MS018193 (gene) Bitter gourd (TR) v1

Overview
NameMS018193
Typegene
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
DescriptionF-box protein At3g07870-like
Locationscaffold56: 436695 .. 437726 (-)
RNA-Seq ExpressionMS018193
SyntenyMS018193
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
CTGATTCAGCTAATATTCTCGAAACTACCATTTGTAAATTTGCCCACTTGTCGGCTCGTCCGTAAAGCATGGAACAATATGGTTTTAAGTTGCAAGTTCGATCCTCCAATCTTCTTTTTTGCCCATATTTCTTCCTTTCTGAATCTTCATTGTGTGGACTTGGATCCTAAATATTTGGAAGGAATGAACAGTGTTGCAAGATTTAACTTCCATCCTGATTTTTATTTGTCCTTCACTTGTATCTCAATCATCAACTCCTGCAATGGACTCCTCTGTTGTTCTTTTGACTCCATAAGAAGATGTTGCGAAGCTTGCATATTAAATCCCATGACAAACGAGTACTTCAAACCTCCCACCTCCAGTTCCAATCATAAGGATATAGATTATTATTACGGATTAGGATTTAGTCTTAGAACAAAGCACTACAAATTGGCAAGACTCTCATTTGTACATGAGAGTAGCTTCGTGGAGATTTTTGCATTTGGTAGTACTACAAGTCCAAGTCCCGAATGGACCCCTATAGAATTTGTGTCTTTTTGCATTGATGACGATGGTGTTTACTTCAATGGAGGCCTGTATTGGGTGGTTGCATATGATACAATTGTCGTCATTATTCGTTTGGATATTGAAGATGAGAAATTGGACCAAATTTCTTCTCCCCAACTTAGCCGAGATGTCATTGCCTTTGTCGTTGGAGTCTCTAATGACATCCTCTATCTAACTTTTTGCATAGACTTAGAATTTAAGTACCATGTGTGGAAGATGGAAGAAGATTTTTCATGGGCTAAAGCATTTGTGGTTGCCGTTCCAAAATATTTGCATTATCCATTTGATGGCTTCCAACTCATCAAAATCTGTGAAGATGGAAACATCCTGTGTCTTGTTGATGAATTCTATTTAATCTTGTGTGACCCAAAGACTAAGAGAATTAAGTTATTGATGGGTCATGAAATTAAGAAAAATTTATGGATTCATCAGATCGAGTCTTTCAATTTTGGTTCTCTTCACAAAATTTTAGTAGGAGCACGGGAT

mRNA sequence

CTGATTCAGCTAATATTCTCGAAACTACCATTTGTAAATTTGCCCACTTGTCGGCTCGTCCGTAAAGCATGGAACAATATGGTTTTAAGTTGCAAGTTCGATCCTCCAATCTTCTTTTTTGCCCATATTTCTTCCTTTCTGAATCTTCATTGTGTGGACTTGGATCCTAAATATTTGGAAGGAATGAACAGTGTTGCAAGATTTAACTTCCATCCTGATTTTTATTTGTCCTTCACTTGTATCTCAATCATCAACTCCTGCAATGGACTCCTCTGTTGTTCTTTTGACTCCATAAGAAGATGTTGCGAAGCTTGCATATTAAATCCCATGACAAACGAGTACTTCAAACCTCCCACCTCCAGTTCCAATCATAAGGATATAGATTATTATTACGGATTAGGATTTAGTCTTAGAACAAAGCACTACAAATTGGCAAGACTCTCATTTGTACATGAGAGTAGCTTCGTGGAGATTTTTGCATTTGGTAGTACTACAAGTCCAAGTCCCGAATGGACCCCTATAGAATTTGTGTCTTTTTGCATTGATGACGATGGTGTTTACTTCAATGGAGGCCTGTATTGGGTGGTTGCATATGATACAATTGTCGTCATTATTCGTTTGGATATTGAAGATGAGAAATTGGACCAAATTTCTTCTCCCCAACTTAGCCGAGATGTCATTGCCTTTGTCGTTGGAGTCTCTAATGACATCCTCTATCTAACTTTTTGCATAGACTTAGAATTTAAGTACCATGTGTGGAAGATGGAAGAAGATTTTTCATGGGCTAAAGCATTTGTGGTTGCCGTTCCAAAATATTTGCATTATCCATTTGATGGCTTCCAACTCATCAAAATCTGTGAAGATGGAAACATCCTGTGTCTTGTTGATGAATTCTATTTAATCTTGTGTGACCCAAAGACTAAGAGAATTAAGTTATTGATGGGTCATGAAATTAAGAAAAATTTATGGATTCATCAGATCGAGTCTTTCAATTTTGGTTCTCTTCACAAAATTTTAGTAGGAGCACGGGAT

Coding sequence (CDS)

