MS018049 (gene) Bitter gourd (TR) v1

Overview
NameMS018049
Typegene
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
Descriptionpathogen-related protein-like
Locationscaffold1336: 197299 .. 198267 (-)
RNA-Seq ExpressionMS018049
SyntenyMS018049
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
AAAGATTTCACTATGGAGAAGTATCGTTCTCTTTTGAATGAAGATGAAGAGATCAAAAACACCCAGTGGAGATTTGGCGTTCCTCCTAATTATGCTGTTGTCAACAAGCTCTTTGAAGAAGAGAGGACTAATGTAATTTCTCTGTCTCTCTTTGATTTCTGGTTGCAAATTTATTATTTTTGCACTTAGATTGCAAAAGGGTATCATCCCTTTTAAGATTTTTGACTAAAAAATCTTACTTTGGAAGGTATGGGCTGTTGGGTCACTTGAAGAGAGAGTGCAGAGCCTAGTGAAGAATTTTGAAATGGAATTGTTCCATAAGGTTTCAAGCAGTGACTTCAAAACAATAGATTTAAGCAAGTTTACTTTCTGTCTCAATGGTAAGCAACCAAATCCCAAATGCTTGATGTGTTATTTCATTATGTTGATGATGAACAAACATTTCTCAGGAAGAGAGGCTTTAACTATTGAAGAAGTTAAAAAACTTGGGGGTTACAATCCCTTCCTTCAGACCTCCCTCCCTGAGGAATACAGGTACTACAATGCTGCAAATGAGACGGCGGAATCGTCTCACCGCGCATTCACGACGACGTTCCCTCGAGGATTTGCTCTTGAGATTGTCCAAGTTTATGCAGGGCCCCCTGACATTGTGTTCAAGTTCAGGCACTGGGGCTACATGGAGGGGCCTTTCAAAGGCCATGCCCCCACGGGGGAGAGAGTTGAATTCTATGGAGTAGCCAATTTTAAGGTGGGATTCAACATCAGTTCTTGTTTGTATTTTGCCCCCTTTCTTTGCTTTTCATTACTGAGATCTTTTTGATGAATCAGGTGGATGAGGAAGGTAAAATTGTGAAGGTGGAGTTCTTTTTTGATGCAGGGGAATTGCTTGGAAAACTCATGAGAGGTCCTGGCTTGGATGGCTCGGCGGAAGAGGCGGCTTCGAGCTGCCCTGTGTTGAGAAACACAGGG

mRNA sequence

AAAGATTTCACTATGGAGAAGTATCGTTCTCTTTTGAATGAAGATGAAGAGATCAAAAACACCCAGTGGAGATTTGGCGTTCCTCCTAATTATGCTGTTGTCAACAAGCTCTTTGAAGAAGAGAGGACTAATGTATGGGCTGTTGGGTCACTTGAAGAGAGAGTGCAGAGCCTAGTGAAGAATTTTGAAATGGAATTGTTCCATAAGGTTTCAAGCAGTGACTTCAAAACAATAGATTTAAGCAAGTTTACTTTCTGTCTCAATGGTAAGCAACCAAATCCCAAATGCTTGATGTGTTATTTCATTATGTTGATGATGAACAAACATTTCTCAGGAAGAGAGGCTTTAACTATTGAAGAAGTTAAAAAACTTGGGGGTTACAATCCCTTCCTTCAGACCTCCCTCCCTGAGGAATACAGGTACTACAATGCTGCAAATGAGACGGCGGAATCGTCTCACCGCGCATTCACGACGACGTTCCCTCGAGGATTTGCTCTTGAGATTGTCCAAGTTTATGCAGGGCCCCCTGACATTGTGTTCAAGTTCAGGCACTGGGGCTACATGGAGGGGCCTTTCAAAGGCCATGCCCCCACGGGGGAGAGAGTTGAATTCTATGGAGTAGCCAATTTTAAGGTGGGATTCAACATCAGTTCTTGTTTGTATTTTGCCCCCTTTCTTTGCTTTTCATTACTGTTTTTGATGAATCAGGTGGATGAGGAAGGTAAAATTGTGAAGGTGGAGTTCTTTTTTGATGCAGGGGAATTGCTTGGAAAACTCATGAGAGGTCCTGGCTTGGATGGCTCGGCGGAAGAGGCGGCTTCGAGCTGCCCTGTGTTGAGAAACACAGGG

Coding sequence (CDS)

AAAGATTTCACTATGGAGAAGTATCGTTCTCTTTTGAATGAAGATGAAGAGATCAAAAACACCCAGTGGAGATTTGGCGTTCCTCCTAATTATGCTGTTGTCAACAAGCTCTTTGAAGAAGAGAGGACTAATGTATGGGCTGTTGGGTCACTTGAAGAGAGAGTGCAGAGCCTAGTGAAGAATTTTGAAATGGAATTGTTCCATAAGGTTTCAAGCAGTGACTTCAAAACAATAGATTTAAGCAAGTTTACTTTCTGTCTCAATGGTAAGCAACCAAATCCCAAATGCTTGATGTGTTATTTCATTATGTTGATGATGAACAAACATTTCTCAGGAAGAGAGGCTTTAACTATTGAAGAAGTTAAAAAACTTGGGGGTTACAATCCCTTCCTTCAGACCTCCCTCCCTGAGGAATACAGGTACTACAATGCTGCAAATGAGACGGCGGAATCGTCTCACCGCGCATTCACGACGACGTTCCCTCGAGGATTTGCTCTTGAGATTGTCCAAGTTTATGCAGGGCCCCCTGACATTGTGTTCAAGTTCAGGCACTGGGGCTACATGGAGGGGCCTTTCAAAGGCCATGCCCCCACGGGGGAGAGAGTTGAATTCTATGGAGTAGCCAATTTTAAGGTGGGATTCAACATCAGTTCTTGTTTGTATTTTGCCCCCTTTCTTTGCTTTTCATTACTGTTTTTGATGAATCAGGTGGATGAGGAAGGTAAAATTGTGAAGGTGGAGTTCTTTTTTGATGCAGGGGAATTGCTTGGAAAACTCATGAGAGGTCCTGGCTTGGATGGCTCGGCGGAAGAGGCGGCTTCGAGCTGCCCTGTGTTGAGAAACACAGGG

