MS017772 (gene) Bitter gourd (TR) v1

Overview


Name	MS017772
Type	gene
Organism	Momordica charantia cv. TR (Bitter gourd (TR) v1)
Description	Actin-depolymerizing factor
Location	scaffold373: 2422778 .. 2423794 (+)
RNA-Seq Expression	MS017772
Synteny	MS017772

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

GCGAACGCAGCATCTGGAATGGCCGTTAGAGATGAATGTAAATTGAAGTTTTTGGAGCTAAAAGCAAAGAGAAATTACAGATTCATCATTTTCAAGATCGACCAACAGGAAGTGGTGGTAGATAAATTGGGAAAACCAGAAGAAACGTATGAAGATTTTACCGGATCTCTTCCATCAGATGAGTGTCGCTATGCTGTCTTTGATTTTGATTTTATTACTGATGAGAATGTTCAGAAGAGCAAGATTTTCTTCATTGCATGGTAAGTACGTAGGTAAATTTATTAGGAAATTTCATCATTTTCATTTTACTTCTTCCCTCCAATGTTCTTTTTAATAATTACCCGGCCTCAAATGAAAAATGACAAACAAAAAAAAAGAAAGAAAGAAAGAAAAGAAAAGAAAAGAAAAGAGAGAAATTTCTGATAATCGAAGAAAAGAGAGAAATTTCTGATAATCGATAGTTAACATCAACTTGATTAACTATAATAATGATAGTAATCACTAATTCACCTCAATATTAGTTAACTATATAATTACTAATTATCCTACCTGTAAATTATACTTCGTTTTTTCCTCTCTATCTGTATTATGCAGGTACAATGTTTGAATCAATATAATAGAGAACATTTTCTCTTGCATCTCTATGAGATTCTTCGTTATGATTTGCTTGTTTCACTTGTTTCGGATAATAACTTCTCTTAGAAAGATCATGATGTCATTGTAATATTGGAGTTGATTTGTTTATGTCTTGAACCTTTTTCGTGATTCGATAGGTAACTTGATAAGCCAAGGACACACTTATTGTCGGATATACGTGTGCTGTAATATTTGCTATATTTTCAAATATTGTTGTTTTTAATGTTTATTAGGTCACCAGACATATCTAAGGTGAGAAGTAAAATGGTGTATGCCAGCTCCAAGGATAGATTCAAAAGAGAATTGGATGGCATTCAATTTGAGTTGCAAGCAACAGATCCGAGCGAGATGAGTTTTGACATTGTCAAGGCACGTGCATTT

mRNA sequence

GCGAACGCAGCATCTGGAATGGCCGTTAGAGATGAATGTAAATTGAAGTTTTTGGAGCTAAAAGCAAAGAGAAATTACAGATTCATCATTTTCAAGATCGACCAACAGGAAGTGGTGGTAGATAAATTGGGAAAACCAGAAGAAACGTATGAAGATTTTACCGGATCTCTTCCATCAGATGAGTGTCGCTATGCTGTCTTTGATTTTGATTTTATTACTGATGAGAATGTTCAGAAGAGCAAGATTTTCTTCATTGCATGGTCACCAGACATATCTAAGGTGAGAAGTAAAATGGTGTATGCCAGCTCCAAGGATAGATTCAAAAGAGAATTGGATGGCATTCAATTTGAGTTGCAAGCAACAGATCCGAGCGAGATGAGTTTTGACATTGTCAAGGCACGTGCATTT

Coding sequence (CDS)

GCGAACGCAGCATCTGGAATGGCCGTTAGAGATGAATGTAAATTGAAGTTTTTGGAGCTAAAAGCAAAGAGAAATTACAGATTCATCATTTTCAAGATCGACCAACAGGAAGTGGTGGTAGATAAATTGGGAAAACCAGAAGAAACGTATGAAGATTTTACCGGATCTCTTCCATCAGATGAGTGTCGCTATGCTGTCTTTGATTTTGATTTTATTACTGATGAGAATGTTCAGAAGAGCAAGATTTTCTTCATTGCATGGTCACCAGACATATCTAAGGTGAGAAGTAAAATGGTGTATGCCAGCTCCAAGGATAGATTCAAAAGAGAATTGGATGGCATTCAATTTGAGTTGCAAGCAACAGATCCGAGCGAGATGAGTTTTGACATTGTCAAGGCACGTGCATTT

Protein sequence

ANAASGMAVRDECKLKFLELKAKRNYRFIIFKIDQQEVVVDKLGKPEETYEDFTGSLPSDECRYAVFDFDFITDENVQKSKIFFIAWSPDISKVRSKMVYASSKDRFKRELDGIQFELQATDPSEMSFDIVKARAF

Homology

[Close]

BLAST of MS017772 vs. NCBI nr
Match: XP_022159651.1 (actin-depolymerizing factor 7 [Momordica charantia])