CTGATTCAGCTAATATTCTCGAAACTACCATTTGTAAATTTGCCCACTTGTCGGCTCGTCCGTAAAGCATGGAACAATATGGTTTTAAGTTGCAAGTTCGATCCTCCAATCTTCTTTTTTGCCCATATTTCTTCCTTTCTGAATCTTCATTGTGTGGACTTGGATCCTAAATATTTGGAAGGAATGAACAGTGTTGCAAGATTTAACTTCCATCCTGATTTTTATTTGTCCTTCACTTGTATCTCAATCATCAACTCCTGCAATGGACTCCTCTGTTGTTCTTTTGACTCCATAAGAAGATGTTGCGAAGCTTGCATATTAAATCCCATGACAAACGAGTACTTCAAACCTCCCACCTCCAGTTCCAATCATAAGGATATAGATTATTATTACGGATTAGGATTTAGTCTTAGAACAAAGCACTACAAATTGGCAAGACTCTCATTTGTACATGAGAGTAGCTTCGTGGAGATTTTTGCATTTGGTAGTACTACAAGTCCAAGTCCCGAATGGACCCCTATAGAATTTGTGTCTTTTTGCATTGATGACGATGGTGTTTACTTCAATGGAGGCCTGTATTGGGTGGTTGCATATGATACAATTGTCGTCATTATTCGTTTGGATATTGAAGATGAGAAATTGGACCAAATTTCTTCTCCCCAACTTAGCCGAGATGTCATTGCCTTTGTCGTTGGAGTCTCTAATGACATCCTCTATCTAACTTTTTGCATAGACTTAGAATTTAAGTACCATGTGTGGAAGATGGAAGAAGATTTTTCATGGGCTAAAGCATTTGTGGTTGCCGTTCCAAAATATTTGCATTATCCATTTGATGGCTTCCAACTCATCAAAATCTGTGAAGATGGAAACATCCTGTGTCTTGTTGATGAATTCTATTTAATCTTGTGTGACCCAAAGACTAAGAGAATTAAGTTATTGATGGGTCATGAAATTAAGAAAAATTTATGGATTCATCAGATCGAGTCTTTCAATTTTGGTTCTCTTCACAAAATTTTAGTAGGAGCACGGGAT

Protein sequence

LIQLIFSKLPFVNLPTCRLVRKAWNNMVLSCKFDPPIFFFAHISSFLNLHCVDLDPKYLEGMNSVARFNFHPDFYLSFTCISIINSCNGLLCCSFDSIRRCCEACILNPMTNEYFKPPTSSSNHKDIDYYYGLGFSLRTKHYKLARLSFVHESSFVEIFAFGSTTSPSPEWTPIEFVSFCIDDDGVYFNGGLYWVVAYDTIVVIIRLDIEDEKLDQISSPQLSRDVIAFVVGVSNDILYLTFCIDLEFKYHVWKMEEDFSWAKAFVVAVPKYLHYPFDGFQLIKICEDGNILCLVDEFYLILCDPKTKRIKLLMGHEIKKNLWIHQIESFNFGSLHKILVGARD
Homology
BLAST of MS018193 vs. NCBI nr
Match: XP_038880514.1 (putative F-box protein At1g46984 [Benincasa hispida])

HSP 1 Score: 353.2 bits (905), Expect = 2.5e-93
Identity = 201/368 (54.62%), Postives = 238/368 (64.67%), Query Frame = 0

Query: 1   LIQLIFSKLPFVNLPTCRLVRKAWNNMVLSCKFDPPI----FFFAHISSF--LNLHCVDL 60
           ++QLIFSKLPF NLPTCRLV   WNN+VLSCKFDP I     FFAH  S    NLHCVDL
Sbjct: 20  ILQLIFSKLPFFNLPTCRLVSATWNNLVLSCKFDPSISISNLFFAHFYSCRDRNLHCVDL 79

Query: 61  DPKYLEGMNSVARFNFHPDFYLSFTCISIINSCNGLLCCSFDSIRRCCE----ACILNPM 120
           DP++LEGM++VA F FHP+       ISIINSC+GL+       RR        C+LNPM
Sbjct: 80  DPQHLEGMSTVASFTFHPNVSSGSCKISIINSCSGLISLLITKRRRRGHRPGVVCVLNPM 139

Query: 121 TNEYFKPPTSSSNHKDI-DYYYGLGFSLRTKHYKLARLSFVHESSFVEIFAFGSTTSPSP 180
           TNEYFK PT  S    + DY+YGLGFS RTK YKLAR  +V     VEIFAFG+    S 
Sbjct: 140 TNEYFKLPTFRSKGDSVKDYFYGLGFSPRTKQYKLARTHYVCHEFIVEIFAFGT----SC 199

Query: 181 EWTPIEFVSFCIDD-DGVYFNGGLYWVVAYD-----TIVVIIRLDIEDEKLDQISSPQLS 240
           EWTP+  V + +++  GVYFNGGLYWV            VI RLD+ED+K  QIS P   
Sbjct: 200 EWTPVGSVPYFLNEYHGVYFNGGLYWVGGQQLPNAGLSDVIYRLDLEDDKFKQISFPLDG 259

