Homology
BLAST of MS017941 vs. NCBI nr
Match:
XP_022155865.1 (U6 snRNA phosphodiesterase [Momordica charantia])
HSP 1 Score: 545.0 bits (1403), Expect = 3.7e-151
Identity = 279/283 (98.59%), Postives = 279/283 (98.59%), Query Frame = 0
Query: 1 MDALKASYRGSSSDEEDDIVSTAPPDLSPPPPPPPSLPPPPLSLLDFPNSISALHDLPNA 60
MDALKASYRGSSSDEEDDIVSTAP DLS PPPPPPSLPPPPLSLLDFPNSISALHDLP A
Sbjct: 1 MDALKASYRGSSSDEEDDIVSTAPSDLS-PPPPPPSLPPPPLSLLDFPNSISALHDLPIA 60
Query: 61 QPTRFRSFPHVEGNYALHVYIPVYIPTTSKKEVVLFLKKVSSLVPSLHLVDIDVPLTSLC 120
QPTRFRSFPHVEGNYALHVYIPVYIPTTSKKEVVLFLKKVSSLVPSLHLVDIDVPLTSLC
Sbjct: 61 QPTRFRSFPHVEGNYALHVYIPVYIPTTSKKEVVLFLKKVSSLVPSLHLVDIDVPLTSLC 120
Query: 121 KDEHKLEQALAREFHISLSRTVPIRVHQIDSIVSMLRQKLQCQRRYWIDFSKWETFVNDD 180
KDEHKLEQALAREFHISLSRTVPIRVHQIDSIVSMLRQKLQCQRRYWIDFSKWETFVNDD
Sbjct: 121 KDEHKLEQALAREFHISLSRTVPIRVHQIDSIVSMLRQKLQCQRRYWIDFSKWETFVNDD 180
Query: 181 LSRTFLSMEIIAGGLMEIRKQIQVVNEVYKLHNLPEFYKEERPHISLAWALGDLSKLLSR 240
LSRTFLSMEIIAGGLMEIRKQIQVVNEVYK HNLPEFYKEERPHISLAWALGDLSKLLSR
Sbjct: 181 LSRTFLSMEIIAGGLMEIRKQIQVVNEVYKFHNLPEFYKEERPHISLAWALGDLSKLLSR 240
Query: 241 VVDDKMKRSSMAPSKRCIFTTKFSGIECKIGKKTYKICKSPDE 284
VVDDKMKRSSMAPSKRCIFTTKFSGIECKIGKKTYKICKSPDE
Sbjct: 241 VVDDKMKRSSMAPSKRCIFTTKFSGIECKIGKKTYKICKSPDE 282
BLAST of MS017941 vs. NCBI nr
Match:
XP_023549871.1 (U6 snRNA phosphodiesterase [Cucurbita pepo subsp. pepo])
HSP 1 Score: 426.0 bits (1094), Expect = 2.5e-115
Identity = 226/293 (77.13%), Postives = 245/293 (83.62%), Query Frame = 0
Query: 1 MDALKASYRGSSSDEEDDIVSTAP---------PDLSPPPPPPPSLPPPPLSLLDFPNSI 60
M+AL ASY GSSSDE+ D VS + P LS LPPPPLSLLDFPNS
Sbjct: 1 MEALMASYGGSSSDEDVDTVSPSSASASASASLPQLSDETESFLPLPPPPLSLLDFPNST 60
Query: 61 SALHDLPNAQPTRFRSFPHVEGNYALHVYIPVYIPTTSKKEVVLFLKKVSSLVPSLHLVD 120
SAL DLP Q R RSFPHV+GNYA+H+YIPVYIPT ++KEV LFLKK+S LVP+LHLVD
Sbjct: 61 SALDDLPIGQAARVRSFPHVQGNYAVHLYIPVYIPTNARKEVALFLKKLSKLVPALHLVD 120
Query: 121 IDVPLTSLCKDEHKLEQALAREFHISLSRTVPIRVHQIDSIVSMLRQKLQCQRRYWIDFS 180
ID+PL LCKD+HKLEQALAREFHISLSRTVPIRVHQIDSIV+MLRQKLQ QRRYWIDFS
Sbjct: 121 IDIPLDILCKDDHKLEQALAREFHISLSRTVPIRVHQIDSIVTMLRQKLQSQRRYWIDFS 180
Query: 181 KWETFVNDDLSRTFLSMEIIAGGLMEIRKQIQVVNEVYKLHNLPEFYKEERPHISLAWAL 240
KWETFVNDDLSRTFLSMEIIAGGLMEIRK IQVVNEVYKLHNLPEFYKE RPHISLAWAL
Sbjct: 181 KWETFVNDDLSRTFLSMEIIAGGLMEIRKHIQVVNEVYKLHNLPEFYKEGRPHISLAWAL 240
Query: 241 GDLSKLLSRVVDDKMKRSSM-APSKRCIFTTKFSGIECKIGKKTYKICKSPDE 284
GDLSKLLS+ V D+MK+S + SKRCIFT KF+GIECKIGKK +KICK PDE
Sbjct: 241 GDLSKLLSQSVHDEMKKSMVKEKSKRCIFTAKFNGIECKIGKKMFKICKFPDE 293
BLAST of MS017941 vs. NCBI nr
Match:
XP_038875354.1 (U6 snRNA phosphodiesterase isoform X1 [Benincasa hispida])
HSP 1 Score: 425.2 bits (1092), Expect = 4.3e-115
Identity = 226/291 (77.66%), Postives = 242/291 (83.16%), Query Frame = 0
