MS018147 (gene) Bitter gourd (TR) v1

Overview
NameMS018147
Typegene
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
DescriptionPentatricopeptide repeat-containing protein
Locationscaffold166: 88241 .. 89776 (+)
RNA-Seq ExpressionMS018147
SyntenyMS018147
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
CTATCAGTGCTCGAAAAATGCAGTCATCTCAATCACCTCAAGCAAATCCAAGGCTTTCTCATCTCTCTTGGCCACTCTCAGACTCAGTTCTTCGCCTTCAAGCTCGTCCGCTTCTGTAATCTTACTCTTGCTAATTTATCTTACGCTCGCTTCATTTTCGATCAATTGAACTCCCCAAATGTATATCTCTACACTGCAATGATCACTGCTTATGCATCTCAGCCCGATTCTAAAGCCGCGTTTGTTTTGTACCGTGACATGGTCCGCCGAGGAACTCCTCGACCCAACCATTTTATCTACCCCCATGTTCTGAAATCTTGCCCCGAGGTTTTGGAGTCCAATGCCACGCAAATGGTTCATGCCCAGATTCTGAAATCTGGATTTGGTCGATACCCAGTTGTCCAAACGGCCATTGTTGATTCCTACTCGAAGTTCTGTTCGGATATTGGAATTGCACGACAGATGTTCGATGAAATGATTGAGAGAAGTGTGGTGTCTTGGACGGCTATGATTTCTGGGTATGCGAGGCTTGGGAACATTGATGATGCAGTAGCCTTGTTTGAGAGTATGCCTGAGAGGGATGTCCCTGCTTGGAATGCTATTATTGCTGGATTTGCTCAGAATGGATTCTTCTGTGAAGCAATTTGGTTGTTTAGAAGAATGGTGTCCCTGGCAATGGAGGATGATGAGGAGCGTGAAAACAAGCCGAACAAGATCACAGTTGCTTCTGCACTTTCAGCTTGTGGGCATACTGGGATGCTTCATCTTGGTAAGTGGATTCATGGTTATGTTTTCAAAAGTCTTGGTCAGGATTCATTTATCTCAAATGCACTACTTGATATGTATGGGAAATGTGGCAATCTAAAAATAGCGAAAAGGGTTTTTGATATGATTACTTTAAAAAGCTTGACGTCGTGGAATTCATTGATAAACTGTCTTGCACTCCATGGCCATAGTGAAAGTGCAATTGATTTATTTGTAAAGTTGGTTGAATGTGGGGATGGCGTGAAGCCAGATGGGGTTACTTTTGTTGGTGTGTTGAATGCTTGTACTCATGGAGGATTAGTTGAGAAAGGTTACTCATACTTCGAAATGATGAGGCGGGACTATGGCATTGAGCCTCAGATCGAACACTTTGGGTGCTTGATAGACCTTCTTGGCCGTGCAGGACGGTTCGAAGAAGCAATGGAAGTTGTGAGGGGAATGAATATTGAACCAGATGAGGTTGTATGGGGTTCTTTACTAAACGGATGCAAAATCCATGGCCGGTCAGATTTAGCTGAATATTCAGTAAAAAAGTTGATCGAGATGGATCCAGAAAATGGCGGTTATAGAATTATGCTGGCAAATATATATGCGGAGCTCGAAAAGTGGGATGAGGTTCGCAAGGTTCGGAAACTTTTGAAAGAGCAAAATGCTTACAAAACACCAGGCTGCAGTTGGATCGAAGTTGATAATCAGGTCTATCAGTTCTATTCTTTTGACATGACACATCCCAGTGCAGAACAGATATACAAAACCTTGGAAAGTATGATC

mRNA sequence

CTATCAGTGCTCGAAAAATGCAGTCATCTCAATCACCTCAAGCAAATCCAAGGCTTTCTCATCTCTCTTGGCCACTCTCAGACTCAGTTCTTCGCCTTCAAGCTCGTCCGCTTCTGTAATCTTACTCTTGCTAATTTATCTTACGCTCGCTTCATTTTCGATCAATTGAACTCCCCAAATGTATATCTCTACACTGCAATGATCACTGCTTATGCATCTCAGCCCGATTCTAAAGCCGCGTTTGTTTTGTACCGTGACATGGTCCGCCGAGGAACTCCTCGACCCAACCATTTTATCTACCCCCATGTTCTGAAATCTTGCCCCGAGGTTTTGGAGTCCAATGCCACGCAAATGGTTCATGCCCAGATTCTGAAATCTGGATTTGGTCGATACCCAGTTGTCCAAACGGCCATTGTTGATTCCTACTCGAAGTTCTGTTCGGATATTGGAATTGCACGACAGATGTTCGATGAAATGATTGAGAGAAGTGTGGTGTCTTGGACGGCTATGATTTCTGGGTATGCGAGGCTTGGGAACATTGATGATGCAGTAGCCTTGTTTGAGAGTATGCCTGAGAGGGATGTCCCTGCTTGGAATGCTATTATTGCTGGATTTGCTCAGAATGGATTCTTCTGTGAAGCAATTTGGTTGTTTAGAAGAATGGTGTCCCTGGCAATGGAGGATGATGAGGAGCGTGAAAACAAGCCGAACAAGATCACAGTTGCTTCTGCACTTTCAGCTTGTGGGCATACTGGGATGCTTCATCTTGGTAAGTGGATTCATGGTTATGTTTTCAAAAGTCTTGGTCAGGATTCATTTATCTCAAATGCACTACTTGATATGTATGGGAAATGTGGCAATCTAAAAATAGCGAAAAGGGTTTTTGATATGATTACTTTAAAAAGCTTGACGTCGTGGAATTCATTGATAAACTGTCTTGCACTCCATGGCCATAGTGAAAGTGCAATTGATTTATTTGTAAAGTTGGTTGAATGTGGGGATGGCGTGAAGCCAGATGGGGTTACTTTTGTTGGTGTGTTGAATGCTTGTACTCATGGAGGATTAGTTGAGAAAGGTTACTCATACTTCGAAATGATGAGGCGGGACTATGGCATTGAGCCTCAGATCGAACACTTTGGGTGCTTGATAGACCTTCTTGGCCGTGCAGGACGGTTCGAAGAAGCAATGGAAGTTGTGAGGGGAATGAATATTGAACCAGATGAGGTTGTATGGGGTTCTTTACTAAACGGATGCAAAATCCATGGCCGGTCAGATTTAGCTGAATATTCAGTAAAAAAGTTGATCGAGATGGATCCAGAAAATGGCGGTTATAGAATTATGCTGGCAAATATATATGCGGAGCTCGAAAAGTGGGATGAGGTTCGCAAGGTTCGGAAACTTTTGAAAGAGCAAAATGCTTACAAAACACCAGGCTGCAGTTGGATCGAAGTTGATAATCAGGTCTATCAGTTCTATTCTTTTGACATGACACATCCCAGTGCAGAACAGATATACAAAACCTTGGAAAGTATGATC

Coding sequence (CDS)

CTATCAGTGCTCGAAAAATGCAGTCATCTCAATCACCTCAAGCAAATCCAAGGCTTTCTCATCTCTCTTGGCCACTCTCAGACTCAGTTCTTCGCCTTCAAGCTCGTCCGCTTCTGTAATCTTACTCTTGCTAATTTATCTTACGCTCGCTTCATTTTCGATCAATTGAACTCCCCAAATGTATATCTCTACACTGCAATGATCACTGCTTATGCATCTCAGCCCGATTCTAAAGCCGCGTTTGTTTTGTACCGTGACATGGTCCGCCGAGGAACTCCTCGACCCAACCATTTTATCTACCCCCATGTTCTGAAATCTTGCCCCGAGGTTTTGGAGTCCAATGCCACGCAAATGGTTCATGCCCAGATTCTGAAATCTGGATTTGGTCGATACCCAGTTGTCCAAACGGCCATTGTTGATTCCTACTCGAAGTTCTGTTCGGATATTGGAATTGCACGACAGATGTTCGATGAAATGATTGAGAGAAGTGTGGTGTCTTGGACGGCTATGATTTCTGGGTATGCGAGGCTTGGGAACATTGATGATGCAGTAGCCTTGTTTGAGAGTATGCCTGAGAGGGATGTCCCTGCTTGGAATGCTATTATTGCTGGATTTGCTCAGAATGGATTCTTCTGTGAAGCAATTTGGTTGTTTAGAAGAATGGTGTCCCTGGCAATGGAGGATGATGAGGAGCGTGAAAACAAGCCGAACAAGATCACAGTTGCTTCTGCACTTTCAGCTTGTGGGCATACTGGGATGCTTCATCTTGGTAAGTGGATTCATGGTTATGTTTTCAAAAGTCTTGGTCAGGATTCATTTATCTCAAATGCACTACTTGATATGTATGGGAAATGTGGCAATCTAAAAATAGCGAAAAGGGTTTTTGATATGATTACTTTAAAAAGCTTGACGTCGTGGAATTCATTGATAAACTGTCTTGCACTCCATGGCCATAGTGAAAGTGCAATTGATTTATTTGTAAAGTTGGTTGAATGTGGGGATGGCGTGAAGCCAGATGGGGTTACTTTTGTTGGTGTGTTGAATGCTTGTACTCATGGAGGATTAGTTGAGAAAGGTTACTCATACTTCGAAATGATGAGGCGGGACTATGGCATTGAGCCTCAGATCGAACACTTTGGGTGCTTGATAGACCTTCTTGGCCGTGCAGGACGGTTCGAAGAAGCAATGGAAGTTGTGAGGGGAATGAATATTGAACCAGATGAGGTTGTATGGGGTTCTTTACTAAACGGATGCAAAATCCATGGCCGGTCAGATTTAGCTGAATATTCAGTAAAAAAGTTGATCGAGATGGATCCAGAAAATGGCGGTTATAGAATTATGCTGGCAAATATATATGCGGAGCTCGAAAAGTGGGATGAGGTTCGCAAGGTTCGGAAACTTTTGAAAGAGCAAAATGCTTACAAAACACCAGGCTGCAGTTGGATCGAAGTTGATAATCAGGTCTATCAGTTCTATTCTTTTGACATGACACATCCCAGTGCAGAACAGATATACAAAACCTTGGAAAGTATGATC

Protein sequence

LSVLEKCSHLNHLKQIQGFLISLGHSQTQFFAFKLVRFCNLTLANLSYARFIFDQLNSPNVYLYTAMITAYASQPDSKAAFVLYRDMVRRGTPRPNHFIYPHVLKSCPEVLESNATQMVHAQILKSGFGRYPVVQTAIVDSYSKFCSDIGIARQMFDEMIERSVVSWTAMISGYARLGNIDDAVALFESMPERDVPAWNAIIAGFAQNGFFCEAIWLFRRMVSLAMEDDEERENKPNKITVASALSACGHTGMLHLGKWIHGYVFKSLGQDSFISNALLDMYGKCGNLKIAKRVFDMITLKSLTSWNSLINCLALHGHSESAIDLFVKLVECGDGVKPDGVTFVGVLNACTHGGLVEKGYSYFEMMRRDYGIEPQIEHFGCLIDLLGRAGRFEEAMEVVRGMNIEPDEVVWGSLLNGCKIHGRSDLAEYSVKKLIEMDPENGGYRIMLANIYAELEKWDEVRKVRKLLKEQNAYKTPGCSWIEVDNQVYQFYSFDMTHPSAEQIYKTLESMI
Homology
BLAST of MS018147 vs. NCBI nr
Match: XP_022156007.1 (pentatricopeptide repeat-containing protein At1g33350 [Momordica charantia])

HSP 1 Score: 1045.4 bits (2702), Expect = 1.6e-301
Identity = 508/512 (99.22%), Postives = 509/512 (99.41%), Query Frame = 0

Query: 1   LSVLEKCSHLNHLKQIQGFLISLGHSQTQFFAFKLVRFCNLTLANLSYARFIFDQLNSPN 60
           LSVLEKCSHLNHLKQIQGFLISLGHSQTQFFAFKLVRFCNLTLANLSYARFIFDQLNSPN
Sbjct: 15  LSVLEKCSHLNHLKQIQGFLISLGHSQTQFFAFKLVRFCNLTLANLSYARFIFDQLNSPN 74

Query: 61  VYLYTAMITAYASQPDSKAAFVLYRDMVRRGTPRPNHFIYPHVLKSCPEVLESNATQMVH 120
           VYLYTAMITAYASQPDSKAAFVLYRDMVRRGTPRPNHFIYPHVLKSCPEV ESNATQMVH
Sbjct: 75  VYLYTAMITAYASQPDSKAAFVLYRDMVRRGTPRPNHFIYPHVLKSCPEVXESNATQMVH 134

