MS017737 (gene) Bitter gourd (TR) v1

Overview


Name	MS017737
Type	gene
Organism	Momordica charantia cv. TR (Bitter gourd (TR) v1)
Description	SnoaL-like domain-containing protein
Location	scaffold373: 2027644 .. 2028871 (+)
RNA-Seq Expression	MS017737
Synteny	MS017737

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCCCTTATAAGAAGTCCTCCTCCCATCAGTTTGGGCTCCCAATCATTCAGAAATCTACCCTATACAGCCTTGCCTAAAATAACCTCATGTGTATTTCAACAAAAGAAGACCACAGTACTAAAATATGGCGACTGGATGAGGAAAACAAACAAAAGATCATCCACTGACGTTAAGCTCCGTTTCGTGCCTTCGTGTTTAACAGATGATTCTGATTCCTGCTTAGATTCAAATTCAAATCCTCCATCAGAAATGATTGAGAACTTCTACAGATGCATCAATGAAAAAAACTTAGAGGAGTTGGGCAGTTACATCTCAGAAGATTGTGTCATTGAAGACTCCTTGTTCATTGAACCATTTCAAGGGAGGAAGGTAAGAATTGTATATACTCTTGAGAGTCCGTAACTCGACTAATCTCACCAGACAACCACTTAATCCTACTGCATCTAGCGATCAAGAAAACTCGTTAGATATTAAATCCTAATTGGTTTGAAAATCATTTCCACTAAGCTCTTTACCTTTTTCATTAGCCCAAATGACTACTAGGCAAACTAATAGTAGTTCTTCCGTTGAAATGTGTAACAAAAATCTATTTTCACAAGTCCATGGAAGCTACTTGCAGGAAGCTCTGGAGTTCTTTGAAGAACTCACTCAAAGCATGGGCCGATATGTGAAGTTCAGAATTCTTAACGTCTACGAAAGTGGCACTTCCGGTGCAGGAGCAATCTGGCGCTTGGGTAGCTCTATCTAATCTATGATTTTCCCTCAACTTCATATTCTATCAGTCTAATAGATTGACAAATCTAATCTATCAATCGGCAGCATGGAAGGACATAGAGATTCCCTTCTCCAAGGGCTGCACCTTCATCAACATCAGAAATGAAAAAAGAAGAGCAATACAGTTAACTACAAATAAACTCAGCACCTGATACTTCAATTCTAATGAGAGAATGAGATCTTAATGATATGCAACTCTTTACAGGAAAGCACAAATCATAGTTGAACCACAAGTCAAAGCAGGACATTTCATCTTGGTAAATACACACAAGCCATTATTCCCAATAATTTCAAATCATTCAACGCTTAGAACAGTTTCATCTTGGTATGTACTAACAAATCTTCAATTTGTTGTTCAAATGGGACTTTGCCTATTAACTAATACCAGGCTTTACTGAAGCTTGTGACTTCATTACTCGATACATTTCCAGCAATTCCAGAATGTAAGTCG

mRNA sequence

ATGGCCCTTATAAGAAGTCCTCCTCCCATCAGTTTGGGCTCCCAATCATTCAGAAATCTACCCTATACAGCCTTGCCTAAAATAACCTCATGTGTATTTCAACAAAAGAAGACCACAGTACTAAAATATGGCGACTGGATGAGGAAAACAAACAAAAGATCATCCACTGACGTTAAGCTCCGTTTCGTGCCTTCGTGTTTAACAGATGATTCTGATTCCTGCTTAGATTCAAATTCAAATCCTCCATCAGAAATGATTGAGAACTTCTACAGATGCATCAATGAAAAAAACTTAGAGGAGTTGGGCAGTTACATCTCAGAAGATTGTGTCATTGAAGACTCCTTGTTCATTGAACCATTTCAAGGGAGGAAGGAAGCTCTGGAGTTCTTTGAAGAACTCACTCAAAGCATGGGCCGATATGTGAAGTTCAGAATTCTTAACGTCTACGAAAGTGGCACTTCCGGTGCAGGAGCAATCTGGCGCTTGGCATGGAAGGACATAGAGATTCCCTTCTCCAAGGGCTGCACCTTCATCAACATCAGAAATGAAAAAAGAAGAGCAATACAGAAAGCACAAATCATAGTTGAACCACAAGTCAAAGCAGGACATTTCATCTTGGCTTTACTGAAGCTTGTGACTTCATTACTCGATACATTTCCAGCAATTCCAGAATGTAAGTCG