Query: 241 RDVIAF-VVGVSNDILYLTFCIDLEFKYHVWKMEEDFSWAKAFVVAVPKYLHYPFDG--- 300
            D   F  +GV ND LYLT C   +F+YHVWKMEEDFSW K FV+A+P+ +H+       
Sbjct: 260 DDEGDFPYIGVYNDTLYLTLCCG-DFEYHVWKMEEDFSWIKEFVLALPENVHHSLPRHHP 319

Query: 301 ----FQLIKICEDGNILCLVDEFYLILCDPKTKRIKLL--MGHEIKKNLWIHQIESFNFG 342
                QLIK CEDGNILCL    YLIL DPKT+  +LL     EIKK++W++QI+SFNF 
Sbjct: 320 IGYCLQLIKACEDGNILCLCAGLYLILYDPKTETTELLTDQDFEIKKHMWVYQIDSFNFN 379

BLAST of MS018193 vs. NCBI nr
Match: XP_004135796.1 (putative F-box protein At1g46984 [Cucumis sativus] >KGN66126.1 hypothetical protein Csa_007182 [Cucumis sativus])

HSP 1 Score: 327.4 bits (838), Expect = 1.5e-85
Identity = 186/369 (50.41%), Postives = 232/369 (62.87%), Query Frame = 0

Query: 1   LIQLIFSKLPFVNLPTCRLVRKAWNNMVLSCKFDPPI----FFFA--HISSFLNLHCVDL 60
           ++QLIFSKLPF NLPTCRLV   WNN++ SCKFDP I     FFA  + S   NLHCV+ 
Sbjct: 20  VLQLIFSKLPFFNLPTCRLVSTTWNNLISSCKFDPSISISHLFFARFYSSRHPNLHCVEF 79

Query: 61  DPKYLEGMNSVARFNFHPDFYLSFTCISIINSCNGLLCCSFDSIRRCCE----ACILNPM 120
           DP++ EGM++VA F FHPD       I+IINSC+GL+    +  RR        C+LNP+
Sbjct: 80  DPQHAEGMSTVASFAFHPDLSSGSCRITIINSCSGLISLIINKRRRRGHRLDLVCVLNPI 139

Query: 121 TNEYFKPPTSSSNHKDI-DYYYGLGFSLRTKHYKLARLSFVHESSFVEIFAFGSTTSPSP 180
           TNEYFK PTS S    + +Y YGLGFS  T  YKLAR  F H+   V+IFAFG+    S 
Sbjct: 140 TNEYFKLPTSRSKGDRVPNYCYGLGFSPTTNQYKLARTHFTHDEFIVDIFAFGT----SC 199

Query: 181 EWTPIEFV-SFCIDDDGVYFNGGLYWVVAY--------DTIVVIIRLDIEDEKLDQISSP 240
           EWTP+  V +F  +  GVY NGGLYWV +         D   VI RLD++DEK ++IS P
Sbjct: 200 EWTPVGSVPNFLNEYHGVYLNGGLYWVGSQKLPNGGISDYTEVIYRLDLKDEKFEKISFP 259

Query: 241 QLSRDVIAFVVGVSNDILYLTFCIDLEFKYHVWKMEEDFSWAKAFVVAVPKYLHYPFDG- 300
               D     + V N  LYLTFC + +F YH WKMEEDFSW+K FV+A+P+ +H+     
Sbjct: 260 LDGGD--DPYIAVYNGTLYLTFCCE-DFDYHAWKMEEDFSWSKEFVLALPENVHHSLRHH 319

Query: 301 -----FQLIKICEDGNILCLVDEFYLILCDPKTKRIKLLMGH--EIKKNLWIHQIESFNF 342
                 QLIK CEDGNILCL     LIL DP T+ +++L     EIK+ +W+HQIESF+F
Sbjct: 320 PIGYYLQLIKFCEDGNILCLYAGILLILYDPSTQTVEILTNQDFEIKEAMWVHQIESFSF 379

BLAST of MS018193 vs. NCBI nr
Match: XP_008450717.1 (PREDICTED: putative F-box protein At3g21120 [Cucumis melo] >TYK10199.1 putative F-box protein [Cucumis melo var. makuwa])

HSP 1 Score: 317.4 bits (812), Expect = 1.5e-82
Identity = 181/371 (48.79%), Postives = 233/371 (62.80%), Query Frame = 0

Query: 1   LIQLIFSKLPFVNLPTCRLVRKAWNNMVLSCKFDPPI----FFFA--HISSFLNLHCVDL 60
           ++Q IFSK+PF NLPTCRLV + WNN++ SCKFDP       FFA  + S   NLHCV+ 
Sbjct: 19  ILQQIFSKIPFFNLPTCRLVSRTWNNLISSCKFDPSTSIYHLFFARFYSSRHRNLHCVEF 78

Query: 61  DPKYLEGMNSVARFNFHPDFYLSFTCISIINSCNGLLCCSFDSIRRCCE----ACILNPM 120
           DP+++EGM+ VA F FHPDF  + + I+IINSC+GL+       RR  +     C+LNP+
Sbjct: 79  DPQHVEGMSIVASFAFHPDFCSASSRITIINSCSGLISLLITKRRRRGQRRDVVCVLNPI 138

