Sequences
The following sequences are available for this feature:
Gene sequence (with intron)
Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
CTGATTCAGCTAATATTCTCGAAACTACCATTTGTAAATTTGCCCACTTGTCGGCTCGTCCGTAAAGCATGGAACAATATGGTTTTAAGTTGCAAGTTCGATCCTCCAATCTTCTTTTTTGCCCATATTTCTTCCTTTCTGAATCTTCATTGTGTGGACTTGGATCCTAAATATTTGGAAGGAATGAACAGTGTTGCAAGATTTAACTTCCATCCTGATTTTTATTTGTCCTTCACTTGTATCTCAATCATCAACTCCTGCAATGGACTCCTCTGTTGTTCTTTTGACTCCATAAGAAGATGTTGCGAAGCTTGCATATTAAATCCCATGACAAACGAGTACTTCAAACCTCCCACCTCCAGTTCCAATCATAAGGATATAGATTATTATTACGGATTAGGATTTAGTCTTAGAACAAAGCACTACAAATTGGCAAGACTCTCATTTGTACATGAGAGTAGCTTCGTGGAGATTTTTGCATTTGGTAGTACTACAAGTCCAAGTCCCGAATGGACCCCTATAGAATTTGTGTCTTTTTGCATTGATGACGATGGTGTTTACTTCAATGGAGGCCTGTATTGGGTGGTTGCATATGATACAATTGTCGTCATTATTCGTTTGGATATTGAAGATGAGAAATTGGACCAAATTTCTTCTCCCCAACTTAGCCGAGATGTCATTGCCTTTGTCGTTGGAGTCTCTAATGACATCCTCTATCTAACTTTTTGCATAGACTTAGAATTTAAGTACCATGTGTGGAAGATGGAAGAAGATTTTTCATGGGCTAAAGCATTTGTGGTTGCCGTTCCAAAATATTTGCATTATCCATTTGATGGCTTCCAACTCATCAAAATCTGTGAAGATGGAAACATCCTGTGTCTTGTTGATGAATTCTATTTAATCTTGTGTGACCCAAAGACTAAGAGAATTAAGTTATTGATGGGTCATGAAATTAAGAAAAATTTATGGATTCATCAGATCGAGTCTTTCAATTTTGGTTCTCTTCACAAAATTTTAGTAGGAGCACGGGAT
mRNA sequence
CTGATTCAGCTAATATTCTCGAAACTACCATTTGTAAATTTGCCCACTTGTCGGCTCGTCCGTAAAGCATGGAACAATATGGTTTTAAGTTGCAAGTTCGATCCTCCAATCTTCTTTTTTGCCCATATTTCTTCCTTTCTGAATCTTCATTGTGTGGACTTGGATCCTAAATATTTGGAAGGAATGAACAGTGTTGCAAGATTTAACTTCCATCCTGATTTTTATTTGTCCTTCACTTGTATCTCAATCATCAACTCCTGCAATGGACTCCTCTGTTGTTCTTTTGACTCCATAAGAAGATGTTGCGAAGCTTGCATATTAAATCCCATGACAAACGAGTACTTCAAACCTCCCACCTCCAGTTCCAATCATAAGGATATAGATTATTATTACGGATTAGGATTTAGTCTTAGAACAAAGCACTACAAATTGGCAAGACTCTCATTTGTACATGAGAGTAGCTTCGTGGAGATTTTTGCATTTGGTAGTACTACAAGTCCAAGTCCCGAATGGACCCCTATAGAATTTGTGTCTTTTTGCATTGATGACGATGGTGTTTACTTCAATGGAGGCCTGTATTGGGTGGTTGCATATGATACAATTGTCGTCATTATTCGTTTGGATATTGAAGATGAGAAATTGGACCAAATTTCTTCTCCCCAACTTAGCCGAGATGTCATTGCCTTTGTCGTTGGAGTCTCTAATGACATCCTCTATCTAACTTTTTGCATAGACTTAGAATTTAAGTACCATGTGTGGAAGATGGAAGAAGATTTTTCATGGGCTAAAGCATTTGTGGTTGCCGTTCCAAAATATTTGCATTATCCATTTGATGGCTTCCAACTCATCAAAATCTGTGAAGATGGAAACATCCTGTGTCTTGTTGATGAATTCTATTTAATCTTGTGTGACCCAAAGACTAAGAGAATTAAGTTATTGATGGGTCATGAAATTAAGAAAAATTTATGGATTCATCAGATCGAGTCTTTCAATTTTGGTTCTCTTCACAAAATTTTAGTAGGAGCACGGGAT
Coding sequence (CDS)