Coding sequence (CDS)

ATGGCCCTTATAAGAAGTCCTCCTCCCATCAGTTTGGGCTCCCAATCATTCAGAAATCTACCCTATACAGCCTTGCCTAAAATAACCTCATGTGTATTTCAACAAAAGAAGACCACAGTACTAAAATATGGCGACTGGATGAGGAAAACAAACAAAAGATCATCCACTGACGTTAAGCTCCGTTTCGTGCCTTCGTGTTTAACAGATGATTCTGATTCCTGCTTAGATTCAAATTCAAATCCTCCATCAGAAATGATTGAGAACTTCTACAGATGCATCAATGAAAAAAACTTAGAGGAGTTGGGCAGTTACATCTCAGAAGATTGTGTCATTGAAGACTCCTTGTTCATTGAACCATTTCAAGGGAGGAAGGAAGCTCTGGAGTTCTTTGAAGAACTCACTCAAAGCATGGGCCGATATGTGAAGTTCAGAATTCTTAACGTCTACGAAAGTGGCACTTCCGGTGCAGGAGCAATCTGGCGCTTGGCATGGAAGGACATAGAGATTCCCTTCTCCAAGGGCTGCACCTTCATCAACATCAGAAATGAAAAAAGAAGAGCAATACAGAAAGCACAAATCATAGTTGAACCACAAGTCAAAGCAGGACATTTCATCTTGGCTTTACTGAAGCTTGTGACTTCATTACTCGATACATTTCCAGCAATTCCAGAATGTAAGTCG

Protein sequence

MALIRSPPPISLGSQSFRNLPYTALPKITSCVFQQKKTTVLKYGDWMRKTNKRSSTDVKLRFVPSCLTDDSDSCLDSNSNPPSEMIENFYRCINEKNLEELGSYISEDCVIEDSLFIEPFQGRKEALEFFEELTQSMGRYVKFRILNVYESGTSGAGAIWRLAWKDIEIPFSKGCTFINIRNEKRRAIQKAQIIVEPQVKAGHFILALLKLVTSLLDTFPAIPECKS

Homology

[Close]

BLAST of MS017737 vs. NCBI nr
Match: XP_022156726.1 (uncharacterized protein LOC111023569 isoform X1 [Momordica charantia])

HSP 1 Score: 444.5 bits (1142), Expect = 5.5e-121
Identity = 221/224 (98.66%), Postives = 222/224 (99.11%), Query Frame = 0


Query: 1   MALIRSPPPISLGSQSFRNLPYTALPKITSCVFQQKKTTVLKYGDWMRKTNKRSSTDVKL 60
           MALIRSPPPISLGSQSFRNLPYTALPKI+SCVFQQKKTTVLKYGDWMRKTNKRSSTDVKL
Sbjct: 1   MALIRSPPPISLGSQSFRNLPYTALPKISSCVFQQKKTTVLKYGDWMRKTNKRSSTDVKL 60

Query: 61  RFVPSCLTDDSDSCLDSNSNPPSEMIENFYRCINEKNLEELGSYISEDCVIEDSLFIEPF 120
           RFVPSCL DDSDSCLDSNSNP SEMIENFYRCINEKNLEELGSYISEDCVIEDSLFIEPF
Sbjct: 61  RFVPSCLPDDSDSCLDSNSNPSSEMIENFYRCINEKNLEELGSYISEDCVIEDSLFIEPF 120