Protein sequence

KDFTMEKYRSLLNEDEEIKNTQWRFGVPPNYAVVNKLFEEERTNVWAVGSLEERVQSLVKNFEMELFHKVSSSDFKTIDLSKFTFCLNGKQPNPKCLMCYFIMLMMNKHFSGREALTIEEVKKLGGYNPFLQTSLPEEYRYYNAANETAESSHRAFTTTFPRGFALEIVQVYAGPPDIVFKFRHWGYMEGPFKGHAPTGERVEFYGVANFKVGFNISSCLYFAPFLCFSLLFLMNQVDEEGKIVKVEFFFDAGELLGKLMRGPGLDGSAEEAASSCPVLRNTG
Homology
BLAST of MS018049 vs. NCBI nr
Match: XP_022141379.1 (pathogen-related protein-like [Momordica charantia])

HSP 1 Score: 458.8 bits (1179), Expect = 3.5e-125
Identity = 235/283 (83.04%), Postives = 235/283 (83.04%), Query Frame = 0

Query: 1   KDFTMEKYRSLLNEDEEIKNTQWRFGVPPNYAVVNKLFEEERTNVWAVGSLEERVQSLVK 60
           KDFTMEKYRSLLNEDEEIKNTQWRFGVPPNYAVVNKLFEEERTNVWAVGSLEERVQSLVK
Sbjct: 15  KDFTMEKYRSLLNEDEEIKNTQWRFGVPPNYAVVNKLFEEERTNVWAVGSLEERVQSLVK 74

Query: 61  NFEMELFHKVSSSDFKTIDLSKFTFCLNGKQPNPKCLMCYFIMLMMNKHFSGREALTIEE 120
           NFEMELFHKVSSSDFKTIDLSKFTFCLN                       GREALTIEE
Sbjct: 75  NFEMELFHKVSSSDFKTIDLSKFTFCLN-----------------------GREALTIEE 134

Query: 121 VKKLGGYNPFLQTSLPEEYRYYNAANETAESSHRAFTTTFPRGFALEIVQVYAGPPDIVF 180
           VKKLGGYNPFLQTSLPEEYRYYNAANETAESSHRAFTTTFPRGFALEIVQVYAGPPDIVF
Sbjct: 135 VKKLGGYNPFLQTSLPEEYRYYNAANETAESSHRAFTTTFPRGFALEIVQVYAGPPDIVF 194

Query: 181 KFRHWGYMEGPFKGHAPTGERVEFYGVANFKVGFNISSCLYFAPFLCFSLLFLMNQVDEE 240
           KFRHWGYMEGPFKGHAPTGERVEFYGVANFK                         VDEE
Sbjct: 195 KFRHWGYMEGPFKGHAPTGERVEFYGVANFK-------------------------VDEE 249

Query: 241 GKIVKVEFFFDAGELLGKLMRGPGLDGSAEEAASSCPVLRNTG 284
           GKIVKVEFFFDAGELLGKLMRGPGLDGSAEEAASSCPVLRNTG
Sbjct: 255 GKIVKVEFFFDAGELLGKLMRGPGLDGSAEEAASSCPVLRNTG 249

BLAST of MS018049 vs. NCBI nr
Match: XP_016899457.1 (PREDICTED: pathogen-related protein-like isoform X1 [Cucumis melo])

HSP 1 Score: 389.4 bits (999), Expect = 2.6e-104
Identity = 194/278 (69.78%), Postives = 218/278 (78.42%), Query Frame = 0

Query: 6   EKYRSLLNEDEEIKNTQWRFGVPPNYAVVNKLFEEERTNVWAVGSLEERVQSLVKNFEME 65
           EKYRSLL+ DEE KNT+WR+GVPPNY +VNKLFEEERTNVW VGSLEERVQSLVKNFEME
Sbjct: 6   EKYRSLLSGDEE-KNTKWRYGVPPNYDIVNKLFEEERTNVWPVGSLEERVQSLVKNFEME 65

Query: 66  LFHKVSSSDFKTIDLSKFTFCLNGKQPNPKCLMCYFIMLMMNKHFSGREALTIEEVKKLG 125
           +FHK+S SDFKTID++K+TFCLNG++P                       L I EV KLG
Sbjct: 66  MFHKISPSDFKTIDVNKYTFCLNGRKP-----------------------LAIGEVSKLG 125

Query: 126 GYNPFLQTSLPEEYRYYNAANETAESSHRAFTTTFPRGFALEIVQVYAGPPDIVFKFRHW 185
           GYNPFLQT+LP+EYRYYNA  ETAESSHRAFT TF RGFALEI+QVY+GPP+IVFKFRHW
Sbjct: 126 GYNPFLQTALPDEYRYYNAEKETAESSHRAFTATFLRGFALEIIQVYSGPPNIVFKFRHW 185