CTGATTCAGCTAATATTCTCGAAACTACCATTTGTAAATTTGCCCACTTGTCGGCTCGTCCGTAAAGCATGGAACAATATGGTTTTAAGTTGCAAGTTCGATCCTCCAATCTTCTTTTTTGCCCATATTTCTTCCTTTCTGAATCTTCATTGTGTGGACTTGGATCCTAAATATTTGGAAGGAATGAACAGTGTTGCAAGATTTAACTTCCATCCTGATTTTTATTTGTCCTTCACTTGTATCTCAATCATCAACTCCTGCAATGGACTCCTCTGTTGTTCTTTTGACTCCATAAGAAGATGTTGCGAAGCTTGCATATTAAATCCCATGACAAACGAGTACTTCAAACCTCCCACCTCCAGTTCCAATCATAAGGATATAGATTATTATTACGGATTAGGATTTAGTCTTAGAACAAAGCACTACAAATTGGCAAGACTCTCATTTGTACATGAGAGTAGCTTCGTGGAGATTTTTGCATTTGGTAGTACTACAAGTCCAAGTCCCGAATGGACCCCTATAGAATTTGTGTCTTTTTGCATTGATGACGATGGTGTTTACTTCAATGGAGGCCTGTATTGGGTGGTTGCATATGATACAATTGTCGTCATTATTCGTTTGGATATTGAAGATGAGAAATTGGACCAAATTTCTTCTCCCCAACTTAGCCGAGATGTCATTGCCTTTGTCGTTGGAGTCTCTAATGACATCCTCTATCTAACTTTTTGCATAGACTTAGAATTTAAGTACCATGTGTGGAAGATGGAAGAAGATTTTTCATGGGCTAAAGCATTTGTGGTTGCCGTTCCAAAATATTTGCATTATCCATTTGATGGCTTCCAACTCATCAAAATCTGTGAAGATGGAAACATCCTGTGTCTTGTTGATGAATTCTATTTAATCTTGTGTGACCCAAAGACTAAGAGAATTAAGTTATTGATGGGTCATGAAATTAAGAAAAATTTATGGATTCATCAGATCGAGTCTTTCAATTTTGGTTCTCTTCACAAAATTTTAGTAGGAGCACGGGAT
Protein sequence
LIQLIFSKLPFVNLPTCRLVRKAWNNMVLSCKFDPPIFFFAHISSFLNLHCVDLDPKYLEGMNSVARFNFHPDFYLSFTCISIINSCNGLLCCSFDSIRRCCEACILNPMTNEYFKPPTSSSNHKDIDYYYGLGFSLRTKHYKLARLSFVHESSFVEIFAFGSTTSPSPEWTPIEFVSFCIDDDGVYFNGGLYWVVAYDTIVVIIRLDIEDEKLDQISSPQLSRDVIAFVVGVSNDILYLTFCIDLEFKYHVWKMEEDFSWAKAFVVAVPKYLHYPFDGFQLIKICEDGNILCLVDEFYLILCDPKTKRIKLLMGHEIKKNLWIHQIESFNFGSLHKILVGARD
Homology
BLAST of MS018193 vs. NCBI nr
Match:
XP_038880514.1 (putative F-box protein At1g46984 [Benincasa hispida])
HSP 1 Score: 353.2 bits (905), Expect = 2.5e-93
Identity = 201/368 (54.62%), Postives = 238/368 (64.67%), Query Frame = 0
Query: 1 LIQLIFSKLPFVNLPTCRLVRKAWNNMVLSCKFDPPI----FFFAHISSF--LNLHCVDL 60
++QLIFSKLPF NLPTCRLV WNN+VLSCKFDP I FFAH S NLHCVDL
Sbjct: 20 ILQLIFSKLPFFNLPTCRLVSATWNNLVLSCKFDPSISISNLFFAHFYSCRDRNLHCVDL 79
Query: 61 DPKYLEGMNSVARFNFHPDFYLSFTCISIINSCNGLLCCSFDSIRRCCE----ACILNPM 120
DP++LEGM++VA F FHP+ ISIINSC+GL+ RR C+LNPM
Sbjct: 80 DPQHLEGMSTVASFTFHPNVSSGSCKISIINSCSGLISLLITKRRRRGHRPGVVCVLNPM 139
Query: 121 TNEYFKPPTSSSNHKDI-DYYYGLGFSLRTKHYKLARLSFVHESSFVEIFAFGSTTSPSP 180
TNEYFK PT S + DY+YGLGFS RTK YKLAR +V VEIFAFG+ S
Sbjct: 140 TNEYFKLPTFRSKGDSVKDYFYGLGFSPRTKQYKLARTHYVCHEFIVEIFAFGT----SC 199
Query: 181 EWTPIEFVSFCIDD-DGVYFNGGLYWVVAYD-----TIVVIIRLDIEDEKLDQISSPQLS 240
EWTP+ V + +++ GVYFNGGLYWV VI RLD+ED+K QIS P
Sbjct: 200 EWTPVGSVPYFLNEYHGVYFNGGLYWVGGQQLPNAGLSDVIYRLDLEDDKFKQISFPLDG 259
Query: 241 RDVIAF-VVGVSNDILYLTFCIDLEFKYHVWKMEEDFSWAKAFVVAVPKYLHYPFDG--- 300
D F +GV ND LYLT C +F+YHVWKMEEDFSW K FV+A+P+ +H+
Sbjct: 260 DDEGDFPYIGVYNDTLYLTLCCG-DFEYHVWKMEEDFSWIKEFVLALPENVHHSLPRHHP 319
Query: 301 ----FQLIKICEDGNILCLVDEFYLILCDPKTKRIKLL--MGHEIKKNLWIHQIESFNFG 342