HSP 1 Score: 271.9 bits (694), Expect = 2.9e-69
Identity = 136/136 (100.00%), Postives = 136/136 (100.00%), Query Frame = 0


Query: 1   ANAASGMAVRDECKLKFLELKAKRNYRFIIFKIDQQEVVVDKLGKPEETYEDFTGSLPSD 60
           ANAASGMAVRDECKLKFLELKAKRNYRFIIFKIDQQEVVVDKLGKPEETYEDFTGSLPSD
Sbjct: 2   ANAASGMAVRDECKLKFLELKAKRNYRFIIFKIDQQEVVVDKLGKPEETYEDFTGSLPSD 61

Query: 61  ECRYAVFDFDFITDENVQKSKIFFIAWSPDISKVRSKMVYASSKDRFKRELDGIQFELQA 120
           ECRYAVFDFDFITDENVQKSKIFFIAWSPDISKVRSKMVYASSKDRFKRELDGIQFELQA
Sbjct: 62  ECRYAVFDFDFITDENVQKSKIFFIAWSPDISKVRSKMVYASSKDRFKRELDGIQFELQA 121

Query: 121 TDPSEMSFDIVKARAF 137
           TDPSEMSFDIVKARAF
Sbjct: 122 TDPSEMSFDIVKARAF 137

[Close]

BLAST of MS017772 vs. NCBI nr
Match: XP_008437023.1 (PREDICTED: actin-depolymerizing factor 7 [Cucumis melo] >KAA0043488.1 actin-depolymerizing factor 7 [Cucumis melo var. makuwa])

HSP 1 Score: 263.5 bits (672), Expect = 1.0e-66
Identity = 130/136 (95.59%), Postives = 135/136 (99.26%), Query Frame = 0


Query: 1   ANAASGMAVRDECKLKFLELKAKRNYRFIIFKIDQQEVVVDKLGKPEETYEDFTGSLPSD 60
           ANAASGMAVRDECKLKFLELKAKRNYRFIIFKI+QQEVVV+KLG+P+ETYEDFTGSLP+D
Sbjct: 2   ANAASGMAVRDECKLKFLELKAKRNYRFIIFKIEQQEVVVEKLGRPDETYEDFTGSLPAD 61

Query: 61  ECRYAVFDFDFITDENVQKSKIFFIAWSPDISKVRSKMVYASSKDRFKRELDGIQFELQA 120
           ECRYAVFDFDFITDEN QKSKIFFIAWSPDISKVRSKMVYASSKDRFKRELDGIQFELQA
Sbjct: 62  ECRYAVFDFDFITDENCQKSKIFFIAWSPDISKVRSKMVYASSKDRFKRELDGIQFELQA 121

Query: 121 TDPSEMSFDIVKARAF 137
           TDPSEMSFDIVKARAF
Sbjct: 122 TDPSEMSFDIVKARAF 137

[Close]

BLAST of MS017772 vs. NCBI nr
Match: XP_004152385.2 (actin-depolymerizing factor 7 [Cucumis sativus] >KGN50293.1 hypothetical protein Csa_000362 [Cucumis sativus])

HSP 1 Score: 263.1 bits (671), Expect = 1.4e-66
Identity = 130/136 (95.59%), Postives = 135/136 (99.26%), Query Frame = 0


Query: 1   ANAASGMAVRDECKLKFLELKAKRNYRFIIFKIDQQEVVVDKLGKPEETYEDFTGSLPSD 60
           ANAASGMAVRDECKLKFLELKAKRNYRFIIFKI+QQEVVV+KLG+P+ETYEDFTGSLP+D
Sbjct: 2   ANAASGMAVRDECKLKFLELKAKRNYRFIIFKIEQQEVVVEKLGQPDETYEDFTGSLPAD 61

Query: 61  ECRYAVFDFDFITDENVQKSKIFFIAWSPDISKVRSKMVYASSKDRFKRELDGIQFELQA 120
           ECRYAVFDFDFITDEN QKSKIFFIAWSPDISKVRSKMVYASSKDRFKRELDGIQFELQA
Sbjct: 62  ECRYAVFDFDFITDENCQKSKIFFIAWSPDISKVRSKMVYASSKDRFKRELDGIQFELQA 121

Query: 121 TDPSEMSFDIVKARAF 137
           TDPSEMSFDIVKARAF
Sbjct: 122 TDPSEMSFDIVKARAF 137

[Close]

BLAST of MS017772 vs. NCBI nr
Match: KAG6579390.1 (Oxalate--CoA ligase, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 259.6 bits (662), Expect = 1.5e-65
Identity = 127/136 (93.38%), Postives = 133/136 (97.79%), Query Frame = 0


Query: 1   ANAASGMAVRDECKLKFLELKAKRNYRFIIFKIDQQEVVVDKLGKPEETYEDFTGSLPSD 60
           ANAASGMAVRDECKLKFLELKAKRNYRFI FKI++QEVV+DKLGKP+ TYEDFTGSLP+D
Sbjct: 489 ANAASGMAVRDECKLKFLELKAKRNYRFITFKIEEQEVVIDKLGKPDSTYEDFTGSLPAD 548