Query: 121 AQILKSGFGRYPVVQTAIVDSYSKFCSDIGIARQMFDEMIERSVVSWTAMISGYARLGNI 180
           AQILKSGFGRYPVVQTAIVDSYSKFCSDIGIARQMFDEMIERSVVSWTAMISGYARLGNI
Sbjct: 135 AQILKSGFGRYPVVQTAIVDSYSKFCSDIGIARQMFDEMIERSVVSWTAMISGYARLGNI 194

Query: 181 DDAVALFESMPERDVPAWNAIIAGFAQNGFFCEAIWLFRRMVSLAMEDDEERENKPNKIT 240
           DDAVALFESMPERDVPAWNAIIAGFAQNGFFCEAIWLFRRMVSLAMEDDEERENKPNKIT
Sbjct: 195 DDAVALFESMPERDVPAWNAIIAGFAQNGFFCEAIWLFRRMVSLAMEDDEERENKPNKIT 254

Query: 241 VASALSACGHTGMLHLGKWIHGYVFKSLGQDSFISNALLDMYGKCGNLKIAKRVFDMITL 300
           VASALSACGHTGMLHLGKWIHGYVFKSL QDSFISNALLDMYGKCGNLKIAKRVFDMITL
Sbjct: 255 VASALSACGHTGMLHLGKWIHGYVFKSLSQDSFISNALLDMYGKCGNLKIAKRVFDMITL 314

Query: 301 KSLTSWNSLINCLALHGHSESAIDLFVKLVECGDGVKPDGVTFVGVLNACTHGGLVEKGY 360
           KSLTSWNSLINCLALHGHSESAIDLFVKLVECGDGVKPDGVTFVGVLNACTHGGLVEKGY
Sbjct: 315 KSLTSWNSLINCLALHGHSESAIDLFVKLVECGDGVKPDGVTFVGVLNACTHGGLVEKGY 374

Query: 361 SYFEMMRRDYGIEPQIEHFGCLIDLLGRAGRFEEAMEVVRGMNIEPDEVVWGSLLNGCKI 420
           SYFEMMR+DYGIEPQIEHFGCLIDLLGRAGRFEEAMEVVRGMNIEPDEVVWGSLLNGCKI
Sbjct: 375 SYFEMMRQDYGIEPQIEHFGCLIDLLGRAGRFEEAMEVVRGMNIEPDEVVWGSLLNGCKI 434

Query: 421 HGRSDLAEYSVKKLIEMDPENGGYRIMLANIYAELEKWDEVRKVRKLLKEQNAYKTPGCS 480
           HGRSDLAEYSVKKLIEMDPENGGYRIMLANIYAELEKWDEVRKVRKLLKEQNAYKTPGCS
Sbjct: 435 HGRSDLAEYSVKKLIEMDPENGGYRIMLANIYAELEKWDEVRKVRKLLKEQNAYKTPGCS 494

Query: 481 WIEVDNQVYQFYSFDMTHPSAEQIYKTLESMI 513
           WIEVDNQVYQFYSFDMTHPSAEQIYKTLES I
Sbjct: 495 WIEVDNQVYQFYSFDMTHPSAEQIYKTLESXI 526

BLAST of MS018147 vs. NCBI nr
Match: XP_038889416.1 (pentatricopeptide repeat-containing protein At1g33350-like [Benincasa hispida])

HSP 1 Score: 974.2 bits (2517), Expect = 4.5e-280
Identity = 467/514 (90.86%), Postives = 493/514 (95.91%), Query Frame = 0

Query: 1   LSVLEKCSHLNHLKQIQGFLISLGHSQTQFFAFKLVRFCNLTLANLSYARFIFDQLNSPN 60
           L+ LEKCS LNHLKQ+QGFLISLGHS+TQFFAFKLVRFCNLTLA+L YARFIFD L SPN
Sbjct: 15  LAALEKCSQLNHLKQLQGFLISLGHSRTQFFAFKLVRFCNLTLADLCYARFIFDHLTSPN 74

Query: 61  VYLYTAMITAYASQPDSKAAFVLYRDMVRRGTPRPNHFIYPHVLKSCPEVLESNATQMVH 120
           VYLYTAMITAYASQPD KAAF+LYR+MVR G PRPNHFIYPHVLKSCPEVLESN T+MVH
Sbjct: 75  VYLYTAMITAYASQPDPKAAFLLYRNMVRHGAPRPNHFIYPHVLKSCPEVLESNGTKMVH 134

Query: 121 AQILKSGFGRYPVVQTAIVDSYSKFCSDIGIARQMFDEMIERSVVSWTAMISGYARLGNI 180
            Q+LKSGFG+YPVVQTAIVDSYS+FCSD+G ARQMFDEM+ERSVVSWTAMISGYARLGN+
Sbjct: 135 TQVLKSGFGQYPVVQTAIVDSYSRFCSDLGNARQMFDEMLERSVVSWTAMISGYARLGNV 194

Query: 181 DDAVALFESMPERDVPAWNAIIAGFAQNGFFCEAIWLFRRMVSLAME-DDEERENKPNKI 240
           D A+ LFESMPERDVPAWNA+IAG AQNGFFCEAIWLF+RMVSLA+E ++ ERENKPNKI
Sbjct: 195 DSAIELFESMPERDVPAWNALIAGCAQNGFFCEAIWLFKRMVSLALEGNNNERENKPNKI 254

Query: 241 TVASALSACGHTGMLHLGKWIHGYVFKS-LGQDSFISNALLDMYGKCGNLKIAKRVFDMI 300
           TVASALSACGHTGMLHLGKWIHGYVFK+  GQDSFISNALLDMYGKCGNLK+A+RVFDMI
Sbjct: 255 TVASALSACGHTGMLHLGKWIHGYVFKNYFGQDSFISNALLDMYGKCGNLKVARRVFDMI 314

Query: 301 TLKSLTSWNSLINCLALHGHSESAIDLFVKLVECGDGVKPDGVTFVGVLNACTHGGLVEK 360
           +LKSLTSWNSLINCLALHGHS SAIDLFV+LV+CGDGVKPDGVTFVGVLNACTHGGLVEK
Sbjct: 315 SLKSLTSWNSLINCLALHGHSGSAIDLFVELVQCGDGVKPDGVTFVGVLNACTHGGLVEK 374

Query: 361 GYSYFEMMRRDYGIEPQIEHFGCLIDLLGRAGRFEEAMEVVRGMNIEPDEVVWGSLLNGC 420
           GYSYFEMMRRDY IEPQIEHFGCLIDLLGRAGRFEEAMEVVRGMNIEPDEVVWGSLLNGC
Sbjct: 375 GYSYFEMMRRDYDIEPQIEHFGCLIDLLGRAGRFEEAMEVVRGMNIEPDEVVWGSLLNGC 434

Query: 421 KIHGRSDLAEYSVKKLIEMDPENGGYRIMLANIYAELEKWDEVRKVRKLLKEQNAYKTPG 480
           KIHGR DLAEYSVKKLIEMDPENGGYRIMLANIYAELEKWDEVRKVRKLLKEQNAYKTPG
Sbjct: 435 KIHGRPDLAEYSVKKLIEMDPENGGYRIMLANIYAELEKWDEVRKVRKLLKEQNAYKTPG 494

Query: 481 CSWIEVDNQVYQFYSFDMTHPSAEQIYKTLESMI 513
           CSWIEVDNQ+YQFYSFDMTHPSAEQIYKTLESMI
Sbjct: 495 CSWIEVDNQIYQFYSFDMTHPSAEQIYKTLESMI 528

BLAST of MS018147 vs. NCBI nr
Match: XP_022974048.1 (pentatricopeptide repeat-containing protein At1g33350 [Cucurbita maxima])

HSP 1 Score: 950.7 bits (2456), Expect = 5.3e-273
Identity = 455/513 (88.69%), Postives = 492/513 (95.91%), Query Frame = 0

Query: 1   LSVLEKCSHLNHLKQIQGFLISLGHSQTQFFAFKLVRFCNLTLANLSYARFIFDQLNSPN 60
           LSVLEKCSHLNHLKQ+QGFLISLGHSQTQF+AFKLVRFCNLTL +L Y+RFIFD L+SPN
Sbjct: 15  LSVLEKCSHLNHLKQLQGFLISLGHSQTQFYAFKLVRFCNLTLTDLCYSRFIFDHLSSPN 74

Query: 61  VYLYTAMITAYASQPDSKAAFVLYRDMVRRGTPRPNHFIYPHVLKSCPEVLESNATQMVH 120
           VYLYTAMITAYAS+PDSKAAF+LYR+MVRRG P PNHFIYPHVLKSCPE+LESN T+MVH
Sbjct: 75  VYLYTAMITAYASEPDSKAAFLLYRNMVRRGAPLPNHFIYPHVLKSCPELLESNGTKMVH 134

Query: 121 AQILKSGFGRYPVVQTAIVDSYSKFCSDIGIARQMFDEMIERSVVSWTAMISGYARLGNI 180
           AQ+LKSGFG YPVVQTAIVD+YS+F +DIGIARQ+FDEM+ERSVVSWTAMISGYARLG+I
Sbjct: 135 AQVLKSGFGGYPVVQTAIVDAYSRFRTDIGIARQVFDEMLERSVVSWTAMISGYARLGDI 194

Query: 181 DDAVALFESMPERDVPAWNAIIAGFAQNGFFCEAIWLFRRMVSLAMEDDEERENKPNKIT 240
           D+A+ALFESMPERD+PAWNA+IAG AQNGFFCEAI LF+RMVSLA+E ++ERE KPNKIT
Sbjct: 195 DNAMALFESMPERDIPAWNALIAGCAQNGFFCEAIGLFKRMVSLALEGNKERETKPNKIT 254

Query: 241 VASALSACGHTGMLHLGKWIHGYVFKS-LGQDSFISNALLDMYGKCGNLKIAKRVFDMIT 300
           VASALS+CGHTGMLHLGKWIHGYVFK+ LGQDSFISNALLDMYGKCGNLK+A+RVFDMIT
Sbjct: 255 VASALSSCGHTGMLHLGKWIHGYVFKTYLGQDSFISNALLDMYGKCGNLKVARRVFDMIT 314

Query: 301 LKSLTSWNSLINCLALHGHSESAIDLFVKLVECGDGVKPDGVTFVGVLNACTHGGLVEKG 360
           LKSLTSWNSLINCLALHGHS SAIDLF++LV+C DGV+PD VTFVGVLNACTHGGLVEKG
Sbjct: 315 LKSLTSWNSLINCLALHGHSGSAIDLFLELVQCRDGVQPDAVTFVGVLNACTHGGLVEKG 374

Query: 361 YSYFEMMRRDYGIEPQIEHFGCLIDLLGRAGRFEEAMEVVRGMNIEPDEVVWGSLLNGCK 420
           YSYF+MMR+DY IEPQIEHFGCLIDLLGRAGRFEEAMEVVRGMNIEPDEVVWGSLLNGCK
Sbjct: 375 YSYFKMMRQDYDIEPQIEHFGCLIDLLGRAGRFEEAMEVVRGMNIEPDEVVWGSLLNGCK 434

Query: 421 IHGRSDLAEYSVKKLIEMDPENGGYRIMLANIYAELEKWDEVRKVRKLLKEQNAYKTPGC 480
           IHGR DLAEYSVKKLIEMDPENGGYRIMLANIYAELE WDEVRKVRKLLKEQNAYK PGC
Sbjct: 435 IHGRLDLAEYSVKKLIEMDPENGGYRIMLANIYAELENWDEVRKVRKLLKEQNAYKIPGC 494

Query: 481 SWIEVDNQVYQFYSFDMTHPSAEQIYKTLESMI 513
           SWIEVDN VYQFYSFDM+HP+AEQIYKTLESMI
Sbjct: 495 SWIEVDNHVYQFYSFDMSHPNAEQIYKTLESMI 527

BLAST of MS018147 vs. NCBI nr
Match: XP_022930176.1 (pentatricopeptide repeat-containing protein At1g33350 [Cucurbita moschata])

HSP 1 Score: 949.1 bits (2452), Expect = 1.5e-272
Identity = 454/513 (88.50%), Postives = 493/513 (96.10%), Query Frame = 0

Query: 1   LSVLEKCSHLNHLKQIQGFLISLGHSQTQFFAFKLVRFCNLTLANLSYARFIFDQLNSPN 60
           LSVLEKCSHLNHLKQ+QGFLISLG SQTQF+AFKLVRFCNLTL +L Y+RFIFD L+SPN
Sbjct: 15  LSVLEKCSHLNHLKQLQGFLISLGQSQTQFYAFKLVRFCNLTLTDLCYSRFIFDHLSSPN 74