Query: 1 MDALKASYRGSSSDEEDDIV-------STAPPDLSPPPPPPPSLPPPPLSLLDFPNSISA 60
MDAL+ASY GSSSDEE D V S + P LS LPPP SLL FPNS S
Sbjct: 1 MDALRASYGGSSSDEEADTVSPSSASTSASTPQLSDETVSFLPLPPPSPSLLHFPNSTSI 60
Query: 61 LHDLPNAQPTRFRSFPHVEGNYALHVYIPVYIPTTSKKEVVLFLKKVSSLVPSLHLVDID 120
L DLP Q TR RSFPHV+GNYALH+YIPVY+PT +KEV LFLKKVSSLVP+LHLVDID
Sbjct: 61 LDDLPIDQATRVRSFPHVQGNYALHLYIPVYVPTNGRKEVALFLKKVSSLVPALHLVDID 120
Query: 121 VPLTSLCKDEHKLEQALAREFHISLSRTVPIRVHQIDSIVSMLRQKLQCQRRYWIDFSKW 180
VPL LCKD+HKLEQALAREFH+SLSRTVPIRVHQIDSIV+MLRQKLQ QRRYWIDFSKW
Sbjct: 121 VPLDVLCKDDHKLEQALAREFHVSLSRTVPIRVHQIDSIVTMLRQKLQSQRRYWIDFSKW 180
Query: 181 ETFVNDDLSRTFLSMEIIAGGLMEIRKQIQVVNEVYKLHNLPEFYKEERPHISLAWALGD 240
ETFVNDDLSRTFLSMEII GGLMEIRKQIQ+VNEVYKLHNLPEFYKE RPHISLAWA+GD
Sbjct: 181 ETFVNDDLSRTFLSMEIITGGLMEIRKQIQIVNEVYKLHNLPEFYKEARPHISLAWAIGD 240
Query: 241 LSKLLSRVVDDKMKRSS-MAPSKRCIFTTKFSGIECKIGKKTYKICKSPDE 284
LSKLLS+ V ++MK S+ M KRCIFTTKF GIECKIGKK YKICK PDE
Sbjct: 241 LSKLLSQAVHNEMKSSAVMQTLKRCIFTTKFKGIECKIGKKIYKICKFPDE 291
BLAST of MS017941 vs. NCBI nr
Match:
XP_008467330.1 (PREDICTED: U6 snRNA phosphodiesterase [Cucumis melo])
HSP 1 Score: 423.3 bits (1087), Expect = 1.6e-114
Identity = 221/289 (76.47%), Postives = 244/289 (84.43%), Query Frame = 0
Query: 1 MDALKASYRGSSSDEEDDIV-----STAPPDLSPPPPPPPSLPPPPLSLLDFPNSISALH 60
MDAL+ASY GSSSDEE D V ST+ P LPPPPLSLL+FPNS L
Sbjct: 1 MDALRASYGGSSSDEEVDTVSPSSASTSTPQFFDETVSSLPLPPPPLSLLNFPNSTCVLD 60
Query: 61 DLPNAQPTRFRSFPHVEGNYALHVYIPVYIPTTSKKEVVLFLKKVSSLVPSLHLVDIDVP 120
DLP Q TR RSFPHV+GNYALHVYIPVY+PT ++KEV LF+KK+SSLVP+LHLVDID+P
Sbjct: 61 DLPIDQATRVRSFPHVQGNYALHVYIPVYVPTNARKEVALFMKKISSLVPALHLVDIDIP 120
Query: 121 LTSLCKDEHKLEQALAREFHISLSRTVPIRVHQIDSIVSMLRQKLQCQRRYWIDFSKWET 180
L LCKD+HKLEQALAREFHISLSRTVPIRVHQIDSIV+MLRQKLQ RRYWIDFSKWET
Sbjct: 121 LDVLCKDDHKLEQALAREFHISLSRTVPIRVHQIDSIVTMLRQKLQSPRRYWIDFSKWET 180
Query: 181 FVNDDLSRTFLSMEIIAGGLMEIRKQIQVVNEVYKLHNLPEFYKEERPHISLAWALGDLS 240
FVNDDLSRTFLSMEII GGLMEIRKQIQVVNEVYKLHNLPEFYKE RPHISLAWALGD+S
Sbjct: 181 FVNDDLSRTFLSMEIITGGLMEIRKQIQVVNEVYKLHNLPEFYKEARPHISLAWALGDVS 240
Query: 241 KLLSRVVDDKMKRSSM-APSKRCIFTTKFSGIECKIGKKTYKICKSPDE 284
++ S+ V +++KRS++ P KRCIFTTKF+GIECKIGKK YKICK DE
Sbjct: 241 QISSQAVHNELKRSAVKEPFKRCIFTTKFNGIECKIGKKMYKICKFADE 289
BLAST of MS017941 vs. NCBI nr
Match:
XP_022969741.1 (U6 snRNA phosphodiesterase [Cucurbita maxima])
HSP 1 Score: 421.4 bits (1082), Expect = 6.2e-114
Identity = 225/297 (75.76%), Postives = 245/297 (82.49%), Query Frame = 0
Query: 1 MDALKASYRGSSSDEEDDIVSTAP-------------PDLSPPPPPPPSLPPPPLSLLDF 60
M+AL ASY GSSSDE+ D VS + P LS LPPPPLSLLDF
Sbjct: 1 MEALMASYGGSSSDEDADTVSPSSASASASASASASLPQLSDETESFLPLPPPPLSLLDF 60
Query: 61 PNSISALHDLPNAQPTRFRSFPHVEGNYALHVYIPVYIPTTSKKEVVLFLKKVSSLVPSL 120
PNS SAL DLP Q R RSFPHV+GNYA+H+YIPVYIPT ++KEV LFLKK+S LVP+L