Query: 121 QGRKEALEFFEELTQSMGRYVKFRILNVYESGTSGAGAIWRLAWKDIEIPFSKGCTFINI 180
           QGRKEALEFFEELTQSMGRYVKFRILNVYESGTSGAGAIWRLAWKDIEIPFSKGCTFINI
Sbjct: 121 QGRKEALEFFEELTQSMGRYVKFRILNVYESGTSGAGAIWRLAWKDIEIPFSKGCTFINI 180

Query: 181 RNEKRRAIQKAQIIVEPQVKAGHFILALLKLVTSLLDTFPAIPE 225
           RNEKRRAIQKAQIIVEPQVKAGHFILALLKLVTSLLDTFPAIPE
Sbjct: 181 RNEKRRAIQKAQIIVEPQVKAGHFILALLKLVTSLLDTFPAIPE 224

[Close]

BLAST of MS017737 vs. NCBI nr
Match: XP_022156730.1 (uncharacterized protein LOC111023569 isoform X2 [Momordica charantia])

HSP 1 Score: 444.5 bits (1142), Expect = 5.5e-121
Identity = 221/224 (98.66%), Postives = 222/224 (99.11%), Query Frame = 0


Query: 1   MALIRSPPPISLGSQSFRNLPYTALPKITSCVFQQKKTTVLKYGDWMRKTNKRSSTDVKL 60
           MALIRSPPPISLGSQSFRNLPYTALPKI+SCVFQQKKTTVLKYGDWMRKTNKRSSTDVKL
Sbjct: 1   MALIRSPPPISLGSQSFRNLPYTALPKISSCVFQQKKTTVLKYGDWMRKTNKRSSTDVKL 60

Query: 61  RFVPSCLTDDSDSCLDSNSNPPSEMIENFYRCINEKNLEELGSYISEDCVIEDSLFIEPF 120
           RFVPSCL DDSDSCLDSNSNP SEMIENFYRCINEKNLEELGSYISEDCVIEDSLFIEPF
Sbjct: 61  RFVPSCLPDDSDSCLDSNSNPSSEMIENFYRCINEKNLEELGSYISEDCVIEDSLFIEPF 120

Query: 121 QGRKEALEFFEELTQSMGRYVKFRILNVYESGTSGAGAIWRLAWKDIEIPFSKGCTFINI 180
           QGRKEALEFFEELTQSMGRYVKFRILNVYESGTSGAGAIWRLAWKDIEIPFSKGCTFINI
Sbjct: 121 QGRKEALEFFEELTQSMGRYVKFRILNVYESGTSGAGAIWRLAWKDIEIPFSKGCTFINI 180

Query: 181 RNEKRRAIQKAQIIVEPQVKAGHFILALLKLVTSLLDTFPAIPE 225
           RNEKRRAIQKAQIIVEPQVKAGHFILALLKLVTSLLDTFPAIPE
Sbjct: 181 RNEKRRAIQKAQIIVEPQVKAGHFILALLKLVTSLLDTFPAIPE 224

[Close]

BLAST of MS017737 vs. NCBI nr
Match: XP_022156737.1 (uncharacterized protein LOC111023569 isoform X3 [Momordica charantia] >XP_022156743.1 uncharacterized protein LOC111023569 isoform X3 [Momordica charantia])

HSP 1 Score: 411.8 bits (1057), Expect = 3.9e-111
Identity = 203/206 (98.54%), Postives = 204/206 (99.03%), Query Frame = 0


Query: 1   MALIRSPPPISLGSQSFRNLPYTALPKITSCVFQQKKTTVLKYGDWMRKTNKRSSTDVKL 60
           MALIRSPPPISLGSQSFRNLPYTALPKI+SCVFQQKKTTVLKYGDWMRKTNKRSSTDVKL
Sbjct: 1   MALIRSPPPISLGSQSFRNLPYTALPKISSCVFQQKKTTVLKYGDWMRKTNKRSSTDVKL 60