Query: 121 TNEYFKPPT-SSSNHKDIDYYYGLGFSLRTKHYKLARLSFVHESSFVEIFAFGSTTSPSP 180
           TNEYFK P       K  +Y YGLGFS +T  YKLAR  F H    V+IFAFG+    S 
Sbjct: 139 TNEYFKHPNLRLKGDKVPNYCYGLGFSPKTNQYKLARTHFAHNEFIVDIFAFGT----SC 198

Query: 181 EWTPIEFV-SFCIDDDGVYFNGGLYWVVAY---------DTIVVIIRLDIEDEKLDQISS 240
           EWTPI  V +F  +  GVYFNGGLYWV +          D   V+ RLD+ DEK  +IS 
Sbjct: 199 EWTPIGSVPNFLNEYHGVYFNGGLYWVGSQKQLPNGGLSDYTGVVYRLDLNDEKFKKISI 258

Query: 241 PQLSRDVIAFVVGVSNDILYLTFCIDLEFKYHVWKMEEDFSWAKAFVVAVPK------YL 300
           P    +     VGV N  LYLT C + +F YHVWKM+EDFSW+K FV+A+P+      + 
Sbjct: 259 PFGGDEP---YVGVYNGTLYLTLCCE-DFDYHVWKMKEDFSWSKEFVLALPENILHSLHR 318

Query: 301 HYPFDGF-QLIKICEDGNILCLVDEFYLILCDPKTKRIKLL--MGHEIKKNLWIHQIESF 342
           H+P   + QL+K CEDG+ILCL     LI+ DPKT+++++L     EIK+ +W HQIESF
Sbjct: 319 HHPIGYYLQLVKFCEDGSILCLCAGILLIVYDPKTQQMEILTDQDFEIKEGMWFHQIESF 378

BLAST of MS018193 vs. NCBI nr
Match: XP_038883771.1 (putative F-box protein At1g60370 [Benincasa hispida])

HSP 1 Score: 305.8 bits (782), Expect = 4.6e-79
Identity = 182/369 (49.32%), Postives = 228/369 (61.79%), Query Frame = 0

Query: 1   LIQLIFSKLPFVNLPTCRLVRKAWNNMVLSCKFDPPIFF----FAHISSFLNLHCVDLDP 60
           +IQ+I SK+P  NLP+CRLV KAWNN+VL+CKFDPP+       A+     NL+C+D + 
Sbjct: 22  IIQVILSKVPLFNLPSCRLVCKAWNNLVLTCKFDPPLLISSLSLAYDCPSRNLYCMDFNL 81

Query: 61  KYLEGMNSVARFNFHPDFYLSFTCISIINSCNGLLCCSFDSIRR----CCEACILNPMTN 120
           KYLEGM+SV  F FHP F+ S   ISIINSCNGLL       +         CILNPMTN
Sbjct: 82  KYLEGMSSVVSFTFHPKFFTS--SISIINSCNGLLSLLISKRKSGSPISYVLCILNPMTN 141

Query: 121 EYFKPPTSSSNHK---DIDYYYGLGFSLRTKHYKLARLSFVHESS--FVEIFAFGSTTSP 180
           EYFK P   S         Y YGLGFS  TK YK+AR SF+ + S   VEIFAFG+T   
Sbjct: 142 EYFKFPAEKSKTHCCCGRPYSYGLGFSPETKQYKIARTSFLRDESTTSVEIFAFGTTR-- 201

Query: 181 SPEWTPIEFV-SFCIDDDGVYFNGGLYWVV----AYDTIVVIIRLDIEDEKLDQISSPQL 240
             EWTP+  + S  ++D GVYFNGGLYW V      D+   I RLDIE+EKL++IS P  
Sbjct: 202 --EWTPVGVLPSLVVEDHGVYFNGGLYWTVDELQPRDSNNAIYRLDIENEKLEKISCPHY 261

Query: 241 SRDVIAFVVGVSNDILYL-TFCIDLEFKYHVWKMEEDFSWAKAFVVAVPKYLHYP----- 300
                 F  GV +  LYL T+   ++  Y VWKMEE+ SW KAFV++ P+ L +P     
Sbjct: 262 GGG--HFFFGVFDGTLYLTTYTGTVDNIYQVWKMEENLSWIKAFVLSRPENLRHPEHDQP 321

Query: 301 --FDGFQLIKICEDGNILCLVDEFYLILCDPKTKRIKLLMGHEI--KKNLWIHQIESFNF 342
                 Q IK+CEDG ILCL+  F LIL DPKTKR+K+L   ++  +++L +HQI+S NF
Sbjct: 322 WGVSQLQPIKVCEDGKILCLLAGFLLILYDPKTKRVKILTNQDVETERHLHVHQIDSSNF 381

