MS017873 (gene) Bitter gourd (TR) v1

Overview


Name	MS017873
Type	gene
Organism	Momordica charantia cv. TR (Bitter gourd (TR) v1)
Description	Expansin
Location	scaffold373: 3376115 .. 3377739 (-)
RNA-Seq Expression	MS017873
Synteny	MS017873

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCTTCTTTCTCAGGCTCATGGCTCTTCAACTTCTTGCTGGTTGCATTCATTTTCGCGGTCGTTAGCGGATCAGCGGTGGCCGTGTTCCAGCCAAGCCCGTGGAAGCTCGCTCACGCCACCTTCTATGGCGACGAAACTGCCTCCGAGACCATGGGTATGGAATGATCGATTGGGTTAAATTCTTATTTTGATCTTTGACATTTTTACCATTTTTATTTATTTTGATTCGTGCACTTTCAAAAAATATATTTATAATATTTTAGTGGTAAAGTTAAGAGATTTAGTGGTGGATCTTTTGGAGATGGTAATAGGTACCGGATCGGCAAACAAAAGTAGTTTGATACCAATAAAACTTGGTAATATGTCTACTTGTAATCTAAATGATAAAGTTTCGTCTCTCTTTTTTTTAATACAAAACTAAAATAGATATTTTAGAGGTTAAGACTCACTTTTAATCCACGTACTTTTATTGAAGTAACGATGTAATCTCTTAACTTTAGTTTGTGACAATTTAGTCCATATATTCTCAAACTTGTAATAATTTAATCTCTTATAAACTTTAGTATATAACAATTTAGTTAGTATTTTTAGTTTAAAATTAGTAACGATTTAATTCCTATAATGAAAAATGTTGCTAAAATTTTGAATGAAGTTTTTTATATATGTAAGTCATCATGTAGGTCAATAAAATGATGAGTGAGCTTATAAATCACAAAGTTACCTAATAAAATTCAATACTTAATTTTAATGAGATTTTTTATAGTACAACTAAATTGTTACCGATTTGAAACTACTTTCGACCGTAAATGTTTTTTAGAATTTGGATTGAAAATAGGTCCAAATTGATTTTCAAAGCAATTTCTTCAACACGCTAAAGATGAAACTTTTTCTTTTGGTTTTTGGCAGGTGGGGCTTGTGGATATGGAAATTTGTTTGTGAATGGCTACGGAACAGACACAGCCGCGTTGAGCTCTACACTTTTCAACAATGGCTATGCTTGCGGGACTTGCTTTCAGATCAAATGCGTGCAGTCGAAGGCGTGCTACGCAAACGTCGCGTTTACCACCGTGACAGCCACCAACCTCTGCCCGCCGAACTGGTCGCAGGACTCCAACGCGGGCGGCTGGTGCAACCCACCAAGGGTTCACTTCGACATGGCCAAGCCCGCCTTCATGAAGATCGCCGAGTGGAAAGCTGGGATCGTCCCCGTCCAATACCGCAGGTACACAAACATTACCATTACAACATGAAAAAAAACATTCTAAAGACCCATTTGGTAACGTTTCCGTTTCTTATTTCCCGTTTCTTACAGGGTGCCGTGTGTGAGAAAAGGAGGAGTTCGGTTCAGCCTGCAAGGAAACGGGTACTGGCTATTGGTGTACGTGATGAACGTGGGAGGAGGGGGCGATGTGTATTCAATGGCTGTGAAAGGAAGCAAAACGGGATGGATAAACATGAGCCATAACTGGGGAGCTTCGTATCAAGCTTTTGCCTCTTTGGGTGGCCAATGCCTTTCTTTCAAGATCACTTCATTCACAACTAAAGAGACCATTACTCTGTGGAATGTCATTCCTTCCAATTGGCAAGTTGGGTTGTCCTATAATTCCAATTTCAACTTCCAT

mRNA sequence

ATGGCTTCTTTCTCAGGCTCATGGCTCTTCAACTTCTTGCTGGTTGCATTCATTTTCGCGGTCGTTAGCGGATCAGCGGTGGCCGTGTTCCAGCCAAGCCCGTGGAAGCTCGCTCACGCCACCTTCTATGGCGACGAAACTGCCTCCGAGACCATGGGTGGGGCTTGTGGATATGGAAATTTGTTTGTGAATGGCTACGGAACAGACACAGCCGCGTTGAGCTCTACACTTTTCAACAATGGCTATGCTTGCGGGACTTGCTTTCAGATCAAATGCGTGCAGTCGAAGGCGTGCTACGCAAACGTCGCGTTTACCACCGTGACAGCCACCAACCTCTGCCCGCCGAACTGGTCGCAGGACTCCAACGCGGGCGGCTGGTGCAACCCACCAAGGGTTCACTTCGACATGGCCAAGCCCGCCTTCATGAAGATCGCCGAGTGGAAAGCTGGGATCGTCCCCGTCCAATACCGCAGGGTGCCGTGTGTGAGAAAAGGAGGAGTTCGGTTCAGCCTGCAAGGAAACGGGTACTGGCTATTGGTGTACGTGATGAACGTGGGAGGAGGGGGCGATGTGTATTCAATGGCTGTGAAAGGAAGCAAAACGGGATGGATAAACATGAGCCATAACTGGGGAGCTTCGTATCAAGCTTTTGCCTCTTTGGGTGGCCAATGCCTTTCTTTCAAGATCACTTCATTCACAACTAAAGAGACCATTACTCTGTGGAATGTCATTCCTTCCAATTGGCAAGTTGGGTTGTCCTATAATTCCAATTTCAACTTCCAT

Coding sequence (CDS)

ATGGCTTCTTTCTCAGGCTCATGGCTCTTCAACTTCTTGCTGGTTGCATTCATTTTCGCGGTCGTTAGCGGATCAGCGGTGGCCGTGTTCCAGCCAAGCCCGTGGAAGCTCGCTCACGCCACCTTCTATGGCGACGAAACTGCCTCCGAGACCATGGGTGGGGCTTGTGGATATGGAAATTTGTTTGTGAATGGCTACGGAACAGACACAGCCGCGTTGAGCTCTACACTTTTCAACAATGGCTATGCTTGCGGGACTTGCTTTCAGATCAAATGCGTGCAGTCGAAGGCGTGCTACGCAAACGTCGCGTTTACCACCGTGACAGCCACCAACCTCTGCCCGCCGAACTGGTCGCAGGACTCCAACGCGGGCGGCTGGTGCAACCCACCAAGGGTTCACTTCGACATGGCCAAGCCCGCCTTCATGAAGATCGCCGAGTGGAAAGCTGGGATCGTCCCCGTCCAATACCGCAGGGTGCCGTGTGTGAGAAAAGGAGGAGTTCGGTTCAGCCTGCAAGGAAACGGGTACTGGCTATTGGTGTACGTGATGAACGTGGGAGGAGGGGGCGATGTGTATTCAATGGCTGTGAAAGGAAGCAAAACGGGATGGATAAACATGAGCCATAACTGGGGAGCTTCGTATCAAGCTTTTGCCTCTTTGGGTGGCCAATGCCTTTCTTTCAAGATCACTTCATTCACAACTAAAGAGACCATTACTCTGTGGAATGTCATTCCTTCCAATTGGCAAGTTGGGTTGTCCTATAATTCCAATTTCAACTTCCAT