Query: 186 GYMEGPFKGHAPTGERVEFYGVANFKVGFNISSCLYFAPFLCFSLLFLMNQVDEEGKIVK 245
           GYMEGPF+ HA TGER+EFYGVA FKV  N   C Y        L FLMNQV+E+ KI  
Sbjct: 186 GYMEGPFRNHAATGERIEFYGVAIFKVRPNFKFCWYVTHSGLSLLNFLMNQVNEKDKIEG 245

Query: 246 VEFFFDAGELLGKLMRGPGLDGSAEEAASSCPVLRNTG 284
           VEFFFD  EL+GKL++GPGLDGS E+A SSCPVLRNTG
Sbjct: 246 VEFFFDPAELVGKLLKGPGLDGSVEKAISSCPVLRNTG 259

BLAST of MS018049 vs. NCBI nr
Match: XP_023551110.1 (pathogen-related protein-like isoform X1 [Cucurbita pepo subsp. pepo] >XP_023551111.1 pathogen-related protein-like isoform X1 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 373.2 bits (957), Expect = 1.9e-99
Identity = 189/278 (67.99%), Postives = 209/278 (75.18%), Query Frame = 0

Query: 6   EKYRSLLNEDEEIKNTQWRFGVPPNYAVVNKLFEEERTNVWAVGSLEERVQSLVKNFEME 65
           EKYRSLL  DEE KNT+WRFGVPPNY VVNKLFEEERTNVW VGSLEERVQSLVKNFEME
Sbjct: 6   EKYRSLLLGDEE-KNTKWRFGVPPNYDVVNKLFEEERTNVWPVGSLEERVQSLVKNFEME 65

Query: 66  LFHKVSSSDFKTIDLSKFTFCLNGKQPNPKCLMCYFIMLMMNKHFSGREALTIEEVKKLG 125
           +FHK+SS+DF+TIDL+KFTFCLNG++P                       L+IEE  KLG
Sbjct: 66  MFHKISSTDFRTIDLNKFTFCLNGRKP-----------------------LSIEETSKLG 125

Query: 126 GYNPFLQTSLPEEYRYYNAANETAESSHRAFTTTFPRGFALEIVQVYAGPPDIVFKFRHW 185
           GYNPFLQTS+PEEYRYYNAA ETA SSH+AFT TFPRGFALEI+QVY+GPPDIVFKFRHW
Sbjct: 126 GYNPFLQTSIPEEYRYYNAAKETAASSHQAFTATFPRGFALEIIQVYSGPPDIVFKFRHW 185

Query: 186 GYMEGPFKGHAPTGERVEFYGVANFKVGFNISSCLYFAPFLCFSLLFLMNQVDEEGKIVK 245
           GYMEG FK HAPTGER+EF+GVA FK                         V+E   I+ 
Sbjct: 186 GYMEGAFKSHAPTGERIEFFGVAIFK-------------------------VNENDIILG 234

Query: 246 VEFFFDAGELLGKLMRGPGLDGSAEEAASSCPVLRNTG 284
           VEFFFD GELLGKLM+GP LDGS E+A SSCP+LRNTG
Sbjct: 246 VEFFFDPGELLGKLMKGPRLDGSVEKAVSSCPILRNTG 234

BLAST of MS018049 vs. NCBI nr
Match: XP_023551112.1 (pathogen-related protein-like isoform X2 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 373.2 bits (957), Expect = 1.9e-99
Identity = 189/278 (67.99%), Postives = 209/278 (75.18%), Query Frame = 0

Query: 6   EKYRSLLNEDEEIKNTQWRFGVPPNYAVVNKLFEEERTNVWAVGSLEERVQSLVKNFEME 65
           EKYRSLL  DEE KNT+WRFGVPPNY VVNKLFEEERTNVW VGSLEERVQSLVKNFEME
Sbjct: 6   EKYRSLLLGDEE-KNTKWRFGVPPNYDVVNKLFEEERTNVWPVGSLEERVQSLVKNFEME 65

Query: 66  LFHKVSSSDFKTIDLSKFTFCLNGKQPNPKCLMCYFIMLMMNKHFSGREALTIEEVKKLG 125
           +FHK+SS+DF+TIDL+KFTFCLNG++P                       L+IEE  KLG
Sbjct: 66  MFHKISSTDFRTIDLNKFTFCLNGRKP-----------------------LSIEETSKLG 125

Query: 126 GYNPFLQTSLPEEYRYYNAANETAESSHRAFTTTFPRGFALEIVQVYAGPPDIVFKFRHW 185
           GYNPFLQTS+PEEYRYYNAA ETA SSH+AFT TFPRGFALEI+QVY+GPPDIVFKFRHW
Sbjct: 126 GYNPFLQTSIPEEYRYYNAAKETAASSHQAFTATFPRGFALEIIQVYSGPPDIVFKFRHW 185

Query: 186 GYMEGPFKGHAPTGERVEFYGVANFKVGFNISSCLYFAPFLCFSLLFLMNQVDEEGKIVK 245
           GYMEG FK HAPTGER+EF+GVA FK                         V+E   I+ 
Sbjct: 186 GYMEGAFKSHAPTGERIEFFGVAIFK-------------------------VNENDIILG 234

Query: 246 VEFFFDAGELLGKLMRGPGLDGSAEEAASSCPVLRNTG 284
           VEFFFD GELLGKLM+GP LDGS E+A SSCP+LRNTG
Sbjct: 246 VEFFFDPGELLGKLMKGPRLDGSVEKAVSSCPILRNTG 234