Query: 61  ECRYAVFDFDFITDENVQKSKIFFIAWSPDISKVRSKMVYASSKDRFKRELDGIQFELQA 120
           ECRYAVFDFDFITDEN QKSKIFFIAWSPDISKVRSKMVYASSKDRFKRELDGIQFELQA
Sbjct: 549 ECRYAVFDFDFITDENCQKSKIFFIAWSPDISKVRSKMVYASSKDRFKRELDGIQFELQA 608

Query: 121 TDPSEMSFDIVKARAF 137
           TDPSEMSFDIVK+RAF
Sbjct: 609 TDPSEMSFDIVKSRAF 624

[Close]

BLAST of MS017772 vs. NCBI nr
Match: XP_022995817.1 (actin-depolymerizing factor 7 [Cucurbita maxima] >XP_023534281.1 actin-depolymerizing factor 7 [Cucurbita pepo subsp. pepo] >KAG6605728.1 Actin-depolymerizing factor 7, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 257.7 bits (657), Expect = 5.7e-65
Identity = 126/136 (92.65%), Postives = 132/136 (97.06%), Query Frame = 0


Query: 1   ANAASGMAVRDECKLKFLELKAKRNYRFIIFKIDQQEVVVDKLGKPEETYEDFTGSLPSD 60
           AN+ASGM VRDECKLKFLELKAKRNYRFIIFKI+QQE+VV+KLGKPEETYEDFTGSLP+D
Sbjct: 2   ANSASGMTVRDECKLKFLELKAKRNYRFIIFKIEQQEIVVEKLGKPEETYEDFTGSLPAD 61

Query: 61  ECRYAVFDFDFITDENVQKSKIFFIAWSPDISKVRSKMVYASSKDRFKRELDGIQFELQA 120
           ECRYAVFDFDFITDEN QKSKIFFIAWSP+ SKVR KMVYASSKDRFKRELDGIQFELQA
Sbjct: 62  ECRYAVFDFDFITDENCQKSKIFFIAWSPETSKVRGKMVYASSKDRFKRELDGIQFELQA 121

Query: 121 TDPSEMSFDIVKARAF 137
           TDPSEMSFDIVKARAF
Sbjct: 122 TDPSEMSFDIVKARAF 137

[Close]

BLAST of MS017772 vs. ExPASy Swiss-Prot
Match: Q67ZM4 (Actin-depolymerizing factor 7 OS=Arabidopsis thaliana OX=3702 GN=ADF7 PE=2 SV=1)

HSP 1 Score: 238.8 bits (608), Expect = 3.6e-62
Identity = 116/135 (85.93%), Postives = 127/135 (94.07%), Query Frame = 0


Query: 1   ANAASGMAVRDECKLKFLELKAKRNYRFIIFKIDQQEVVVDKLGKPEETYEDFTGSLPSD 60
           ANAASGMAV DECKLKFLELK+KRNYRFIIF+ID Q+VVV+KLG P+ETY+DFT SLP++
Sbjct: 2   ANAASGMAVEDECKLKFLELKSKRNYRFIIFRIDGQQVVVEKLGNPDETYDDFTASLPAN 61

Query: 61  ECRYAVFDFDFITDENVQKSKIFFIAWSPDISKVRSKMVYASSKDRFKRELDGIQFELQA 120
           ECRYAVFDFDFITDEN QKSKIFFIAWSPD S+VR KMVYASSKDRFKRELDGIQ ELQA
Sbjct: 62  ECRYAVFDFDFITDENCQKSKIFFIAWSPDSSRVRMKMVYASSKDRFKRELDGIQVELQA 121

Query: 121 TDPSEMSFDIVKARA 136
           TDPSEMSFDI+K+RA
Sbjct: 122 TDPSEMSFDIIKSRA 136

[Close]

BLAST of MS017772 vs. ExPASy Swiss-Prot
Match: Q8LFH6 (Actin-depolymerizing factor 12 OS=Arabidopsis thaliana OX=3702 GN=ADF12 PE=2 SV=2)

HSP 1 Score: 228.0 bits (580), Expect = 6.3e-59
Identity = 111/135 (82.22%), Postives = 122/135 (90.37%), Query Frame = 0


Query: 1   ANAASGMAVRDECKLKFLELKAKRNYRFIIFKIDQQEVVVDKLGKPEETYEDFTGSLPSD 60
           ANAASGMAV DECKLKFLELKAKRNYRFIIF+ID Q+VVV+KLG P+E Y+DFT  LP +
Sbjct: 2   ANAASGMAVEDECKLKFLELKAKRNYRFIIFRIDGQQVVVEKLGSPQENYDDFTNYLPPN 61