Protein sequence

MASFSGSWLFNFLLVAFIFAVVSGSAVAVFQPSPWKLAHATFYGDETASETMGGACGYGNLFVNGYGTDTAALSSTLFNNGYACGTCFQIKCVQSKACYANVAFTTVTATNLCPPNWSQDSNAGGWCNPPRVHFDMAKPAFMKIAEWKAGIVPVQYRRVPCVRKGGVRFSLQGNGYWLLVYVMNVGGGGDVYSMAVKGSKTGWINMSHNWGASYQAFASLGGQCLSFKITSFTTKETITLWNVIPSNWQVGLSYNSNFNFH

Homology

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BLAST of MS017873 vs. NCBI nr
Match: XP_022159664.1 (expansin-A7-like [Momordica charantia])

HSP 1 Score: 547.7 bits (1410), Expect = 5.3e-152
Identity = 260/261 (99.62%), Postives = 260/261 (99.62%), Query Frame = 0


Query: 1   MASFSGSWLFNFLLVAFIFAVVSGSAVAVFQPSPWKLAHATFYGDETASETMGGACGYGN 60
           MASFSGSWLFNFLLVAFIFAVVSGSAVAVFQPSPWKLAHATFYGDETASETMGGACGYGN
Sbjct: 1   MASFSGSWLFNFLLVAFIFAVVSGSAVAVFQPSPWKLAHATFYGDETASETMGGACGYGN 60

Query: 61  LFVNGYGTDTAALSSTLFNNGYACGTCFQIKCVQSKACYANVAFTTVTATNLCPPNWSQD 120
           LFVNGYGTDTAALSSTLFNNGYACGTCFQIKCVQSKACYAN AFTTVTATNLCPPNWSQD
Sbjct: 61  LFVNGYGTDTAALSSTLFNNGYACGTCFQIKCVQSKACYANFAFTTVTATNLCPPNWSQD 120

Query: 121 SNAGGWCNPPRVHFDMAKPAFMKIAEWKAGIVPVQYRRVPCVRKGGVRFSLQGNGYWLLV 180
           SNAGGWCNPPRVHFDMAKPAFMKIAEWKAGIVPVQYRRVPCVRKGGVRFSLQGNGYWLLV
Sbjct: 121 SNAGGWCNPPRVHFDMAKPAFMKIAEWKAGIVPVQYRRVPCVRKGGVRFSLQGNGYWLLV 180

Query: 181 YVMNVGGGGDVYSMAVKGSKTGWINMSHNWGASYQAFASLGGQCLSFKITSFTTKETITL 240
           YVMNVGGGGDVYSMAVKGSKTGWINMSHNWGASYQAFASLGGQCLSFKITSFTTKETITL
Sbjct: 181 YVMNVGGGGDVYSMAVKGSKTGWINMSHNWGASYQAFASLGGQCLSFKITSFTTKETITL 240

Query: 241 WNVIPSNWQVGLSYNSNFNFH 262
           WNVIPSNWQVGLSYNSNFNFH
Sbjct: 241 WNVIPSNWQVGLSYNSNFNFH 261

[Close]

BLAST of MS017873 vs. NCBI nr
Match: KAA0042813.1 (expansin-A7 [Cucumis melo var. makuwa])

HSP 1 Score: 488.0 bits (1255), Expect = 5.0e-134
Identity = 229/261 (87.74%), Postives = 242/261 (92.72%), Query Frame = 0


Query: 1   MASFSGSWLFNFLLVAFIFAVVSGSAVAVFQPSPWKLAHATFYGDETASETMGGACGYGN 60
           MAS S S  FN  +VA + A+   S +AVF+PSPWKLAHATFYGDETASETMGGACGYGN
Sbjct: 1   MAS-SSSLSFNLFMVALVLAISIRSTLAVFRPSPWKLAHATFYGDETASETMGGACGYGN 60

Query: 61  LFVNGYGTDTAALSSTLFNNGYACGTCFQIKCVQSKACYANVAFTTVTATNLCPPNWSQD 120
           LF NGYGTDT ALSSTLFNNGYACG CFQIKCVQSKACYANV FTTVTATNLCPPNWSQD
Sbjct: 61  LFTNGYGTDTVALSSTLFNNGYACGACFQIKCVQSKACYANVPFTTVTATNLCPPNWSQD 120

Query: 121 SNAGGWCNPPRVHFDMAKPAFMKIAEWKAGIVPVQYRRVPCVRKGGVRFSLQGNGYWLLV 180
           SNAGGWCNPPRVHFDMAKPAFMKIA WKAGI+PVQYRRVPCV+KGGVRFSLQGNGYWLLV
Sbjct: 121 SNAGGWCNPPRVHFDMAKPAFMKIAWWKAGIIPVQYRRVPCVKKGGVRFSLQGNGYWLLV 180

Query: 181 YVMNVGGGGDVYSMAVKGSKTGWINMSHNWGASYQAFASLGGQCLSFKITSFTTKETITL 240
           YVMNVGGGGDVYSMAVKGSKTGWI MSHNWGASYQAFASLGGQ LSF+ITS+TT+ET+TL
Sbjct: 181 YVMNVGGGGDVYSMAVKGSKTGWITMSHNWGASYQAFASLGGQSLSFRITSYTTRETLTL 240

Query: 241 WNVIPSNWQVGLSYNSNFNFH 262
           WNV+PSNWQVGL+YNSNFNFH
Sbjct: 241 WNVLPSNWQVGLTYNSNFNFH 260

[Close]

BLAST of MS017873 vs. NCBI nr
Match: XP_038875954.1 (expansin-A7-like [Benincasa hispida])

HSP 1 Score: 487.6 bits (1254), Expect = 6.5e-134
Identity = 230/260 (88.46%), Postives = 242/260 (93.08%), Query Frame = 0


Query: 1   MASFSGSWLFNFLLVAFIFAVVSGSAVAVFQPSPWKLAHATFYGDETASETMGGACGYGN 60
           MAS SG   FN  LVA + A+ + S +AVFQPSPWKLAHATFYGDETASETMGGACGYGN
Sbjct: 1   MASSSG---FNIFLVALVLAIFTRSTLAVFQPSPWKLAHATFYGDETASETMGGACGYGN 60

Query: 61  LFVNGYGTDTAALSSTLFNNGYACGTCFQIKCVQSKACYANVAFTTVTATNLCPPNWSQD 120
           LF NGYGTDT ALSSTLFNNGYACGTCFQIKCVQSKACYANV FTTVTATNLCPPNWSQ+
Sbjct: 61  LFTNGYGTDTVALSSTLFNNGYACGTCFQIKCVQSKACYANVPFTTVTATNLCPPNWSQN 120

Query: 121 SNAGGWCNPPRVHFDMAKPAFMKIAEWKAGIVPVQYRRVPCVRKGGVRFSLQGNGYWLLV 180
           SNAGGWCNPPRVHFDMAKPAFMKIA WKAGIVPVQYRRVPCV+KGGVRFSLQGNGYWLLV
Sbjct: 121 SNAGGWCNPPRVHFDMAKPAFMKIAWWKAGIVPVQYRRVPCVKKGGVRFSLQGNGYWLLV 180

Query: 181 YVMNVGGGGDVYSMAVKGSKTGWINMSHNWGASYQAFASLGGQCLSFKITSFTTKETITL 240
           YVMNVGGGGDVYSMAVKGSKTGWI MSHNWGASYQAFASLGGQ LSF+ITS+TT+ET+TL
Sbjct: 181 YVMNVGGGGDVYSMAVKGSKTGWITMSHNWGASYQAFASLGGQSLSFRITSYTTRETLTL 240

Query: 241 WNVIPSNWQVGLSYNSNFNF 261
           WNV+PSNWQVGL+YNSN NF
Sbjct: 241 WNVLPSNWQVGLTYNSNLNF 257

[Close]