BLAST of MS018193 vs. NCBI nr
Match: XP_004134745.1 (F-box protein At3g07870 [Cucumis sativus] >XP_011658168.1 F-box protein At3g07870 [Cucumis sativus] >XP_031743637.1 F-box protein At3g07870 [Cucumis sativus] >KGN49139.1 hypothetical protein Csa_003023 [Cucumis sativus])

HSP 1 Score: 296.2 bits (757), Expect = 3.6e-76
Identity = 177/366 (48.36%), Postives = 225/366 (61.48%), Query Frame = 0

Query: 1   LIQLIFSKLPFVNLPTCRLVRKAWNNMVLSCKFDPPIFF-FAHISSFLNLHCVDLDPKYL 60
           +IQ+I SK+P  NL +CRLV K+WNN++L+CKFDP +F  FA+      L+CVD DP Y 
Sbjct: 22  IIQVILSKVPLFNLTSCRLVCKSWNNLILTCKFDPSLFLSFAYDCPSRTLYCVDFDPMYF 81

Query: 61  EGMNSVARFNFHPDFYLSFTCISIINSCNGLLCCSFDSIRRCCEAC---ILNPMTNEYFK 120
           EGMNS+  F FHP F  S + ISIIN+CNGLL       +    +    ILNPMTNEYFK
Sbjct: 82  EGMNSIGSFTFHPKFSTSDSSISIINACNGLLSLLISKRKLGSVSYVLGILNPMTNEYFK 141

Query: 121 -PPTSSSNHKDID--YYYGLGFSLRTKHYKLARLSFVHESS--FVEIFAFGSTTSPSPEW 180
            P   S +H      Y YGLGF+ +TK YK+AR SF  + S   VEIF FGST      W
Sbjct: 142 FPAEKSKSHCCCGRLYSYGLGFNPKTKQYKIARTSFRPDESTTLVEIFTFGST---HQVW 201

Query: 181 TPIEFV-SFCIDDDGVYFNGGLYWVVAY-----DTIVVIIRLDIEDEKLDQISSPQLSRD 240
           TP+ F+ S  ++D GVYF GGLYWV         +I  I RLD+E+EKL++IS PQ    
Sbjct: 202 TPVGFLPSLVVEDHGVYFKGGLYWVANQPDPHDSSISAIYRLDLENEKLEKISCPQYIGG 261

Query: 241 VIAFVVGVSNDILYLTFCIDLEFKYHVWKMEEDFSWAKAFVVAVPKYL------HYPFDG 300
              F  GV +  LYLT  +    KY VWKM+++FSW KAFV++ P+ L      H P+  
Sbjct: 262 --HFFFGVFDGTLYLT--VSKNNKYQVWKMKDNFSWIKAFVISRPRNLCHPDHPHQPWGV 321

Query: 301 FQL--IKICEDGNILCLVDEFYLILCDPKTKRIKLLMGHEIK--KNLWIHQIESFNFGSL 342
            QL  IK CEDG ILCL+   +LIL DPKTK  ++L    +K  K+L +H I++FNF SL
Sbjct: 322 SQLDPIKACEDGKILCLLAGLHLILYDPKTKSAEILTDQSVKVEKHLHVHHIDAFNFNSL 380

BLAST of MS018193 vs. ExPASy TrEMBL
Match: A0A0A0M1M5 (F-box domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_1G572960 PE=4 SV=1)

HSP 1 Score: 327.4 bits (838), Expect = 7.2e-86
Identity = 186/369 (50.41%), Postives = 232/369 (62.87%), Query Frame = 0

Query: 1   LIQLIFSKLPFVNLPTCRLVRKAWNNMVLSCKFDPPI----FFFA--HISSFLNLHCVDL 60
           ++QLIFSKLPF NLPTCRLV   WNN++ SCKFDP I     FFA  + S   NLHCV+ 
Sbjct: 20  VLQLIFSKLPFFNLPTCRLVSTTWNNLISSCKFDPSISISHLFFARFYSSRHPNLHCVEF 79

Query: 61  DPKYLEGMNSVARFNFHPDFYLSFTCISIINSCNGLLCCSFDSIRRCCE----ACILNPM 120
           DP++ EGM++VA F FHPD       I+IINSC+GL+    +  RR        C+LNP+
Sbjct: 80  DPQHAEGMSTVASFAFHPDLSSGSCRITIINSCSGLISLIINKRRRRGHRLDLVCVLNPI 139

Query: 121 TNEYFKPPTSSSNHKDI-DYYYGLGFSLRTKHYKLARLSFVHESSFVEIFAFGSTTSPSP 180
           TNEYFK PTS S    + +Y YGLGFS  T  YKLAR  F H+   V+IFAFG+    S 
Sbjct: 140 TNEYFKLPTSRSKGDRVPNYCYGLGFSPTTNQYKLARTHFTHDEFIVDIFAFGT----SC 199