Query: 61  RFVPSCLTDDSDSCLDSNSNPPSEMIENFYRCINEKNLEELGSYISEDCVIEDSLFIEPF 120
           RFVPSCL DDSDSCLDSNSNP SEMIENFYRCINEKNLEELGSYISEDCVIEDSLFIEPF
Sbjct: 61  RFVPSCLPDDSDSCLDSNSNPSSEMIENFYRCINEKNLEELGSYISEDCVIEDSLFIEPF 120

Query: 121 QGRKEALEFFEELTQSMGRYVKFRILNVYESGTSGAGAIWRLAWKDIEIPFSKGCTFINI 180
           QGRKEALEFFEELTQSMGRYVKFRILNVYESGTSGAGAIWRLAWKDIEIPFSKGCTFINI
Sbjct: 121 QGRKEALEFFEELTQSMGRYVKFRILNVYESGTSGAGAIWRLAWKDIEIPFSKGCTFINI 180

Query: 181 RNEKRRAIQKAQIIVEPQVKAGHFIL 207
           RNEKRRAIQKAQIIVEPQVKAGHFIL
Sbjct: 181 RNEKRRAIQKAQIIVEPQVKAGHFIL 206

[Close]

BLAST of MS017737 vs. NCBI nr
Match: XP_038906943.1 (uncharacterized protein LOC120092809 [Benincasa hispida])

HSP 1 Score: 287.3 bits (734), Expect = 1.1e-73
Identity = 153/229 (66.81%), Postives = 176/229 (76.86%), Query Frame = 0


Query: 1   MALIRSPPP---ISL-GSQSFRNLPYTALPKITSCVFQQKKTTVLKYGDW-MRKTNKRSS 60
           M+LI SPPP   ++L GSQS R    T L K +SC+ QQKK     YG+   +KTN R S
Sbjct: 1   MSLIISPPPPQAVNLGGSQSLRRFSCTFLTKRSSCILQQKK----NYGNCKKKKTNNRLS 60

Query: 61  TDVKLRFVPSCLTDDSDSCLDSNSNPPSEMIENFYRCINEKNLEELGSYISEDCVIEDSL 120
           TDVKL FV SCL DDS S LDS SN PSEMIE FY+CINEKNL+EL SYISEDC IEDSL
Sbjct: 61  TDVKLHFVSSCLKDDSFSRLDSRSNSPSEMIERFYKCINEKNLKELSSYISEDCHIEDSL 120

Query: 121 FIEPFQGRKEALEFFEELTQSMGRYVKFRILNVYESGTSGAGAIWRLAWKDIEIPFSKGC 180
           F+EPF G+K AL FFEELT SMG  VKFRI N+YE   S  GAIW L WK++EIPF+KGC
Sbjct: 121 FVEPFIGKKAALRFFEELTHSMGPDVKFRIHNIYERRVSSVGAIWHLEWKNMEIPFTKGC 180

Query: 181 TFINIRNEKRRAIQKAQIIVEPQVKAGHFILALLKLVTSLLDTFPAIPE 225
           TFI+IRNE+R+ IQKAQII+EPQ+KAGH ILA++KLVT LL  +PAIPE
Sbjct: 181 TFIDIRNEERKTIQKAQIIIEPQIKAGHLILAIMKLVTLLLAKYPAIPE 225

[Close]

BLAST of MS017737 vs. NCBI nr
Match: XP_023550969.1 (uncharacterized protein LOC111808949 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 267.3 bits (682), Expect = 1.2e-67
Identity = 143/224 (63.84%), Postives = 168/224 (75.00%), Query Frame = 0


Query: 1   MALIRSPPP--ISLGSQSFRNLPYTALPKITSCVFQQKKTTVLKYGDWMRKTNKRSSTDV 60
           MALI SPPP  ++LGSQ FR   YT++PK  S +FQQKK         +RKT+   +T+V
Sbjct: 1   MALITSPPPQALTLGSQPFRTFAYTSIPKRPSYLFQQKK---------LRKTSYTLATNV 60