BLAST of MS017873 vs. NCBI nr
Match: XP_008437185.1 (PREDICTED: expansin-A7 [Cucumis melo])

HSP 1 Score: 485.3 bits (1248), Expect = 3.2e-133
Identity = 227/261 (86.97%), Postives = 242/261 (92.72%), Query Frame = 0


Query: 1   MASFSGSWLFNFLLVAFIFAVVSGSAVAVFQPSPWKLAHATFYGDETASETMGGACGYGN 60
           MAS S S  FN  +VA + A+   S +AVF+PSPWKLAHATFYGDETAS+TMGGACGYGN
Sbjct: 1   MAS-SSSLSFNLFMVALVLAISIRSTLAVFRPSPWKLAHATFYGDETASQTMGGACGYGN 60

Query: 61  LFVNGYGTDTAALSSTLFNNGYACGTCFQIKCVQSKACYANVAFTTVTATNLCPPNWSQD 120
           LF NGYGTDT ALSSTLFNNGYACG CFQIKCVQSKACYANV FTTVTATNLCPPNWSQD
Sbjct: 61  LFTNGYGTDTVALSSTLFNNGYACGACFQIKCVQSKACYANVPFTTVTATNLCPPNWSQD 120

Query: 121 SNAGGWCNPPRVHFDMAKPAFMKIAEWKAGIVPVQYRRVPCVRKGGVRFSLQGNGYWLLV 180
           SNAGGWCNPPRVHFDMAKPAFMKIA WKAGI+PVQYRRVPCV+KGGVRFSLQGNGYWLLV
Sbjct: 121 SNAGGWCNPPRVHFDMAKPAFMKIAWWKAGIIPVQYRRVPCVKKGGVRFSLQGNGYWLLV 180

Query: 181 YVMNVGGGGDVYSMAVKGSKTGWINMSHNWGASYQAFASLGGQCLSFKITSFTTKETITL 240
           YVMNVGGGGDVYSMAVKGSKTGWI MSHNWGASYQAFASLGGQ LSF+ITS+TT+ET+TL
Sbjct: 181 YVMNVGGGGDVYSMAVKGSKTGWITMSHNWGASYQAFASLGGQSLSFRITSYTTRETLTL 240

Query: 241 WNVIPSNWQVGLSYNSNFNFH 262
           WNV+PSNW+VGL+YNSNFNFH
Sbjct: 241 WNVLPSNWRVGLTYNSNFNFH 260

[Close]

BLAST of MS017873 vs. NCBI nr
Match: XP_004144001.1 (expansin-A7 [Cucumis sativus] >KGN50161.1 hypothetical protein Csa_000294 [Cucumis sativus])

HSP 1 Score: 484.2 bits (1245), Expect = 7.2e-133
Identity = 227/260 (87.31%), Postives = 240/260 (92.31%), Query Frame = 0


Query: 1   MASFSGSWLFNFLLVAFIFAVVSGSAVAVFQPSPWKLAHATFYGDETASETMGGACGYGN 60
           MAS S S  FN  +VA + A+   S +AVFQPSPWKLAHATFYGDETASETMGGACGYGN
Sbjct: 1   MAS-SSSLSFNLFMVALVLAIFMRSTLAVFQPSPWKLAHATFYGDETASETMGGACGYGN 60

Query: 61  LFVNGYGTDTAALSSTLFNNGYACGTCFQIKCVQSKACYANVAFTTVTATNLCPPNWSQD 120
           LF NGYGTDT ALSSTLFNNGYACGTCFQIKCVQSKACYANV FTTVTATNLCPPNWSQD
Sbjct: 61  LFTNGYGTDTVALSSTLFNNGYACGTCFQIKCVQSKACYANVPFTTVTATNLCPPNWSQD 120

Query: 121 SNAGGWCNPPRVHFDMAKPAFMKIAEWKAGIVPVQYRRVPCVRKGGVRFSLQGNGYWLLV 180
           SNAGGWCNPPRVHFDMAKPAFMKIA WKAGIVPVQYRRVPC +KGG+RFSLQGNGYWLLV
Sbjct: 121 SNAGGWCNPPRVHFDMAKPAFMKIAWWKAGIVPVQYRRVPCAKKGGIRFSLQGNGYWLLV 180

Query: 181 YVMNVGGGGDVYSMAVKGSKTGWINMSHNWGASYQAFASLGGQCLSFKITSFTTKETITL 240
           YVMNVGGGGDVYSMAVKGSKTGWI MSHNWGASYQAF+SLGGQ LSF+ITS+TT+ET+TL
Sbjct: 181 YVMNVGGGGDVYSMAVKGSKTGWITMSHNWGASYQAFSSLGGQSLSFRITSYTTRETLTL 240

Query: 241 WNVIPSNWQVGLSYNSNFNF 261
           WNV+PSNWQVGL+YNS FNF
Sbjct: 241 WNVLPSNWQVGLTYNSKFNF 259

[Close]

BLAST of MS017873 vs. ExPASy Swiss-Prot
Match: Q9LN94 (Expansin-A7 OS=Arabidopsis thaliana OX=3702 GN=EXPA7 PE=3 SV=1)

HSP 1 Score: 382.1 bits (980), Expect = 5.0e-105
Identity = 178/262 (67.94%), Postives = 205/262 (78.24%), Query Frame = 0


Query: 1   MASFSGSWLFN-FLLVAFIFAVVSGSAVA-VFQPSPWKLAHATFYGDETASETMGGACGY 60
           M   S SW FN F  + F+   +SG  VA  ++P PW+ AHATFYGDET  ETMGGACGY
Sbjct: 1   MGPISSSWSFNKFFSIVFVVFAISGEFVAGYYRPGPWRYAHATFYGDETGGETMGGACGY 60

Query: 61  GNLFVNGYGTDTAALSSTLFNNGYACGTCFQIKCVQSKACYANVAFTTVTATNLCPPNWS 120
           GNLF +GYG  TAALS+TLFN+GY CG CFQI C +S  CY+  + T VTATNLCPPNW 
Sbjct: 61  GNLFNSGYGLSTAALSTTLFNDGYGCGQCFQITCSKSPHCYSGKS-TVVTATNLCPPNWY 120

Query: 121 QDSNAGGWCNPPRVHFDMAKPAFMKIAEWKAGIVPVQYRRVPCVRKGGVRFSLQGNGYWL 180
           QDSNAGGWCNPPR HFDMAKPAFMK+A W+AGI+PV YRRVPC R GG+RF  QGN YWL
Sbjct: 121 QDSNAGGWCNPPRTHFDMAKPAFMKLAYWRAGIIPVAYRRVPCQRSGGMRFQFQGNSYWL 180

Query: 181 LVYVMNVGGGGDVYSMAVKGSKTGWINMSHNWGASYQAFASLGGQCLSFKITSFTTKETI 240
           L++VMNVGG GD+ SMAVKGS+T WI+MSHNWGASYQAF+SL GQ LSF++TS+TT ETI
Sbjct: 181 LIFVMNVGGAGDIKSMAVKGSRTNWISMSHNWGASYQAFSSLYGQSLSFRVTSYTTGETI 240

Query: 241 TLWNVIPSNWQVGLSYNSNFNF 261
             WNV P+NW  G +Y S  NF
Sbjct: 241 YAWNVAPANWSGGKTYKSTANF 261

[Close]

BLAST of MS017873 vs. ExPASy Swiss-Prot
Match: Q9LQ07 (Expansin-A18 OS=Arabidopsis thaliana OX=3702 GN=EXPA18 PE=2 SV=1)