Query: 61  VYLYTAMITAYASQPDSKAAFVLYRDMVRRGTPRPNHFIYPHVLKSCPEVLESNATQMVH 120
           VYLYTAMITAYAS+ DSKAAF+LYR+MVRRG P PNHFIYPHVLKSCPE+LESN T+MVH
Sbjct: 75  VYLYTAMITAYASELDSKAAFLLYRNMVRRGDPLPNHFIYPHVLKSCPELLESNGTKMVH 134

Query: 121 AQILKSGFGRYPVVQTAIVDSYSKFCSDIGIARQMFDEMIERSVVSWTAMISGYARLGNI 180
           AQ+LKSGFG YPVVQTAIVD+YS+F ++IGIARQ+FDEM+ERSVVSWTAM+SGYARLG+I
Sbjct: 135 AQVLKSGFGGYPVVQTAIVDAYSRFRTEIGIARQVFDEMLERSVVSWTAMVSGYARLGDI 194

Query: 181 DDAVALFESMPERDVPAWNAIIAGFAQNGFFCEAIWLFRRMVSLAMEDDEERENKPNKIT 240
           D+A+ALFESMPERD+PAWNA+IAG AQNGFFCEAI LF+RMVSLA+E ++ERE KPNKIT
Sbjct: 195 DNAMALFESMPERDIPAWNALIAGCAQNGFFCEAIGLFKRMVSLALEGNKERETKPNKIT 254

Query: 241 VASALSACGHTGMLHLGKWIHGYVFKS-LGQDSFISNALLDMYGKCGNLKIAKRVFDMIT 300
           VASALSACGHTGMLHLGKWIHGYVFK+ LGQDSFISNALLDMYGKCGNLK+A+RVFDMIT
Sbjct: 255 VASALSACGHTGMLHLGKWIHGYVFKTYLGQDSFISNALLDMYGKCGNLKVARRVFDMIT 314

Query: 301 LKSLTSWNSLINCLALHGHSESAIDLFVKLVECGDGVKPDGVTFVGVLNACTHGGLVEKG 360
           LKSLTSWNSLINCLALHGHS SAIDLF++LV+CGDGVKPDGVTFVGVLNACTHGGLVEKG
Sbjct: 315 LKSLTSWNSLINCLALHGHSGSAIDLFLELVQCGDGVKPDGVTFVGVLNACTHGGLVEKG 374

Query: 361 YSYFEMMRRDYGIEPQIEHFGCLIDLLGRAGRFEEAMEVVRGMNIEPDEVVWGSLLNGCK 420
           YSYF+MMR+DY IEPQIEHFGCLIDLLGRAGRFEEAMEVV+GMNIEPDEVVWGSLLNGCK
Sbjct: 375 YSYFKMMRQDYDIEPQIEHFGCLIDLLGRAGRFEEAMEVVKGMNIEPDEVVWGSLLNGCK 434

Query: 421 IHGRSDLAEYSVKKLIEMDPENGGYRIMLANIYAELEKWDEVRKVRKLLKEQNAYKTPGC 480
           IHGR DLAEYSVKKLIEMDPENGGYRIMLANIYAELE WDEVR+VRKLLKEQNAYK PGC
Sbjct: 435 IHGRLDLAEYSVKKLIEMDPENGGYRIMLANIYAELENWDEVRRVRKLLKEQNAYKIPGC 494

Query: 481 SWIEVDNQVYQFYSFDMTHPSAEQIYKTLESMI 513
           SWIEVDNQVYQFYSFDM+HP+AEQIYKTLESMI
Sbjct: 495 SWIEVDNQVYQFYSFDMSHPNAEQIYKTLESMI 527

BLAST of MS018147 vs. NCBI nr
Match: XP_023521314.1 (pentatricopeptide repeat-containing protein At1g33350-like [Cucurbita pepo subsp. pepo] >XP_023536054.1 pentatricopeptide repeat-containing protein At1g33350-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 942.6 bits (2435), Expect = 1.4e-270
Identity = 451/513 (87.91%), Postives = 490/513 (95.52%), Query Frame = 0

Query: 1   LSVLEKCSHLNHLKQIQGFLISLGHSQTQFFAFKLVRFCNLTLANLSYARFIFDQLNSPN 60
           LSVLEKCSHLN LKQ+QGFLISLGHSQTQF+AFKLVRFCNLTL +L Y+RFIFD L+SPN
Sbjct: 15  LSVLEKCSHLNQLKQLQGFLISLGHSQTQFYAFKLVRFCNLTLTDLCYSRFIFDHLSSPN 74

Query: 61  VYLYTAMITAYASQPDSKAAFVLYRDMVRRGTPRPNHFIYPHVLKSCPEVLESNATQMVH 120
           VYLYTAMITAYAS+ DSKAAF+LYR+MVRRG P PNHFIYPHVLKSCPE+LESN T+MVH
Sbjct: 75  VYLYTAMITAYASESDSKAAFLLYRNMVRRGDPLPNHFIYPHVLKSCPELLESNGTKMVH 134

Query: 121 AQILKSGFGRYPVVQTAIVDSYSKFCSDIGIARQMFDEMIERSVVSWTAMISGYARLGNI 180
            Q+LKSGFG YPVVQTAIVD+YS+F +DIGIARQ+FDEM+ERSVVSWTAM+SGYARLG+I
Sbjct: 135 TQVLKSGFGGYPVVQTAIVDAYSRFRTDIGIARQVFDEMLERSVVSWTAMVSGYARLGDI 194

Query: 181 DDAVALFESMPERDVPAWNAIIAGFAQNGFFCEAIWLFRRMVSLAMEDDEERENKPNKIT 240
           D+A+ALFESMPERD+PAWNA+IAG AQNGFF EAI LF+RMVSLA+E ++ERE KPNK+T
Sbjct: 195 DNAMALFESMPERDIPAWNALIAGCAQNGFFSEAIGLFKRMVSLALEGNKERETKPNKVT 254

Query: 241 VASALSACGHTGMLHLGKWIHGYVFKS-LGQDSFISNALLDMYGKCGNLKIAKRVFDMIT 300
           VASALSACGHTGMLHLGKWIHGYVFK+ LGQDSFISNALLDMYGKCGNLK+A+RVFDMIT
Sbjct: 255 VASALSACGHTGMLHLGKWIHGYVFKTYLGQDSFISNALLDMYGKCGNLKVARRVFDMIT 314

Query: 301 LKSLTSWNSLINCLALHGHSESAIDLFVKLVECGDGVKPDGVTFVGVLNACTHGGLVEKG 360
           LKSLTSWNSLINCLALHGHS SAIDLF++LV+C DGVKPDGVTFVGVLNACTHGGLVEKG
Sbjct: 315 LKSLTSWNSLINCLALHGHSGSAIDLFLELVQCEDGVKPDGVTFVGVLNACTHGGLVEKG 374

Query: 361 YSYFEMMRRDYGIEPQIEHFGCLIDLLGRAGRFEEAMEVVRGMNIEPDEVVWGSLLNGCK 420
           YSYF+MMR+DY IEPQIEHFGCLIDLLGRAGRFEEAMEVV+GMNIEPDEVVWGSLLNGCK
Sbjct: 375 YSYFKMMRQDYDIEPQIEHFGCLIDLLGRAGRFEEAMEVVKGMNIEPDEVVWGSLLNGCK 434

Query: 421 IHGRSDLAEYSVKKLIEMDPENGGYRIMLANIYAELEKWDEVRKVRKLLKEQNAYKTPGC 480
           IHGR DLAEYSVKKLIEMDPENGGYRIMLANIYAELE WDEVR+VRKLLKEQNAYK PGC
Sbjct: 435 IHGRLDLAEYSVKKLIEMDPENGGYRIMLANIYAELENWDEVRRVRKLLKEQNAYKIPGC 494

Query: 481 SWIEVDNQVYQFYSFDMTHPSAEQIYKTLESMI 513
           SWIEVDNQVYQFYSFDM+HP+AEQIYKTLESMI
Sbjct: 495 SWIEVDNQVYQFYSFDMSHPNAEQIYKTLESMI 527

BLAST of MS018147 vs. ExPASy Swiss-Prot
Match: Q9C501 (Pentatricopeptide repeat-containing protein At1g33350 OS=Arabidopsis thaliana OX=3702 GN=PCMP-E57 PE=2 SV=1)

HSP 1 Score: 612.8 bits (1579), Expect = 3.4e-174
Identity = 292/515 (56.70%), Postives = 379/515 (73.59%), Query Frame = 0

Query: 2   SVLEKCSHLNHLKQIQGFLISLGHSQTQFFAFKLVRFCNLTLANLSYARFIFDQLNSPNV 61
           +V+ K  HLNHLKQ+Q F+I  G S + F  FKL+RFC L L NLSYARFIFD+ + PN 
Sbjct: 29  AVISKSRHLNHLKQVQSFMIVSGLSHSHFLCFKLLRFCTLRLCNLSYARFIFDRFSFPNT 88

Query: 62  YLYTAMITAYASQ--PDSKAAFVLYRDMVRRGTPRPNHFIYPHVLKSCPEVLESNATQMV 121
           +LY A++TAY+S     + +AF  +R MV R  PRPNHFIYP VLKS P +  + +T +V
Sbjct: 89  HLYAAVLTAYSSSLPLHASSAFSFFRLMVNRSVPRPNHFIYPLVLKSTPYLSSAFSTPLV 148

Query: 122 HAQILKSGFGRYPVVQTAIVDSYSKFCSDIGIARQMFDEMIERSVVSWTAMISGYARLGN 181
           H  + KSGF  Y VVQTA++ SY+   S I +ARQ+FDEM ER+VVSWTAM+SGYAR G+
Sbjct: 149 HTHLFKSGFHLYVVVQTALLHSYASSVSHITLARQLFDEMSERNVVSWTAMLSGYARSGD 208

Query: 182 IDDAVALFESMPERDVPAWNAIIAGFAQNGFFCEAIWLFRRMVSLAMEDDEERENKPNKI 241
           I +AVALFE MPERDVP+WNAI+A   QNG F EA+ LFRRM++       E   +PN++
Sbjct: 209 ISNAVALFEDMPERDVPSWNAILAACTQNGLFLEAVSLFRRMIN-------EPSIRPNEV 268

Query: 242 TVASALSACGHTGMLHLGKWIHGYVF-KSLGQDSFISNALLDMYGKCGNLKIAKRVFDMI 301
           TV   LSAC  TG L L K IH + + + L  D F+SN+L+D+YGKCGNL+ A  VF M 
Sbjct: 269 TVVCVLSACAQTGTLQLAKGIHAFAYRRDLSSDVFVSNSLVDLYGKCGNLEEASSVFKMA 328

Query: 302 TLKSLTSWNSLINCLALHGHSESAIDLFVKLVECG-DGVKPDGVTFVGVLNACTHGGLVE 361
           + KSLT+WNS+INC ALHG SE AI +F ++++   + +KPD +TF+G+LNACTHGGLV 
Sbjct: 329 SKKSLTAWNSMINCFALHGRSEEAIAVFEEMMKLNINDIKPDHITFIGLLNACTHGGLVS 388

Query: 362 KGYSYFEMMRRDYGIEPQIEHFGCLIDLLGRAGRFEEAMEVVRGMNIEPDEVVWGSLLNG 421
           KG  YF++M   +GIEP+IEH+GCLIDLLGRAGRF+EA+EV+  M ++ DE +WGSLLN 
Sbjct: 389 KGRGYFDLMTNRFGIEPRIEHYGCLIDLLGRAGRFDEALEVMSTMKMKADEAIWGSLLNA 448

Query: 422 CKIHGRSDLAEYSVKKLIEMDPENGGYRIMLANIYAELEKWDEVRKVRKLLKEQNAYKTP 481
           CKIHG  DLAE +VK L+ ++P NGGY  M+AN+Y E+  W+E R+ RK++K QNAYK P
Sbjct: 449 CKIHGHLDLAEVAVKNLVALNPNNGGYVAMMANLYGEMGNWEEARRARKMIKHQNAYKPP 508

Query: 482 GCSWIEVDNQVYQFYSFDMTHPSAEQIYKTLESMI 513
           G S IE+DN+V+QFYS D +HP  E+IY  L+S+I
Sbjct: 509 GWSRIEIDNEVHQFYSLDKSHPETEEIYMILDSLI 536

BLAST of MS018147 vs. ExPASy Swiss-Prot
Match: Q9SIL5 (Pentatricopeptide repeat-containing protein At2g20540 OS=Arabidopsis thaliana OX=3702 GN=PCMP-E78 PE=2 SV=1)