QLIK CEDGNILCL YLIL DPKT+ +LL EIKK++W++QI+SFNF
Sbjct: 320 IGYCLQLIKACEDGNILCLCAGLYLILYDPKTETTELLTDQDFEIKKHMWVYQIDSFNFN 379
BLAST of MS018193 vs. NCBI nr
Match:
XP_004135796.1 (putative F-box protein At1g46984 [Cucumis sativus] >KGN66126.1 hypothetical protein Csa_007182 [Cucumis sativus])
HSP 1 Score: 327.4 bits (838), Expect = 1.5e-85
Identity = 186/369 (50.41%), Postives = 232/369 (62.87%), Query Frame = 0
Query: 1 LIQLIFSKLPFVNLPTCRLVRKAWNNMVLSCKFDPPI----FFFA--HISSFLNLHCVDL 60
++QLIFSKLPF NLPTCRLV WNN++ SCKFDP I FFA + S NLHCV+
Sbjct: 20 VLQLIFSKLPFFNLPTCRLVSTTWNNLISSCKFDPSISISHLFFARFYSSRHPNLHCVEF 79
Query: 61 DPKYLEGMNSVARFNFHPDFYLSFTCISIINSCNGLLCCSFDSIRRCCE----ACILNPM 120
DP++ EGM++VA F FHPD I+IINSC+GL+ + RR C+LNP+
Sbjct: 80 DPQHAEGMSTVASFAFHPDLSSGSCRITIINSCSGLISLIINKRRRRGHRLDLVCVLNPI 139
Query: 121 TNEYFKPPTSSSNHKDI-DYYYGLGFSLRTKHYKLARLSFVHESSFVEIFAFGSTTSPSP 180
TNEYFK PTS S + +Y YGLGFS T YKLAR F H+ V+IFAFG+ S
Sbjct: 140 TNEYFKLPTSRSKGDRVPNYCYGLGFSPTTNQYKLARTHFTHDEFIVDIFAFGT----SC 199
Query: 181 EWTPIEFV-SFCIDDDGVYFNGGLYWVVAY--------DTIVVIIRLDIEDEKLDQISSP 240
EWTP+ V +F + GVY NGGLYWV + D VI RLD++DEK ++IS P
Sbjct: 200 EWTPVGSVPNFLNEYHGVYLNGGLYWVGSQKLPNGGISDYTEVIYRLDLKDEKFEKISFP 259
Query: 241 QLSRDVIAFVVGVSNDILYLTFCIDLEFKYHVWKMEEDFSWAKAFVVAVPKYLHYPFDG- 300
D + V N LYLTFC + +F YH WKMEEDFSW+K FV+A+P+ +H+
Sbjct: 260 LDGGD--DPYIAVYNGTLYLTFCCE-DFDYHAWKMEEDFSWSKEFVLALPENVHHSLRHH 319
Query: 301 -----FQLIKICEDGNILCLVDEFYLILCDPKTKRIKLLMGH--EIKKNLWIHQIESFNF 342
QLIK CEDGNILCL LIL DP T+ +++L EIK+ +W+HQIESF+F
Sbjct: 320 PIGYYLQLIKFCEDGNILCLYAGILLILYDPSTQTVEILTNQDFEIKEAMWVHQIESFSF 379
BLAST of MS018193 vs. NCBI nr
Match:
XP_008450717.1 (PREDICTED: putative F-box protein At3g21120 [Cucumis melo] >TYK10199.1 putative F-box protein [Cucumis melo var. makuwa])
HSP 1 Score: 317.4 bits (812), Expect = 1.5e-82
Identity = 181/371 (48.79%), Postives = 233/371 (62.80%), Query Frame = 0
Query: 1 LIQLIFSKLPFVNLPTCRLVRKAWNNMVLSCKFDPPI----FFFA--HISSFLNLHCVDL 60
++Q IFSK+PF NLPTCRLV + WNN++ SCKFDP FFA + S NLHCV+
Sbjct: 19 ILQQIFSKIPFFNLPTCRLVSRTWNNLISSCKFDPSTSIYHLFFARFYSSRHRNLHCVEF 78
Query: 61 DPKYLEGMNSVARFNFHPDFYLSFTCISIINSCNGLLCCSFDSIRRCCE----ACILNPM 120
DP+++EGM+ VA F FHPDF + + I+IINSC+GL+ RR + C+LNP+
Sbjct: 79 DPQHVEGMSIVASFAFHPDFCSASSRITIINSCSGLISLLITKRRRRGQRRDVVCVLNPI 138
Query: 121 TNEYFKPPT-SSSNHKDIDYYYGLGFSLRTKHYKLARLSFVHESSFVEIFAFGSTTSPSP 180
TNEYFK P K +Y YGLGFS +T YKLAR F H V+IFAFG+ S
Sbjct: 139 TNEYFKHPNLRLKGDKVPNYCYGLGFSPKTNQYKLARTHFAHNEFIVDIFAFGT----SC 198