HSP 1 Score: 354.8 bits (909), Expect = 8.6e-97
Identity = 160/253 (63.24%), Postives = 195/253 (77.08%), Query Frame = 0


Query: 9   LFNFLLVAFIFAVVSGSAVAVFQPSPWKLAHATFYGDETASETMGGACGYGNLFVNGYGT 68
           L+   LV      + G+++A +  +PW+ A ATFYGD+T S TMGGACGYGN++ +GYG 
Sbjct: 5   LYRKCLVILSMMAMIGTSMATYAGTPWRTASATFYGDDTGSATMGGACGYGNMYDSGYGV 64

Query: 69  DTAALSSTLFNNGYACGTCFQIKCVQSKACYANVAFTTVTATNLCPPNWSQDSNAGGWCN 128
            T ALS+ LFN GYACG CFQ+KCV S  CY     T VTATN+CPPN+ Q SN GGWCN
Sbjct: 65  ATTALSTALFNEGYACGQCFQLKCVSSPNCYYGSPATVVTATNICPPNYGQASNNGGWCN 124

Query: 129 PPRVHFDMAKPAFMKIAEWKAGIVPVQYRRVPCVRKGGVRFSLQGNGYWLLVYVMNVGGG 188
           PPRVHFD+ KPAFMKIA WKAGI+PV YRRV C + GG+RF  +GNGYWLLVYVMNVGG 
Sbjct: 125 PPRVHFDLTKPAFMKIANWKAGIIPVSYRRVACKKIGGIRFKFEGNGYWLLVYVMNVGGP 184

Query: 189 GDVYSMAVKGSKTGWINMSHNWGASYQAFASLGGQCLSFKITSFTTKETITLWNVIPSNW 248
           GD+ +MAVKGS+TGWINMSHNWGASYQAF+SL GQ LSF++TS+TT++TI  +N  P++W
Sbjct: 185 GDIKTMAVKGSRTGWINMSHNWGASYQAFSSLYGQSLSFRLTSYTTRQTIYAYNAAPASW 244

Query: 249 QVGLSYNSNFNFH 262
             G +Y S  NF+
Sbjct: 245 SAGKTYQSKANFN 257

[Close]

BLAST of MS017873 vs. ExPASy Swiss-Prot
Match: Q8W2X8 (Putative expansin-A30 OS=Oryza sativa subsp. japonica OX=39947 GN=EXPA30 PE=3 SV=1)

HSP 1 Score: 343.6 bits (880), Expect = 2.0e-93
Identity = 163/265 (61.51%), Postives = 198/265 (74.72%), Query Frame = 0


Query: 1   MASFSGSWLFNFLLVAFIFAVVSGSAV--AVFQPSPWKLAHATFYGDETASETMGGACGY 60
           MA+ S +     +L A I ++   +    A F+   W  AHATFYGDETASETMGGACGY
Sbjct: 1   MAAASSTTATTAILAAVIISLAGAATTVDAKFRAMQWTPAHATFYGDETASETMGGACGY 60

Query: 61  GNLFVNGYGTDTAALSSTLFNNGYACGTCFQIKCVQSKACYANVAFTTVTATNLCPPNWS 120
           GNL+ +GYGTDTAALS+TLF +GY CGTC+Q++CV + +CY      TVTATNLCPPNW+
Sbjct: 61  GNLYASGYGTDTAALSTTLFKDGYGCGTCYQMRCVGTASCYRGSPAITVTATNLCPPNWA 120

Query: 121 QDSN--AGGWCNPPRVHFDMAKPAFMKIAEWKAGIVPVQYRRVPCVRKGGVRFSLQGNGY 180
           +D +   GGWCNPPR HFD++KPAFM++A+W+AGIVPV YRRVPC R GG+RF+LQGN Y
Sbjct: 121 EDPDRGGGGWCNPPRAHFDLSKPAFMRMADWRAGIVPVMYRRVPCARAGGLRFALQGNPY 180

Query: 181 WLLVYVMNVGGGGDVYSMAVK-GSKTGWINMSHNWGASYQAFASLGGQCLSFKITSFTTK 240
           WLL YVMNV G GDV  M VK G   GW+ MSHNWGASYQAFA LGGQ LSFK+TS+TT 
Sbjct: 181 WLLAYVMNVAGAGDVGDMWVKAGGGGGWVRMSHNWGASYQAFAQLGGQALSFKVTSYTTG 240

Query: 241 ETITLWNVIPSNWQVGLSYNSNFNF 261
           +TI    V P++W  GL+Y +  NF
Sbjct: 241 QTILAAGVTPASWCFGLTYQARVNF 265

[Close]

BLAST of MS017873 vs. ExPASy Swiss-Prot
Match: O48818 (Expansin-A4 OS=Arabidopsis thaliana OX=3702 GN=EXPA4 PE=1 SV=1)

HSP 1 Score: 283.1 bits (723), Expect = 3.2e-75
Identity = 125/238 (52.52%), Postives = 173/238 (72.69%), Query Frame = 0


Query: 18  IFAVVSGSAVAVFQPSPWKLAHATFYGDETASETMGGACGYGNLFVNGYGTDTAALSSTL 77
           +F++       ++    W+ AHATFYG   AS TMGGACGYGNL+  GYGT+TAALS+ L
Sbjct: 14  LFSLADARIPGIYSGGAWQNAHATFYGGSDASGTMGGACGYGNLYSQGYGTNTAALSTAL 73

Query: 78  FNNGYACGTCFQIKCVQS-KACYANVAFTTVTATNLCPPNWSQDSNAGGWCNPPRVHFDM 137
           FNNG +CG CF++KC    + C++      +TATN CPPN +Q S+ GGWCNPPR HFD+
Sbjct: 74  FNNGMSCGACFELKCANDPQWCHSGSPSILITATNFCPPNLAQPSDNGGWCNPPREHFDL 133

Query: 138 AKPAFMKIAEWKAGIVPVQYRRVPCVRKGGVRFSLQGNGYWLLVYVMNVGGGGDVYSMAV 197
           A P F+KIA+++AGIVPV YRRVPC ++GG+RF++ G+ Y+ LV + NV G GD+   +V
Sbjct: 134 AMPVFLKIAQYRAGIVPVSYRRVPCRKRGGIRFTINGHRYFNLVLITNVAGAGDIVRASV 193

Query: 198 KGSKTGWINMSHNWGASYQAFASLGGQCLSFKITSFTTKETITLWNVIPSNWQVGLSY 255
           KGS+TGW+++S NWG ++Q+ A L GQ LSF++T  + + T T WN++PSNWQ G ++
Sbjct: 194 KGSRTGWMSLSRNWGQNWQSNAVLVGQALSFRVTG-SDRRTSTSWNMVPSNWQFGQTF 250

[Close]

BLAST of MS017873 vs. ExPASy Swiss-Prot
Match: Q9M2S9 (Expansin-A16 OS=Arabidopsis thaliana OX=3702 GN=EXPA16 PE=2 SV=1)

HSP 1 Score: 282.0 bits (720), Expect = 7.1e-75
Identity = 134/244 (54.92%), Postives = 176/244 (72.13%), Query Frame = 0


Query: 12  FLLVAFIFAVVSGSAVAVFQPSPWKLAHATFYGDETASETMGGACGYGNLFVNGYGTDTA 71
           FLL++F  A +      VF    W+ AHATFYG   AS TMGGACGYGNL+  GYGT+TA
Sbjct: 15  FLLLSFTDAGIP----RVFSGGSWQTAHATFYGGNDASGTMGGACGYGNLYSQGYGTNTA 74

