=1)

HSP 1 Score: 291.2 bits (744), Expect = 3.0e-75
Identity = 163/181 (90.06%), Postives = 169/181 (93.37%), Query Frame = 0


Query: 1   MKRPMPWSDEEDNSSSKDSSLSQSDSDADEDSGETKASFRVKAGGRSSKEKDTQVKSAKR 60
           MKR MPWSDEEDNSSSK+SSLSQSDSDADEDSG+ KA FRVKA GRSSKEK T+VKS KR
Sbjct: 1   MKRAMPWSDEEDNSSSKESSLSQSDSDADEDSGDAKAIFRVKA-GRSSKEKGTEVKSGKR 60

Query: 61  KSTAVDFNALKRHGYKGGPSVLNVPPPKENEKQDWSWSNGKETRENRETEESYEERQKTR 120
           KS AVDF+ LKRHGYKGGPSVL VPPPKENEKQDWSWS G+ETRENRETEESYEERQKTR
Sbjct: 61  KSIAVDFDTLKRHGYKGGPSVLKVPPPKENEKQDWSWSTGRETRENRETEESYEERQKTR 120

Query: 121 AALENGEQLLTAQTRKEKKNISFSQKEKRKRELGQASRGKNYVEEEKRMLRESGIYSGFD 180
           AALENGEQLLTA T+KEKKNISFSQKEKRKRELGQASRGKNYVEEEKR LRESGIYSGFD
Sbjct: 121 AALENGEQLLTALTQKEKKNISFSQKEKRKRELGQASRGKNYVEEEKRTLRESGIYSGFD 180

Query: 181 T 182
           T
Sbjct: 181 T 180

[Close]

BLAST of MS018366 vs. ExPASy TrEMBL
Match: A0A6J1GNF0 (UPF0690 protein C1orf52 homolog OS=Cucurbita moschata OX=3662 GN=LOC111456036 PE=4 SV=1)

HSP 1 Score: 288.9 bits (738), Expect = 1.5e-74
Identity = 161/181 (88.95%), Postives = 169/181 (93.37%), Query Frame = 0


Query: 1   MKRPMPWSDEEDNSSSKDSSLSQSDSDADEDSGETKASFRVKAGGRSSKEKDTQVKSAKR 60
           MKR MPWSDEEDNSSSK+SSLSQSDSDADEDSG+ KA FRVKA GRSSKEK T+VKS KR
Sbjct: 1   MKRAMPWSDEEDNSSSKESSLSQSDSDADEDSGDAKAIFRVKA-GRSSKEKGTEVKSGKR 60

Query: 61  KSTAVDFNALKRHGYKGGPSVLNVPPPKENEKQDWSWSNGKETRENRETEESYEERQKTR 120
           K+ AVDF+ LKRHGYKGGPSVL VPPPKENEKQDWSWS G+ETRENR+TEESYEERQKTR
Sbjct: 61  KNIAVDFDTLKRHGYKGGPSVLKVPPPKENEKQDWSWSTGRETRENRDTEESYEERQKTR 120

Query: 121 AALENGEQLLTAQTRKEKKNISFSQKEKRKRELGQASRGKNYVEEEKRMLRESGIYSGFD 180
           AALENGEQLLTA T+KEKKNISFSQKEKRKRELGQASRGKNYVEEEKR LRESGIYSGFD
Sbjct: 121 AALENGEQLLTALTQKEKKNISFSQKEKRKRELGQASRGKNYVEEEKRTLRESGIYSGFD 180

Query: 181 T 182
           T
Sbjct: 181 T 180

[Close]

BLAST of MS018366 vs. ExPASy TrEMBL
Match: A0A5D3DRL7 (UPF0690 protein C1orf52-like protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold111G00990 PE=4 SV=1)

HSP 1 Score: 278.5 bits (711), Expect = 2.0e-71
Identity = 162/192 (84.38%), Postives = 169/192 (88.02%), Query Frame = 0


Query: 1   MKRPMPWSDEEDNSSSKDSSLSQSDSDADEDSGETKASFRVKAGGRSSKEKDTQVKS-AK 60
           MKR MPWSDEEDNS    SSLSQSDSD DED+GETKASFRVK GGRSSKEKDT+VKS  K
Sbjct: 1   MKRAMPWSDEEDNS----SSLSQSDSDGDEDNGETKASFRVK-GGRSSKEKDTEVKSGGK 60

Query: 61  RKSTAVDFNALKRHGYKGGPSVLNVPPPKENEKQDWSWSNGKETRENRETEESYEERQKT 120
           RKS AVDF+ L+RHGY+GGPSVL VPPPKENEKQDWSWS G+ETRENRETEESYEERQKT
Sbjct: 61  RKSVAVDFDTLQRHGYRGGPSVLKVPPPKENEKQDWSWSTGRETRENRETEESYEERQKT 120

Query: 121 RAALENGEQLLTAQTRK----------EKKNISFSQKEKRKRELGQASRGKNYVEEEKRM 180
           RAALENGEQLLTAQTRK          EKKN+SFSQKEKRKRELGQASRGKNYVEEEKRM
Sbjct: 121 RAALENGEQLLTAQTRKEKEREKEKEREKKNVSFSQKEKRKRELGQASRGKNYVEEEKRM 180

Query: 181 LRESGIYSGFDT 182
           LRESGIYSGFDT
Sbjct: 181 LRESGIYSGFDT 187

[Close]

BLAST of MS018366 vs. ExPASy TrEMBL
Match: A0A1S3BRX7 (Uncharacterized protein OS=Cucumis melo OX=3656 GN=LOC103492638 PE=4 SV=1)