Query: 61  ECRYAVFDFDFITDENVQKSKIFFIAWSPDISKVRSKMVYASSKDRFKRELDGIQFELQA 120
           ECRYAV+DFDF T EN+QKSKIFFIAWSPD S+VR KMVYASSKDRFKRELDGIQ ELQA
Sbjct: 62  ECRYAVYDFDFTTAENIQKSKIFFIAWSPDSSRVRMKMVYASSKDRFKRELDGIQVELQA 121

Query: 121 TDPSEMSFDIVKARA 136
           TDPSEMS DI+K+RA
Sbjct: 122 TDPSEMSLDIIKSRA 136

[Close]

BLAST of MS017772 vs. ExPASy Swiss-Prot
Match: Q9LQ81 (Actin-depolymerizing factor 10 OS=Arabidopsis thaliana OX=3702 GN=ADF10 PE=2 SV=1)

HSP 1 Score: 225.7 bits (574), Expect = 3.1e-58
Identity = 110/136 (80.88%), Postives = 122/136 (89.71%), Query Frame = 0


Query: 1   ANAASGMAVRDECKLKFLELKAKRNYRFIIFKIDQ--QEVVVDKLGKPEETYEDFTGSLP 60
           AN+ASGM V DECKLKFLELKAKRNYRFI+FKID+  Q+V++DKLG PEETYEDFT S+P
Sbjct: 2   ANSASGMHVSDECKLKFLELKAKRNYRFIVFKIDEKAQQVMIDKLGNPEETYEDFTRSIP 61

Query: 61  SDECRYAVFDFDFITDENVQKSKIFFIAWSPDISKVRSKMVYASSKDRFKRELDGIQFEL 120
            DECRYAV+D+DF T EN QKSKIFFIAWSPD S+VRSKM+YASSKDRFKRELDGIQ EL
Sbjct: 62  EDECRYAVYDYDFTTPENCQKSKIFFIAWSPDTSRVRSKMLYASSKDRFKRELDGIQVEL 121

Query: 121 QATDPSEMSFDIVKAR 135
           QATDPSEMS DI+K R
Sbjct: 122 QATDPSEMSLDIIKGR 137

[Close]

BLAST of MS017772 vs. ExPASy Swiss-Prot
Match: Q7XSN9 (Actin-depolymerizing factor 6 OS=Oryza sativa subsp. japonica OX=39947 GN=ADF6 PE=2 SV=2)

HSP 1 Score: 223.8 bits (569), Expect = 1.2e-57
Identity = 110/137 (80.29%), Postives = 125/137 (91.24%), Query Frame = 0


Query: 1   ANAASGMAVRDECKLKFLELKAKRNYRFIIFKIDQ--QEVVVDKLGKPEETYEDFTGSLP 60
           AN+ASGMAV DECKLKF ELK+KR++RFI FKID+  Q+VVVD+LG+P +TY+DFT S+P
Sbjct: 2   ANSASGMAVGDECKLKFQELKSKRSFRFITFKIDERTQQVVVDRLGQPGDTYDDFTASMP 61

Query: 61  SDECRYAVFDFDFITDENVQKSKIFFIAWSPDISKVRSKMVYASSKDRFKRELDGIQFEL 120
           + ECRYAVFDFDF+TDEN QKSKIFFI+WSPD SKVRSKM+YASSKDRFKRELDGIQ EL
Sbjct: 62  ASECRYAVFDFDFVTDENCQKSKIFFISWSPDTSKVRSKMLYASSKDRFKRELDGIQVEL 121

Query: 121 QATDPSEMSFDIVKARA 136
           QATDPSEMS DIVKARA
Sbjct: 122 QATDPSEMSMDIVKARA 138

[Close]

BLAST of MS017772 vs. ExPASy Swiss-Prot
Match: Q6EUH7 (Actin-depolymerizing factor 1 OS=Oryza sativa subsp. japonica OX=39947 GN=ADF1 PE=2 SV=1)

HSP 1 Score: 222.6 bits (566), Expect = 2.7e-57
Identity = 108/137 (78.83%), Postives = 127/137 (92.70%), Query Frame = 0


Query: 1   ANAASGMAVRDECKLKFLELKAKRNYRFIIFKIDQ--QEVVVDKLGKPEETYEDFTGSLP 60
           +N+ASGMAV DECKLKFLELKAKR++RFI+FKI++  Q+VVVD+LG+P E+Y+DFT  LP
Sbjct: 2   SNSASGMAVCDECKLKFLELKAKRSFRFIVFKINEKVQQVVVDRLGQPGESYDDFTACLP 61

Query: 61  SDECRYAVFDFDFITDENVQKSKIFFIAWSPDISKVRSKMVYASSKDRFKRELDGIQFEL 120
           +DECRYAVFDFDF+TDEN QKSKIFFI+W+PD S+VRSKM+YASSKDRFKRELDGIQ EL
Sbjct: 62  ADECRYAVFDFDFVTDENCQKSKIFFISWAPDTSRVRSKMLYASSKDRFKRELDGIQVEL 121