Query: 181 EWTPIEFV-SFCIDDDGVYFNGGLYWVVAY--------DTIVVIIRLDIEDEKLDQISSP 240
           EWTP+  V +F  +  GVY NGGLYWV +         D   VI RLD++DEK ++IS P
Sbjct: 200 EWTPVGSVPNFLNEYHGVYLNGGLYWVGSQKLPNGGISDYTEVIYRLDLKDEKFEKISFP 259

Query: 241 QLSRDVIAFVVGVSNDILYLTFCIDLEFKYHVWKMEEDFSWAKAFVVAVPKYLHYPFDG- 300
               D     + V N  LYLTFC + +F YH WKMEEDFSW+K FV+A+P+ +H+     
Sbjct: 260 LDGGD--DPYIAVYNGTLYLTFCCE-DFDYHAWKMEEDFSWSKEFVLALPENVHHSLRHH 319

Query: 301 -----FQLIKICEDGNILCLVDEFYLILCDPKTKRIKLLMGH--EIKKNLWIHQIESFNF 342
                 QLIK CEDGNILCL     LIL DP T+ +++L     EIK+ +W+HQIESF+F
Sbjct: 320 PIGYYLQLIKFCEDGNILCLYAGILLILYDPSTQTVEILTNQDFEIKEAMWVHQIESFSF 379

BLAST of MS018193 vs. ExPASy TrEMBL
Match: A0A5D3CIX9 (Putative F-box protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold16G003440 PE=4 SV=1)

HSP 1 Score: 317.4 bits (812), Expect = 7.4e-83
Identity = 181/371 (48.79%), Postives = 233/371 (62.80%), Query Frame = 0

Query: 1   LIQLIFSKLPFVNLPTCRLVRKAWNNMVLSCKFDPPI----FFFA--HISSFLNLHCVDL 60
           ++Q IFSK+PF NLPTCRLV + WNN++ SCKFDP       FFA  + S   NLHCV+ 
Sbjct: 19  ILQQIFSKIPFFNLPTCRLVSRTWNNLISSCKFDPSTSIYHLFFARFYSSRHRNLHCVEF 78

Query: 61  DPKYLEGMNSVARFNFHPDFYLSFTCISIINSCNGLLCCSFDSIRRCCE----ACILNPM 120
           DP+++EGM+ VA F FHPDF  + + I+IINSC+GL+       RR  +     C+LNP+
Sbjct: 79  DPQHVEGMSIVASFAFHPDFCSASSRITIINSCSGLISLLITKRRRRGQRRDVVCVLNPI 138

Query: 121 TNEYFKPPT-SSSNHKDIDYYYGLGFSLRTKHYKLARLSFVHESSFVEIFAFGSTTSPSP 180
           TNEYFK P       K  +Y YGLGFS +T  YKLAR  F H    V+IFAFG+    S 
Sbjct: 139 TNEYFKHPNLRLKGDKVPNYCYGLGFSPKTNQYKLARTHFAHNEFIVDIFAFGT----SC 198

Query: 181 EWTPIEFV-SFCIDDDGVYFNGGLYWVVAY---------DTIVVIIRLDIEDEKLDQISS 240
           EWTPI  V +F  +  GVYFNGGLYWV +          D   V+ RLD+ DEK  +IS 
Sbjct: 199 EWTPIGSVPNFLNEYHGVYFNGGLYWVGSQKQLPNGGLSDYTGVVYRLDLNDEKFKKISI 258

Query: 241 PQLSRDVIAFVVGVSNDILYLTFCIDLEFKYHVWKMEEDFSWAKAFVVAVPK------YL 300
           P    +     VGV N  LYLT C + +F YHVWKM+EDFSW+K FV+A+P+      + 
Sbjct: 259 PFGGDEP---YVGVYNGTLYLTLCCE-DFDYHVWKMKEDFSWSKEFVLALPENILHSLHR 318

Query: 301 HYPFDGF-QLIKICEDGNILCLVDEFYLILCDPKTKRIKLL--MGHEIKKNLWIHQIESF 342
           H+P   + QL+K CEDG+ILCL     LI+ DPKT+++++L     EIK+ +W HQIESF
Sbjct: 319 HHPIGYYLQLVKFCEDGSILCLCAGILLIVYDPKTQQMEILTDQDFEIKEGMWFHQIESF 378

BLAST of MS018193 vs. ExPASy TrEMBL
Match: A0A1S3BQV8 (putative F-box protein At3g21120 OS=Cucumis melo OX=3656 GN=LOC103492215 PE=4 SV=1)

HSP 1 Score: 317.4 bits (812), Expect = 7.4e-83
Identity = 181/371 (48.79%), Postives = 233/371 (62.80%), Query Frame = 0

Query: 1   LIQLIFSKLPFVNLPTCRLVRKAWNNMVLSCKFDPPI----FFFA--HISSFLNLHCVDL 60
           ++Q IFSK+PF NLPTCRLV + WNN++ SCKFDP       FFA  + S   NLHCV+ 
Sbjct: 19  ILQQIFSKIPFFNLPTCRLVSRTWNNLISSCKFDPSTSIYHLFFARFYSSRHRNLHCVEF 78