HSP 1 Score: 278.5 bits (711), Expect = 2.0e-71
Identity = 162/192 (84.38%), Postives = 169/192 (88.02%), Query Frame = 0


Query: 1   MKRPMPWSDEEDNSSSKDSSLSQSDSDADEDSGETKASFRVKAGGRSSKEKDTQVKS-AK 60
           MKR MPWSDEEDNS    SSLSQSDSD DED+GETKASFRVK GGRSSKEKDT+VKS  K
Sbjct: 1   MKRAMPWSDEEDNS----SSLSQSDSDGDEDNGETKASFRVK-GGRSSKEKDTEVKSGGK 60

Query: 61  RKSTAVDFNALKRHGYKGGPSVLNVPPPKENEKQDWSWSNGKETRENRETEESYEERQKT 120
           RKS AVDF+ L+RHGY+GGPSVL VPPPKENEKQDWSWS G+ETRENRETEESYEERQKT
Sbjct: 61  RKSVAVDFDTLQRHGYRGGPSVLKVPPPKENEKQDWSWSTGRETRENRETEESYEERQKT 120

Query: 121 RAALENGEQLLTAQTRK----------EKKNISFSQKEKRKRELGQASRGKNYVEEEKRM 180
           RAALENGEQLLTAQTRK          EKKN+SFSQKEKRKRELGQASRGKNYVEEEKRM
Sbjct: 121 RAALENGEQLLTAQTRKEKEREKEKEREKKNVSFSQKEKRKRELGQASRGKNYVEEEKRM 180

Query: 181 LRESGIYSGFDT 182
           LRESGIYSGFDT
Sbjct: 181 LRESGIYSGFDT 187

[Close]

BLAST of MS018366 vs. TAIR 10
Match: AT4G04614.1 (unknown protein; Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). )

HSP 1 Score: 132.9 bits (333), Expect = 2.6e-31
Identity = 90/183 (49.18%), Postives = 121/183 (66.12%), Query Frame = 0


Query: 5   MPWSDEED----NSSSKDSSLSQSDSDADE-DSGETKASFRVKAGGRSSKEKDTQVKSAK 64
           M W D++D    +SS + SS S SDS+ D  + GE K         +  K K    + AK
Sbjct: 6   MRWDDDDDDDDEDSSEESSSSSASDSNVDNTEIGEKK---------KKRKSKKPIARFAK 65

Query: 65  RKSTAVDFNALKRHGYKGGPSVLNVPPPKENEKQDWSWSNGKETRENRETEESYEERQKT 124
           +   A D+ +L++HGYK    + ++P P   EKQDWSW+ GK+ +   E +ESY+ER+ T
Sbjct: 66  KDKKAFDYESLQQHGYK-AVGLSDIPAPM--EKQDWSWTTGKDKQRVEEVKESYQEREAT 125

Query: 125 R-AALENGEQLLTAQTRKEKKNISFSQKEKRKRELGQASRGKNYVEEEKRMLRESGIYSG 182
           R AA+  GE +  AQ R ++KN+SFSQKEK+KR+LGQASRGKNYVEEEKR LRESG+YSG
Sbjct: 126 RAAAVTGGETIANAQLRNDRKNLSFSQKEKKKRDLGQASRGKNYVEEEKRQLRESGVYSG 176

The following BLAST results are available for this feature:

BLAST of MS018366 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022150145.1	5.4e-87	100.00	UPF0690 protein C1orf52 homolog [Momordica charantia] >XP_022150146.1 UPF0690 pr...	[more]
XP_022991319.1	6.2e-75	90.06	UPF0690 protein C1orf52 homolog [Cucurbita maxima] >XP_023547485.1 UPF0690 prote...	[more]
XP_022953507.1	3.1e-74	88.95	UPF0690 protein C1orf52 homolog [Cucurbita moschata] >KAG7014460.1 hypothetical ...	[more]
KAG6575926.1	1.3e-72	89.27	hypothetical protein SDJN03_26565, partial [Cucurbita argyrosperma subsp. sorori...	[more]
XP_038896833.1	2.4e-71	85.79	UPF0690 protein C1orf52 homolog isoform X1 [Benincasa hispida]	[more]

BLAST of MS018366 vs. NCBI nr


Match Name	E-value	Identity	Description

BLAST of MS018366 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1DAL0	2.6e-87	100.00	UPF0690 protein C1orf52 homolog OS=Momordica charantia OX=3673 GN=LOC111018397 P...	[more]
A0A6J1JUH2	3.0e-75	90.06	UPF0690 protein C1orf52 homolog OS=Cucurbita maxima OX=3661 GN=LOC111488002 PE=4...	[more]
A0A6J1GNF0	1.5e-74	88.95	UPF0690 protein C1orf52 homolog OS=Cucurbita moschata OX=3662 GN=LOC111456036 PE...	[more]
A0A5D3DRL7	2.0e-71	84.38	UPF0690 protein C1orf52-like protein OS=Cucumis melo var. makuwa OX=1194695 GN=E...	[more]
A0A1S3BRX7	2.0e-71	84.38	Uncharacterized protein OS=Cucumis melo OX=3656 GN=LOC103492638 PE=4 SV=1	[more]

BLAST of MS018366 vs. TAIR 10


Match Name	E-value	Identity	Description
AT4G04614.1	2.6e-31	49.18	unknown protein; Has 35333 Blast hits to 34131 proteins in 2444 species: Archae ...	[more]

InterPro

Analysis Name: InterPro Annotations of Bitter gourd (TR) v1
Date Performed: 2021-10-25

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..16
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 94..122
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 131..173
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 29..59
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..181
None	No IPR available	PANTHER	PTHR31833	UPF0690 PROTEIN C1ORF52	coord: 1..181

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
MS018366.1	MS018366.1	mRNA