Sbjct: 61 PNSTSALDDLPIGQAARVRSFPHVQGNYAVHLYIPVYIPTNARKEVALFLKKLSKLVPAL 120
Query: 121 HLVDIDVPLTSLCKDEHKLEQALAREFHISLSRTVPIRVHQIDSIVSMLRQKLQCQRRYW 180
HLVDID+PL LCKD+ KLEQALAREFHISLSRTVPIRVHQIDSIV+MLRQKLQ QRRYW
Sbjct: 121 HLVDIDIPLDILCKDDLKLEQALAREFHISLSRTVPIRVHQIDSIVTMLRQKLQSQRRYW 180
Query: 181 IDFSKWETFVNDDLSRTFLSMEIIAGGLMEIRKQIQVVNEVYKLHNLPEFYKEERPHISL 240
IDFSKWETFVNDDLSRTFLSMEIIAGGLMEIRK+IQVVNEVYKLHNLPEFYKE RPHISL
Sbjct: 181 IDFSKWETFVNDDLSRTFLSMEIIAGGLMEIRKRIQVVNEVYKLHNLPEFYKEARPHISL 240
Query: 241 AWALGDLSKLLSRVVDDKMKRSSM-APSKRCIFTTKFSGIECKIGKKTYKICKSPDE 284
AWALGDLSKLLS+ V D+MK+S + SKRCIFT KF+GIECKIGKK +KICK PDE
Sbjct: 241 AWALGDLSKLLSQSVHDEMKKSMVKEKSKRCIFTAKFNGIECKIGKKMFKICKFPDE 297
BLAST of MS017941 vs. ExPASy Swiss-Prot
Match:
Q7ZYI9 (U6 snRNA phosphodiesterase OS=Xenopus laevis OX=8355 GN=usb1 PE=2 SV=1)
HSP 1 Score: 93.2 bits (230), Expect = 5.1e-18
Identity = 82/277 (29.60%), Postives = 127/277 (45.85%), Query Frame = 0
Query: 12 SSDEEDDIVSTAPPDLSPPPPPPPSLPPPPLSLLDFPNSISALHDLP--NAQPTRFRSFP 71
SS EED+ ++ PP PP PPP+ ++L + DL R RSF
Sbjct: 7 SSSEEDEGETSEPPGRRLPPLPPPT------TVLRMFQDMEGDEDLDENTKHEGRIRSFK 66
Query: 72 HVEGNYALHVYIPVYIPTTSKKEVVLFLKKVSSLVPSLHLVDIDVPLTSLCKDEHKLEQA 131
H GN+A +VYIP P +D+ L S+ + L
Sbjct: 67 HERGNWATYVYIP--------------------FQPQEEFLDLLDELVSVAAENGVLLTK 126
Query: 132 LAREFHISLSRTVPIRVHQIDSIVSMLRQKLQCQRRYWIDFSKWETFVNDDLSRTFLSME 191
++ EFHIS S+TV +R H I+ V L+ KL C R+ + + + N + +RTFL +E
Sbjct: 127 MS-EFHISQSQTVVLRHHWINPFVESLKDKLHCMYRFLCIAERIKVYTNQEKTRTFLGLE 186
Query: 192 IIAGGLMEIRKQIQVVNEVYKLHNLPEFYKEERPHISLAWALGDLSKLLSRVVDDKMKRS 251
++ G+ + + + V+ + NL FY+E H+SLAW +GD +K+K S
Sbjct: 187 -VSVGMEHLLEVVSEVDRSLQEFNLQTFYQEPSFHVSLAWCVGDKY--------EKLKGS 246
Query: 252 SMAPSKRCI-------FTTKFSG--IECKIGKKTYKI 278
+ ++ I T+F+ I CK G KT+ I
Sbjct: 247 CLLELQKVIDRFEDSDTLTRFNAEEIRCKAGNKTFCI 247
BLAST of MS017941 vs. ExPASy Swiss-Prot
Match:
Q6DEF6 (U6 snRNA phosphodiesterase OS=Danio rerio OX=7955 GN=usb1 PE=2 SV=1)
HSP 1 Score: 87.0 bits (214), Expect = 3.6e-16
Identity = 69/208 (33.17%), Postives = 103/208 (49.52%), Query Frame = 0
Query: 35 PSLPPPPLSLLDFPNSISALHDLPNAQPTRFRSFPHVEGNYALHVYIPVYIPTTSKKEVV 94
P LP P F +S D R RSF H GN+A +V+ P Y P + EV
Sbjct: 52 PRLPLPESVKEMFRDSEELWTDKSEEHGGRLRSFQHERGNWATYVFFP-YDPEEAFLEV- 111
Query: 95 LFLKKVSSLVPSLHLVDIDVPLTSLCKDEHKLEQALAREFHISLSRTVPIRVHQIDSIVS 154
L K+ + + D+PLT ++ EFH+SLS+TV +R H I V
Sbjct: 112 --LNKMMAAAEA-----HDIPLT------------VSEEFHLSLSKTVVLRHHWIQPFVQ 171
Query: 155 MLRQKLQCQRRYWIDFSKWETFVNDDLSRTFLSMEIIAG--GLMEIRKQIQVVNEVYKLH 214
+R L ++++ K + + N + +RTFL ME+ G L+E+ K +V+E K
Sbjct: 172 SIRTSLTHFQKFYCVAYKLKVYSNAEKTRTFLGMEVSTGTPHLLELSK---IVDETMKEF 231
Query: 215 NLPEFYKEERPHISLAWALGDLSKLLSR 241
NL FY++ HISLAW +GD ++ L +