HSP 1 Score: 388.7 bits (997), Expect = 1.1e-106
Identity = 195/507 (38.46%), Postives = 315/507 (62.13%), Query Frame = 0

Query: 4   LEKCSHLNHLKQIQGFLISLGHSQTQFFAFKLVRFCNLTLANLSYARFIFDQLNSPNVYL 63
           L++    N  K+I   +I  G SQ+ F   K+V FC+  + ++ YA  +F+Q+++PNV+L
Sbjct: 17  LQRVKSRNEWKKINASIIIHGLSQSSFMVTKMVDFCD-KIEDMDYATRLFNQVSNPNVFL 76

Query: 64  YTAMITAYASQPDSKAAFVLYRDMVRRGTPRPNHFIYPHVLKSCPEVLESNATQMVHAQI 123
           Y ++I AY           +Y+ ++R+    P+ F +P + KSC  +      + VH  +
Sbjct: 77  YNSIIRAYTHNSLYCDVIRIYKQLLRKSFELPDRFTFPFMFKSCASLGSCYLGKQVHGHL 136

Query: 124 LKSGFGRYPVVQTAIVDSYSKFCSDIGIARQMFDEMIERSVVSWTAMISGYARLGNIDDA 183
            K G   + V + A++D Y KF  D+  A ++FDEM ER V+SW +++SGYARLG +  A
Sbjct: 137 CKFGPRFHVVTENALIDMYMKF-DDLVDAHKVFDEMYERDVISWNSLLSGYARLGQMKKA 196

Query: 184 VALFESMPERDVPAWNAIIAGFAQNGFFCEAIWLFRRMVSLAMEDDEERENKPNKITVAS 243
             LF  M ++ + +W A+I+G+   G + EA+  FR M    +E DE        I++ S
Sbjct: 197 KGLFHLMLDKTIVSWTAMISGYTGIGCYVEAMDFFREMQLAGIEPDE--------ISLIS 256

Query: 244 ALSACGHTGMLHLGKWIHGYV-FKSLGQDSFISNALLDMYGKCGNLKIAKRVFDMITLKS 303
            L +C   G L LGKWIH Y   +   + + + NAL++MY KCG +  A ++F  +  K 
Sbjct: 257 VLPSCAQLGSLELGKWIHLYAERRGFLKQTGVCNALIEMYSKCGVISQAIQLFGQMEGKD 316

Query: 304 LTSWNSLINCLALHGHSESAIDLFVKLVECGDGVKPDGVTFVGVLNACTHGGLVEKGYSY 363
           + SW+++I+  A HG++  AI+ F ++      VKP+G+TF+G+L+AC+H G+ ++G  Y
Sbjct: 317 VISWSTMISGYAYHGNAHGAIETFNEMQRA--KVKPNGITFLGLLSACSHVGMWQEGLRY 376

Query: 364 FEMMRRDYGIEPQIEHFGCLIDLLGRAGRFEEAMEVVRGMNIEPDEVVWGSLLNGCKIHG 423
           F+MMR+DY IEP+IEH+GCLID+L RAG+ E A+E+ + M ++PD  +WGSLL+ C+  G
Sbjct: 377 FDMMRQDYQIEPKIEHYGCLIDVLARAGKLERAVEITKTMPMKPDSKIWGSLLSSCRTPG 436

Query: 424 RSDLAEYSVKKLIEMDPENGGYRIMLANIYAELEKWDEVRKVRKLLKEQNAYKTPGCSWI 483
             D+A  ++  L+E++PE+ G  ++LANIYA+L KW++V ++RK+++ +N  KTPG S I
Sbjct: 437 NLDVALVAMDHLVELEPEDMGNYVLLANIYADLGKWEDVSRLRKMIRNENMKKTPGGSLI 496

Query: 484 EVDNQVYQFYSFDMTHPSAEQIYKTLE 510
           EV+N V +F S D + P   +I   L+
Sbjct: 497 EVNNIVQEFVSGDNSKPFWTEISIVLQ 511

BLAST of MS018147 vs. ExPASy Swiss-Prot
Match: Q9FIF7 (Putative pentatricopeptide repeat-containing protein At5g59200, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=PCMP-E41 PE=3 SV=1)

HSP 1 Score: 381.7 bits (979), Expect = 1.3e-104
Identity = 198/513 (38.60%), Postives = 307/513 (59.84%), Query Frame = 0

Query: 1   LSVLEKCSHLNHLKQIQGFLISLGHSQTQFFAFKLVRFCNLTLANLSYARFIFDQLNSPN 60
           +SVL  C ++ H+  I   +I   H Q  F  F+L+R C+ TL ++ YA  +F  +++PN
Sbjct: 33  ISVLRSCKNIAHVPSIHAKIIRTFHDQDAFVVFELIRVCS-TLDSVDYAYDVFSYVSNPN 92

Query: 61  VYLYTAMITAYASQPDSKAAFVLYRDMVRRGTPRPNHFIYPHVLKSCPEVLESNATQMVH 120
           VYLYTAMI  + S   S     LY  M+      P++++   VLK+C    +    + +H
Sbjct: 93  VYLYTAMIDGFVSSGRSADGVSLYHRMIHNSV-LPDNYVITSVLKAC----DLKVCREIH 152

Query: 121 AQILKSGFGRYPVVQTAIVDSYSKFCSDIGIARQMFDEMIERSVVSWTAMISGYARLGNI 180
           AQ+LK GFG    V   +++ Y K   ++  A++MFDEM +R  V+ T MI+ Y+  G I
Sbjct: 153 AQVLKLGFGSSRSVGLKMMEIYGK-SGELVNAKKMFDEMPDRDHVAATVMINCYSECGFI 212

Query: 181 DDAVALFESMPERDVPAWNAIIAGFAQNGFFCEAIWLFRRMVSLAMEDDEEREN-KPNKI 240
            +A+ LF+ +  +D   W A+I G  +N    +A+ LFR M         + EN   N+ 
Sbjct: 213 KEALELFQDVKIKDTVCWTAMIDGLVRNKEMNKALELFREM---------QMENVSANEF 272

Query: 241 TVASALSACGHTGMLHLGKWIHGYV-FKSLGQDSFISNALLDMYGKCGNLKIAKRVFDMI 300
           T    LSAC   G L LG+W+H +V  + +   +F+ NAL++MY +CG++  A+RVF ++
Sbjct: 273 TAVCVLSACSDLGALELGRWVHSFVENQRMELSNFVGNALINMYSRCGDINEARRVFRVM 332

Query: 301 TLKSLTSWNSLINCLALHGHSESAIDLFVKLVECGDGVKPDGVTFVGVLNACTHGGLVEK 360
             K + S+N++I+ LA+HG S  AI+ F  +V    G +P+ VT V +LNAC+HGGL++ 
Sbjct: 333 RDKDVISYNTMISGLAMHGASVEAINEFRDMV--NRGFRPNQVTLVALLNACSHGGLLDI 392

Query: 361 GYSYFEMMRRDYGIEPQIEHFGCLIDLLGRAGRFEEAMEVVRGMNIEPDEVVWGSLLNGC 420
           G   F  M+R + +EPQIEH+GC++DLLGR GR EEA   +  + IEPD ++ G+LL+ C
Sbjct: 393 GLEVFNSMKRVFNVEPQIEHYGCIVDLLGRVGRLEEAYRFIENIPIEPDHIMLGTLLSAC 452

Query: 421 KIHGRSDLAEYSVKKLIEMDPENGGYRIMLANIYAELEKWDEVRKVRKLLKEQNAYKTPG 480
           KIHG  +L E   K+L E +  + G  ++L+N+YA   KW E  ++R+ +++    K PG
Sbjct: 453 KIHGNMELGEKIAKRLFESENPDSGTYVLLSNLYASSGKWKESTEIRESMRDSGIEKEPG 512

Query: 481 CSWIEVDNQVYQFYSFDMTHPSAEQIYKTLESM 512
           CS IEVDNQ+++F   D+ HP  E IY+ L+ +
Sbjct: 513 CSTIEVDNQIHEFLVGDIAHPHKEAIYQRLQEL 527

BLAST of MS018147 vs. ExPASy Swiss-Prot
Match: Q9FNN7 (Pentatricopeptide repeat-containing protein At5g08510 OS=Arabidopsis thaliana OX=3702 GN=PCMP-E20 PE=2 SV=1)

HSP 1 Score: 367.1 bits (941), Expect = 3.3e-100
Identity = 191/505 (37.82%), Postives = 305/505 (60.40%), Query Frame = 0

Query: 10  LNHLKQIQGFLISLGHSQTQFFAFKLVRFCNLTLANLSYARFIFDQLNSPNVYLYTAMIT 69
           +N +KQ+    +  G  +T+    +L     L + NL YAR +FD   +   +LY  +I 
Sbjct: 1   MNGIKQLHAHCLRTGVDETKDLLQRL-----LLIPNLVYARKLFDHHQNSCTFLYNKLIQ 60

Query: 70  AYASQPDSKAAFVLYRDMVRRGTPRPNHFIYPHVLKSCPEVLESNATQMVHAQILKSGFG 129
           AY        + VLY  +   G  RP+H  +  +  +      +   +++H+Q  +SGF 
Sbjct: 61  AYYVHHQPHESIVLYNLLSFDGL-RPSHHTFNFIFAASASFSSARPLRLLHSQFFRSGFE 120

Query: 130 RYPVVQTAIVDSYSKFCSDIGIARQMFDEMIERSVVSWTAMISGYARLGNIDDAVALFES 189
                 T ++ +Y+K    +  AR++FDEM +R V  W AMI+GY R G++  A+ LF+S
Sbjct: 121 SDSFCCTTLITAYAKL-GALCCARRVFDEMSKRDVPVWNAMITGYQRRGDMKAAMELFDS 180

Query: 190 MPERDVPAWNAIIAGFAQNGFFCEAIWLFRRMVSLAMEDDEERENKPNKITVASALSACG 249
           MP ++V +W  +I+GF+QNG + EA+ +F     L ME D  +  KPN ITV S L AC 
Sbjct: 181 MPRKNVTSWTTVISGFSQNGNYSEALKMF-----LCMEKD--KSVKPNHITVVSVLPACA 240

Query: 250 HTGMLHLGKWIHGYVFKSLGQDS-FISNALLDMYGKCGNLKIAKRVFDMI-TLKSLTSWN 309
           + G L +G+ + GY  ++   D+ ++ NA ++MY KCG + +AKR+F+ +   ++L SWN
Sbjct: 241 NLGELEIGRRLEGYARENGFFDNIYVCNATIEMYSKCGMIDVAKRLFEELGNQRNLCSWN 300

Query: 310 SLINCLALHGHSESAIDLFVKLVECGDGVKPDGVTFVGVLNACTHGGLVEKGYSYFEMMR 369
           S+I  LA HG  + A+ LF +++   +G KPD VTFVG+L AC HGG+V KG   F+ M 
Sbjct: 301 SMIGSLATHGKHDEALTLFAQMLR--EGEKPDAVTFVGLLLACVHGGMVVKGQELFKSME 360

Query: 370 RDYGIEPQIEHFGCLIDLLGRAGRFEEAMEVVRGMNIEPDEVVWGSLLNGCKIHGRSDLA 429
             + I P++EH+GC+IDLLGR G+ +EA ++++ M ++PD VVWG+LL  C  HG  ++A
Sbjct: 361 EVHKISPKLEHYGCMIDLLGRVGKLQEAYDLIKTMPMKPDAVVWGTLLGACSFHGNVEIA 420

Query: 430 EYSVKKLIEMDPENGGYRIMLANIYAELEKWDEVRKVRKLLKEQNAYKTPGCSW-IEVDN 489
           E + + L +++P N G  ++++NIYA  EKWD V ++RKL+K++   K  G S+ +EV  
Sbjct: 421 EIASEALFKLEPTNPGNCVIMSNIYAANEKWDGVLRMRKLMKKETMTKAAGYSYFVEVGV 480

Query: 490 QVYQFYSFDMTHPSAEQIYKTLESM 512
            V++F   D +HP + +IY+ LE +
Sbjct: 481 DVHKFTVEDKSHPRSYEIYQVLEEI 489

BLAST of MS018147 vs. ExPASy Swiss-Prot
Match: Q9LN01 (Pentatricopeptide repeat-containing protein At1g08070, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=PCMP-H12 PE=2 SV=1)

HSP 1 Score: 366.3 bits (939), Expect = 5.6e-100
Identity = 203/609 (33.33%), Postives = 313/609 (51.40%), Query Frame = 0