BLAST of MS018049 vs. NCBI nr
Match: XP_023551113.1 (pathogen-related protein-like isoform X3 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 373.2 bits (957), Expect = 1.9e-99
Identity = 189/278 (67.99%), Postives = 209/278 (75.18%), Query Frame = 0

Query: 6   EKYRSLLNEDEEIKNTQWRFGVPPNYAVVNKLFEEERTNVWAVGSLEERVQSLVKNFEME 65
           EKYRSLL  DEE KNT+WRFGVPPNY VVNKLFEEERTNVW VGSLEERVQSLVKNFEME
Sbjct: 6   EKYRSLLLGDEE-KNTKWRFGVPPNYDVVNKLFEEERTNVWPVGSLEERVQSLVKNFEME 65

Query: 66  LFHKVSSSDFKTIDLSKFTFCLNGKQPNPKCLMCYFIMLMMNKHFSGREALTIEEVKKLG 125
           +FHK+SS+DF+TIDL+KFTFCLNG++P                       L+IEE  KLG
Sbjct: 66  MFHKISSTDFRTIDLNKFTFCLNGRKP-----------------------LSIEETSKLG 125

Query: 126 GYNPFLQTSLPEEYRYYNAANETAESSHRAFTTTFPRGFALEIVQVYAGPPDIVFKFRHW 185
           GYNPFLQTS+PEEYRYYNAA ETA SSH+AFT TFPRGFALEI+QVY+GPPDIVFKFRHW
Sbjct: 126 GYNPFLQTSIPEEYRYYNAAKETAASSHQAFTATFPRGFALEIIQVYSGPPDIVFKFRHW 185

Query: 186 GYMEGPFKGHAPTGERVEFYGVANFKVGFNISSCLYFAPFLCFSLLFLMNQVDEEGKIVK 245
           GYMEG FK HAPTGER+EF+GVA FK                         V+E   I+ 
Sbjct: 186 GYMEGAFKSHAPTGERIEFFGVAIFK-------------------------VNENDIILG 234

Query: 246 VEFFFDAGELLGKLMRGPGLDGSAEEAASSCPVLRNTG 284
           VEFFFD GELLGKLM+GP LDGS E+A SSCP+LRNTG
Sbjct: 246 VEFFFDPGELLGKLMKGPRLDGSVEKAVSSCPILRNTG 234

BLAST of MS018049 vs. ExPASy Swiss-Prot
Match: P16273 (Pathogen-related protein OS=Hordeum vulgare OX=4513 PE=2 SV=2)

HSP 1 Score: 231.5 bits (589), Expect = 1.2e-59
Identity = 125/277 (45.13%), Postives = 158/277 (57.04%), Query Frame = 0

Query: 6   EKYRSLLNEDEEIKNTQWRFGVPPNYAVVNKLFEEERTNVWAVGSLEERVQSLVKNFEME 65
           +KYRS L+ D E K T WR G PPNY +VNKLFEEERT  WA GS+EE+VQ L+K +EME
Sbjct: 9   DKYRSFLHGDGE-KKTVWRHGAPPNYDLVNKLFEEERTKEWAEGSVEEKVQRLLKTWEME 68

Query: 66  LFHKVSSSDFKTIDLSKFTFCLNGKQPNPKCLMCYFIMLMMNKHFSGREALTIEEVKKLG 125
           + HKV   D K+++L  ++   NG +P                       LT EEV  +G
Sbjct: 69  MVHKVRPEDQKSVNLKNYSASTNGLKP-----------------------LTREEVMAMG 128

Query: 126 GYNPFLQTSLPEEYRYYNAANETAESSHRAFTTTFPRGFALEIVQVYAGP--PDIVFKFR 185
           GYN FL T+LP E+R Y+   E+ ES+   F T FPRGFA+E++ VY+ P  P I FKFR
Sbjct: 129 GYNAFLATTLPPEHRIYDPEAESVESATSTFLTAFPRGFAIEVLDVYSSPSAPRIAFKFR 188

Query: 186 HWGYMEGPFKGHAPTGERVEFYGVANFKVGFNISSCLYFAPFLCFSLLFLMNQVDEEGKI 245
           HWGYMEGPFKGH P G RVEF+GV  F                          VDE+ K+
Sbjct: 189 HWGYMEGPFKGHPPHGGRVEFFGVCVF-------------------------HVDEDTKV 232

Query: 246 VKVEFFFDAGELLGKLMRGPGLDGSAEEAASSCPVLR 281
            K EFF++ G  L   +  P    +A  +AS CPV+R
Sbjct: 249 EKAEFFYERGNFLASFLTAP----AASASASGCPVMR 232

BLAST of MS018049 vs. ExPASy TrEMBL
Match: A0A6J1CIG9 (pathogen-related protein-like OS=Momordica charantia OX=3673 GN=LOC111011793 PE=4 SV=1)

HSP 1 Score: 458.8 bits (1179), Expect = 1.7e-125
Identity = 235/283 (83.04%), Postives = 235/283 (83.04%), Query Frame = 0

Query: 1   KDFTMEKYRSLLNEDEEIKNTQWRFGVPPNYAVVNKLFEEERTNVWAVGSLEERVQSLVK 60
           KDFTMEKYRSLLNEDEEIKNTQWRFGVPPNYAVVNKLFEEERTNVWAVGSLEERVQSLVK
Sbjct: 15  KDFTMEKYRSLLNEDEEIKNTQWRFGVPPNYAVVNKLFEEERTNVWAVGSLEERVQSLVK 74