Sbjct: 232 NLSTFYEDPSFHISLAWCVGDQTERLKK 235
BLAST of MS017941 vs. ExPASy Swiss-Prot
Match:
Q91W78 (U6 snRNA phosphodiesterase OS=Mus musculus OX=10090 GN=Usb1 PE=2 SV=1)
HSP 1 Score: 84.3 bits (207), Expect = 2.3e-15
Identity = 74/280 (26.43%), Postives = 120/280 (42.86%), Query Frame = 0
Query: 11 SSSDEEDDIVSTAPPDLSP---------PPPPPPSLPPPPLSLLDFPNSISALHDLPNAQ 70
SSS ED+ + A P P P LP P L FP++ D
Sbjct: 10 SSSGSEDEAEAVAAGRSKPGTGFHRCGQNPVPSEKLPVPDSVLSMFPSTEEGPEDDSAKH 69
Query: 71 PTRFRSFPHVEGNYALHVYIPVYIPTTSKKEVVLFLKKVSSLVPSLHLVDIDVPLTSLCK 130
R R+FPH GN+A H+YIP + + L + VP L L++
Sbjct: 70 GGRIRTFPHERGNWATHIYIPYEAKEDFRDLLDALLPRAQMFVPRLVLME---------- 129
Query: 131 DEHKLEQALAREFHISLSRTVPIRVHQIDSIVSMLRQKLQCQRRYWIDFSKWETFVNDDL 190
EFH+SLS++V +R H I V +L+ ++ +R++ ++ + + N +
Sbjct: 130 -----------EFHVSLSQSVVLRHHWILPFVQVLKDRMASFQRFFFTANRVKIYTNQEK 189
Query: 191 SRTFLSMEIIAGGLMEIRKQIQVVNEVYKLHNLPEFYKEERPHISLAWALGD-------- 250
+RTF+ +E ++ G + + V+ K +L FY++ HISLAW +GD
Sbjct: 190 TRTFIGLE-VSSGHAQFLDLVSEVDRAMKEFDLTTFYQDPSFHISLAWCVGDASLQLEGQ 249
Query: 251 ----LSKLLSRVVDDKMKRSSMAPSKRCIFTTKFSGIECK 270
L +++ D +M +A RC KF + K
Sbjct: 250 CLQELQEIVDEFEDSEMLLRVLANQVRCKSGNKFFSMPLK 267
BLAST of MS017941 vs. ExPASy Swiss-Prot
Match:
Q5I0I5 (U6 snRNA phosphodiesterase OS=Rattus norvegicus OX=10116 GN=Usb1 PE=2 SV=1)
HSP 1 Score: 79.7 bits (195), Expect = 5.8e-14
Identity = 71/280 (25.36%), Postives = 119/280 (42.50%), Query Frame = 0
Query: 11 SSSDEEDDIVSTAPPDLSP---------PPPPPPSLPPPPLSLLDFPNSISALHDLPNAQ 70
SSS ED+ + A P P P P P L FP++ D
Sbjct: 10 SSSGSEDEAEAVAAGRSKPGSGLHRCGQNPLPSQRFPVPDSVLNMFPSTEEGPEDDSARH 69
Query: 71 PTRFRSFPHVEGNYALHVYIPVYIPTTSKKEVVLFLKKVSSLVPSLHLVDIDVPLTSLCK 130
R R+FPH GN+A H+YIP + + + L + P L ++
Sbjct: 70 GGRIRTFPHERGNWATHIYIPYEANEEFQDLLDVLLPRAQMFAPRLVQME---------- 129
Query: 131 DEHKLEQALAREFHISLSRTVPIRVHQIDSIVSMLRQKLQCQRRYWIDFSKWETFVNDDL 190
EFH+SLS++V +R H I V +L+ ++ +R++ ++ + + N +
Sbjct: 130 -----------EFHLSLSQSVVLRHHWILPFVQVLKDRMASFQRFFFTANRVKIYTNQEK 189
Query: 191 SRTFLSMEIIAGGLMEIRKQIQVVNEVYKLHNLPEFYKEERPHISLAWALGD-------- 250
+RTF+ +E ++ G + + V+ V K +L FY++ H+SLAW +GD
Sbjct: 190 TRTFIGLE-VSSGHAQFLDMVSEVDRVMKEFDLTTFYQDPSFHVSLAWCVGDARLQLEGQ 249
Query: 251 ----LSKLLSRVVDDKMKRSSMAPSKRCIFTTKFSGIECK 270
L +++ D +M +A RC KF + K
Sbjct: 250 CQQELQEIVDEFEDSEMLLRVLAEQVRCKSGNKFFSMPLK 267
BLAST of MS017941 vs. ExPASy Swiss-Prot
Match:
Q9BQ65 (U6 snRNA phosphodiesterase OS=Homo sapiens OX=9606 GN=USB1 PE=1 SV=1)
HSP 1 Score: 76.3 bits (186), Expect = 6.4e-13
Identity = 63/226 (27.88%), Postives = 101/226 (44.69%), Query Frame = 0
Query: 12 SSDEEDDIVSTAPPDLS----PPPPPPPSLPPPPLSLLDFPNSISALHDLPNAQPTRFRS 71
S DE +D + T P D S P P P P L FP + D R R+
Sbjct: 14 SEDESEDGMRTRPGDGSHRRGQSPLPRQRFPVPDSVLNMFPGTEEGPEDDSTKHGGRVRT 73