Query: 72  ALSSTLFNNGYACGTCFQIKCVQS-KACYANVAFTTVTATNLCPPNWSQDSNAGGWCNPP 131
           ALS++LFN+G +CG CF+IKCV   K C+       VTATN CPPN +Q S+ GGWCNPP
Sbjct: 75  ALSTSLFNSGQSCGACFEIKCVNDPKWCHPGNPSVFVTATNFCPPNLAQPSDNGGWCNPP 134

Query: 132 RVHFDMAKPAFMKIAEWKAGIVPVQYRRVPCVRKGGVRFSLQGNGYWLLVYVMNVGGGGD 191
           R HFD+A P F+KIAE++AGIVP+ YRRV C + GG+RF++ G+ Y+ LV + NV G GD
Sbjct: 135 RSHFDLAMPVFLKIAEYRAGIVPISYRRVACRKSGGIRFTINGHRYFNLVLITNVAGAGD 194

Query: 192 VYSMAVKGSKTGWINMSHNWGASYQAFASLGGQCLSFKITSFTTKETITLWNVIPSNWQV 251
           +   +VKGSKTGW++++ NWG ++Q+ A L GQ LSF++TS + + T T WN+ PSNWQ 
Sbjct: 195 IARTSVKGSKTGWMSLTRNWGQNWQSNAVLVGQSLSFRVTS-SDRRTSTSWNIAPSNWQF 253

Query: 252 GLSY 255
           G ++
Sbjct: 255 GQTF 253

[Close]

BLAST of MS017873 vs. ExPASy TrEMBL
Match: A0A6J1E306 (Expansin OS=Momordica charantia OX=3673 GN=LOC111026009 PE=3 SV=1)

HSP 1 Score: 547.7 bits (1410), Expect = 2.6e-152
Identity = 260/261 (99.62%), Postives = 260/261 (99.62%), Query Frame = 0


Query: 1   MASFSGSWLFNFLLVAFIFAVVSGSAVAVFQPSPWKLAHATFYGDETASETMGGACGYGN 60
           MASFSGSWLFNFLLVAFIFAVVSGSAVAVFQPSPWKLAHATFYGDETASETMGGACGYGN
Sbjct: 1   MASFSGSWLFNFLLVAFIFAVVSGSAVAVFQPSPWKLAHATFYGDETASETMGGACGYGN 60

Query: 61  LFVNGYGTDTAALSSTLFNNGYACGTCFQIKCVQSKACYANVAFTTVTATNLCPPNWSQD 120
           LFVNGYGTDTAALSSTLFNNGYACGTCFQIKCVQSKACYAN AFTTVTATNLCPPNWSQD
Sbjct: 61  LFVNGYGTDTAALSSTLFNNGYACGTCFQIKCVQSKACYANFAFTTVTATNLCPPNWSQD 120

Query: 121 SNAGGWCNPPRVHFDMAKPAFMKIAEWKAGIVPVQYRRVPCVRKGGVRFSLQGNGYWLLV 180
           SNAGGWCNPPRVHFDMAKPAFMKIAEWKAGIVPVQYRRVPCVRKGGVRFSLQGNGYWLLV
Sbjct: 121 SNAGGWCNPPRVHFDMAKPAFMKIAEWKAGIVPVQYRRVPCVRKGGVRFSLQGNGYWLLV 180

Query: 181 YVMNVGGGGDVYSMAVKGSKTGWINMSHNWGASYQAFASLGGQCLSFKITSFTTKETITL 240
           YVMNVGGGGDVYSMAVKGSKTGWINMSHNWGASYQAFASLGGQCLSFKITSFTTKETITL
Sbjct: 181 YVMNVGGGGDVYSMAVKGSKTGWINMSHNWGASYQAFASLGGQCLSFKITSFTTKETITL 240

Query: 241 WNVIPSNWQVGLSYNSNFNFH 262
           WNVIPSNWQVGLSYNSNFNFH
Sbjct: 241 WNVIPSNWQVGLSYNSNFNFH 261

[Close]

BLAST of MS017873 vs. ExPASy TrEMBL
Match: A0A5A7THN7 (Expansin OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold44G003170 PE=3 SV=1)

HSP 1 Score: 488.0 bits (1255), Expect = 2.4e-134
Identity = 229/261 (87.74%), Postives = 242/261 (92.72%), Query Frame = 0


Query: 1   MASFSGSWLFNFLLVAFIFAVVSGSAVAVFQPSPWKLAHATFYGDETASETMGGACGYGN 60
           MAS S S  FN  +VA + A+   S +AVF+PSPWKLAHATFYGDETASETMGGACGYGN
Sbjct: 1   MAS-SSSLSFNLFMVALVLAISIRSTLAVFRPSPWKLAHATFYGDETASETMGGACGYGN 60

Query: 61  LFVNGYGTDTAALSSTLFNNGYACGTCFQIKCVQSKACYANVAFTTVTATNLCPPNWSQD 120
           LF NGYGTDT ALSSTLFNNGYACG CFQIKCVQSKACYANV FTTVTATNLCPPNWSQD
Sbjct: 61  LFTNGYGTDTVALSSTLFNNGYACGACFQIKCVQSKACYANVPFTTVTATNLCPPNWSQD 120

Query: 121 SNAGGWCNPPRVHFDMAKPAFMKIAEWKAGIVPVQYRRVPCVRKGGVRFSLQGNGYWLLV 180
           SNAGGWCNPPRVHFDMAKPAFMKIA WKAGI+PVQYRRVPCV+KGGVRFSLQGNGYWLLV
Sbjct: 121 SNAGGWCNPPRVHFDMAKPAFMKIAWWKAGIIPVQYRRVPCVKKGGVRFSLQGNGYWLLV 180

Query: 181 YVMNVGGGGDVYSMAVKGSKTGWINMSHNWGASYQAFASLGGQCLSFKITSFTTKETITL 240
           YVMNVGGGGDVYSMAVKGSKTGWI MSHNWGASYQAFASLGGQ LSF+ITS+TT+ET+TL
Sbjct: 181 YVMNVGGGGDVYSMAVKGSKTGWITMSHNWGASYQAFASLGGQSLSFRITSYTTRETLTL 240

Query: 241 WNVIPSNWQVGLSYNSNFNFH 262
           WNV+PSNWQVGL+YNSNFNFH
Sbjct: 241 WNVLPSNWQVGLTYNSNFNFH 260

[Close]

BLAST of MS017873 vs. ExPASy TrEMBL
Match: A0A1S3ATJ0 (Expansin OS=Cucumis melo OX=3656 GN=LOC103482689 PE=3 SV=1)

HSP 1 Score: 485.3 bits (1248), Expect = 1.6e-133
Identity = 227/261 (86.97%), Postives = 242/261 (92.72%), Query Frame = 0


Query: 1   MASFSGSWLFNFLLVAFIFAVVSGSAVAVFQPSPWKLAHATFYGDETASETMGGACGYGN 60
           MAS S S  FN  +VA + A+   S +AVF+PSPWKLAHATFYGDETAS+TMGGACGYGN
Sbjct: 1   MAS-SSSLSFNLFMVALVLAISIRSTLAVFRPSPWKLAHATFYGDETASQTMGGACGYGN 60

Query: 61  LFVNGYGTDTAALSSTLFNNGYACGTCFQIKCVQSKACYANVAFTTVTATNLCPPNWSQD 120
           LF NGYGTDT ALSSTLFNNGYACG CFQIKCVQSKACYANV FTTVTATNLCPPNWSQD
Sbjct: 61  LFTNGYGTDTVALSSTLFNNGYACGACFQIKCVQSKACYANVPFTTVTATNLCPPNWSQD 120