Query: 1   LSVLEKCSHLNHLKQIQGFLISLGHSQTQFFAFKLVRFCNLT--LANLSYARFIFDQLNS 60
           LS+L  C  L  L+ I   +I +G   T +   KL+ FC L+     L YA  +F  +  
Sbjct: 37  LSLLHNCKTLQSLRIIHAQMIKIGLHNTNYALSKLIEFCILSPHFEGLPYAISVFKTIQE 96

Query: 61  PNVYLYTAMITAYASQPDSKAAFVLYRDMVRRGTPRPNHFIYPHVLKSCPEVLESNATQM 120
           PN+ ++  M   +A   D  +A  LY  M+  G   PN + +P VLKSC +       Q 
Sbjct: 97  PNLLIWNTMFRGHALSSDPVSALKLYVCMISLGL-LPNSYTFPFVLKSCAKSKAFKEGQQ 156

Query: 121 VHAQILKSGFGRYPVVQTAIVDSYSKFCSDIGIARQMFDEMIERSVVSWTAMISGYARLG 180
           +H  +LK G      V T+++  Y +    +  A ++FD+   R VVS+TA+I GYA  G
Sbjct: 157 IHGHVLKLGCDLDLYVHTSLISMYVQ-NGRLEDAHKVFDKSPHRDVVSYTALIKGYASRG 216

Query: 181 NIDDAVALFESMPERDVPAWNAIIAGFAQNGFFCEAIWLFRRMVSLAMEDDE-------- 240
            I++A  LF+ +P +DV +WNA+I+G+A+ G + EA+ LF+ M+   +  DE        
Sbjct: 217 YIENAQKLFDEIPVKDVVSWNAMISGYAETGNYKEALELFKDMMKTNVRPDESTMVTVVS 276

Query: 241 ------------------------------------------------------------ 300
                                                                       
Sbjct: 277 ACAQSGSIELGRQVHLWIDDHGFGSNLKIVNALIDLYSKCGELETACGLFERLPYKDVIS 336

Query: 301 -------------------------ERENKPNKITVASALSACGHTGMLHLGKWIHGYV- 360
                                         PN +T+ S L AC H G + +G+WIH Y+ 
Sbjct: 337 WNTLIGGYTHMNLYKEALLLFQEMLRSGETPNDVTMLSILPACAHLGAIDIGRWIHVYID 396

Query: 361 --FKSLGQDSFISNALLDMYGKCGNLKIAKRVFDMITLKSLTSWNSLINCLALHGHSESA 420
              K +   S +  +L+DMY KCG+++ A +VF+ I  KSL+SWN++I   A+HG ++++
Sbjct: 397 KRLKGVTNASSLRTSLIDMYAKCGDIEAAHQVFNSILHKSLSSWNAMIFGFAMHGRADAS 456

Query: 421 IDLFVKLVECGDGVKPDGVTFVGVLNACTHGGLVEKGYSYFEMMRRDYGIEPQIEHFGCL 480
            DLF ++ +   G++PD +TFVG+L+AC+H G+++ G   F  M +DY + P++EH+GC+
Sbjct: 457 FDLFSRMRKI--GIQPDDITFVGLLSACSHSGMLDLGRHIFRTMTQDYKMTPKLEHYGCM 516

Query: 481 IDLLGRAGRFEEAMEVVRGMNIEPDEVVWGSLLNGCKIHGRSDLAEYSVKKLIEMDPENG 512
           IDLLG +G F+EA E++  M +EPD V+W SLL  CK+HG  +L E   + LI+++PEN 
Sbjct: 517 IDLLGHSGLFKEAEEMINMMEMEPDGVIWCSLLKACKMHGNVELGESFAENLIKIEPENP 576

BLAST of MS018147 vs. ExPASy TrEMBL
Match: A0A6J1DQX1 (pentatricopeptide repeat-containing protein At1g33350 OS=Momordica charantia OX=3673 GN=LOC111022983 PE=4 SV=1)

HSP 1 Score: 1045.4 bits (2702), Expect = 7.7e-302
Identity = 508/512 (99.22%), Postives = 509/512 (99.41%), Query Frame = 0

Query: 1   LSVLEKCSHLNHLKQIQGFLISLGHSQTQFFAFKLVRFCNLTLANLSYARFIFDQLNSPN 60
           LSVLEKCSHLNHLKQIQGFLISLGHSQTQFFAFKLVRFCNLTLANLSYARFIFDQLNSPN
Sbjct: 15  LSVLEKCSHLNHLKQIQGFLISLGHSQTQFFAFKLVRFCNLTLANLSYARFIFDQLNSPN 74

Query: 61  VYLYTAMITAYASQPDSKAAFVLYRDMVRRGTPRPNHFIYPHVLKSCPEVLESNATQMVH 120
           VYLYTAMITAYASQPDSKAAFVLYRDMVRRGTPRPNHFIYPHVLKSCPEV ESNATQMVH
Sbjct: 75  VYLYTAMITAYASQPDSKAAFVLYRDMVRRGTPRPNHFIYPHVLKSCPEVXESNATQMVH 134

Query: 121 AQILKSGFGRYPVVQTAIVDSYSKFCSDIGIARQMFDEMIERSVVSWTAMISGYARLGNI 180
           AQILKSGFGRYPVVQTAIVDSYSKFCSDIGIARQMFDEMIERSVVSWTAMISGYARLGNI
Sbjct: 135 AQILKSGFGRYPVVQTAIVDSYSKFCSDIGIARQMFDEMIERSVVSWTAMISGYARLGNI 194

Query: 181 DDAVALFESMPERDVPAWNAIIAGFAQNGFFCEAIWLFRRMVSLAMEDDEERENKPNKIT 240
           DDAVALFESMPERDVPAWNAIIAGFAQNGFFCEAIWLFRRMVSLAMEDDEERENKPNKIT
Sbjct: 195 DDAVALFESMPERDVPAWNAIIAGFAQNGFFCEAIWLFRRMVSLAMEDDEERENKPNKIT 254

Query: 241 VASALSACGHTGMLHLGKWIHGYVFKSLGQDSFISNALLDMYGKCGNLKIAKRVFDMITL 300
           VASALSACGHTGMLHLGKWIHGYVFKSL QDSFISNALLDMYGKCGNLKIAKRVFDMITL
Sbjct: 255 VASALSACGHTGMLHLGKWIHGYVFKSLSQDSFISNALLDMYGKCGNLKIAKRVFDMITL 314

Query: 301 KSLTSWNSLINCLALHGHSESAIDLFVKLVECGDGVKPDGVTFVGVLNACTHGGLVEKGY 360
           KSLTSWNSLINCLALHGHSESAIDLFVKLVECGDGVKPDGVTFVGVLNACTHGGLVEKGY
Sbjct: 315 KSLTSWNSLINCLALHGHSESAIDLFVKLVECGDGVKPDGVTFVGVLNACTHGGLVEKGY 374

Query: 361 SYFEMMRRDYGIEPQIEHFGCLIDLLGRAGRFEEAMEVVRGMNIEPDEVVWGSLLNGCKI 420
           SYFEMMR+DYGIEPQIEHFGCLIDLLGRAGRFEEAMEVVRGMNIEPDEVVWGSLLNGCKI
Sbjct: 375 SYFEMMRQDYGIEPQIEHFGCLIDLLGRAGRFEEAMEVVRGMNIEPDEVVWGSLLNGCKI 434

Query: 421 HGRSDLAEYSVKKLIEMDPENGGYRIMLANIYAELEKWDEVRKVRKLLKEQNAYKTPGCS 480
           HGRSDLAEYSVKKLIEMDPENGGYRIMLANIYAELEKWDEVRKVRKLLKEQNAYKTPGCS
Sbjct: 435 HGRSDLAEYSVKKLIEMDPENGGYRIMLANIYAELEKWDEVRKVRKLLKEQNAYKTPGCS 494

Query: 481 WIEVDNQVYQFYSFDMTHPSAEQIYKTLESMI 513
           WIEVDNQVYQFYSFDMTHPSAEQIYKTLES I
Sbjct: 495 WIEVDNQVYQFYSFDMTHPSAEQIYKTLESXI 526

BLAST of MS018147 vs. ExPASy TrEMBL
Match: A0A6J1IF22 (pentatricopeptide repeat-containing protein At1g33350 OS=Cucurbita maxima OX=3661 GN=LOC111472677 PE=4 SV=1)

HSP 1 Score: 950.7 bits (2456), Expect = 2.6e-273
Identity = 455/513 (88.69%), Postives = 492/513 (95.91%), Query Frame = 0

Query: 1   LSVLEKCSHLNHLKQIQGFLISLGHSQTQFFAFKLVRFCNLTLANLSYARFIFDQLNSPN 60
           LSVLEKCSHLNHLKQ+QGFLISLGHSQTQF+AFKLVRFCNLTL +L Y+RFIFD L+SPN
Sbjct: 15  LSVLEKCSHLNHLKQLQGFLISLGHSQTQFYAFKLVRFCNLTLTDLCYSRFIFDHLSSPN 74

Query: 61  VYLYTAMITAYASQPDSKAAFVLYRDMVRRGTPRPNHFIYPHVLKSCPEVLESNATQMVH 120
           VYLYTAMITAYAS+PDSKAAF+LYR+MVRRG P PNHFIYPHVLKSCPE+LESN T+MVH
Sbjct: 75  VYLYTAMITAYASEPDSKAAFLLYRNMVRRGAPLPNHFIYPHVLKSCPELLESNGTKMVH 134

Query: 121 AQILKSGFGRYPVVQTAIVDSYSKFCSDIGIARQMFDEMIERSVVSWTAMISGYARLGNI 180
           AQ+LKSGFG YPVVQTAIVD+YS+F +DIGIARQ+FDEM+ERSVVSWTAMISGYARLG+I
Sbjct: 135 AQVLKSGFGGYPVVQTAIVDAYSRFRTDIGIARQVFDEMLERSVVSWTAMISGYARLGDI 194

Query: 181 DDAVALFESMPERDVPAWNAIIAGFAQNGFFCEAIWLFRRMVSLAMEDDEERENKPNKIT 240
           D+A+ALFESMPERD+PAWNA+IAG AQNGFFCEAI LF+RMVSLA+E ++ERE KPNKIT
Sbjct: 195 DNAMALFESMPERDIPAWNALIAGCAQNGFFCEAIGLFKRMVSLALEGNKERETKPNKIT 254

Query: 241 VASALSACGHTGMLHLGKWIHGYVFKS-LGQDSFISNALLDMYGKCGNLKIAKRVFDMIT 300
           VASALS+CGHTGMLHLGKWIHGYVFK+ LGQDSFISNALLDMYGKCGNLK+A+RVFDMIT
Sbjct: 255 VASALSSCGHTGMLHLGKWIHGYVFKTYLGQDSFISNALLDMYGKCGNLKVARRVFDMIT 314

Query: 301 LKSLTSWNSLINCLALHGHSESAIDLFVKLVECGDGVKPDGVTFVGVLNACTHGGLVEKG 360
           LKSLTSWNSLINCLALHGHS SAIDLF++LV+C DGV+PD VTFVGVLNACTHGGLVEKG
Sbjct: 315 LKSLTSWNSLINCLALHGHSGSAIDLFLELVQCRDGVQPDAVTFVGVLNACTHGGLVEKG 374

Query: 361 YSYFEMMRRDYGIEPQIEHFGCLIDLLGRAGRFEEAMEVVRGMNIEPDEVVWGSLLNGCK 420
           YSYF+MMR+DY IEPQIEHFGCLIDLLGRAGRFEEAMEVVRGMNIEPDEVVWGSLLNGCK
Sbjct: 375 YSYFKMMRQDYDIEPQIEHFGCLIDLLGRAGRFEEAMEVVRGMNIEPDEVVWGSLLNGCK 434

Query: 421 IHGRSDLAEYSVKKLIEMDPENGGYRIMLANIYAELEKWDEVRKVRKLLKEQNAYKTPGC 480
           IHGR DLAEYSVKKLIEMDPENGGYRIMLANIYAELE WDEVRKVRKLLKEQNAYK PGC
Sbjct: 435 IHGRLDLAEYSVKKLIEMDPENGGYRIMLANIYAELENWDEVRKVRKLLKEQNAYKIPGC 494

Query: 481 SWIEVDNQVYQFYSFDMTHPSAEQIYKTLESMI 513
           SWIEVDN VYQFYSFDM+HP+AEQIYKTLESMI
Sbjct: 495 SWIEVDNHVYQFYSFDMSHPNAEQIYKTLESMI 527

BLAST of MS018147 vs. ExPASy TrEMBL
Match: A0A6J1EQ76 (pentatricopeptide repeat-containing protein At1g33350 OS=Cucurbita moschata OX=3662 GN=LOC111436680 PE=4 SV=1)