Query: 72 FPHVEGNYALHVYIPVYIPTTSKKEVVLFLKKVSSLVPSLHLVDIDVPLTSLCKDEHKLE 131
FPH GN+A HVY+P + + L + VP L + +
Sbjct: 74 FPHERGNWATHVYVPYEAKEEFLDLLDVLLPHAQTYVPRLVRMKV--------------- 133
Query: 132 QALAREFHISLSRTVPIRVHQIDSIVSMLRQKLQCQRRYWIDFSKWETFVNDDLSRTFLS 191
FH+SLS++V +R H I V L+ ++ R++ ++ + + N + +RTF+
Sbjct: 134 ------FHLSLSQSVVLRHHWILPFVQALKARMTSFHRFFFTANQVKIYTNQEKTRTFIG 193
Query: 192 MEIIAGGLMEIRKQIQVVNEVYKLHNLPEFYKEERPHISLAWALGD 234
+E+ +G + + V+ V + NL FY++ H+SLAW +GD
Sbjct: 194 LEVTSGH-AQFLDLVSEVDRVMEEFNLTTFYQDPSFHLSLAWCVGD 217
BLAST of MS017941 vs. ExPASy TrEMBL
Match:
A0A6J1DNL4 (U6 snRNA phosphodiesterase OS=Momordica charantia OX=3673 GN=LOC111022878 PE=3 SV=1)
HSP 1 Score: 545.0 bits (1403), Expect = 1.8e-151
Identity = 279/283 (98.59%), Postives = 279/283 (98.59%), Query Frame = 0
Query: 1 MDALKASYRGSSSDEEDDIVSTAPPDLSPPPPPPPSLPPPPLSLLDFPNSISALHDLPNA 60
MDALKASYRGSSSDEEDDIVSTAP DLS PPPPPPSLPPPPLSLLDFPNSISALHDLP A
Sbjct: 1 MDALKASYRGSSSDEEDDIVSTAPSDLS-PPPPPPSLPPPPLSLLDFPNSISALHDLPIA 60
Query: 61 QPTRFRSFPHVEGNYALHVYIPVYIPTTSKKEVVLFLKKVSSLVPSLHLVDIDVPLTSLC 120
QPTRFRSFPHVEGNYALHVYIPVYIPTTSKKEVVLFLKKVSSLVPSLHLVDIDVPLTSLC
Sbjct: 61 QPTRFRSFPHVEGNYALHVYIPVYIPTTSKKEVVLFLKKVSSLVPSLHLVDIDVPLTSLC 120
Query: 121 KDEHKLEQALAREFHISLSRTVPIRVHQIDSIVSMLRQKLQCQRRYWIDFSKWETFVNDD 180
KDEHKLEQALAREFHISLSRTVPIRVHQIDSIVSMLRQKLQCQRRYWIDFSKWETFVNDD
Sbjct: 121 KDEHKLEQALAREFHISLSRTVPIRVHQIDSIVSMLRQKLQCQRRYWIDFSKWETFVNDD 180
Query: 181 LSRTFLSMEIIAGGLMEIRKQIQVVNEVYKLHNLPEFYKEERPHISLAWALGDLSKLLSR 240
LSRTFLSMEIIAGGLMEIRKQIQVVNEVYK HNLPEFYKEERPHISLAWALGDLSKLLSR
Sbjct: 181 LSRTFLSMEIIAGGLMEIRKQIQVVNEVYKFHNLPEFYKEERPHISLAWALGDLSKLLSR 240
Query: 241 VVDDKMKRSSMAPSKRCIFTTKFSGIECKIGKKTYKICKSPDE 284
VVDDKMKRSSMAPSKRCIFTTKFSGIECKIGKKTYKICKSPDE
Sbjct: 241 VVDDKMKRSSMAPSKRCIFTTKFSGIECKIGKKTYKICKSPDE 282
BLAST of MS017941 vs. ExPASy TrEMBL
Match:
A0A1S3CTB0 (U6 snRNA phosphodiesterase OS=Cucumis melo OX=3656 GN=LOC103504707 PE=3 SV=1)
HSP 1 Score: 423.3 bits (1087), Expect = 7.9e-115
Identity = 221/289 (76.47%), Postives = 244/289 (84.43%), Query Frame = 0
Query: 1 MDALKASYRGSSSDEEDDIV-----STAPPDLSPPPPPPPSLPPPPLSLLDFPNSISALH 60
MDAL+ASY GSSSDEE D V ST+ P LPPPPLSLL+FPNS L
Sbjct: 1 MDALRASYGGSSSDEEVDTVSPSSASTSTPQFFDETVSSLPLPPPPLSLLNFPNSTCVLD 60
Query: 61 DLPNAQPTRFRSFPHVEGNYALHVYIPVYIPTTSKKEVVLFLKKVSSLVPSLHLVDIDVP 120
DLP Q TR RSFPHV+GNYALHVYIPVY+PT ++KEV LF+KK+SSLVP+LHLVDID+P
Sbjct: 61 DLPIDQATRVRSFPHVQGNYALHVYIPVYVPTNARKEVALFMKKISSLVPALHLVDIDIP 120
Query: 121 LTSLCKDEHKLEQALAREFHISLSRTVPIRVHQIDSIVSMLRQKLQCQRRYWIDFSKWET 180
L LCKD+HKLEQALAREFHISLSRTVPIRVHQIDSIV+MLRQKLQ RRYWIDFSKWET
Sbjct: 121 LDVLCKDDHKLEQALAREFHISLSRTVPIRVHQIDSIVTMLRQKLQSPRRYWIDFSKWET 180
Query: 181 FVNDDLSRTFLSMEIIAGGLMEIRKQIQVVNEVYKLHNLPEFYKEERPHISLAWALGDLS 240