Query: 61  NFEMELFHKVSSSDFKTIDLSKFTFCLNGKQPNPKCLMCYFIMLMMNKHFSGREALTIEE 120
           NFEMELFHKVSSSDFKTIDLSKFTFCLN                       GREALTIEE
Sbjct: 75  NFEMELFHKVSSSDFKTIDLSKFTFCLN-----------------------GREALTIEE 134

Query: 121 VKKLGGYNPFLQTSLPEEYRYYNAANETAESSHRAFTTTFPRGFALEIVQVYAGPPDIVF 180
           VKKLGGYNPFLQTSLPEEYRYYNAANETAESSHRAFTTTFPRGFALEIVQVYAGPPDIVF
Sbjct: 135 VKKLGGYNPFLQTSLPEEYRYYNAANETAESSHRAFTTTFPRGFALEIVQVYAGPPDIVF 194

Query: 181 KFRHWGYMEGPFKGHAPTGERVEFYGVANFKVGFNISSCLYFAPFLCFSLLFLMNQVDEE 240
           KFRHWGYMEGPFKGHAPTGERVEFYGVANFK                         VDEE
Sbjct: 195 KFRHWGYMEGPFKGHAPTGERVEFYGVANFK-------------------------VDEE 249

Query: 241 GKIVKVEFFFDAGELLGKLMRGPGLDGSAEEAASSCPVLRNTG 284
           GKIVKVEFFFDAGELLGKLMRGPGLDGSAEEAASSCPVLRNTG
Sbjct: 255 GKIVKVEFFFDAGELLGKLMRGPGLDGSAEEAASSCPVLRNTG 249

BLAST of MS018049 vs. ExPASy TrEMBL
Match: A0A1S4DTY2 (pathogen-related protein-like isoform X1 OS=Cucumis melo OX=3656 GN=LOC103485647 PE=4 SV=1)

HSP 1 Score: 389.4 bits (999), Expect = 1.3e-104
Identity = 194/278 (69.78%), Postives = 218/278 (78.42%), Query Frame = 0

Query: 6   EKYRSLLNEDEEIKNTQWRFGVPPNYAVVNKLFEEERTNVWAVGSLEERVQSLVKNFEME 65
           EKYRSLL+ DEE KNT+WR+GVPPNY +VNKLFEEERTNVW VGSLEERVQSLVKNFEME
Sbjct: 6   EKYRSLLSGDEE-KNTKWRYGVPPNYDIVNKLFEEERTNVWPVGSLEERVQSLVKNFEME 65

Query: 66  LFHKVSSSDFKTIDLSKFTFCLNGKQPNPKCLMCYFIMLMMNKHFSGREALTIEEVKKLG 125
           +FHK+S SDFKTID++K+TFCLNG++P                       L I EV KLG
Sbjct: 66  MFHKISPSDFKTIDVNKYTFCLNGRKP-----------------------LAIGEVSKLG 125

Query: 126 GYNPFLQTSLPEEYRYYNAANETAESSHRAFTTTFPRGFALEIVQVYAGPPDIVFKFRHW 185
           GYNPFLQT+LP+EYRYYNA  ETAESSHRAFT TF RGFALEI+QVY+GPP+IVFKFRHW
Sbjct: 126 GYNPFLQTALPDEYRYYNAEKETAESSHRAFTATFLRGFALEIIQVYSGPPNIVFKFRHW 185

Query: 186 GYMEGPFKGHAPTGERVEFYGVANFKVGFNISSCLYFAPFLCFSLLFLMNQVDEEGKIVK 245
           GYMEGPF+ HA TGER+EFYGVA FKV  N   C Y        L FLMNQV+E+ KI  
Sbjct: 186 GYMEGPFRNHAATGERIEFYGVAIFKVRPNFKFCWYVTHSGLSLLNFLMNQVNEKDKIEG 245

Query: 246 VEFFFDAGELLGKLMRGPGLDGSAEEAASSCPVLRNTG 284
           VEFFFD  EL+GKL++GPGLDGS E+A SSCPVLRNTG
Sbjct: 246 VEFFFDPAELVGKLLKGPGLDGSVEKAISSCPVLRNTG 259

BLAST of MS018049 vs. ExPASy TrEMBL
Match: A0A6J1FND6 (pathogen-related protein-like isoform X3 OS=Cucurbita moschata OX=3662 GN=LOC111445489 PE=4 SV=1)

HSP 1 Score: 372.9 bits (956), Expect = 1.2e-99
Identity = 188/278 (67.63%), Postives = 209/278 (75.18%), Query Frame = 0

Query: 6   EKYRSLLNEDEEIKNTQWRFGVPPNYAVVNKLFEEERTNVWAVGSLEERVQSLVKNFEME 65
           EKYRSLL  DEE KNT+WRFGVPPNY VVNKLFEEERTNVW VGSLEERVQSLVKNFEME
Sbjct: 6   EKYRSLLRGDEE-KNTKWRFGVPPNYDVVNKLFEEERTNVWPVGSLEERVQSLVKNFEME 65

Query: 66  LFHKVSSSDFKTIDLSKFTFCLNGKQPNPKCLMCYFIMLMMNKHFSGREALTIEEVKKLG 125
           +FHK+S++DF+TIDL+KFTFCLNG++P                       L+IEE  KLG
Sbjct: 66  MFHKISTTDFRTIDLNKFTFCLNGRKP-----------------------LSIEETSKLG 125