HSP 1 Score: 949.1 bits (2452), Expect = 7.5e-273
Identity = 454/513 (88.50%), Postives = 493/513 (96.10%), Query Frame = 0

Query: 1   LSVLEKCSHLNHLKQIQGFLISLGHSQTQFFAFKLVRFCNLTLANLSYARFIFDQLNSPN 60
           LSVLEKCSHLNHLKQ+QGFLISLG SQTQF+AFKLVRFCNLTL +L Y+RFIFD L+SPN
Sbjct: 15  LSVLEKCSHLNHLKQLQGFLISLGQSQTQFYAFKLVRFCNLTLTDLCYSRFIFDHLSSPN 74

Query: 61  VYLYTAMITAYASQPDSKAAFVLYRDMVRRGTPRPNHFIYPHVLKSCPEVLESNATQMVH 120
           VYLYTAMITAYAS+ DSKAAF+LYR+MVRRG P PNHFIYPHVLKSCPE+LESN T+MVH
Sbjct: 75  VYLYTAMITAYASELDSKAAFLLYRNMVRRGDPLPNHFIYPHVLKSCPELLESNGTKMVH 134

Query: 121 AQILKSGFGRYPVVQTAIVDSYSKFCSDIGIARQMFDEMIERSVVSWTAMISGYARLGNI 180
           AQ+LKSGFG YPVVQTAIVD+YS+F ++IGIARQ+FDEM+ERSVVSWTAM+SGYARLG+I
Sbjct: 135 AQVLKSGFGGYPVVQTAIVDAYSRFRTEIGIARQVFDEMLERSVVSWTAMVSGYARLGDI 194

Query: 181 DDAVALFESMPERDVPAWNAIIAGFAQNGFFCEAIWLFRRMVSLAMEDDEERENKPNKIT 240
           D+A+ALFESMPERD+PAWNA+IAG AQNGFFCEAI LF+RMVSLA+E ++ERE KPNKIT
Sbjct: 195 DNAMALFESMPERDIPAWNALIAGCAQNGFFCEAIGLFKRMVSLALEGNKERETKPNKIT 254

Query: 241 VASALSACGHTGMLHLGKWIHGYVFKS-LGQDSFISNALLDMYGKCGNLKIAKRVFDMIT 300
           VASALSACGHTGMLHLGKWIHGYVFK+ LGQDSFISNALLDMYGKCGNLK+A+RVFDMIT
Sbjct: 255 VASALSACGHTGMLHLGKWIHGYVFKTYLGQDSFISNALLDMYGKCGNLKVARRVFDMIT 314

Query: 301 LKSLTSWNSLINCLALHGHSESAIDLFVKLVECGDGVKPDGVTFVGVLNACTHGGLVEKG 360
           LKSLTSWNSLINCLALHGHS SAIDLF++LV+CGDGVKPDGVTFVGVLNACTHGGLVEKG
Sbjct: 315 LKSLTSWNSLINCLALHGHSGSAIDLFLELVQCGDGVKPDGVTFVGVLNACTHGGLVEKG 374

Query: 361 YSYFEMMRRDYGIEPQIEHFGCLIDLLGRAGRFEEAMEVVRGMNIEPDEVVWGSLLNGCK 420
           YSYF+MMR+DY IEPQIEHFGCLIDLLGRAGRFEEAMEVV+GMNIEPDEVVWGSLLNGCK
Sbjct: 375 YSYFKMMRQDYDIEPQIEHFGCLIDLLGRAGRFEEAMEVVKGMNIEPDEVVWGSLLNGCK 434

Query: 421 IHGRSDLAEYSVKKLIEMDPENGGYRIMLANIYAELEKWDEVRKVRKLLKEQNAYKTPGC 480
           IHGR DLAEYSVKKLIEMDPENGGYRIMLANIYAELE WDEVR+VRKLLKEQNAYK PGC
Sbjct: 435 IHGRLDLAEYSVKKLIEMDPENGGYRIMLANIYAELENWDEVRRVRKLLKEQNAYKIPGC 494

Query: 481 SWIEVDNQVYQFYSFDMTHPSAEQIYKTLESMI 513
           SWIEVDNQVYQFYSFDM+HP+AEQIYKTLESMI
Sbjct: 495 SWIEVDNQVYQFYSFDMSHPNAEQIYKTLESMI 527

BLAST of MS018147 vs. ExPASy TrEMBL
Match: A0A1S3CAA7 (pentatricopeptide repeat-containing protein At1g33350 OS=Cucumis melo OX=3656 GN=LOC103498615 PE=4 SV=1)

HSP 1 Score: 935.3 bits (2416), Expect = 1.1e-268
Identity = 451/514 (87.74%), Postives = 482/514 (93.77%), Query Frame = 0

Query: 1   LSVLEKCSHLNHLKQIQGFLISLGHSQTQFFAFKLVRFCNLTLANLSYARFIFDQLNSPN 60
           ++ LEKCS+LNHLKQ+QGFLIS GHSQTQFFAFKLVRFCNLTL +L YAR+IFD L SPN
Sbjct: 40  VAALEKCSNLNHLKQLQGFLISHGHSQTQFFAFKLVRFCNLTLTDLCYARYIFDNLTSPN 99

Query: 61  VYLYTAMITAYASQPDSKAAFVLYRDMVRRGTPRPNHFIYPHVLKSCPEVLESNATQMVH 120
           VYLYTAMITAYA+ PD KAAF+LYR+MVR G  RPNHFIYPHVLKSCP+VL SNAT+MVH
Sbjct: 100 VYLYTAMITAYAAYPDPKAAFLLYRNMVRHGAIRPNHFIYPHVLKSCPDVLGSNATKMVH 159

Query: 121 AQILKSGFGRYPVVQTAIVDSYSKFCSDIGIARQMFDEMIERSVVSWTAMISGYARLGNI 180
            Q+LKSGFGRYPVVQTAIVDSYS+F S IG ARQMFDEM+ERSVVSWTAMISGYARLGN 
Sbjct: 160 TQVLKSGFGRYPVVQTAIVDSYSRFSSVIGNARQMFDEMVERSVVSWTAMISGYARLGNF 219

Query: 181 DDAVALFESMPERDVPAWNAIIAGFAQNGFFCEAIWLFRRMVSLAME-DDEERENKPNKI 240
           D A+ LFESMPERDVPAWNA+IAG AQNGFFCEAIWLF++MVSLA+E ++ +RENKPNK 
Sbjct: 220 DSAIELFESMPERDVPAWNALIAGCAQNGFFCEAIWLFKKMVSLALEGNNNDRENKPNKT 279

Query: 241 TVASALSACGHTGMLHLGKWIHGYVFKSL-GQDSFISNALLDMYGKCGNLKIAKRVFDMI 300
           T+ASALSACG+TGMLHLGKWIHGYVFK+  GQDSFISNALLDMYGKCGNLK+A+RVFDMI
Sbjct: 280 TLASALSACGNTGMLHLGKWIHGYVFKTYPGQDSFISNALLDMYGKCGNLKVARRVFDMI 339

Query: 301 TLKSLTSWNSLINCLALHGHSESAIDLFVKLVECGDGVKPDGVTFVGVLNACTHGGLVEK 360
           TLKSLTSWNSLINCLALHGHS SAIDLF +LV+CGDGVKPD VTFVGVLNACTHGGLVEK
Sbjct: 340 TLKSLTSWNSLINCLALHGHSGSAIDLFAELVQCGDGVKPDEVTFVGVLNACTHGGLVEK 399

Query: 361 GYSYFEMMRRDYGIEPQIEHFGCLIDLLGRAGRFEEAMEVVRGMNIEPDEVVWGSLLNGC 420
           GYSYFEMMRRDY IEPQIEHFGCLIDLLGRAGRFEEAMEVVRGMNIEPDEVVWGSLLN C
Sbjct: 400 GYSYFEMMRRDYDIEPQIEHFGCLIDLLGRAGRFEEAMEVVRGMNIEPDEVVWGSLLNAC 459

Query: 421 KIHGRSDLAEYSVKKLIEMDPENGGYRIMLANIYAELEKWDEVRKVRKLLKEQNAYKTPG 480
           KIHGRSDLAEYSVKKLIEMDP+NGGYRIMLANIYAEL KWDEVRKVRKLLKE+NAYKTPG
Sbjct: 460 KIHGRSDLAEYSVKKLIEMDPKNGGYRIMLANIYAELGKWDEVRKVRKLLKEKNAYKTPG 519

Query: 481 CSWIEVDNQVYQFYSFDMTHPSAEQIYKTLESMI 513
           CSWIEVDNQVYQFYSFDMTHPS EQIYKTLESMI
Sbjct: 520 CSWIEVDNQVYQFYSFDMTHPSVEQIYKTLESMI 553

BLAST of MS018147 vs. ExPASy TrEMBL
Match: A0A5A7T7Y7 (Pentatricopeptide repeat-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold169G001540 PE=4 SV=1)

HSP 1 Score: 887.9 bits (2293), Expect = 2.0e-254
Identity = 430/510 (84.31%), Postives = 467/510 (91.57%), Query Frame = 0

Query: 1   LSVLEKCSHLNHLKQIQGFLISLGHSQTQFFAFKLVRFCNLTLANLSYARFIFDQLNSPN 60
           ++ LEKCS+LNHLKQ+QGFLIS GHSQTQFFAFKLVRFCNLTL +L YAR+IFD L SPN
Sbjct: 15  VAALEKCSNLNHLKQLQGFLISHGHSQTQFFAFKLVRFCNLTLTDLCYARYIFDNLTSPN 74

Query: 61  VYLYTAMITAYASQPDSKAAFVLYRDMVRRGTPRPNHFIYPHVLKSCPEVLESNATQMVH 120
           VYLYTAMITAYA+ PD KAAF+LYR+MVR G  RPNHFIYPHVLKSCP+VL SNAT+MVH
Sbjct: 75  VYLYTAMITAYAAYPDPKAAFLLYRNMVRHGAIRPNHFIYPHVLKSCPDVLGSNATKMVH 134

Query: 121 AQILKSGFGRYPVVQTAIVDSYSKFCSDIGIARQMFDEMIERSVVSWTAMISGYARLGNI 180
            Q+LKSGFGRYPVVQTAIVDSYS+F S IG ARQMFDEM+ERSVVSWTAMISGYARLGN 
Sbjct: 135 TQVLKSGFGRYPVVQTAIVDSYSRFSSVIGNARQMFDEMVERSVVSWTAMISGYARLGNF 194

Query: 181 DDAVALFESMPERDVPAWNAIIAGFAQNGFFCEAIWLFRRMVSLAME-DDEERENKPNKI 240
           D A+ LFESMPERDVPAWNA+IAG AQNGFFCEAIWLF++MVSLA+E ++ +RENKPNK 
Sbjct: 195 DSAIELFESMPERDVPAWNALIAGCAQNGFFCEAIWLFKKMVSLALEGNNNDRENKPNKT 254

Query: 241 TVASALSACGHTGMLHLGKWIHGYVFKSL-GQDSFISNALLDMYGKCGNLKIAKRVFDMI 300
           T+ASALSACG+TGMLHLGKWIHGYVFK+  GQDSFISNALLDMYGKCGNLK+A+RVFDMI
Sbjct: 255 TLASALSACGNTGMLHLGKWIHGYVFKTYPGQDSFISNALLDMYGKCGNLKVARRVFDMI 314

Query: 301 TLKSLTSWNSLINCLALHGHSESAIDLFVKLVECGDGVKPDGVTFVGVLNACTHGGLVEK 360
           TLKSLTSWNSLINCLALHGHS SAIDLF +LV+CGDGVKPD VTFVGVLNACTHGGLVEK
Sbjct: 315 TLKSLTSWNSLINCLALHGHSGSAIDLFAELVQCGDGVKPDEVTFVGVLNACTHGGLVEK 374

Query: 361 GYSYFEMMRRDYGIEPQIEHFGCLIDLLGRAGRFEEAMEVVRGMNIEPDEVVWGSLLNGC 420
           GYSYFEMMRRDY IEPQIEHFGCLIDLLGRAGRFEEAMEVVRGMNIEPDEVVWGSLLN C
Sbjct: 375 GYSYFEMMRRDYDIEPQIEHFGCLIDLLGRAGRFEEAMEVVRGMNIEPDEVVWGSLLNAC 434

Query: 421 KIHGRSDLAEYSVKKLIEMDPENGGYRIMLANIYAELEKWDEVRKVRKLLKEQNAYKTPG 480
           KIHGRSDLAEYSVKKLIEMDP+NGGYRIMLANIYAEL KWDEVRKVRKLLKE+NAYKTPG
Sbjct: 435 KIHGRSDLAEYSVKKLIEMDPKNGGYRIMLANIYAELGKWDEVRKVRKLLKEKNAYKTPG 494