Query: 121 SNAGGWCNPPRVHFDMAKPAFMKIAEWKAGIVPVQYRRVPCVRKGGVRFSLQGNGYWLLV 180
           SNAGGWCNPPRVHFDMAKPAFMKIA WKAGI+PVQYRRVPCV+KGGVRFSLQGNGYWLLV
Sbjct: 121 SNAGGWCNPPRVHFDMAKPAFMKIAWWKAGIIPVQYRRVPCVKKGGVRFSLQGNGYWLLV 180

Query: 181 YVMNVGGGGDVYSMAVKGSKTGWINMSHNWGASYQAFASLGGQCLSFKITSFTTKETITL 240
           YVMNVGGGGDVYSMAVKGSKTGWI MSHNWGASYQAFASLGGQ LSF+ITS+TT+ET+TL
Sbjct: 181 YVMNVGGGGDVYSMAVKGSKTGWITMSHNWGASYQAFASLGGQSLSFRITSYTTRETLTL 240

Query: 241 WNVIPSNWQVGLSYNSNFNFH 262
           WNV+PSNW+VGL+YNSNFNFH
Sbjct: 241 WNVLPSNWRVGLTYNSNFNFH 260

[Close]

BLAST of MS017873 vs. ExPASy TrEMBL
Match: A0A0A0KR05 (Expansin OS=Cucumis sativus OX=3659 GN=Csa_5G156210 PE=3 SV=1)

HSP 1 Score: 484.2 bits (1245), Expect = 3.5e-133
Identity = 227/260 (87.31%), Postives = 240/260 (92.31%), Query Frame = 0


Query: 1   MASFSGSWLFNFLLVAFIFAVVSGSAVAVFQPSPWKLAHATFYGDETASETMGGACGYGN 60
           MAS S S  FN  +VA + A+   S +AVFQPSPWKLAHATFYGDETASETMGGACGYGN
Sbjct: 1   MAS-SSSLSFNLFMVALVLAIFMRSTLAVFQPSPWKLAHATFYGDETASETMGGACGYGN 60

Query: 61  LFVNGYGTDTAALSSTLFNNGYACGTCFQIKCVQSKACYANVAFTTVTATNLCPPNWSQD 120
           LF NGYGTDT ALSSTLFNNGYACGTCFQIKCVQSKACYANV FTTVTATNLCPPNWSQD
Sbjct: 61  LFTNGYGTDTVALSSTLFNNGYACGTCFQIKCVQSKACYANVPFTTVTATNLCPPNWSQD 120

Query: 121 SNAGGWCNPPRVHFDMAKPAFMKIAEWKAGIVPVQYRRVPCVRKGGVRFSLQGNGYWLLV 180
           SNAGGWCNPPRVHFDMAKPAFMKIA WKAGIVPVQYRRVPC +KGG+RFSLQGNGYWLLV
Sbjct: 121 SNAGGWCNPPRVHFDMAKPAFMKIAWWKAGIVPVQYRRVPCAKKGGIRFSLQGNGYWLLV 180

Query: 181 YVMNVGGGGDVYSMAVKGSKTGWINMSHNWGASYQAFASLGGQCLSFKITSFTTKETITL 240
           YVMNVGGGGDVYSMAVKGSKTGWI MSHNWGASYQAF+SLGGQ LSF+ITS+TT+ET+TL
Sbjct: 181 YVMNVGGGGDVYSMAVKGSKTGWITMSHNWGASYQAFSSLGGQSLSFRITSYTTRETLTL 240

Query: 241 WNVIPSNWQVGLSYNSNFNF 261
           WNV+PSNWQVGL+YNS FNF
Sbjct: 241 WNVLPSNWQVGLTYNSKFNF 259

[Close]

BLAST of MS017873 vs. ExPASy TrEMBL
Match: A0A6J1E3X3 (Expansin OS=Cucurbita moschata OX=3662 GN=LOC111430371 PE=3 SV=1)

HSP 1 Score: 473.4 bits (1217), Expect = 6.1e-130
Identity = 221/260 (85.00%), Postives = 237/260 (91.15%), Query Frame = 0


Query: 1   MASFSGSWLFNFLLVAFIFAVVSGSAVAVFQPSPWKLAHATFYGDETASETMGGACGYGN 60
           MAS  G   FNF  +  +FA+ +   +AVF+PSPWKLAHATFYGDETAS TMGGACGYGN
Sbjct: 1   MASSLG---FNFFFLPLVFAIFTRPTLAVFRPSPWKLAHATFYGDETASATMGGACGYGN 60

Query: 61  LFVNGYGTDTAALSSTLFNNGYACGTCFQIKCVQSKACYANVAFTTVTATNLCPPNWSQD 120
           LF NGYGTDT ALSSTLFNNGYACGTCFQIKCVQSKACYANV +TTVTATNLCPPNWSQD
Sbjct: 61  LFTNGYGTDTVALSSTLFNNGYACGTCFQIKCVQSKACYANVKYTTVTATNLCPPNWSQD 120

Query: 121 SNAGGWCNPPRVHFDMAKPAFMKIAEWKAGIVPVQYRRVPCVRKGGVRFSLQGNGYWLLV 180
           SNAGGWCNPPRVHFDMAKPAFMKIA WKAGIVPV YRRVPC +KGGVRFS QGNGYWLLV
Sbjct: 121 SNAGGWCNPPRVHFDMAKPAFMKIAWWKAGIVPVAYRRVPCAKKGGVRFSFQGNGYWLLV 180

Query: 181 YVMNVGGGGDVYSMAVKGSKTGWINMSHNWGASYQAFASLGGQCLSFKITSFTTKETITL 240
           YVMNVGGGGDVYSMAVKGSKTGWI MSHNWGASYQAF+SLGGQ LSF+ITS+TT+ET++L
Sbjct: 181 YVMNVGGGGDVYSMAVKGSKTGWITMSHNWGASYQAFSSLGGQGLSFRITSYTTRETLSL 240

Query: 241 WNVIPSNWQVGLSYNSNFNF 261
           WNVIPSNWQVGL+YN+NFNF
Sbjct: 241 WNVIPSNWQVGLTYNTNFNF 257

[Close]

BLAST of MS017873 vs. TAIR 10
Match: AT1G12560.1 (expansin A7 )

HSP 1 Score: 382.1 bits (980), Expect = 3.6e-106
Identity = 178/262 (67.94%), Postives = 205/262 (78.24%), Query Frame = 0


Query: 1   MASFSGSWLFN-FLLVAFIFAVVSGSAVA-VFQPSPWKLAHATFYGDETASETMGGACGY 60
           M   S SW FN F  + F+   +SG  VA  ++P PW+ AHATFYGDET  ETMGGACGY
Sbjct: 1   MGPISSSWSFNKFFSIVFVVFAISGEFVAGYYRPGPWRYAHATFYGDETGGETMGGACGY 60

Query: 61  GNLFVNGYGTDTAALSSTLFNNGYACGTCFQIKCVQSKACYANVAFTTVTATNLCPPNWS 120
           GNLF +GYG  TAALS+TLFN+GY CG CFQI C +S  CY+  + T VTATNLCPPNW 
Sbjct: 61  GNLFNSGYGLSTAALSTTLFNDGYGCGQCFQITCSKSPHCYSGKS-TVVTATNLCPPNWY 120