Query: 126 GYNPFLQTSLPEEYRYYNAANETAESSHRAFTTTFPRGFALEIVQVYAGPPDIVFKFRHW 185
           GYNPFLQTS+PEEYRYYNAA ETA SSH+AFT TFPRGFALEI+QVY+GPPDIVFKFRHW
Sbjct: 126 GYNPFLQTSIPEEYRYYNAAKETAASSHQAFTATFPRGFALEIIQVYSGPPDIVFKFRHW 185

Query: 186 GYMEGPFKGHAPTGERVEFYGVANFKVGFNISSCLYFAPFLCFSLLFLMNQVDEEGKIVK 245
           GYMEG FK HAPTGER+EF+GVA FK                         V+E   I+ 
Sbjct: 186 GYMEGAFKSHAPTGERIEFFGVAIFK-------------------------VNENDIILG 234

Query: 246 VEFFFDAGELLGKLMRGPGLDGSAEEAASSCPVLRNTG 284
           VEFFFD GELLGKLM+GP LDGS E+A SSCP+LRNTG
Sbjct: 246 VEFFFDPGELLGKLMKGPCLDGSVEKAVSSCPILRNTG 234

BLAST of MS018049 vs. ExPASy TrEMBL
Match: A0A6J1FM94 (pathogen-related protein-like isoform X2 OS=Cucurbita moschata OX=3662 GN=LOC111445489 PE=4 SV=1)

HSP 1 Score: 372.9 bits (956), Expect = 1.2e-99
Identity = 188/278 (67.63%), Postives = 209/278 (75.18%), Query Frame = 0

Query: 6   EKYRSLLNEDEEIKNTQWRFGVPPNYAVVNKLFEEERTNVWAVGSLEERVQSLVKNFEME 65
           EKYRSLL  DEE KNT+WRFGVPPNY VVNKLFEEERTNVW VGSLEERVQSLVKNFEME
Sbjct: 6   EKYRSLLRGDEE-KNTKWRFGVPPNYDVVNKLFEEERTNVWPVGSLEERVQSLVKNFEME 65

Query: 66  LFHKVSSSDFKTIDLSKFTFCLNGKQPNPKCLMCYFIMLMMNKHFSGREALTIEEVKKLG 125
           +FHK+S++DF+TIDL+KFTFCLNG++P                       L+IEE  KLG
Sbjct: 66  MFHKISTTDFRTIDLNKFTFCLNGRKP-----------------------LSIEETSKLG 125

Query: 126 GYNPFLQTSLPEEYRYYNAANETAESSHRAFTTTFPRGFALEIVQVYAGPPDIVFKFRHW 185
           GYNPFLQTS+PEEYRYYNAA ETA SSH+AFT TFPRGFALEI+QVY+GPPDIVFKFRHW
Sbjct: 126 GYNPFLQTSIPEEYRYYNAAKETAASSHQAFTATFPRGFALEIIQVYSGPPDIVFKFRHW 185

Query: 186 GYMEGPFKGHAPTGERVEFYGVANFKVGFNISSCLYFAPFLCFSLLFLMNQVDEEGKIVK 245
           GYMEG FK HAPTGER+EF+GVA FK                         V+E   I+ 
Sbjct: 186 GYMEGAFKSHAPTGERIEFFGVAIFK-------------------------VNENDIILG 234

Query: 246 VEFFFDAGELLGKLMRGPGLDGSAEEAASSCPVLRNTG 284
           VEFFFD GELLGKLM+GP LDGS E+A SSCP+LRNTG
Sbjct: 246 VEFFFDPGELLGKLMKGPCLDGSVEKAVSSCPILRNTG 234

BLAST of MS018049 vs. ExPASy TrEMBL
Match: A0A6J1FHG3 (pathogen-related protein-like isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111445489 PE=4 SV=1)

HSP 1 Score: 372.9 bits (956), Expect = 1.2e-99
Identity = 188/278 (67.63%), Postives = 209/278 (75.18%), Query Frame = 0

Query: 6   EKYRSLLNEDEEIKNTQWRFGVPPNYAVVNKLFEEERTNVWAVGSLEERVQSLVKNFEME 65
           EKYRSLL  DEE KNT+WRFGVPPNY VVNKLFEEERTNVW VGSLEERVQSLVKNFEME
Sbjct: 6   EKYRSLLRGDEE-KNTKWRFGVPPNYDVVNKLFEEERTNVWPVGSLEERVQSLVKNFEME 65

Query: 66  LFHKVSSSDFKTIDLSKFTFCLNGKQPNPKCLMCYFIMLMMNKHFSGREALTIEEVKKLG 125
           +FHK+S++DF+TIDL+KFTFCLNG++P                       L+IEE  KLG
Sbjct: 66  MFHKISTTDFRTIDLNKFTFCLNGRKP-----------------------LSIEETSKLG 125

Query: 126 GYNPFLQTSLPEEYRYYNAANETAESSHRAFTTTFPRGFALEIVQVYAGPPDIVFKFRHW 185
           GYNPFLQTS+PEEYRYYNAA ETA SSH+AFT TFPRGFALEI+QVY+GPPDIVFKFRHW
Sbjct: 126 GYNPFLQTSIPEEYRYYNAAKETAASSHQAFTATFPRGFALEIIQVYSGPPDIVFKFRHW 185

Query: 186 GYMEGPFKGHAPTGERVEFYGVANFKVGFNISSCLYFAPFLCFSLLFLMNQVDEEGKIVK 245
           GYMEG FK HAPTGER+EF+GVA FK                         V+E   I+ 
Sbjct: 186 GYMEGAFKSHAPTGERIEFFGVAIFK-------------------------VNENDIILG 234