FVNDDLSRTFLSMEII GGLMEIRKQIQVVNEVYKLHNLPEFYKE RPHISLAWALGD+S
Sbjct: 181 FVNDDLSRTFLSMEIITGGLMEIRKQIQVVNEVYKLHNLPEFYKEARPHISLAWALGDVS 240
Query: 241 KLLSRVVDDKMKRSSM-APSKRCIFTTKFSGIECKIGKKTYKICKSPDE 284
++ S+ V +++KRS++ P KRCIFTTKF+GIECKIGKK YKICK DE
Sbjct: 241 QISSQAVHNELKRSAVKEPFKRCIFTTKFNGIECKIGKKMYKICKFADE 289
BLAST of MS017941 vs. ExPASy TrEMBL
Match:
A0A6J1HYN3 (U6 snRNA phosphodiesterase OS=Cucurbita maxima OX=3661 GN=LOC111468846 PE=3 SV=1)
HSP 1 Score: 421.4 bits (1082), Expect = 3.0e-114
Identity = 225/297 (75.76%), Postives = 245/297 (82.49%), Query Frame = 0
Query: 1 MDALKASYRGSSSDEEDDIVSTAP-------------PDLSPPPPPPPSLPPPPLSLLDF 60
M+AL ASY GSSSDE+ D VS + P LS LPPPPLSLLDF
Sbjct: 1 MEALMASYGGSSSDEDADTVSPSSASASASASASASLPQLSDETESFLPLPPPPLSLLDF 60
Query: 61 PNSISALHDLPNAQPTRFRSFPHVEGNYALHVYIPVYIPTTSKKEVVLFLKKVSSLVPSL 120
PNS SAL DLP Q R RSFPHV+GNYA+H+YIPVYIPT ++KEV LFLKK+S LVP+L
Sbjct: 61 PNSTSALDDLPIGQAARVRSFPHVQGNYAVHLYIPVYIPTNARKEVALFLKKLSKLVPAL 120
Query: 121 HLVDIDVPLTSLCKDEHKLEQALAREFHISLSRTVPIRVHQIDSIVSMLRQKLQCQRRYW 180
HLVDID+PL LCKD+ KLEQALAREFHISLSRTVPIRVHQIDSIV+MLRQKLQ QRRYW
Sbjct: 121 HLVDIDIPLDILCKDDLKLEQALAREFHISLSRTVPIRVHQIDSIVTMLRQKLQSQRRYW 180
Query: 181 IDFSKWETFVNDDLSRTFLSMEIIAGGLMEIRKQIQVVNEVYKLHNLPEFYKEERPHISL 240
IDFSKWETFVNDDLSRTFLSMEIIAGGLMEIRK+IQVVNEVYKLHNLPEFYKE RPHISL
Sbjct: 181 IDFSKWETFVNDDLSRTFLSMEIIAGGLMEIRKRIQVVNEVYKLHNLPEFYKEARPHISL 240
Query: 241 AWALGDLSKLLSRVVDDKMKRSSM-APSKRCIFTTKFSGIECKIGKKTYKICKSPDE 284
AWALGDLSKLLS+ V D+MK+S + SKRCIFT KF+GIECKIGKK +KICK PDE
Sbjct: 241 AWALGDLSKLLSQSVHDEMKKSMVKEKSKRCIFTAKFNGIECKIGKKMFKICKFPDE 297
BLAST of MS017941 vs. ExPASy TrEMBL
Match:
A0A6J1EQH7 (U6 snRNA phosphodiesterase OS=Cucurbita moschata OX=3662 GN=LOC111435686 PE=3 SV=1)
HSP 1 Score: 421.0 bits (1081), Expect = 3.9e-114
Identity = 225/291 (77.32%), Postives = 243/291 (83.51%), Query Frame = 0
Query: 1 MDALKASYRGSSSDEEDDIVSTAP-------PDLSPPPPPPPSLPPPPLSLLDFPNSISA 60
M+AL ASY GSSSDE+ D VS + P LS LPPPPLSLLDFPNS SA
Sbjct: 1 MEALMASYGGSSSDEDVDTVSPSSASASASLPQLSDETESFLPLPPPPLSLLDFPNSTSA 60
Query: 61 LHDLPNAQPTRFRSFPHVEGNYALHVYIPVYIPTTSKKEVVLFLKKVSSLVPSLHLVDID 120
L DLP Q R RSFPHV+GNYALH+YIPVYI T ++KEV LFLKK+S LVP+LHLVDID
Sbjct: 61 LDDLPIGQAARVRSFPHVQGNYALHLYIPVYITTNARKEVALFLKKLSKLVPALHLVDID 120
Query: 121 VPLTSLCKDEHKLEQALAREFHISLSRTVPIRVHQIDSIVSMLRQKLQCQRRYWIDFSKW 180
+PL LCKD+HKLEQALAREFHISLSRTVPIRVHQIDSIV+MLRQKLQ QRRYWIDFSKW
Sbjct: 121 IPLDILCKDDHKLEQALAREFHISLSRTVPIRVHQIDSIVTMLRQKLQSQRRYWIDFSKW 180
Query: 181 ETFVNDDLSRTFLSMEIIAGGLMEIRKQIQVVNEVYKLHNLPEFYKEERPHISLAWALGD 240
ETFVNDDLSRTFLSMEIIAGGLMEIRK IQVVNEVYKLHNLPEFYKE RPHISLAWALGD
Sbjct: 181 ETFVNDDLSRTFLSMEIIAGGLMEIRKHIQVVNEVYKLHNLPEFYKEGRPHISLAWALGD 240
Query: 241 LSKLLSRVVDDKMKRSSM-APSKRCIFTTKFSGIECKIGKKTYKICKSPDE 284