Query: 481 CSWIEVDNQ----VYQFYSFDMTHPSAEQI 505
           CSWIEVDNQ    ++Q  +F   H   +++
Sbjct: 495 CSWIEVDNQENEDLHQIGAFSTFHAIGDRL 524

BLAST of MS018147 vs. TAIR 10
Match: AT1G33350.1 (Pentatricopeptide repeat (PPR) superfamily protein )

HSP 1 Score: 612.8 bits (1579), Expect = 2.4e-175
Identity = 292/515 (56.70%), Postives = 379/515 (73.59%), Query Frame = 0

Query: 2   SVLEKCSHLNHLKQIQGFLISLGHSQTQFFAFKLVRFCNLTLANLSYARFIFDQLNSPNV 61
           +V+ K  HLNHLKQ+Q F+I  G S + F  FKL+RFC L L NLSYARFIFD+ + PN 
Sbjct: 29  AVISKSRHLNHLKQVQSFMIVSGLSHSHFLCFKLLRFCTLRLCNLSYARFIFDRFSFPNT 88

Query: 62  YLYTAMITAYASQ--PDSKAAFVLYRDMVRRGTPRPNHFIYPHVLKSCPEVLESNATQMV 121
           +LY A++TAY+S     + +AF  +R MV R  PRPNHFIYP VLKS P +  + +T +V
Sbjct: 89  HLYAAVLTAYSSSLPLHASSAFSFFRLMVNRSVPRPNHFIYPLVLKSTPYLSSAFSTPLV 148

Query: 122 HAQILKSGFGRYPVVQTAIVDSYSKFCSDIGIARQMFDEMIERSVVSWTAMISGYARLGN 181
           H  + KSGF  Y VVQTA++ SY+   S I +ARQ+FDEM ER+VVSWTAM+SGYAR G+
Sbjct: 149 HTHLFKSGFHLYVVVQTALLHSYASSVSHITLARQLFDEMSERNVVSWTAMLSGYARSGD 208

Query: 182 IDDAVALFESMPERDVPAWNAIIAGFAQNGFFCEAIWLFRRMVSLAMEDDEERENKPNKI 241
           I +AVALFE MPERDVP+WNAI+A   QNG F EA+ LFRRM++       E   +PN++
Sbjct: 209 ISNAVALFEDMPERDVPSWNAILAACTQNGLFLEAVSLFRRMIN-------EPSIRPNEV 268

Query: 242 TVASALSACGHTGMLHLGKWIHGYVF-KSLGQDSFISNALLDMYGKCGNLKIAKRVFDMI 301
           TV   LSAC  TG L L K IH + + + L  D F+SN+L+D+YGKCGNL+ A  VF M 
Sbjct: 269 TVVCVLSACAQTGTLQLAKGIHAFAYRRDLSSDVFVSNSLVDLYGKCGNLEEASSVFKMA 328

Query: 302 TLKSLTSWNSLINCLALHGHSESAIDLFVKLVECG-DGVKPDGVTFVGVLNACTHGGLVE 361
           + KSLT+WNS+INC ALHG SE AI +F ++++   + +KPD +TF+G+LNACTHGGLV 
Sbjct: 329 SKKSLTAWNSMINCFALHGRSEEAIAVFEEMMKLNINDIKPDHITFIGLLNACTHGGLVS 388

Query: 362 KGYSYFEMMRRDYGIEPQIEHFGCLIDLLGRAGRFEEAMEVVRGMNIEPDEVVWGSLLNG 421
           KG  YF++M   +GIEP+IEH+GCLIDLLGRAGRF+EA+EV+  M ++ DE +WGSLLN 
Sbjct: 389 KGRGYFDLMTNRFGIEPRIEHYGCLIDLLGRAGRFDEALEVMSTMKMKADEAIWGSLLNA 448

Query: 422 CKIHGRSDLAEYSVKKLIEMDPENGGYRIMLANIYAELEKWDEVRKVRKLLKEQNAYKTP 481
           CKIHG  DLAE +VK L+ ++P NGGY  M+AN+Y E+  W+E R+ RK++K QNAYK P
Sbjct: 449 CKIHGHLDLAEVAVKNLVALNPNNGGYVAMMANLYGEMGNWEEARRARKMIKHQNAYKPP 508

Query: 482 GCSWIEVDNQVYQFYSFDMTHPSAEQIYKTLESMI 513
           G S IE+DN+V+QFYS D +HP  E+IY  L+S+I
Sbjct: 509 GWSRIEIDNEVHQFYSLDKSHPETEEIYMILDSLI 536

BLAST of MS018147 vs. TAIR 10
Match: AT2G20540.1 (mitochondrial editing factor 21 )

HSP 1 Score: 388.7 bits (997), Expect = 7.5e-108
Identity = 195/507 (38.46%), Postives = 315/507 (62.13%), Query Frame = 0

Query: 4   LEKCSHLNHLKQIQGFLISLGHSQTQFFAFKLVRFCNLTLANLSYARFIFDQLNSPNVYL 63
           L++    N  K+I   +I  G SQ+ F   K+V FC+  + ++ YA  +F+Q+++PNV+L
Sbjct: 17  LQRVKSRNEWKKINASIIIHGLSQSSFMVTKMVDFCD-KIEDMDYATRLFNQVSNPNVFL 76

Query: 64  YTAMITAYASQPDSKAAFVLYRDMVRRGTPRPNHFIYPHVLKSCPEVLESNATQMVHAQI 123
           Y ++I AY           +Y+ ++R+    P+ F +P + KSC  +      + VH  +
Sbjct: 77  YNSIIRAYTHNSLYCDVIRIYKQLLRKSFELPDRFTFPFMFKSCASLGSCYLGKQVHGHL 136

Query: 124 LKSGFGRYPVVQTAIVDSYSKFCSDIGIARQMFDEMIERSVVSWTAMISGYARLGNIDDA 183
            K G   + V + A++D Y KF  D+  A ++FDEM ER V+SW +++SGYARLG +  A
Sbjct: 137 CKFGPRFHVVTENALIDMYMKF-DDLVDAHKVFDEMYERDVISWNSLLSGYARLGQMKKA 196

Query: 184 VALFESMPERDVPAWNAIIAGFAQNGFFCEAIWLFRRMVSLAMEDDEERENKPNKITVAS 243
             LF  M ++ + +W A+I+G+   G + EA+  FR M    +E DE        I++ S
Sbjct: 197 KGLFHLMLDKTIVSWTAMISGYTGIGCYVEAMDFFREMQLAGIEPDE--------ISLIS 256

Query: 244 ALSACGHTGMLHLGKWIHGYV-FKSLGQDSFISNALLDMYGKCGNLKIAKRVFDMITLKS 303
            L +C   G L LGKWIH Y   +   + + + NAL++MY KCG +  A ++F  +  K 
Sbjct: 257 VLPSCAQLGSLELGKWIHLYAERRGFLKQTGVCNALIEMYSKCGVISQAIQLFGQMEGKD 316

Query: 304 LTSWNSLINCLALHGHSESAIDLFVKLVECGDGVKPDGVTFVGVLNACTHGGLVEKGYSY 363
           + SW+++I+  A HG++  AI+ F ++      VKP+G+TF+G+L+AC+H G+ ++G  Y
Sbjct: 317 VISWSTMISGYAYHGNAHGAIETFNEMQRA--KVKPNGITFLGLLSACSHVGMWQEGLRY 376

Query: 364 FEMMRRDYGIEPQIEHFGCLIDLLGRAGRFEEAMEVVRGMNIEPDEVVWGSLLNGCKIHG 423
           F+MMR+DY IEP+IEH+GCLID+L RAG+ E A+E+ + M ++PD  +WGSLL+ C+  G
Sbjct: 377 FDMMRQDYQIEPKIEHYGCLIDVLARAGKLERAVEITKTMPMKPDSKIWGSLLSSCRTPG 436

Query: 424 RSDLAEYSVKKLIEMDPENGGYRIMLANIYAELEKWDEVRKVRKLLKEQNAYKTPGCSWI 483
             D+A  ++  L+E++PE+ G  ++LANIYA+L KW++V ++RK+++ +N  KTPG S I
Sbjct: 437 NLDVALVAMDHLVELEPEDMGNYVLLANIYADLGKWEDVSRLRKMIRNENMKKTPGGSLI 496

Query: 484 EVDNQVYQFYSFDMTHPSAEQIYKTLE 510
           EV+N V +F S D + P   +I   L+
Sbjct: 497 EVNNIVQEFVSGDNSKPFWTEISIVLQ 511

BLAST of MS018147 vs. TAIR 10
Match: AT5G59200.1 (Tetratricopeptide repeat (TPR)-like superfamily protein )

HSP 1 Score: 381.7 bits (979), Expect = 9.1e-106
Identity = 198/513 (38.60%), Postives = 307/513 (59.84%), Query Frame = 0

Query: 1   LSVLEKCSHLNHLKQIQGFLISLGHSQTQFFAFKLVRFCNLTLANLSYARFIFDQLNSPN 60
           +SVL  C ++ H+  I   +I   H Q  F  F+L+R C+ TL ++ YA  +F  +++PN
Sbjct: 33  ISVLRSCKNIAHVPSIHAKIIRTFHDQDAFVVFELIRVCS-TLDSVDYAYDVFSYVSNPN 92

Query: 61  VYLYTAMITAYASQPDSKAAFVLYRDMVRRGTPRPNHFIYPHVLKSCPEVLESNATQMVH 120
           VYLYTAMI  + S   S     LY  M+      P++++   VLK+C    +    + +H
Sbjct: 93  VYLYTAMIDGFVSSGRSADGVSLYHRMIHNSV-LPDNYVITSVLKAC----DLKVCREIH 152

Query: 121 AQILKSGFGRYPVVQTAIVDSYSKFCSDIGIARQMFDEMIERSVVSWTAMISGYARLGNI 180
           AQ+LK GFG    V   +++ Y K   ++  A++MFDEM +R  V+ T MI+ Y+  G I
Sbjct: 153 AQVLKLGFGSSRSVGLKMMEIYGK-SGELVNAKKMFDEMPDRDHVAATVMINCYSECGFI 212

Query: 181 DDAVALFESMPERDVPAWNAIIAGFAQNGFFCEAIWLFRRMVSLAMEDDEEREN-KPNKI 240
            +A+ LF+ +  +D   W A+I G  +N    +A+ LFR M         + EN   N+ 
Sbjct: 213 KEALELFQDVKIKDTVCWTAMIDGLVRNKEMNKALELFREM---------QMENVSANEF 272

Query: 241 TVASALSACGHTGMLHLGKWIHGYV-FKSLGQDSFISNALLDMYGKCGNLKIAKRVFDMI 300
           T    LSAC   G L LG+W+H +V  + +   +F+ NAL++MY +CG++  A+RVF ++
Sbjct: 273 TAVCVLSACSDLGALELGRWVHSFVENQRMELSNFVGNALINMYSRCGDINEARRVFRVM 332

Query: 301 TLKSLTSWNSLINCLALHGHSESAIDLFVKLVECGDGVKPDGVTFVGVLNACTHGGLVEK 360
             K + S+N++I+ LA+HG S  AI+ F  +V    G +P+ VT V +LNAC+HGGL++ 
Sbjct: 333 RDKDVISYNTMISGLAMHGASVEAINEFRDMV--NRGFRPNQVTLVALLNACSHGGLLDI 392

Query: 361 GYSYFEMMRRDYGIEPQIEHFGCLIDLLGRAGRFEEAMEVVRGMNIEPDEVVWGSLLNGC 420
           G   F  M+R + +EPQIEH+GC++DLLGR GR EEA   +  + IEPD ++ G+LL+ C
Sbjct: 393 GLEVFNSMKRVFNVEPQIEHYGCIVDLLGRVGRLEEAYRFIENIPIEPDHIMLGTLLSAC 452

Query: 421 KIHGRSDLAEYSVKKLIEMDPENGGYRIMLANIYAELEKWDEVRKVRKLLKEQNAYKTPG 480
           KIHG  +L E   K+L E +  + G  ++L+N+YA   KW E  ++R+ +++    K PG
Sbjct: 453 KIHGNMELGEKIAKRLFESENPDSGTYVLLSNLYASSGKWKESTEIRESMRDSGIEKEPG 512

Query: 481 CSWIEVDNQVYQFYSFDMTHPSAEQIYKTLESM 512
           CS IEVDNQ+++F   D+ HP  E IY+ L+ +
Sbjct: 513 CSTIEVDNQIHEFLVGDIAHPHKEAIYQRLQEL 527