Query: 121 QATDPSEMSFDIVKARA 136
           QATDPSEMS DIVK+RA
Sbjct: 122 QATDPSEMSMDIVKSRA 138

[Close]

BLAST of MS017772 vs. ExPASy TrEMBL
Match: A0A6J1E4K0 (actin-depolymerizing factor 7 OS=Momordica charantia OX=3673 GN=LOC111025996 PE=3 SV=1)

HSP 1 Score: 271.9 bits (694), Expect = 1.4e-69
Identity = 136/136 (100.00%), Postives = 136/136 (100.00%), Query Frame = 0


Query: 1   ANAASGMAVRDECKLKFLELKAKRNYRFIIFKIDQQEVVVDKLGKPEETYEDFTGSLPSD 60
           ANAASGMAVRDECKLKFLELKAKRNYRFIIFKIDQQEVVVDKLGKPEETYEDFTGSLPSD
Sbjct: 2   ANAASGMAVRDECKLKFLELKAKRNYRFIIFKIDQQEVVVDKLGKPEETYEDFTGSLPSD 61

Query: 61  ECRYAVFDFDFITDENVQKSKIFFIAWSPDISKVRSKMVYASSKDRFKRELDGIQFELQA 120
           ECRYAVFDFDFITDENVQKSKIFFIAWSPDISKVRSKMVYASSKDRFKRELDGIQFELQA
Sbjct: 62  ECRYAVFDFDFITDENVQKSKIFFIAWSPDISKVRSKMVYASSKDRFKRELDGIQFELQA 121

Query: 121 TDPSEMSFDIVKARAF 137
           TDPSEMSFDIVKARAF
Sbjct: 122 TDPSEMSFDIVKARAF 137

[Close]

BLAST of MS017772 vs. ExPASy TrEMBL
Match: A0A5A7TKY7 (Actin-depolymerizing factor 7 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold1167G00280 PE=3 SV=1)

HSP 1 Score: 263.5 bits (672), Expect = 5.0e-67
Identity = 130/136 (95.59%), Postives = 135/136 (99.26%), Query Frame = 0


Query: 1   ANAASGMAVRDECKLKFLELKAKRNYRFIIFKIDQQEVVVDKLGKPEETYEDFTGSLPSD 60
           ANAASGMAVRDECKLKFLELKAKRNYRFIIFKI+QQEVVV+KLG+P+ETYEDFTGSLP+D
Sbjct: 2   ANAASGMAVRDECKLKFLELKAKRNYRFIIFKIEQQEVVVEKLGRPDETYEDFTGSLPAD 61

Query: 61  ECRYAVFDFDFITDENVQKSKIFFIAWSPDISKVRSKMVYASSKDRFKRELDGIQFELQA 120
           ECRYAVFDFDFITDEN QKSKIFFIAWSPDISKVRSKMVYASSKDRFKRELDGIQFELQA
Sbjct: 62  ECRYAVFDFDFITDENCQKSKIFFIAWSPDISKVRSKMVYASSKDRFKRELDGIQFELQA 121

Query: 121 TDPSEMSFDIVKARAF 137
           TDPSEMSFDIVKARAF
Sbjct: 122 TDPSEMSFDIVKARAF 137

[Close]

BLAST of MS017772 vs. ExPASy TrEMBL
Match: A0A1S3ATL2 (actin-depolymerizing factor 7 OS=Cucumis melo OX=3656 GN=LOC103482576 PE=3 SV=1)

HSP 1 Score: 263.5 bits (672), Expect = 5.0e-67
Identity = 130/136 (95.59%), Postives = 135/136 (99.26%), Query Frame = 0


Query: 1   ANAASGMAVRDECKLKFLELKAKRNYRFIIFKIDQQEVVVDKLGKPEETYEDFTGSLPSD 60
           ANAASGMAVRDECKLKFLELKAKRNYRFIIFKI+QQEVVV+KLG+P+ETYEDFTGSLP+D
Sbjct: 2   ANAASGMAVRDECKLKFLELKAKRNYRFIIFKIEQQEVVVEKLGRPDETYEDFTGSLPAD 61

Query: 61  ECRYAVFDFDFITDENVQKSKIFFIAWSPDISKVRSKMVYASSKDRFKRELDGIQFELQA 120
           ECRYAVFDFDFITDEN QKSKIFFIAWSPDISKVRSKMVYASSKDRFKRELDGIQFELQA
Sbjct: 62  ECRYAVFDFDFITDENCQKSKIFFIAWSPDISKVRSKMVYASSKDRFKRELDGIQFELQA 121

Query: 121 TDPSEMSFDIVKARAF 137
           TDPSEMSFDIVKARAF
Sbjct: 122 TDPSEMSFDIVKARAF 137

[Close]