Query: 61  KLRFVPSCLTDDSDSCLDSNSNPPSEMIENFYRCINEKNLEELGSYISEDCVIEDSLFIE 120
           K RFV SCL D S   LDS S  PSEM+   Y CINEK L+EL SY+SEDC+IEDSLF E
Sbjct: 61  KPRFVLSCLKDGSGCSLDSCSKSPSEMVRKLYECINEKKLKELSSYMSEDCLIEDSLFDE 120

Query: 121 PFQGRKEALEFFEELTQSMGRYVKFRILNVYESGTSGAGAIWRLAWKDIEIPFSKGCTFI 180
           PF G++ AL+FFEELTQSMGR VKFR  NVYESGTS AGA W L WK+ +IPF+KGCTFI
Sbjct: 121 PFIGKEAALKFFEELTQSMGRDVKFRFRNVYESGTSRAGATWHLVWKNTKIPFTKGCTFI 180

Query: 181 NIRNEKRRAIQKAQIIVEPQVKAGHFILALLKLVTSLLDTFPAI 223
           +I NE +R IQKAQII+EPQVKAGH IL ++KLVTSLL  +PAI
Sbjct: 181 DINNE-QRTIQKAQIIIEPQVKAGHLILGMMKLVTSLLAQYPAI 214

[Close]

BLAST of MS017737 vs. ExPASy TrEMBL
Match: A0A6J1DR56 (uncharacterized protein LOC111023569 isoform X2 OS=Momordica charantia OX=3673 GN=LOC111023569 PE=4 SV=1)

HSP 1 Score: 444.5 bits (1142), Expect = 2.6e-121
Identity = 221/224 (98.66%), Postives = 222/224 (99.11%), Query Frame = 0


Query: 1   MALIRSPPPISLGSQSFRNLPYTALPKITSCVFQQKKTTVLKYGDWMRKTNKRSSTDVKL 60
           MALIRSPPPISLGSQSFRNLPYTALPKI+SCVFQQKKTTVLKYGDWMRKTNKRSSTDVKL
Sbjct: 1   MALIRSPPPISLGSQSFRNLPYTALPKISSCVFQQKKTTVLKYGDWMRKTNKRSSTDVKL 60

Query: 61  RFVPSCLTDDSDSCLDSNSNPPSEMIENFYRCINEKNLEELGSYISEDCVIEDSLFIEPF 120
           RFVPSCL DDSDSCLDSNSNP SEMIENFYRCINEKNLEELGSYISEDCVIEDSLFIEPF
Sbjct: 61  RFVPSCLPDDSDSCLDSNSNPSSEMIENFYRCINEKNLEELGSYISEDCVIEDSLFIEPF 120

Query: 121 QGRKEALEFFEELTQSMGRYVKFRILNVYESGTSGAGAIWRLAWKDIEIPFSKGCTFINI 180
           QGRKEALEFFEELTQSMGRYVKFRILNVYESGTSGAGAIWRLAWKDIEIPFSKGCTFINI
Sbjct: 121 QGRKEALEFFEELTQSMGRYVKFRILNVYESGTSGAGAIWRLAWKDIEIPFSKGCTFINI 180

Query: 181 RNEKRRAIQKAQIIVEPQVKAGHFILALLKLVTSLLDTFPAIPE 225
           RNEKRRAIQKAQIIVEPQVKAGHFILALLKLVTSLLDTFPAIPE
Sbjct: 181 RNEKRRAIQKAQIIVEPQVKAGHFILALLKLVTSLLDTFPAIPE 224

[Close]

BLAST of MS017737 vs. ExPASy TrEMBL
Match: A0A6J1DVV2 (uncharacterized protein LOC111023569 isoform X1 OS=Momordica charantia OX=3673 GN=LOC111023569 PE=4 SV=1)

HSP 1 Score: 444.5 bits (1142), Expect = 2.6e-121
Identity = 221/224 (98.66%), Postives = 222/224 (99.11%), Query Frame = 0