BLAST of MS018147 vs. TAIR 10
Match: AT5G08510.1 (Pentatricopeptide repeat (PPR) superfamily protein )

HSP 1 Score: 367.1 bits (941), Expect = 2.3e-101
Identity = 191/505 (37.82%), Postives = 305/505 (60.40%), Query Frame = 0

Query: 10  LNHLKQIQGFLISLGHSQTQFFAFKLVRFCNLTLANLSYARFIFDQLNSPNVYLYTAMIT 69
           +N +KQ+    +  G  +T+    +L     L + NL YAR +FD   +   +LY  +I 
Sbjct: 1   MNGIKQLHAHCLRTGVDETKDLLQRL-----LLIPNLVYARKLFDHHQNSCTFLYNKLIQ 60

Query: 70  AYASQPDSKAAFVLYRDMVRRGTPRPNHFIYPHVLKSCPEVLESNATQMVHAQILKSGFG 129
           AY        + VLY  +   G  RP+H  +  +  +      +   +++H+Q  +SGF 
Sbjct: 61  AYYVHHQPHESIVLYNLLSFDGL-RPSHHTFNFIFAASASFSSARPLRLLHSQFFRSGFE 120

Query: 130 RYPVVQTAIVDSYSKFCSDIGIARQMFDEMIERSVVSWTAMISGYARLGNIDDAVALFES 189
                 T ++ +Y+K    +  AR++FDEM +R V  W AMI+GY R G++  A+ LF+S
Sbjct: 121 SDSFCCTTLITAYAKL-GALCCARRVFDEMSKRDVPVWNAMITGYQRRGDMKAAMELFDS 180

Query: 190 MPERDVPAWNAIIAGFAQNGFFCEAIWLFRRMVSLAMEDDEERENKPNKITVASALSACG 249
           MP ++V +W  +I+GF+QNG + EA+ +F     L ME D  +  KPN ITV S L AC 
Sbjct: 181 MPRKNVTSWTTVISGFSQNGNYSEALKMF-----LCMEKD--KSVKPNHITVVSVLPACA 240

Query: 250 HTGMLHLGKWIHGYVFKSLGQDS-FISNALLDMYGKCGNLKIAKRVFDMI-TLKSLTSWN 309
           + G L +G+ + GY  ++   D+ ++ NA ++MY KCG + +AKR+F+ +   ++L SWN
Sbjct: 241 NLGELEIGRRLEGYARENGFFDNIYVCNATIEMYSKCGMIDVAKRLFEELGNQRNLCSWN 300

Query: 310 SLINCLALHGHSESAIDLFVKLVECGDGVKPDGVTFVGVLNACTHGGLVEKGYSYFEMMR 369
           S+I  LA HG  + A+ LF +++   +G KPD VTFVG+L AC HGG+V KG   F+ M 
Sbjct: 301 SMIGSLATHGKHDEALTLFAQMLR--EGEKPDAVTFVGLLLACVHGGMVVKGQELFKSME 360

Query: 370 RDYGIEPQIEHFGCLIDLLGRAGRFEEAMEVVRGMNIEPDEVVWGSLLNGCKIHGRSDLA 429
             + I P++EH+GC+IDLLGR G+ +EA ++++ M ++PD VVWG+LL  C  HG  ++A
Sbjct: 361 EVHKISPKLEHYGCMIDLLGRVGKLQEAYDLIKTMPMKPDAVVWGTLLGACSFHGNVEIA 420

Query: 430 EYSVKKLIEMDPENGGYRIMLANIYAELEKWDEVRKVRKLLKEQNAYKTPGCSW-IEVDN 489
           E + + L +++P N G  ++++NIYA  EKWD V ++RKL+K++   K  G S+ +EV  
Sbjct: 421 EIASEALFKLEPTNPGNCVIMSNIYAANEKWDGVLRMRKLMKKETMTKAAGYSYFVEVGV 480

Query: 490 QVYQFYSFDMTHPSAEQIYKTLESM 512
            V++F   D +HP + +IY+ LE +
Sbjct: 481 DVHKFTVEDKSHPRSYEIYQVLEEI 489

BLAST of MS018147 vs. TAIR 10
Match: AT1G08070.1 (Tetratricopeptide repeat (TPR)-like superfamily protein )

HSP 1 Score: 366.3 bits (939), Expect = 4.0e-101
Identity = 203/609 (33.33%), Postives = 313/609 (51.40%), Query Frame = 0

Query: 1   LSVLEKCSHLNHLKQIQGFLISLGHSQTQFFAFKLVRFCNLT--LANLSYARFIFDQLNS 60
           LS+L  C  L  L+ I   +I +G   T +   KL+ FC L+     L YA  +F  +  
Sbjct: 37  LSLLHNCKTLQSLRIIHAQMIKIGLHNTNYALSKLIEFCILSPHFEGLPYAISVFKTIQE 96

Query: 61  PNVYLYTAMITAYASQPDSKAAFVLYRDMVRRGTPRPNHFIYPHVLKSCPEVLESNATQM 120
           PN+ ++  M   +A   D  +A  LY  M+  G   PN + +P VLKSC +       Q 
Sbjct: 97  PNLLIWNTMFRGHALSSDPVSALKLYVCMISLGL-LPNSYTFPFVLKSCAKSKAFKEGQQ 156

Query: 121 VHAQILKSGFGRYPVVQTAIVDSYSKFCSDIGIARQMFDEMIERSVVSWTAMISGYARLG 180
           +H  +LK G      V T+++  Y +    +  A ++FD+   R VVS+TA+I GYA  G
Sbjct: 157 IHGHVLKLGCDLDLYVHTSLISMYVQ-NGRLEDAHKVFDKSPHRDVVSYTALIKGYASRG 216

Query: 181 NIDDAVALFESMPERDVPAWNAIIAGFAQNGFFCEAIWLFRRMVSLAMEDDE-------- 240
            I++A  LF+ +P +DV +WNA+I+G+A+ G + EA+ LF+ M+   +  DE        
Sbjct: 217 YIENAQKLFDEIPVKDVVSWNAMISGYAETGNYKEALELFKDMMKTNVRPDESTMVTVVS 276

Query: 241 ------------------------------------------------------------ 300
                                                                       
Sbjct: 277 ACAQSGSIELGRQVHLWIDDHGFGSNLKIVNALIDLYSKCGELETACGLFERLPYKDVIS 336

Query: 301 -------------------------ERENKPNKITVASALSACGHTGMLHLGKWIHGYV- 360
                                         PN +T+ S L AC H G + +G+WIH Y+ 
Sbjct: 337 WNTLIGGYTHMNLYKEALLLFQEMLRSGETPNDVTMLSILPACAHLGAIDIGRWIHVYID 396

Query: 361 --FKSLGQDSFISNALLDMYGKCGNLKIAKRVFDMITLKSLTSWNSLINCLALHGHSESA 420
              K +   S +  +L+DMY KCG+++ A +VF+ I  KSL+SWN++I   A+HG ++++
Sbjct: 397 KRLKGVTNASSLRTSLIDMYAKCGDIEAAHQVFNSILHKSLSSWNAMIFGFAMHGRADAS 456

Query: 421 IDLFVKLVECGDGVKPDGVTFVGVLNACTHGGLVEKGYSYFEMMRRDYGIEPQIEHFGCL 480
            DLF ++ +   G++PD +TFVG+L+AC+H G+++ G   F  M +DY + P++EH+GC+
Sbjct: 457 FDLFSRMRKI--GIQPDDITFVGLLSACSHSGMLDLGRHIFRTMTQDYKMTPKLEHYGCM 516

Query: 481 IDLLGRAGRFEEAMEVVRGMNIEPDEVVWGSLLNGCKIHGRSDLAEYSVKKLIEMDPENG 512
           IDLLG +G F+EA E++  M +EPD V+W SLL  CK+HG  +L E   + LI+++PEN 
Sbjct: 517 IDLLGHSGLFKEAEEMINMMEMEPDGVIWCSLLKACKMHGNVELGESFAENLIKIEPENP 576

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
XP_022156007.11.6e-30199.22pentatricopeptide repeat-containing protein At1g33350 [Momordica charantia][more]
XP_038889416.14.5e-28090.86pentatricopeptide repeat-containing protein At1g33350-like [Benincasa hispida][more]
XP_022974048.15.3e-27388.69pentatricopeptide repeat-containing protein At1g33350 [Cucurbita maxima][more]
XP_022930176.11.5e-27288.50pentatricopeptide repeat-containing protein At1g33350 [Cucurbita moschata][more]
XP_023521314.11.4e-27087.91pentatricopeptide repeat-containing protein At1g33350-like [Cucurbita pepo subsp... [more]
Match NameE-valueIdentityDescription
Q9C5013.4e-17456.70Pentatricopeptide repeat-containing protein At1g33350 OS=Arabidopsis thaliana OX... [more]
Q9SIL51.1e-10638.46Pentatricopeptide repeat-containing protein At2g20540 OS=Arabidopsis thaliana OX... [more]
Q9FIF71.3e-10438.60Putative pentatricopeptide repeat-containing protein At5g59200, chloroplastic OS... [more]
Q9FNN73.3e-10037.82Pentatricopeptide repeat-containing protein At5g08510 OS=Arabidopsis thaliana OX... [more]
Q9LN015.6e-10033.33Pentatricopeptide repeat-containing protein At1g08070, chloroplastic OS=Arabidop... [more]
Match NameE-valueIdentityDescription
A0A6J1DQX17.7e-30299.22pentatricopeptide repeat-containing protein At1g33350 OS=Momordica charantia OX=... [more]
A0A6J1IF222.6e-27388.69pentatricopeptide repeat-containing protein At1g33350 OS=Cucurbita maxima OX=366... [more]
A0A6J1EQ767.5e-27388.50pentatricopeptide repeat-containing protein At1g33350 OS=Cucurbita moschata OX=3... [more]
A0A1S3CAA71.1e-26887.74pentatricopeptide repeat-containing protein At1g33350 OS=Cucumis melo OX=3656 GN... [more]
A0A5A7T7Y72.0e-25484.31Pentatricopeptide repeat-containing protein OS=Cucumis melo var. makuwa OX=11946... [more]
Match NameE-valueIdentityDescription
AT1G33350.12.4e-17556.70Pentatricopeptide repeat (PPR) superfamily protein [more]
AT2G20540.17.5e-10838.46mitochondrial editing factor 21 [more]
AT5G59200.19.1e-10638.60Tetratricopeptide repeat (TPR)-like superfamily protein [more]
AT5G08510.12.3e-10137.82Pentatricopeptide repeat (PPR) superfamily protein [more]
AT1G08070.14.0e-10133.33Tetratricopeptide repeat (TPR)-like superfamily protein [more]
InterPro
Analysis Name: InterPro Annotations of Bitter gourd (TR) v1
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR011990Tetratricopeptide-like helical domain superfamilyGENE3D1.25.40.10Tetratricopeptide repeat domaincoord: 135..270
e-value: 8.3E-24
score: 86.6
IPR011990Tetratricopeptide-like helical domain superfamilyGENE3D1.25.40.10Tetratricopeptide repeat domaincoord: 37..123
e-value: 1.3E-8
score: 36.3
IPR011990Tetratricopeptide-like helical domain superfamilyGENE3D1.25.40.10Tetratricopeptide repeat domaincoord: 275..504
e-value: 3.0E-40
score: 140.5
IPR011990Tetratricopeptide-like helical domain superfamilySUPERFAMILY48452TPR-likecoord: 55..464
IPR002885Pentatricopeptide repeatTIGRFAMTIGR00756TIGR00756coord: 341..374
e-value: 3.6E-4
score: 18.5
coord: 379..402
e-value: 6.0E-4
score: 17.8
coord: 305..333
e-value: 3.5E-4
score: 18.5
coord: 165..195
e-value: 3.9E-8
score: 31.0
IPR002885Pentatricopeptide repeatPFAMPF01535PPRcoord: 379..402
e-value: 0.0069
score: 16.6
coord: 197..223
e-value: 5.1E-4
score: 20.1
coord: 63..91
e-value: 0.041
score: 14.1
coord: 165..194
e-value: 1.1E-8
score: 34.7
coord: 305..333
e-value: 3.9E-5
score: 23.6
coord: 341..369
e-value: 0.039
score: 14.2
coord: 276..298
e-value: 0.089
score: 13.1
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 60..94
score: 9.174665
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 163..197
score: 12.057487
NoneNo IPR availablePANTHERPTHR47924:SF11SUBFAMILY NOT NAMEDcoord: 2..511
NoneNo IPR availablePANTHERPTHR47924PENTATRICOPEPTIDE REPEAT-CONTAINING PROTEINcoord: 2..511

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
MS018147.1MS018147.1mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
molecular_function GO:0005515 protein binding