BLAST of MS017772 vs. ExPASy TrEMBL
Match: A0A0A0KKY8 (ADF-H domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_5G165880 PE=3 SV=1)

HSP 1 Score: 263.1 bits (671), Expect = 6.5e-67
Identity = 130/136 (95.59%), Postives = 135/136 (99.26%), Query Frame = 0


Query: 1   ANAASGMAVRDECKLKFLELKAKRNYRFIIFKIDQQEVVVDKLGKPEETYEDFTGSLPSD 60
           ANAASGMAVRDECKLKFLELKAKRNYRFIIFKI+QQEVVV+KLG+P+ETYEDFTGSLP+D
Sbjct: 2   ANAASGMAVRDECKLKFLELKAKRNYRFIIFKIEQQEVVVEKLGQPDETYEDFTGSLPAD 61

Query: 61  ECRYAVFDFDFITDENVQKSKIFFIAWSPDISKVRSKMVYASSKDRFKRELDGIQFELQA 120
           ECRYAVFDFDFITDEN QKSKIFFIAWSPDISKVRSKMVYASSKDRFKRELDGIQFELQA
Sbjct: 62  ECRYAVFDFDFITDENCQKSKIFFIAWSPDISKVRSKMVYASSKDRFKRELDGIQFELQA 121

Query: 121 TDPSEMSFDIVKARAF 137
           TDPSEMSFDIVKARAF
Sbjct: 122 TDPSEMSFDIVKARAF 137

[Close]

BLAST of MS017772 vs. ExPASy TrEMBL
Match: A0A6J1K020 (actin-depolymerizing factor 7 OS=Cucurbita maxima OX=3661 GN=LOC111491240 PE=3 SV=1)

HSP 1 Score: 257.7 bits (657), Expect = 2.8e-65
Identity = 126/136 (92.65%), Postives = 132/136 (97.06%), Query Frame = 0


Query: 1   ANAASGMAVRDECKLKFLELKAKRNYRFIIFKIDQQEVVVDKLGKPEETYEDFTGSLPSD 60
           AN+ASGM VRDECKLKFLELKAKRNYRFIIFKI+QQE+VV+KLGKPEETYEDFTGSLP+D
Sbjct: 2   ANSASGMTVRDECKLKFLELKAKRNYRFIIFKIEQQEIVVEKLGKPEETYEDFTGSLPAD 61

Query: 61  ECRYAVFDFDFITDENVQKSKIFFIAWSPDISKVRSKMVYASSKDRFKRELDGIQFELQA 120
           ECRYAVFDFDFITDEN QKSKIFFIAWSP+ SKVR KMVYASSKDRFKRELDGIQFELQA
Sbjct: 62  ECRYAVFDFDFITDENCQKSKIFFIAWSPETSKVRGKMVYASSKDRFKRELDGIQFELQA 121

Query: 121 TDPSEMSFDIVKARAF 137
           TDPSEMSFDIVKARAF
Sbjct: 122 TDPSEMSFDIVKARAF 137

[Close]

BLAST of MS017772 vs. TAIR 10
Match: AT4G25590.1 (actin depolymerizing factor 7 )

HSP 1 Score: 238.8 bits (608), Expect = 2.5e-63
Identity = 116/135 (85.93%), Postives = 127/135 (94.07%), Query Frame = 0


Query: 1   ANAASGMAVRDECKLKFLELKAKRNYRFIIFKIDQQEVVVDKLGKPEETYEDFTGSLPSD 60
           ANAASGMAV DECKLKFLELK+KRNYRFIIF+ID Q+VVV+KLG P+ETY+DFT SLP++
Sbjct: 2   ANAASGMAVEDECKLKFLELKSKRNYRFIIFRIDGQQVVVEKLGNPDETYDDFTASLPAN 61

Query: 61  ECRYAVFDFDFITDENVQKSKIFFIAWSPDISKVRSKMVYASSKDRFKRELDGIQFELQA 120
           ECRYAVFDFDFITDEN QKSKIFFIAWSPD S+VR KMVYASSKDRFKRELDGIQ ELQA
Sbjct: 62  ECRYAVFDFDFITDENCQKSKIFFIAWSPDSSRVRMKMVYASSKDRFKRELDGIQVELQA 121

Query: 121 TDPSEMSFDIVKARA 136
           TDPSEMSFDI+K+RA
Sbjct: 122 TDPSEMSFDIIKSRA 136

[Close]

BLAST of MS017772 vs. TAIR 10
Match: AT5G52360.1 (actin depolymerizing factor 10 )

HSP 1 Score: 228.0 bits (580), Expect = 4.5e-60
Identity = 111/135 (82.22%), Postives = 122/135 (90.37%), Query Frame = 0