Query: 246 VEFFFDAGELLGKLMRGPGLDGSAEEAASSCPVLRNTG 284
           VEFFFD GELLGKLM+GP LDGS E+A SSCP+LRNTG
Sbjct: 246 VEFFFDPGELLGKLMKGPCLDGSVEKAVSSCPILRNTG 234

BLAST of MS018049 vs. TAIR 10
Match: AT1G78780.2 (pathogenesis-related family protein )

HSP 1 Score: 217.6 bits (553), Expect = 1.3e-56
Identity = 120/281 (42.70%), Postives = 156/281 (55.52%), Query Frame = 0

Query: 6   EKYRSLLNEDEEIKNTQWRFGVPPNYAVVNKLFEEERTNVWAVGSLEERVQSLVKNFEME 65
           +KYRS+L   E+    QWR+  PP++  VN+LFEE +T VW  GSLEE VQ+ +K++EME
Sbjct: 8   DKYRSVL---EDAGQVQWRYDNPPDFNSVNQLFEEGQTKVWPEGSLEETVQNAIKSWEME 67

Query: 66  LFHKVSSSDFKTIDLSKFTFCLNGKQPNPKCLMCYFIMLMMNKHFSGREALTIEEVKKLG 125
             HK+   DFKTI+  KF   +N                       GRE L+ EE  +LG
Sbjct: 68  FSHKIRLQDFKTINPEKFKLFVN-----------------------GREGLSAEETLRLG 127

Query: 126 GYNPFLQTSLPEEYRYYNAANETAESSHRAFTTTFPRGFALEIVQVYAGPPDIVFKFRHW 185
            YN  L+ SLPEE++YY    E+ ESSH AF +  PRGFA EI+ VY+GPP I FKFRHW
Sbjct: 128 SYNALLKNSLPEEFQYYKPEEESFESSHDAFRSALPRGFAWEILSVYSGPPVIAFKFRHW 187

Query: 186 GYMEGPFKGHAPTGERVEFYGVANFKVGFNISSCLYFAPFLCFSLLFLMNQVDEEGKIVK 245
           GY EG FKGHAPTGE V+F G+   K                         VDE  +  +
Sbjct: 188 GYFEGTFKGHAPTGEMVQFLGLGVLK-------------------------VDESLRAEE 235

Query: 246 VEFFFDAGELLGKLMRGPGL---------DGSAEEAASSCP 278
           +E ++D GEL G L++GP +         D +AE+   SCP
Sbjct: 248 IEIYYDPGELFGGLLKGPPISETKTTDSGDNTAEK--QSCP 235

BLAST of MS018049 vs. TAIR 10
Match: AT1G78780.4 (pathogenesis-related family protein )

HSP 1 Score: 212.2 bits (539), Expect = 5.3e-55
Identity = 118/281 (41.99%), Postives = 154/281 (54.80%), Query Frame = 0

Query: 6   EKYRSLLNEDEEIKNTQWRFGVPPNYAVVNKLFEEERTNVWAVGSLEERVQSLVKNFEME 65
           +KYRS+L   E+    QWR+  PP++  VN+LFEE +T VW  GSLEE VQ+ +K++EME
Sbjct: 8   DKYRSVL---EDAGQVQWRYDNPPDFNSVNQLFEEGQTKVWPEGSLEETVQNAIKSWEME 67

Query: 66  LFHKVSSSDFKTIDLSKFTFCLNGKQPNPKCLMCYFIMLMMNKHFSGREALTIEEVKKLG 125
             HK+   DFKTI+  KF   +NG                          L+ EE  +LG
Sbjct: 68  FSHKIRLQDFKTINPEKFKLFVNG--------------------------LSAEETLRLG 127

Query: 126 GYNPFLQTSLPEEYRYYNAANETAESSHRAFTTTFPRGFALEIVQVYAGPPDIVFKFRHW 185
            YN  L+ SLPEE++YY    E+ ESSH AF +  PRGFA EI+ VY+GPP I FKFRHW
Sbjct: 128 SYNALLKNSLPEEFQYYKPEEESFESSHDAFRSALPRGFAWEILSVYSGPPVIAFKFRHW 187

Query: 186 GYMEGPFKGHAPTGERVEFYGVANFKVGFNISSCLYFAPFLCFSLLFLMNQVDEEGKIVK 245
           GY EG FKGHAPTGE V+F G+   K                         VDE  +  +
Sbjct: 188 GYFEGTFKGHAPTGEMVQFLGLGVLK-------------------------VDESLRAEE 232

Query: 246 VEFFFDAGELLGKLMRGPGL---------DGSAEEAASSCP 278
           +E ++D GEL G L++GP +         D +AE+   SCP
Sbjct: 248 IEIYYDPGELFGGLLKGPPISETKTTDSGDNTAEK--QSCP 232

BLAST of MS018049 vs. TAIR 10
Match: AT1G78780.1 (pathogenesis-related family protein )

HSP 1 Score: 160.2 bits (404), Expect = 2.4e-39
Identity = 91/223 (40.81%), Postives = 115/223 (51.57%), Query Frame = 0

Query: 64  MELFHKVSSSDFKTIDLSKFTFCLNGKQPNPKCLMCYFIMLMMNKHFSGREALTIEEVKK 123
           ME  HK+   DFKTI+  KF   +N                       GRE L+ EE  +
Sbjct: 1   MEFSHKIRLQDFKTINPEKFKLFVN-----------------------GREGLSAEETLR 60