Query: 61  DPKYLEGMNSVARFNFHPDFYLSFTCISIINSCNGLLCCSFDSIRRCCE----ACILNPM 120
           DP+++EGM+ VA F FHPDF  + + I+IINSC+GL+       RR  +     C+LNP+
Sbjct: 79  DPQHVEGMSIVASFAFHPDFCSASSRITIINSCSGLISLLITKRRRRGQRRDVVCVLNPI 138

Query: 121 TNEYFKPPT-SSSNHKDIDYYYGLGFSLRTKHYKLARLSFVHESSFVEIFAFGSTTSPSP 180
           TNEYFK P       K  +Y YGLGFS +T  YKLAR  F H    V+IFAFG+    S 
Sbjct: 139 TNEYFKHPNLRLKGDKVPNYCYGLGFSPKTNQYKLARTHFAHNEFIVDIFAFGT----SC 198

Query: 181 EWTPIEFV-SFCIDDDGVYFNGGLYWVVAY---------DTIVVIIRLDIEDEKLDQISS 240
           EWTPI  V +F  +  GVYFNGGLYWV +          D   V+ RLD+ DEK  +IS 
Sbjct: 199 EWTPIGSVPNFLNEYHGVYFNGGLYWVGSQKQLPNGGLSDYTGVVYRLDLNDEKFKKISI 258

Query: 241 PQLSRDVIAFVVGVSNDILYLTFCIDLEFKYHVWKMEEDFSWAKAFVVAVPK------YL 300
           P    +     VGV N  LYLT C + +F YHVWKM+EDFSW+K FV+A+P+      + 
Sbjct: 259 PFGGDEP---YVGVYNGTLYLTLCCE-DFDYHVWKMKEDFSWSKEFVLALPENILHSLHR 318

Query: 301 HYPFDGF-QLIKICEDGNILCLVDEFYLILCDPKTKRIKLL--MGHEIKKNLWIHQIESF 342
           H+P   + QL+K CEDG+ILCL     LI+ DPKT+++++L     EIK+ +W HQIESF
Sbjct: 319 HHPIGYYLQLVKFCEDGSILCLCAGILLIVYDPKTQQMEILTDQDFEIKEGMWFHQIESF 378

BLAST of MS018193 vs. ExPASy TrEMBL
Match: A0A0A0KJY9 (F-box domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_6G515480 PE=4 SV=1)

HSP 1 Score: 296.2 bits (757), Expect = 1.8e-76
Identity = 177/366 (48.36%), Postives = 225/366 (61.48%), Query Frame = 0

Query: 1   LIQLIFSKLPFVNLPTCRLVRKAWNNMVLSCKFDPPIFF-FAHISSFLNLHCVDLDPKYL 60
           +IQ+I SK+P  NL +CRLV K+WNN++L+CKFDP +F  FA+      L+CVD DP Y 
Sbjct: 22  IIQVILSKVPLFNLTSCRLVCKSWNNLILTCKFDPSLFLSFAYDCPSRTLYCVDFDPMYF 81

Query: 61  EGMNSVARFNFHPDFYLSFTCISIINSCNGLLCCSFDSIRRCCEAC---ILNPMTNEYFK 120
           EGMNS+  F FHP F  S + ISIIN+CNGLL       +    +    ILNPMTNEYFK
Sbjct: 82  EGMNSIGSFTFHPKFSTSDSSISIINACNGLLSLLISKRKLGSVSYVLGILNPMTNEYFK 141

Query: 121 -PPTSSSNHKDID--YYYGLGFSLRTKHYKLARLSFVHESS--FVEIFAFGSTTSPSPEW 180
            P   S +H      Y YGLGF+ +TK YK+AR SF  + S   VEIF FGST      W
Sbjct: 142 FPAEKSKSHCCCGRLYSYGLGFNPKTKQYKIARTSFRPDESTTLVEIFTFGST---HQVW 201

Query: 181 TPIEFV-SFCIDDDGVYFNGGLYWVVAY-----DTIVVIIRLDIEDEKLDQISSPQLSRD 240
           TP+ F+ S  ++D GVYF GGLYWV         +I  I RLD+E+EKL++IS PQ    
Sbjct: 202 TPVGFLPSLVVEDHGVYFKGGLYWVANQPDPHDSSISAIYRLDLENEKLEKISCPQYIGG 261

Query: 241 VIAFVVGVSNDILYLTFCIDLEFKYHVWKMEEDFSWAKAFVVAVPKYL------HYPFDG 300
              F  GV +  LYLT  +    KY VWKM+++FSW KAFV++ P+ L      H P+  
Sbjct: 262 --HFFFGVFDGTLYLT--VSKNNKYQVWKMKDNFSWIKAFVISRPRNLCHPDHPHQPWGV 321

Query: 301 FQL--IKICEDGNILCLVDEFYLILCDPKTKRIKLLMGHEIK--KNLWIHQIESFNFGSL 342
            QL  IK CEDG ILCL+   +LIL DPKTK  ++L    +K  K+L +H I++FNF SL
Sbjct: 322 SQLDPIKACEDGKILCLLAGLHLILYDPKTKSAEILTDQSVKVEKHLHVHHIDAFNFNSL 380