Query: 181 EWTPIEFV-SFCIDDDGVYFNGGLYWVVAY---------DTIVVIIRLDIEDEKLDQISS 240
EWTPI V +F + GVYFNGGLYWV + D V+ RLD+ DEK +IS
Sbjct: 199 EWTPIGSVPNFLNEYHGVYFNGGLYWVGSQKQLPNGGLSDYTGVVYRLDLNDEKFKKISI 258
Query: 241 PQLSRDVIAFVVGVSNDILYLTFCIDLEFKYHVWKMEEDFSWAKAFVVAVPK------YL 300
P + VGV N LYLT C + +F YHVWKM+EDFSW+K FV+A+P+ +
Sbjct: 259 PFGGDEP---YVGVYNGTLYLTLCCE-DFDYHVWKMKEDFSWSKEFVLALPENILHSLHR 318
Query: 301 HYPFDGF-QLIKICEDGNILCLVDEFYLILCDPKTKRIKLL--MGHEIKKNLWIHQIESF 342
H+P + QL+K CEDG+ILCL LI+ DPKT+++++L EIK+ +W HQIESF
Sbjct: 319 HHPIGYYLQLVKFCEDGSILCLCAGILLIVYDPKTQQMEILTDQDFEIKEGMWFHQIESF 378
BLAST of MS018193 vs. NCBI nr
Match:
XP_038883771.1 (putative F-box protein At1g60370 [Benincasa hispida])
HSP 1 Score: 305.8 bits (782), Expect = 4.6e-79
Identity = 182/369 (49.32%), Postives = 228/369 (61.79%), Query Frame = 0
Query: 1 LIQLIFSKLPFVNLPTCRLVRKAWNNMVLSCKFDPPIFF----FAHISSFLNLHCVDLDP 60
+IQ+I SK+P NLP+CRLV KAWNN+VL+CKFDPP+ A+ NL+C+D +
Sbjct: 22 IIQVILSKVPLFNLPSCRLVCKAWNNLVLTCKFDPPLLISSLSLAYDCPSRNLYCMDFNL 81
Query: 61 KYLEGMNSVARFNFHPDFYLSFTCISIINSCNGLLCCSFDSIRR----CCEACILNPMTN 120
KYLEGM+SV F FHP F+ S ISIINSCNGLL + CILNPMTN
Sbjct: 82 KYLEGMSSVVSFTFHPKFFTS--SISIINSCNGLLSLLISKRKSGSPISYVLCILNPMTN 141
Query: 121 EYFKPPTSSSNHK---DIDYYYGLGFSLRTKHYKLARLSFVHESS--FVEIFAFGSTTSP 180
EYFK P S Y YGLGFS TK YK+AR SF+ + S VEIFAFG+T
Sbjct: 142 EYFKFPAEKSKTHCCCGRPYSYGLGFSPETKQYKIARTSFLRDESTTSVEIFAFGTTR-- 201
Query: 181 SPEWTPIEFV-SFCIDDDGVYFNGGLYWVV----AYDTIVVIIRLDIEDEKLDQISSPQL 240
EWTP+ + S ++D GVYFNGGLYW V D+ I RLDIE+EKL++IS P
Sbjct: 202 --EWTPVGVLPSLVVEDHGVYFNGGLYWTVDELQPRDSNNAIYRLDIENEKLEKISCPHY 261
Query: 241 SRDVIAFVVGVSNDILYL-TFCIDLEFKYHVWKMEEDFSWAKAFVVAVPKYLHYP----- 300
F GV + LYL T+ ++ Y VWKMEE+ SW KAFV++ P+ L +P
Sbjct: 262 GGG--HFFFGVFDGTLYLTTYTGTVDNIYQVWKMEENLSWIKAFVLSRPENLRHPEHDQP 321
Query: 301 --FDGFQLIKICEDGNILCLVDEFYLILCDPKTKRIKLLMGHEI--KKNLWIHQIESFNF 342
Q IK+CEDG ILCL+ F LIL DPKTKR+K+L ++ +++L +HQI+S NF
Sbjct: 322 WGVSQLQPIKVCEDGKILCLLAGFLLILYDPKTKRVKILTNQDVETERHLHVHQIDSSNF 381
BLAST of MS018193 vs. NCBI nr
Match:
XP_004134745.1 (F-box protein At3g07870 [Cucumis sativus] >XP_011658168.1 F-box protein At3g07870 [Cucumis sativus] >XP_031743637.1 F-box protein At3g07870 [Cucumis sativus] >KGN49139.1 hypothetical protein Csa_003023 [Cucumis sativus])
HSP 1 Score: 296.2 bits (757), Expect = 3.6e-76
Identity = 177/366 (48.36%), Postives = 225/366 (61.48%), Query Frame = 0
Query: 1 LIQLIFSKLPFVNLPTCRLVRKAWNNMVLSCKFDPPIFF-FAHISSFLNLHCVDLDPKYL 60