Query: 124 LGGYNPFLQTSLPEEYRYYNAANETAESSHRAFTTTFPRGFALEIVQVYAGPPDIVFKFR 183
           LG YN  L+ SLPEE++YY    E+ ESSH AF +  PRGFA EI+ VY+GPP I FKFR
Sbjct: 61  LGSYNALLKNSLPEEFQYYKPEEESFESSHDAFRSALPRGFAWEILSVYSGPPVIAFKFR 120

Query: 184 HWGYMEGPFKGHAPTGERVEFYGVANFKVGFNISSCLYFAPFLCFSLLFLMNQVDEEGKI 243
           HWGY EG FKGHAPTGE V+F G+   K                         VDE  + 
Sbjct: 121 HWGYFEGTFKGHAPTGEMVQFLGLGVLK-------------------------VDESLRA 173

Query: 244 VKVEFFFDAGELLGKLMRGPGL---------DGSAEEAASSCP 278
            ++E ++D GEL G L++GP +         D +AE+   SCP
Sbjct: 181 EEIEIYYDPGELFGGLLKGPPISETKTTDSGDNTAEK--QSCP 173

BLAST of MS018049 vs. TAIR 10
Match: AT1G78780.3 (pathogenesis-related family protein )

HSP 1 Score: 160.2 bits (404), Expect = 2.4e-39
Identity = 91/223 (40.81%), Postives = 115/223 (51.57%), Query Frame = 0

Query: 64  MELFHKVSSSDFKTIDLSKFTFCLNGKQPNPKCLMCYFIMLMMNKHFSGREALTIEEVKK 123
           ME  HK+   DFKTI+  KF   +N                       GRE L+ EE  +
Sbjct: 1   MEFSHKIRLQDFKTINPEKFKLFVN-----------------------GREGLSAEETLR 60

Query: 124 LGGYNPFLQTSLPEEYRYYNAANETAESSHRAFTTTFPRGFALEIVQVYAGPPDIVFKFR 183
           LG YN  L+ SLPEE++YY    E+ ESSH AF +  PRGFA EI+ VY+GPP I FKFR
Sbjct: 61  LGSYNALLKNSLPEEFQYYKPEEESFESSHDAFRSALPRGFAWEILSVYSGPPVIAFKFR 120

Query: 184 HWGYMEGPFKGHAPTGERVEFYGVANFKVGFNISSCLYFAPFLCFSLLFLMNQVDEEGKI 243
           HWGY EG FKGHAPTGE V+F G+   K                         VDE  + 
Sbjct: 121 HWGYFEGTFKGHAPTGEMVQFLGLGVLK-------------------------VDESLRA 173

Query: 244 VKVEFFFDAGELLGKLMRGPGL---------DGSAEEAASSCP 278
            ++E ++D GEL G L++GP +         D +AE+   SCP
Sbjct: 181 EEIEIYYDPGELFGGLLKGPPISETKTTDSGDNTAEK--QSCP 173

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
XP_022141379.13.5e-12583.04pathogen-related protein-like [Momordica charantia][more]
XP_016899457.12.6e-10469.78PREDICTED: pathogen-related protein-like isoform X1 [Cucumis melo][more]
XP_023551110.11.9e-9967.99pathogen-related protein-like isoform X1 [Cucurbita pepo subsp. pepo] >XP_023551... [more]
XP_023551112.11.9e-9967.99pathogen-related protein-like isoform X2 [Cucurbita pepo subsp. pepo][more]
XP_023551113.11.9e-9967.99pathogen-related protein-like isoform X3 [Cucurbita pepo subsp. pepo][more]
Match NameE-valueIdentityDescription
P162731.2e-5945.13Pathogen-related protein OS=Hordeum vulgare OX=4513 PE=2 SV=2[more]
Match NameE-valueIdentityDescription
A0A6J1CIG91.7e-12583.04pathogen-related protein-like OS=Momordica charantia OX=3673 GN=LOC111011793 PE=... [more]
A0A1S4DTY21.3e-10469.78pathogen-related protein-like isoform X1 OS=Cucumis melo OX=3656 GN=LOC103485647... [more]
A0A6J1FND61.2e-9967.63pathogen-related protein-like isoform X3 OS=Cucurbita moschata OX=3662 GN=LOC111... [more]
A0A6J1FM941.2e-9967.63pathogen-related protein-like isoform X2 OS=Cucurbita moschata OX=3662 GN=LOC111... [more]
A0A6J1FHG31.2e-9967.63pathogen-related protein-like isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111... [more]
Match NameE-valueIdentityDescription
AT1G78780.21.3e-5642.70pathogenesis-related family protein [more]
AT1G78780.45.3e-5541.99pathogenesis-related family protein [more]
AT1G78780.12.4e-3940.81pathogenesis-related family protein [more]
AT1G78780.32.4e-3940.81pathogenesis-related family protein [more]
InterPro
Analysis Name: InterPro Annotations of Bitter gourd (TR) v1
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableGENE3D3.10.450.50coord: 133..260
e-value: 2.1E-6
score: 30.0
NoneNo IPR availablePANTHERPTHR31723PATHOGENESIS-RELATED FAMILY PROTEINcoord: 109..213
coord: 5..92
coord: 235..282
NoneNo IPR availablePANTHERPTHR31723:SF10PATHOGEN-RELATED PROTEIN-LIKEcoord: 109..213
coord: 5..92
coord: 235..282
IPR032710NTF2-like domain superfamilySUPERFAMILY54427NTF2-likecoord: 149..212

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
MS018049.1MS018049.1mRNA