Query: 121 QDSNAGGWCNPPRVHFDMAKPAFMKIAEWKAGIVPVQYRRVPCVRKGGVRFSLQGNGYWL 180
           QDSNAGGWCNPPR HFDMAKPAFMK+A W+AGI+PV YRRVPC R GG+RF  QGN YWL
Sbjct: 121 QDSNAGGWCNPPRTHFDMAKPAFMKLAYWRAGIIPVAYRRVPCQRSGGMRFQFQGNSYWL 180

Query: 181 LVYVMNVGGGGDVYSMAVKGSKTGWINMSHNWGASYQAFASLGGQCLSFKITSFTTKETI 240
           L++VMNVGG GD+ SMAVKGS+T WI+MSHNWGASYQAF+SL GQ LSF++TS+TT ETI
Sbjct: 181 LIFVMNVGGAGDIKSMAVKGSRTNWISMSHNWGASYQAFSSLYGQSLSFRVTSYTTGETI 240

Query: 241 TLWNVIPSNWQVGLSYNSNFNF 261
             WNV P+NW  G +Y S  NF
Sbjct: 241 YAWNVAPANWSGGKTYKSTANF 261

[Close]

BLAST of MS017873 vs. TAIR 10
Match: AT1G62980.1 (expansin A18 )

HSP 1 Score: 354.8 bits (909), Expect = 6.1e-98
Identity = 160/253 (63.24%), Postives = 195/253 (77.08%), Query Frame = 0


Query: 9   LFNFLLVAFIFAVVSGSAVAVFQPSPWKLAHATFYGDETASETMGGACGYGNLFVNGYGT 68
           L+   LV      + G+++A +  +PW+ A ATFYGD+T S TMGGACGYGN++ +GYG 
Sbjct: 5   LYRKCLVILSMMAMIGTSMATYAGTPWRTASATFYGDDTGSATMGGACGYGNMYDSGYGV 64

Query: 69  DTAALSSTLFNNGYACGTCFQIKCVQSKACYANVAFTTVTATNLCPPNWSQDSNAGGWCN 128
            T ALS+ LFN GYACG CFQ+KCV S  CY     T VTATN+CPPN+ Q SN GGWCN
Sbjct: 65  ATTALSTALFNEGYACGQCFQLKCVSSPNCYYGSPATVVTATNICPPNYGQASNNGGWCN 124

Query: 129 PPRVHFDMAKPAFMKIAEWKAGIVPVQYRRVPCVRKGGVRFSLQGNGYWLLVYVMNVGGG 188
           PPRVHFD+ KPAFMKIA WKAGI+PV YRRV C + GG+RF  +GNGYWLLVYVMNVGG 
Sbjct: 125 PPRVHFDLTKPAFMKIANWKAGIIPVSYRRVACKKIGGIRFKFEGNGYWLLVYVMNVGGP 184

Query: 189 GDVYSMAVKGSKTGWINMSHNWGASYQAFASLGGQCLSFKITSFTTKETITLWNVIPSNW 248
           GD+ +MAVKGS+TGWINMSHNWGASYQAF+SL GQ LSF++TS+TT++TI  +N  P++W
Sbjct: 185 GDIKTMAVKGSRTGWINMSHNWGASYQAFSSLYGQSLSFRLTSYTTRQTIYAYNAAPASW 244

Query: 249 QVGLSYNSNFNFH 262
             G +Y S  NF+
Sbjct: 245 SAGKTYQSKANFN 257

[Close]

BLAST of MS017873 vs. TAIR 10
Match: AT2G39700.1 (expansin A4 )

HSP 1 Score: 283.1 bits (723), Expect = 2.3e-76
Identity = 125/238 (52.52%), Postives = 173/238 (72.69%), Query Frame = 0


Query: 18  IFAVVSGSAVAVFQPSPWKLAHATFYGDETASETMGGACGYGNLFVNGYGTDTAALSSTL 77
           +F++       ++    W+ AHATFYG   AS TMGGACGYGNL+  GYGT+TAALS+ L
Sbjct: 14  LFSLADARIPGIYSGGAWQNAHATFYGGSDASGTMGGACGYGNLYSQGYGTNTAALSTAL 73

Query: 78  FNNGYACGTCFQIKCVQS-KACYANVAFTTVTATNLCPPNWSQDSNAGGWCNPPRVHFDM 137
           FNNG +CG CF++KC    + C++      +TATN CPPN +Q S+ GGWCNPPR HFD+
Sbjct: 74  FNNGMSCGACFELKCANDPQWCHSGSPSILITATNFCPPNLAQPSDNGGWCNPPREHFDL 133

Query: 138 AKPAFMKIAEWKAGIVPVQYRRVPCVRKGGVRFSLQGNGYWLLVYVMNVGGGGDVYSMAV 197
           A P F+KIA+++AGIVPV YRRVPC ++GG+RF++ G+ Y+ LV + NV G GD+   +V
Sbjct: 134 AMPVFLKIAQYRAGIVPVSYRRVPCRKRGGIRFTINGHRYFNLVLITNVAGAGDIVRASV 193

Query: 198 KGSKTGWINMSHNWGASYQAFASLGGQCLSFKITSFTTKETITLWNVIPSNWQVGLSY 255
           KGS+TGW+++S NWG ++Q+ A L GQ LSF++T  + + T T WN++PSNWQ G ++
Sbjct: 194 KGSRTGWMSLSRNWGQNWQSNAVLVGQALSFRVTG-SDRRTSTSWNMVPSNWQFGQTF 250

[Close]

BLAST of MS017873 vs. TAIR 10
Match: AT3G55500.1 (expansin A16 )

HSP 1 Score: 282.0 bits (720), Expect = 5.0e-76
Identity = 134/244 (54.92%), Postives = 176/244 (72.13%), Query Frame = 0


Query: 12  FLLVAFIFAVVSGSAVAVFQPSPWKLAHATFYGDETASETMGGACGYGNLFVNGYGTDTA 71
           FLL++F  A +      VF    W+ AHATFYG   AS TMGGACGYGNL+  GYGT+TA
Sbjct: 15  FLLLSFTDAGIP----RVFSGGSWQTAHATFYGGNDASGTMGGACGYGNLYSQGYGTNTA 74

Query: 72  ALSSTLFNNGYACGTCFQIKCVQS-KACYANVAFTTVTATNLCPPNWSQDSNAGGWCNPP 131
           ALS++LFN+G +CG CF+IKCV   K C+       VTATN CPPN +Q S+ GGWCNPP
Sbjct: 75  ALSTSLFNSGQSCGACFEIKCVNDPKWCHPGNPSVFVTATNFCPPNLAQPSDNGGWCNPP 134

Query: 132 RVHFDMAKPAFMKIAEWKAGIVPVQYRRVPCVRKGGVRFSLQGNGYWLLVYVMNVGGGGD 191
           R HFD+A P F+KIAE++AGIVP+ YRRV C + GG+RF++ G+ Y+ LV + NV G GD
Sbjct: 135 RSHFDLAMPVFLKIAEYRAGIVPISYRRVACRKSGGIRFTINGHRYFNLVLITNVAGAGD 194

Query: 192 VYSMAVKGSKTGWINMSHNWGASYQAFASLGGQCLSFKITSFTTKETITLWNVIPSNWQV 251
           +   +VKGSKTGW++++ NWG ++Q+ A L GQ LSF++TS + + T T WN+ PSNWQ 
Sbjct: 195 IARTSVKGSKTGWMSLTRNWGQNWQSNAVLVGQSLSFRVTS-SDRRTSTSWNIAPSNWQF 253