Query: 1   ANAASGMAVRDECKLKFLELKAKRNYRFIIFKIDQQEVVVDKLGKPEETYEDFTGSLPSD 60
           ANAASGMAV DECKLKFLELKAKRNYRFIIF+ID Q+VVV+KLG P+E Y+DFT  LP +
Sbjct: 2   ANAASGMAVEDECKLKFLELKAKRNYRFIIFRIDGQQVVVEKLGSPQENYDDFTNYLPPN 61

Query: 61  ECRYAVFDFDFITDENVQKSKIFFIAWSPDISKVRSKMVYASSKDRFKRELDGIQFELQA 120
           ECRYAV+DFDF T EN+QKSKIFFIAWSPD S+VR KMVYASSKDRFKRELDGIQ ELQA
Sbjct: 62  ECRYAVYDFDFTTAENIQKSKIFFIAWSPDSSRVRMKMVYASSKDRFKRELDGIQVELQA 121

Query: 121 TDPSEMSFDIVKARA 136
           TDPSEMS DI+K+RA
Sbjct: 122 TDPSEMSLDIIKSRA 136

[Close]

BLAST of MS017772 vs. TAIR 10
Match: AT1G01750.1 (actin depolymerizing factor 11 )

HSP 1 Score: 225.7 bits (574), Expect = 2.2e-59
Identity = 110/136 (80.88%), Postives = 122/136 (89.71%), Query Frame = 0


Query: 1   ANAASGMAVRDECKLKFLELKAKRNYRFIIFKIDQ--QEVVVDKLGKPEETYEDFTGSLP 60
           AN+ASGM V DECKLKFLELKAKRNYRFI+FKID+  Q+V++DKLG PEETYEDFT S+P
Sbjct: 2   ANSASGMHVSDECKLKFLELKAKRNYRFIVFKIDEKAQQVMIDKLGNPEETYEDFTRSIP 61

Query: 61  SDECRYAVFDFDFITDENVQKSKIFFIAWSPDISKVRSKMVYASSKDRFKRELDGIQFEL 120
            DECRYAV+D+DF T EN QKSKIFFIAWSPD S+VRSKM+YASSKDRFKRELDGIQ EL
Sbjct: 62  EDECRYAVYDYDFTTPENCQKSKIFFIAWSPDTSRVRSKMLYASSKDRFKRELDGIQVEL 121

Query: 121 QATDPSEMSFDIVKAR 135
           QATDPSEMS DI+K R
Sbjct: 122 QATDPSEMSLDIIKGR 137

[Close]

BLAST of MS017772 vs. TAIR 10
Match: AT4G00680.1 (actin depolymerizing factor 8 )

HSP 1 Score: 218.8 bits (556), Expect = 2.7e-57
Identity = 104/136 (76.47%), Postives = 121/136 (88.97%), Query Frame = 0


Query: 1   ANAASGMAVRDECKLKFLELKAKRNYRFIIFKIDQ--QEVVVDKLGKPEETYEDFTGSLP 60
           AN+ASGM V DECK+KFLELKAKR YRFI+FKID+  Q+V ++KLG PEETY+DFT S+P
Sbjct: 2   ANSASGMHVNDECKIKFLELKAKRTYRFIVFKIDEKAQQVQIEKLGNPEETYDDFTSSIP 61

Query: 61  SDECRYAVFDFDFITDENVQKSKIFFIAWSPDISKVRSKMVYASSKDRFKRELDGIQFEL 120
            DECRYAV+DFDF T++N QKSKIFFIAWSPD S+VRSKM+YASSKDRFKRE++GIQ EL
Sbjct: 62  DDECRYAVYDFDFTTEDNCQKSKIFFIAWSPDTSRVRSKMLYASSKDRFKREMEGIQVEL 121

Query: 121 QATDPSEMSFDIVKAR 135
           QATDPSEMS DI+K R
Sbjct: 122 QATDPSEMSLDIIKGR 137

[Close]

BLAST of MS017772 vs. TAIR 10
Match: AT5G59890.1 (actin depolymerizing factor 4 )

HSP 1 Score: 211.5 bits (537), Expect = 4.3e-55
Identity = 99/136 (72.79%), Postives = 122/136 (89.71%), Query Frame = 0


Query: 1   ANAASGMAVRDECKLKFLELKAKRNYRFIIFKID--QQEVVVDKLGKPEETYEDFTGSLP 60
           ANAASGMAV D+CKL+FLELKAKR +RFI++KI+  Q++V+V+K+G+P  TYEDF  SLP
Sbjct: 2   ANAASGMAVHDDCKLRFLELKAKRTHRFIVYKIEEKQKQVIVEKVGEPILTYEDFAASLP 61

Query: 61  SDECRYAVFDFDFITDENVQKSKIFFIAWSPDISKVRSKMVYASSKDRFKRELDGIQFEL 120
           +DECRYA++DFDF+T EN QKSKIFFIAW PD++KVRSKM+YASSKDRFKRELDGIQ EL
Sbjct: 62  ADECRYAIYDFDFVTAENCQKSKIFFIAWCPDVAKVRSKMIYASSKDRFKRELDGIQVEL 121