LSKLLS+ V D+MK+S + SKR IFT KF+GIECKIGKK +KICK PDE
Sbjct: 241 LSKLLSQSVHDEMKKSMVKEKSKRSIFTAKFNGIECKIGKKMFKICKFPDE 291
BLAST of MS017941 vs. ExPASy TrEMBL
Match:
A0A0A0KPH5 (U6 snRNA phosphodiesterase OS=Cucumis sativus OX=3659 GN=Csa_5G167730 PE=3 SV=1)
HSP 1 Score: 419.9 bits (1078), Expect = 8.7e-114
Identity = 222/291 (76.29%), Postives = 244/291 (83.85%), Query Frame = 0
Query: 1 MDALKASYRGSSSDEEDDIVSTAPPDLSPPPPPPPS-------LPPPPLSLLDFPNSISA 60
MDAL+ASY GSSSDEE D VS PP S P LPPPPLSLL+FPNS
Sbjct: 1 MDALRASYGGSSSDEEVDTVS--PPSASTSAPQFLDETVTFLPLPPPPLSLLNFPNSTCV 60
Query: 61 LHDLPNAQPTRFRSFPHVEGNYALHVYIPVYIPTTSKKEVVLFLKKVSSLVPSLHLVDID 120
L DLP Q TR RSFPHV+GNYALHVYIPVY+PT ++KEV LF+KK+SSLVP+LHLVDID
Sbjct: 61 LDDLPIDQATRVRSFPHVQGNYALHVYIPVYVPTNARKEVALFMKKISSLVPALHLVDID 120
Query: 121 VPLTSLCKDEHKLEQALAREFHISLSRTVPIRVHQIDSIVSMLRQKLQCQRRYWIDFSKW 180
+PL LCKD+ KLEQA AREFHISLSRTVPIRVHQIDSIV+MLRQKLQ RRYWIDFSKW
Sbjct: 121 IPLDVLCKDDQKLEQAWAREFHISLSRTVPIRVHQIDSIVTMLRQKLQSPRRYWIDFSKW 180
Query: 181 ETFVNDDLSRTFLSMEIIAGGLMEIRKQIQVVNEVYKLHNLPEFYKEERPHISLAWALGD 240
ETFVNDDLSRTFLSMEII GGLMEIRKQIQVVNEVYKLHNLPEFYKE RPHIS+AWALGD
Sbjct: 181 ETFVNDDLSRTFLSMEIITGGLMEIRKQIQVVNEVYKLHNLPEFYKEARPHISVAWALGD 240
Query: 241 LSKLLSRVVDDKMKRSSM-APSKRCIFTTKFSGIECKIGKKTYKICKSPDE 284
+S+L S+ V +++KRS++ P KRCIFTTKF+GIECKIGKK YKICK PDE
Sbjct: 241 VSQLSSQAVHNELKRSAVKEPFKRCIFTTKFNGIECKIGKKMYKICKFPDE 289
BLAST of MS017941 vs. TAIR 10
Match:
AT5G51170.1 (unknown protein; CONTAINS InterPro DOMAIN/s: Uncharacterised protein family UPF0406 (InterPro:IPR019146); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). )
HSP 1 Score: 323.2 bits (827), Expect = 2.1e-88
Identity = 172/285 (60.35%), Postives = 208/285 (72.98%), Query Frame = 0
Query: 1 MDALKASYRGSSSDEE-DDIVSTAPPDLSPPPPPPPSLPPPPLSLLDFPNSISALHDLPN 60
M+AL+ASY SSSD + DD+ +P + SLPPPPL+LLD S +L
Sbjct: 1 MEALRASYGDSSSDSDTDDLSPASPVTANSGEKDSISLPPPPLALLDSIVSTGSLDFFST 60
Query: 61 AQPTRFRSFPHVEGNYALHVYIPVYIPTTSKKEVVLFLKKVSSLVPSLHLVDIDVPLTSL 120
R R+FPHV+GNYALHVY+PV IP KKE+V FLKKV+S+VP LHLV+ DVPL+ L
Sbjct: 61 EPGVRVRNFPHVDGNYALHVYVPVCIPPLPKKEIVCFLKKVASVVPHLHLVEADVPLSIL 120
Query: 121 CKDEHKLEQALAREFHISLSRTVPIRVHQIDSIVSMLRQKLQCQRRYWIDFSKWETFVND 180
CKD+ K E+AL REFHISL R VP+RVHQI+S++SMLRQKLQ Q+RY IDF+KWE FVND
Sbjct: 121 CKDDQKFERALGREFHISLGRNVPLRVHQINSVISMLRQKLQLQKRYLIDFNKWEVFVND 180
Query: 181 DLSRTFLSMEIIAGGLMEIRKQIQVVNEVYKLHNLPEFYKEERPHISLAWALGDLSKLLS 240
D +R+FLS+EI GL EI KQI VNEVYKLHNLPEFYK+ RPHISL WALGD+ L
Sbjct: 181 DHTRSFLSLEITTSGLSEISKQIDAVNEVYKLHNLPEFYKDPRPHISLVWALGDIRTSLK 240
Query: 241 RVVDDKMKRSSMAPS-KRCIFTTKFSGIECKIGKKTYKICKSPDE 284
VD ++++ + IFT+KF GIECKIG KT+KICK PDE
Sbjct: 241 GAVDVELRKLRAGGCVQNRIFTSKFCGIECKIGNKTHKICKLPDE 285
BLAST of MS017941 vs. TAIR 10