+IQ+I SK+P NL +CRLV K+WNN++L+CKFDP +F FA+ L+CVD DP Y
Sbjct: 22 IIQVILSKVPLFNLTSCRLVCKSWNNLILTCKFDPSLFLSFAYDCPSRTLYCVDFDPMYF 81
Query: 61 EGMNSVARFNFHPDFYLSFTCISIINSCNGLLCCSFDSIRRCCEAC---ILNPMTNEYFK 120
EGMNS+ F FHP F S + ISIIN+CNGLL + + ILNPMTNEYFK
Sbjct: 82 EGMNSIGSFTFHPKFSTSDSSISIINACNGLLSLLISKRKLGSVSYVLGILNPMTNEYFK 141
Query: 121 -PPTSSSNHKDID--YYYGLGFSLRTKHYKLARLSFVHESS--FVEIFAFGSTTSPSPEW 180
P S +H Y YGLGF+ +TK YK+AR SF + S VEIF FGST W
Sbjct: 142 FPAEKSKSHCCCGRLYSYGLGFNPKTKQYKIARTSFRPDESTTLVEIFTFGST---HQVW 201
Query: 181 TPIEFV-SFCIDDDGVYFNGGLYWVVAY-----DTIVVIIRLDIEDEKLDQISSPQLSRD 240
TP+ F+ S ++D GVYF GGLYWV +I I RLD+E+EKL++IS PQ
Sbjct: 202 TPVGFLPSLVVEDHGVYFKGGLYWVANQPDPHDSSISAIYRLDLENEKLEKISCPQYIGG 261
Query: 241 VIAFVVGVSNDILYLTFCIDLEFKYHVWKMEEDFSWAKAFVVAVPKYL------HYPFDG 300
F GV + LYLT + KY VWKM+++FSW KAFV++ P+ L H P+
Sbjct: 262 --HFFFGVFDGTLYLT--VSKNNKYQVWKMKDNFSWIKAFVISRPRNLCHPDHPHQPWGV 321
Query: 301 FQL--IKICEDGNILCLVDEFYLILCDPKTKRIKLLMGHEIK--KNLWIHQIESFNFGSL 342
QL IK CEDG ILCL+ +LIL DPKTK ++L +K K+L +H I++FNF SL
Sbjct: 322 SQLDPIKACEDGKILCLLAGLHLILYDPKTKSAEILTDQSVKVEKHLHVHHIDAFNFNSL 380
BLAST of MS018193 vs. ExPASy TrEMBL
Match:
A0A0A0M1M5 (F-box domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_1G572960 PE=4 SV=1)
HSP 1 Score: 327.4 bits (838), Expect = 7.2e-86
Identity = 186/369 (50.41%), Postives = 232/369 (62.87%), Query Frame = 0
Query: 1 LIQLIFSKLPFVNLPTCRLVRKAWNNMVLSCKFDPPI----FFFA--HISSFLNLHCVDL 60
++QLIFSKLPF NLPTCRLV WNN++ SCKFDP I FFA + S NLHCV+
Sbjct: 20 VLQLIFSKLPFFNLPTCRLVSTTWNNLISSCKFDPSISISHLFFARFYSSRHPNLHCVEF 79
Query: 61 DPKYLEGMNSVARFNFHPDFYLSFTCISIINSCNGLLCCSFDSIRRCCE----ACILNPM 120
DP++ EGM++VA F FHPD I+IINSC+GL+ + RR C+LNP+
Sbjct: 80 DPQHAEGMSTVASFAFHPDLSSGSCRITIINSCSGLISLIINKRRRRGHRLDLVCVLNPI 139
Query: 121 TNEYFKPPTSSSNHKDI-DYYYGLGFSLRTKHYKLARLSFVHESSFVEIFAFGSTTSPSP 180
TNEYFK PTS S + +Y YGLGFS T YKLAR F H+ V+IFAFG+ S
Sbjct: 140 TNEYFKLPTSRSKGDRVPNYCYGLGFSPTTNQYKLARTHFTHDEFIVDIFAFGT----SC 199
Query: 181 EWTPIEFV-SFCIDDDGVYFNGGLYWVVAY--------DTIVVIIRLDIEDEKLDQISSP 240
EWTP+ V +F + GVY NGGLYWV + D VI RLD++DEK ++IS P
Sbjct: 200 EWTPVGSVPNFLNEYHGVYLNGGLYWVGSQKLPNGGISDYTEVIYRLDLKDEKFEKISFP 259
Query: 241 QLSRDVIAFVVGVSNDILYLTFCIDLEFKYHVWKMEEDFSWAKAFVVAVPKYLHYPFDG- 300
D + V N LYLTFC + +F YH WKMEEDFSW+K FV+A+P+ +H+
Sbjct: 260 LDGGD--DPYIAVYNGTLYLTFCCE-DFDYHAWKMEEDFSWSKEFVLALPENVHHSLRHH 319
Query: 301 -----FQLIKICEDGNILCLVDEFYLILCDPKTKRIKLLMGH--EIKKNLWIHQIESFNF 342