BLAST of MS018193 vs. ExPASy TrEMBL
Match: A0A5D3CM94 (Putative F-box protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold255G006720 PE=4 SV=1)

HSP 1 Score: 292.7 bits (748), Expect = 2.0e-75
Identity = 179/366 (48.91%), Postives = 224/366 (61.20%), Query Frame = 0

Query: 1   LIQLIFSKLPFVNLPTCRLVRKAWNNMVLSCKFDPPIFF-FAHISSFLNLHCVDLDPKYL 60
           +IQ+I SK+P  NL +CRLV K+WNN+VL+CKFDP +F   A+      L+CVD DP Y 
Sbjct: 22  IIQVILSKVPLFNLTSCRLVCKSWNNLVLTCKFDPSLFISLAYDCPSRTLYCVDFDPMYS 81

Query: 61  EGMNSVARFNFHPDFYLSFTCISIINSCNGLLCCSFDSIRRCCEAC---ILNPMTNEYFK 120
           EGMNSV  F+FHP F  S + ISIIN+CNGLL       +    +    ILNPMTNEYFK
Sbjct: 82  EGMNSVGSFSFHPKFSTSSSSISIINACNGLLSLLISKRKPGSVSYVLGILNPMTNEYFK 141

Query: 121 -PPTSSSNHKDID--YYYGLGFSLRTKHYKLARLSFVHESS--FVEIFAFGSTTSPSPEW 180
            P   S +H      Y YGLGF+ + K YK+AR SF  + S   VEIFAFGST      W
Sbjct: 142 FPAEKSKSHCCCGRLYSYGLGFNPKKKQYKIARTSFRPDESTTLVEIFAFGSTYQ---VW 201

Query: 181 TPIEFV-SFCIDDDGVYFNGGLYWVVAY-----DTIVVIIRLDIEDEKLDQISSPQLSRD 240
           T + F+ S  ++D GVYFNGGLYWV         +I  I RLDIE+E L++IS PQ    
Sbjct: 202 TSVGFLPSLVVEDHGVYFNGGLYWVANQPDPHDSSISTIYRLDIENENLEKISCPQHLGG 261

Query: 241 VIAFVVGVSNDILYLTFCIDLEFKYHVWKMEEDFSWAKAFVVAVPKYL------HYPFDG 300
              F  GV +  LYLT  +    KY VWKM+++FSW KAFV++ P+ L      H P+  
Sbjct: 262 --HFFFGVFDGTLYLT--VSKNNKYQVWKMKDNFSWIKAFVISSPRNLCHPDHPHQPWGV 321

Query: 301 FQL--IKICEDGNILCLVDEFYLILCDPKTKRIKLLMGHEIK--KNLWIHQIESFNFGSL 342
            QL  IK CEDG ILCL+   +LIL DPKTK  ++L    +K  K+L +H I+SFNF SL
Sbjct: 322 SQLDPIKACEDGKILCLLAGLHLILYDPKTKSAEILTDQSVKVEKHLHVHHIDSFNFNSL 380

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
XP_038880514.12.5e-9354.62putative F-box protein At1g46984 [Benincasa hispida][more]
XP_004135796.11.5e-8550.41putative F-box protein At1g46984 [Cucumis sativus] >KGN66126.1 hypothetical prot... [more]
XP_008450717.11.5e-8248.79PREDICTED: putative F-box protein At3g21120 [Cucumis melo] >TYK10199.1 putative ... [more]
XP_038883771.14.6e-7949.32putative F-box protein At1g60370 [Benincasa hispida][more]
XP_004134745.13.6e-7648.36F-box protein At3g07870 [Cucumis sativus] >XP_011658168.1 F-box protein At3g0787... [more]
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
A0A0A0M1M57.2e-8650.41F-box domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_1G572960 PE=4 ... [more]
A0A5D3CIX97.4e-8348.79Putative F-box protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold1... [more]
A0A1S3BQV87.4e-8348.79putative F-box protein At3g21120 OS=Cucumis melo OX=3656 GN=LOC103492215 PE=4 SV... [more]
A0A0A0KJY91.8e-7648.36F-box domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_6G515480 PE=4 ... [more]
A0A5D3CM942.0e-7548.91Putative F-box protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold2... [more]
Match NameE-valueIdentityDescription
InterPro
Analysis Name: InterPro Annotations of Bitter gourd (TR) v1
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR017451F-box associated interaction domainTIGRFAMTIGR01640TIGR01640coord: 85..307
e-value: 5.7E-17
score: 59.8
NoneNo IPR availablePANTHERPTHR47993OS09G0372900 PROTEIN-RELATEDcoord: 5..289
NoneNo IPR availablePANTHERPTHR47993:SF20F-BOX FAMILY PROTEINcoord: 5..289

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
MS018193.1MS018193.1mRNA