Query: 252 GLSY 255
           G ++
Sbjct: 255 GQTF 253

[Close]

BLAST of MS017873 vs. TAIR 10
Match: AT2G37640.1 (Barwin-like endoglucanases superfamily protein )

HSP 1 Score: 274.6 bits (701), Expect = 8.0e-74
Identity = 130/251 (51.79%), Postives = 172/251 (68.53%), Query Frame = 0


Query: 6   GSWLFNFLLVAFIFAVVSGSAVAVFQPSPWKLAHATFYGDETASETMGGACGYGNLFVNG 65
           G WL   +  +F+    +     V+   PW+ AHATFYG   AS TMGGACGYGNL+  G
Sbjct: 9   GLWL--AVTASFLLTATNAKIPGVYSGGPWQNAHATFYGGSDASGTMGGACGYGNLYSQG 68

Query: 66  YGTDTAALSSTLFNNGYACGTCFQIKCVQS-KACYANVAFTTVTATNLCPPNWSQDSNAG 125
           YG +TAALS+ LFNNG++CG CF+IKC    + C        VTATN CPPN++Q S+ G
Sbjct: 69  YGVNTAALSTALFNNGFSCGACFEIKCTDDPRWCVPGNPSILVTATNFCPPNFAQPSDDG 128

Query: 126 GWCNPPRVHFDMAKPAFMKIAEWKAGIVPVQYRRVPCVRKGGVRFSLQGNGYWLLVYVMN 185
           GWCNPPR HFD+A P F+KI  ++AGIVPV YRRVPC + GG+RF++ G  Y+ LV V N
Sbjct: 129 GWCNPPREHFDLAMPMFLKIGLYRAGIVPVSYRRVPCRKIGGIRFTVNGFRYFNLVLVTN 188

Query: 186 VGGGGDVYSMAVKGSKTGWINMSHNWGASYQAFASLGGQCLSFKITSFTTKETITLWNVI 245
           V G GD+  ++VKGSKT W+ MS NWG ++Q+ A L GQ LSF++T+ + + + T WNV 
Sbjct: 189 VAGAGDINGVSVKGSKTDWVRMSRNWGQNWQSNAVLIGQSLSFRVTA-SDRRSSTSWNVA 248

Query: 246 PSNWQVGLSYN 256
           P+ WQ G +++
Sbjct: 249 PATWQFGQTFS 256

The following BLAST results are available for this feature:

BLAST of MS017873 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022159664.1	5.3e-152	99.62	expansin-A7-like [Momordica charantia]	[more]
KAA0042813.1	5.0e-134	87.74	expansin-A7 [Cucumis melo var. makuwa]	[more]
XP_038875954.1	6.5e-134	88.46	expansin-A7-like [Benincasa hispida]	[more]
XP_008437185.1	3.2e-133	86.97	PREDICTED: expansin-A7 [Cucumis melo]	[more]
XP_004144001.1	7.2e-133	87.31	expansin-A7 [Cucumis sativus] >KGN50161.1 hypothetical protein Csa_000294 [Cucum...	[more]

BLAST of MS017873 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9LN94	5.0e-105	67.94	Expansin-A7 OS=Arabidopsis thaliana OX=3702 GN=EXPA7 PE=3 SV=1	[more]
Q9LQ07	8.6e-97	63.24	Expansin-A18 OS=Arabidopsis thaliana OX=3702 GN=EXPA18 PE=2 SV=1	[more]
Q8W2X8	2.0e-93	61.51	Putative expansin-A30 OS=Oryza sativa subsp. japonica OX=39947 GN=EXPA30 PE=3 SV...	[more]
O48818	3.2e-75	52.52	Expansin-A4 OS=Arabidopsis thaliana OX=3702 GN=EXPA4 PE=1 SV=1	[more]
Q9M2S9	7.1e-75	54.92	Expansin-A16 OS=Arabidopsis thaliana OX=3702 GN=EXPA16 PE=2 SV=1	[more]

BLAST of MS017873 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1E306	2.6e-152	99.62	Expansin OS=Momordica charantia OX=3673 GN=LOC111026009 PE=3 SV=1	[more]
A0A5A7THN7	2.4e-134	87.74	Expansin OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold44G003170 PE=3 ...	[more]
A0A1S3ATJ0	1.6e-133	86.97	Expansin OS=Cucumis melo OX=3656 GN=LOC103482689 PE=3 SV=1	[more]
A0A0A0KR05	3.5e-133	87.31	Expansin OS=Cucumis sativus OX=3659 GN=Csa_5G156210 PE=3 SV=1	[more]
A0A6J1E3X3	6.1e-130	85.00	Expansin OS=Cucurbita moschata OX=3662 GN=LOC111430371 PE=3 SV=1	[more]

BLAST of MS017873 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G12560.1	3.6e-106	67.94	expansin A7	[more]
AT1G62980.1	6.1e-98	63.24	expansin A18	[more]
AT2G39700.1	2.3e-76	52.52	expansin A4	[more]
AT3G55500.1	5.0e-76	54.92	expansin A16	[more]
AT2G37640.1	8.0e-74	51.79	Barwin-like endoglucanases superfamily protein	[more]

InterPro

Analysis Name: InterPro Annotations of Bitter gourd (TR) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR002963	Expansin	PRINTS	PR01226	EXPANSIN	coord: 105..115 score: 73.03 coord: 177..198 score: 50.45 coord: 124..141 score: 76.85 coord: 165..177 score: 47.69 coord: 141..154 score: 62.86 coord: 65..79 score: 75.11 coord: 242..258 score: 36.08
IPR007118	Expansin/Lol pI	PRINTS	PR01225	EXPANSNFAMLY	coord: 242..256 score: 41.0 coord: 34..49 score: 54.84 coord: 203..217 score: 43.83 coord: 74..92 score: 54.34 coord: 149..165 score: 65.44 coord: 52..70 score: 65.79
IPR007112	Expansin/pollen allergen, DPBB domain	SMART	SM00837	dpbb_1	coord: 70..156 e-value: 6.1E-46 score: 168.6
IPR007112	Expansin/pollen allergen, DPBB domain	PROSITE	PS50842	EXPANSIN_EG45	coord: 53..166 score: 29.387962
IPR036749	Expansin, cellulose-binding-like domain superfamily	GENE3D	2.60.40.760		coord: 166..261 e-value: 4.8E-21 score: 76.5
IPR036749	Expansin, cellulose-binding-like domain superfamily	SUPERFAMILY	49590	PHL pollen allergen	coord: 163..256
IPR007117	Expansin, cellulose-binding-like domain	PFAM	PF01357	Expansin_C	coord: 167..245 e-value: 4.3E-22 score: 77.9
IPR007117	Expansin, cellulose-binding-like domain	PROSITE	PS50843	EXPANSIN_CBD	coord: 176..256 score: 20.678596
IPR009009	RlpA-like protein, double-psi beta-barrel domain	PFAM	PF03330	DPBB_1	coord: 70..156 e-value: 7.7E-22 score: 77.4
IPR036908	RlpA-like domain superfamily	GENE3D	2.40.40.10		coord: 19..161 e-value: 3.0E-43 score: 149.2
IPR036908	RlpA-like domain superfamily	SUPERFAMILY	50685	Barwin-like endoglucanases	coord: 14..184
None	No IPR available	PANTHER	PTHR31867	EXPANSIN-A15	coord: 10..261
None	No IPR available	PANTHER	PTHR31867:SF2	EXPANSIN-A7	coord: 10..261

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
MS017873.1	MS017873.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0009664	plant-type cell wall organization
cellular_component	GO:0005576	extracellular region