Query: 121 QATDPSEMSFDIVKAR 135
           QATDP+EM  D++K+R
Sbjct: 122 QATDPTEMDLDVLKSR 137

The following BLAST results are available for this feature:

BLAST of MS017772 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022159651.1	2.9e-69	100.00	actin-depolymerizing factor 7 [Momordica charantia]	[more]
XP_008437023.1	1.0e-66	95.59	PREDICTED: actin-depolymerizing factor 7 [Cucumis melo] >KAA0043488.1 actin-depo...	[more]
XP_004152385.2	1.4e-66	95.59	actin-depolymerizing factor 7 [Cucumis sativus] >KGN50293.1 hypothetical protein...	[more]
KAG6579390.1	1.5e-65	93.38	Oxalate--CoA ligase, partial [Cucurbita argyrosperma subsp. sororia]	[more]
XP_022995817.1	5.7e-65	92.65	actin-depolymerizing factor 7 [Cucurbita maxima] >XP_023534281.1 actin-depolymer...	[more]

BLAST of MS017772 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q67ZM4	3.6e-62	85.93	Actin-depolymerizing factor 7 OS=Arabidopsis thaliana OX=3702 GN=ADF7 PE=2 SV=1	[more]
Q8LFH6	6.3e-59	82.22	Actin-depolymerizing factor 12 OS=Arabidopsis thaliana OX=3702 GN=ADF12 PE=2 SV=...	[more]
Q9LQ81	3.1e-58	80.88	Actin-depolymerizing factor 10 OS=Arabidopsis thaliana OX=3702 GN=ADF10 PE=2 SV=...	[more]
Q7XSN9	1.2e-57	80.29	Actin-depolymerizing factor 6 OS=Oryza sativa subsp. japonica OX=39947 GN=ADF6 P...	[more]
Q6EUH7	2.7e-57	78.83	Actin-depolymerizing factor 1 OS=Oryza sativa subsp. japonica OX=39947 GN=ADF1 P...	[more]

BLAST of MS017772 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1E4K0	1.4e-69	100.00	actin-depolymerizing factor 7 OS=Momordica charantia OX=3673 GN=LOC111025996 PE=...	[more]
A0A5A7TKY7	5.0e-67	95.59	Actin-depolymerizing factor 7 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_sc...	[more]
A0A1S3ATL2	5.0e-67	95.59	actin-depolymerizing factor 7 OS=Cucumis melo OX=3656 GN=LOC103482576 PE=3 SV=1	[more]
A0A0A0KKY8	6.5e-67	95.59	ADF-H domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_5G165880 PE=3 ...	[more]
A0A6J1K020	2.8e-65	92.65	actin-depolymerizing factor 7 OS=Cucurbita maxima OX=3661 GN=LOC111491240 PE=3 S...	[more]

BLAST of MS017772 vs. TAIR 10


Match Name	E-value	Identity	Description
AT4G25590.1	2.5e-63	85.93	actin depolymerizing factor 7	[more]
AT5G52360.1	4.5e-60	82.22	actin depolymerizing factor 10	[more]
AT1G01750.1	2.2e-59	80.88	actin depolymerizing factor 11	[more]
AT4G00680.1	2.7e-57	76.47	actin depolymerizing factor 8	[more]
AT5G59890.1	4.3e-55	72.79	actin depolymerizing factor 4	[more]

InterPro

Analysis Name: InterPro Annotations of Bitter gourd (TR) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR002108	Actin-depolymerising factor homology domain	SMART	SM00102	adf_2	coord: 11..136 e-value: 8.8E-55 score: 198.0
IPR002108	Actin-depolymerising factor homology domain	PFAM	PF00241	Cofilin_ADF	coord: 13..133 e-value: 4.8E-36 score: 123.3
IPR002108	Actin-depolymerising factor homology domain	PROSITE	PS51263	ADF_H	coord: 4..136 score: 36.029297
IPR029006	ADF-H/Gelsolin-like domain superfamily	GENE3D	3.40.20.10	Severin	coord: 1..135 e-value: 6.5E-51 score: 174.3
None	No IPR available	PANTHER	PTHR11913:SF92	COFILIN/ACTIN-DEPOLYMERIZING FACTOR-LIKE PROTEIN	coord: 1..136
None	No IPR available	SUPERFAMILY	55753	Actin depolymerizing proteins	coord: 2..134
IPR017904	ADF/Cofilin	PANTHER	PTHR11913	COFILIN-RELATED	coord: 1..136
IPR017904	ADF/Cofilin	CDD	cd11286	ADF_cofilin_like	coord: 5..135 e-value: 4.63834E-60 score: 179.675

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
MS017772.1	MS017772.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0030042	actin filament depolymerization
cellular_component	GO:0015629	actin cytoskeleton
molecular_function	GO:0003779	actin binding