QLIK CEDGNILCL LIL DP T+ +++L EIK+ +W+HQIESF+F
Sbjct: 320 PIGYYLQLIKFCEDGNILCLYAGILLILYDPSTQTVEILTNQDFEIKEAMWVHQIESFSF 379
BLAST of MS018193 vs. ExPASy TrEMBL
Match:
A0A5D3CIX9 (Putative F-box protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold16G003440 PE=4 SV=1)
HSP 1 Score: 317.4 bits (812), Expect = 7.4e-83
Identity = 181/371 (48.79%), Postives = 233/371 (62.80%), Query Frame = 0
Query: 1 LIQLIFSKLPFVNLPTCRLVRKAWNNMVLSCKFDPPI----FFFA--HISSFLNLHCVDL 60
++Q IFSK+PF NLPTCRLV + WNN++ SCKFDP FFA + S NLHCV+
Sbjct: 19 ILQQIFSKIPFFNLPTCRLVSRTWNNLISSCKFDPSTSIYHLFFARFYSSRHRNLHCVEF 78
Query: 61 DPKYLEGMNSVARFNFHPDFYLSFTCISIINSCNGLLCCSFDSIRRCCE----ACILNPM 120
DP+++EGM+ VA F FHPDF + + I+IINSC+GL+ RR + C+LNP+
Sbjct: 79 DPQHVEGMSIVASFAFHPDFCSASSRITIINSCSGLISLLITKRRRRGQRRDVVCVLNPI 138
Query: 121 TNEYFKPPT-SSSNHKDIDYYYGLGFSLRTKHYKLARLSFVHESSFVEIFAFGSTTSPSP 180
TNEYFK P K +Y YGLGFS +T YKLAR F H V+IFAFG+ S
Sbjct: 139 TNEYFKHPNLRLKGDKVPNYCYGLGFSPKTNQYKLARTHFAHNEFIVDIFAFGT----SC 198
Query: 181 EWTPIEFV-SFCIDDDGVYFNGGLYWVVAY---------DTIVVIIRLDIEDEKLDQISS 240
EWTPI V +F + GVYFNGGLYWV + D V+ RLD+ DEK +IS
Sbjct: 199 EWTPIGSVPNFLNEYHGVYFNGGLYWVGSQKQLPNGGLSDYTGVVYRLDLNDEKFKKISI 258
Query: 241 PQLSRDVIAFVVGVSNDILYLTFCIDLEFKYHVWKMEEDFSWAKAFVVAVPK------YL 300
P + VGV N LYLT C + +F YHVWKM+EDFSW+K FV+A+P+ +
Sbjct: 259 PFGGDEP---YVGVYNGTLYLTLCCE-DFDYHVWKMKEDFSWSKEFVLALPENILHSLHR 318
Query: 301 HYPFDGF-QLIKICEDGNILCLVDEFYLILCDPKTKRIKLL--MGHEIKKNLWIHQIESF 342
H+P + QL+K CEDG+ILCL LI+ DPKT+++++L EIK+ +W HQIESF
Sbjct: 319 HHPIGYYLQLVKFCEDGSILCLCAGILLIVYDPKTQQMEILTDQDFEIKEGMWFHQIESF 378
BLAST of MS018193 vs. ExPASy TrEMBL
Match:
A0A1S3BQV8 (putative F-box protein At3g21120 OS=Cucumis melo OX=3656 GN=LOC103492215 PE=4 SV=1)
HSP 1 Score: 317.4 bits (812), Expect = 7.4e-83
Identity = 181/371 (48.79%), Postives = 233/371 (62.80%), Query Frame = 0
Query: 1 LIQLIFSKLPFVNLPTCRLVRKAWNNMVLSCKFDPPI----FFFA--HISSFLNLHCVDL 60
++Q IFSK+PF NLPTCRLV + WNN++ SCKFDP FFA + S NLHCV+
Sbjct: 19 ILQQIFSKIPFFNLPTCRLVSRTWNNLISSCKFDPSTSIYHLFFARFYSSRHRNLHCVEF 78
Query: 61 DPKYLEGMNSVARFNFHPDFYLSFTCISIINSCNGLLCCSFDSIRRCCE----ACILNPM 120
DP+++EGM+ VA F FHPDF + + I+IINSC+GL+ RR + C+LNP+
Sbjct: 79 DPQHVEGMSIVASFAFHPDFCSASSRITIINSCSGLISLLITKRRRRGQRRDVVCVLNPI 138
Query: 121 TNEYFKPPT-SSSNHKDIDYYYGLGFSLRTKHYKLARLSFVHESSFVEIFAFGSTTSPSP 180
TNEYFK P K +Y YGLGFS +T YKLAR F H V+IFAFG+ S
Sbjct: 139 TNEYFKHPNLRLKGDKVPNYCYGLGFSPKTNQYKLARTHFAHNEFIVDIFAFGT----SC 198