Match:
AT5G51170.2 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Uncharacterised protein family UPF0406 (InterPro:IPR019146); Has 166 Blast hits to 166 proteins in 77 species: Archae - 0; Bacteria - 0; Metazoa - 100; Fungi - 19; Plants - 35; Viruses - 0; Other Eukaryotes - 12 (source: NCBI BLink). )
HSP 1 Score: 219.9 bits (559), Expect = 2.5e-57
Identity = 118/206 (57.28%), Postives = 150/206 (72.82%), Query Frame = 0
Query: 1 MDALKASYRGSSSDEE-DDIVSTAPPDLSPPPPPPPSLPPPPLSLLDFPNSISALHDLPN 60
M+AL+ASY SSSD + DD+ +P + SLPPPPL+LLD S +L
Sbjct: 1 MEALRASYGDSSSDSDTDDLSPASPVTANSGEKDSISLPPPPLALLDSIVSTGSLDFFST 60
Query: 61 AQPTRFRSFPHVEGNYALHVYIPVYIPTTSKKEVVLFLKKVSSLVPSLHLVDIDVPLTSL 120
R R+FPHV+GNYALHVY+PV IP KKE+V FLKKV+S+VP LHLV+ DVPL+ L
Sbjct: 61 EPGVRVRNFPHVDGNYALHVYVPVCIPPLPKKEIVCFLKKVASVVPHLHLVEADVPLSIL 120
Query: 121 CKDEHKLEQALAREFHISLSRTVPIRVHQIDSIVSMLRQKLQCQRRYWIDFSKWETFVND 180
CKD+ K E+AL REFHISL R VP+RVHQI+S++SMLRQKLQ Q+RY IDF+KWE FVND
Sbjct: 121 CKDDQKFERALGREFHISLGRNVPLRVHQINSVISMLRQKLQLQKRYLIDFNKWEVFVND 180
Query: 181 DLSRTFLSMEIIAGGLMEIRKQIQVV 206
D +R+FLS+EI GL E+ ++ ++
Sbjct: 181 DHTRSFLSLEITTSGLSEVLSKLMLL 206
The following BLAST results are available for this feature:
Match Name | E-value | Identity | Description | |
Q7ZYI9 | 5.1e-18 | 29.60 | U6 snRNA phosphodiesterase OS=Xenopus laevis OX=8355 GN=usb1 PE=2 SV=1 | [more] |
Q6DEF6 | 3.6e-16 | 33.17 | U6 snRNA phosphodiesterase OS=Danio rerio OX=7955 GN=usb1 PE=2 SV=1 | [more] |
Q91W78 | 2.3e-15 | 26.43 | U6 snRNA phosphodiesterase OS=Mus musculus OX=10090 GN=Usb1 PE=2 SV=1 | [more] |
Q5I0I5 | 5.8e-14 | 25.36 | U6 snRNA phosphodiesterase OS=Rattus norvegicus OX=10116 GN=Usb1 PE=2 SV=1 | [more] |
Q9BQ65 | 6.4e-13 | 27.88 | U6 snRNA phosphodiesterase OS=Homo sapiens OX=9606 GN=USB1 PE=1 SV=1 | [more] |
Match Name | E-value | Identity | Description | |
A0A6J1DNL4 | 1.8e-151 | 98.59 | U6 snRNA phosphodiesterase OS=Momordica charantia OX=3673 GN=LOC111022878 PE=3 S... | [more] |
A0A1S3CTB0 | 7.9e-115 | 76.47 | U6 snRNA phosphodiesterase OS=Cucumis melo OX=3656 GN=LOC103504707 PE=3 SV=1 | [more] |
A0A6J1HYN3 | 3.0e-114 | 75.76 | U6 snRNA phosphodiesterase OS=Cucurbita maxima OX=3661 GN=LOC111468846 PE=3 SV=1 | [more] |
A0A6J1EQH7 | 3.9e-114 | 77.32 | U6 snRNA phosphodiesterase OS=Cucurbita moschata OX=3662 GN=LOC111435686 PE=3 SV... | [more] |
A0A0A0KPH5 | 8.7e-114 | 76.29 | U6 snRNA phosphodiesterase OS=Cucumis sativus OX=3659 GN=Csa_5G167730 PE=3 SV=1 | [more] |
Match Name | E-value | Identity | Description | |
AT5G51170.1 | 2.1e-88 | 60.35 | unknown protein; CONTAINS InterPro DOMAIN/s: Uncharacterised protein family UPF0... | [more] |
AT5G51170.2 | 2.5e-57 | 57.28 | unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic... | [more] |