Query: 181 EWTPIEFV-SFCIDDDGVYFNGGLYWVVAY---------DTIVVIIRLDIEDEKLDQISS 240
EWTPI V +F + GVYFNGGLYWV + D V+ RLD+ DEK +IS
Sbjct: 199 EWTPIGSVPNFLNEYHGVYFNGGLYWVGSQKQLPNGGLSDYTGVVYRLDLNDEKFKKISI 258
Query: 241 PQLSRDVIAFVVGVSNDILYLTFCIDLEFKYHVWKMEEDFSWAKAFVVAVPK------YL 300
P + VGV N LYLT C + +F YHVWKM+EDFSW+K FV+A+P+ +
Sbjct: 259 PFGGDEP---YVGVYNGTLYLTLCCE-DFDYHVWKMKEDFSWSKEFVLALPENILHSLHR 318
Query: 301 HYPFDGF-QLIKICEDGNILCLVDEFYLILCDPKTKRIKLL--MGHEIKKNLWIHQIESF 342
H+P + QL+K CEDG+ILCL LI+ DPKT+++++L EIK+ +W HQIESF
Sbjct: 319 HHPIGYYLQLVKFCEDGSILCLCAGILLIVYDPKTQQMEILTDQDFEIKEGMWFHQIESF 378
BLAST of MS018193 vs. ExPASy TrEMBL
Match:
A0A0A0KJY9 (F-box domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_6G515480 PE=4 SV=1)
HSP 1 Score: 296.2 bits (757), Expect = 1.8e-76
Identity = 177/366 (48.36%), Postives = 225/366 (61.48%), Query Frame = 0
Query: 1 LIQLIFSKLPFVNLPTCRLVRKAWNNMVLSCKFDPPIFF-FAHISSFLNLHCVDLDPKYL 60
+IQ+I SK+P NL +CRLV K+WNN++L+CKFDP +F FA+ L+CVD DP Y
Sbjct: 22 IIQVILSKVPLFNLTSCRLVCKSWNNLILTCKFDPSLFLSFAYDCPSRTLYCVDFDPMYF 81
Query: 61 EGMNSVARFNFHPDFYLSFTCISIINSCNGLLCCSFDSIRRCCEAC---ILNPMTNEYFK 120
EGMNS+ F FHP F S + ISIIN+CNGLL + + ILNPMTNEYFK
Sbjct: 82 EGMNSIGSFTFHPKFSTSDSSISIINACNGLLSLLISKRKLGSVSYVLGILNPMTNEYFK 141
Query: 121 -PPTSSSNHKDID--YYYGLGFSLRTKHYKLARLSFVHESS--FVEIFAFGSTTSPSPEW 180
P S +H Y YGLGF+ +TK YK+AR SF + S VEIF FGST W
Sbjct: 142 FPAEKSKSHCCCGRLYSYGLGFNPKTKQYKIARTSFRPDESTTLVEIFTFGST---HQVW 201
Query: 181 TPIEFV-SFCIDDDGVYFNGGLYWVVAY-----DTIVVIIRLDIEDEKLDQISSPQLSRD 240
TP+ F+ S ++D GVYF GGLYWV +I I RLD+E+EKL++IS PQ
Sbjct: 202 TPVGFLPSLVVEDHGVYFKGGLYWVANQPDPHDSSISAIYRLDLENEKLEKISCPQYIGG 261
Query: 241 VIAFVVGVSNDILYLTFCIDLEFKYHVWKMEEDFSWAKAFVVAVPKYL------HYPFDG 300
F GV + LYLT + KY VWKM+++FSW KAFV++ P+ L H P+
Sbjct: 262 --HFFFGVFDGTLYLT--VSKNNKYQVWKMKDNFSWIKAFVISRPRNLCHPDHPHQPWGV 321
Query: 301 FQL--IKICEDGNILCLVDEFYLILCDPKTKRIKLLMGHEIK--KNLWIHQIESFNFGSL 342
QL IK CEDG ILCL+ +LIL DPKTK ++L +K K+L +H I++FNF SL
Sbjct: 322 SQLDPIKACEDGKILCLLAGLHLILYDPKTKSAEILTDQSVKVEKHLHVHHIDAFNFNSL 380
BLAST of MS018193 vs. ExPASy TrEMBL
Match:
A0A5D3CM94 (Putative F-box protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold255G006720 PE=4 SV=1)
HSP 1 Score: 292.7 bits (748), Expect = 2.0e-75
Identity = 179/366 (48.91%), Postives = 224/366 (61.20%), Query Frame = 0
Query: 1 LIQLIFSKLPFVNLPTCRLVRKAWNNMVLSCKFDPPIFF-FAHISSFLNLHCVDLDPKYL 60
+IQ+I SK+P NL +CRLV K+WNN+VL+CKFDP +F A+ L+CVD DP Y
Sbjct: 22 IIQVILSKVPLFNLTSCRLVCKSWNNLVLTCKFDPSLFISLAYDCPSRTLYCVDFDPMYS 81
Query: 61 EGMNSVARFNFHPDFYLSFTCISIINSCNGLLCCSFDSIRRCCEAC---ILNPMTNEYFK 120
EGMNSV F+FHP F S + ISIIN+CNGLL + + ILNPMTNEYFK
Sbjct: 82 EGMNSVGSFSFHPKFSTSSSSISIINACNGLLSLLISKRKPGSVSYVLGILNPMTNEYFK 141
Query: 121 -PPTSSSNHKDID--YYYGLGFSLRTKHYKLARLSFVHESS--FVEIFAFGSTTSPSPEW 180
P S +H Y YGLGF+ + K YK+AR SF + S VEIFAFGST W
Sbjct: 142 FPAEKSKSHCCCGRLYSYGLGFNPKKKQYKIARTSFRPDESTTLVEIFAFGSTYQ---VW 201
Query: 181 TPIEFV-SFCIDDDGVYFNGGLYWVVAY-----DTIVVIIRLDIEDEKLDQISSPQLSRD 240
T + F+ S ++D GVYFNGGLYWV +I I RLDIE+E L++IS PQ
Sbjct: 202 TSVGFLPSLVVEDHGVYFNGGLYWVANQPDPHDSSISTIYRLDIENENLEKISCPQHLGG 261
Query: 241 VIAFVVGVSNDILYLTFCIDLEFKYHVWKMEEDFSWAKAFVVAVPKYL------HYPFDG 300
F GV + LYLT + KY VWKM+++FSW KAFV++ P+ L H P+
Sbjct: 262 --HFFFGVFDGTLYLT--VSKNNKYQVWKMKDNFSWIKAFVISSPRNLCHPDHPHQPWGV 321
Query: 301 FQL--IKICEDGNILCLVDEFYLILCDPKTKRIKLLMGHEIK--KNLWIHQIESFNFGSL 342
QL IK CEDG ILCL+ +LIL DPKTK ++L +K K+L +H I+SFNF SL
Sbjct: 322 SQLDPIKACEDGKILCLLAGLHLILYDPKTKSAEILTDQSVKVEKHLHVHHIDSFNFNSL 380
The following BLAST results are available for this feature:
Match Name | E-value | Identity | Description | |
XP_038880514.1 | 2.5e-93 | 54.62 | putative F-box protein At1g46984 [Benincasa hispida] | [more] |
XP_004135796.1 | 1.5e-85 | 50.41 | putative F-box protein At1g46984 [Cucumis sativus] >KGN66126.1 hypothetical prot... | [more] |
XP_008450717.1 | 1.5e-82 | 48.79 | PREDICTED: putative F-box protein At3g21120 [Cucumis melo] >TYK10199.1 putative ... | [more] |
XP_038883771.1 | 4.6e-79 | 49.32 | putative F-box protein At1g60370 [Benincasa hispida] | [more] |
XP_004134745.1 | 3.6e-76 | 48.36 | F-box protein At3g07870 [Cucumis sativus] >XP_011658168.1 F-box protein At3g0787... | [more] |
Match Name | E-value | Identity | Description | |
Match Name | E-value | Identity | Description | |
A0A0A0M1M5 | 7.2e-86 | 50.41 | F-box domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_1G572960 PE=4 ... | [more] |
A0A5D3CIX9 | 7.4e-83 | 48.79 | Putative F-box protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold1... | [more] |
A0A1S3BQV8 | 7.4e-83 | 48.79 | putative F-box protein At3g21120 OS=Cucumis melo OX=3656 GN=LOC103492215 PE=4 SV... | [more] |
A0A0A0KJY9 | 1.8e-76 | 48.36 | F-box domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_6G515480 PE=4 ... | [more] |
A0A5D3CM94 | 2.0e-75 | 48.91 | Putative F-box protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold2... | [more] |
Match Name | E-value | Identity | Description | |