Query: 1   MALIRSPPPISLGSQSFRNLPYTALPKITSCVFQQKKTTVLKYGDWMRKTNKRSSTDVKL 60
           MALIRSPPPISLGSQSFRNLPYTALPKI+SCVFQQKKTTVLKYGDWMRKTNKRSSTDVKL
Sbjct: 1   MALIRSPPPISLGSQSFRNLPYTALPKISSCVFQQKKTTVLKYGDWMRKTNKRSSTDVKL 60

Query: 61  RFVPSCLTDDSDSCLDSNSNPPSEMIENFYRCINEKNLEELGSYISEDCVIEDSLFIEPF 120
           RFVPSCL DDSDSCLDSNSNP SEMIENFYRCINEKNLEELGSYISEDCVIEDSLFIEPF
Sbjct: 61  RFVPSCLPDDSDSCLDSNSNPSSEMIENFYRCINEKNLEELGSYISEDCVIEDSLFIEPF 120

Query: 121 QGRKEALEFFEELTQSMGRYVKFRILNVYESGTSGAGAIWRLAWKDIEIPFSKGCTFINI 180
           QGRKEALEFFEELTQSMGRYVKFRILNVYESGTSGAGAIWRLAWKDIEIPFSKGCTFINI
Sbjct: 121 QGRKEALEFFEELTQSMGRYVKFRILNVYESGTSGAGAIWRLAWKDIEIPFSKGCTFINI 180

Query: 181 RNEKRRAIQKAQIIVEPQVKAGHFILALLKLVTSLLDTFPAIPE 225
           RNEKRRAIQKAQIIVEPQVKAGHFILALLKLVTSLLDTFPAIPE
Sbjct: 181 RNEKRRAIQKAQIIVEPQVKAGHFILALLKLVTSLLDTFPAIPE 224

[Close]

BLAST of MS017737 vs. ExPASy TrEMBL
Match: A0A6J1DSR1 (uncharacterized protein LOC111023569 isoform X3 OS=Momordica charantia OX=3673 GN=LOC111023569 PE=4 SV=1)

HSP 1 Score: 411.8 bits (1057), Expect = 1.9e-111
Identity = 203/206 (98.54%), Postives = 204/206 (99.03%), Query Frame = 0


Query: 1   MALIRSPPPISLGSQSFRNLPYTALPKITSCVFQQKKTTVLKYGDWMRKTNKRSSTDVKL 60
           MALIRSPPPISLGSQSFRNLPYTALPKI+SCVFQQKKTTVLKYGDWMRKTNKRSSTDVKL
Sbjct: 1   MALIRSPPPISLGSQSFRNLPYTALPKISSCVFQQKKTTVLKYGDWMRKTNKRSSTDVKL 60

Query: 61  RFVPSCLTDDSDSCLDSNSNPPSEMIENFYRCINEKNLEELGSYISEDCVIEDSLFIEPF 120
           RFVPSCL DDSDSCLDSNSNP SEMIENFYRCINEKNLEELGSYISEDCVIEDSLFIEPF
Sbjct: 61  RFVPSCLPDDSDSCLDSNSNPSSEMIENFYRCINEKNLEELGSYISEDCVIEDSLFIEPF 120

Query: 121 QGRKEALEFFEELTQSMGRYVKFRILNVYESGTSGAGAIWRLAWKDIEIPFSKGCTFINI 180
           QGRKEALEFFEELTQSMGRYVKFRILNVYESGTSGAGAIWRLAWKDIEIPFSKGCTFINI
Sbjct: 121 QGRKEALEFFEELTQSMGRYVKFRILNVYESGTSGAGAIWRLAWKDIEIPFSKGCTFINI 180

Query: 181 RNEKRRAIQKAQIIVEPQVKAGHFIL 207
           RNEKRRAIQKAQIIVEPQVKAGHFIL
Sbjct: 181 RNEKRRAIQKAQIIVEPQVKAGHFIL 206

[Close]

BLAST of MS017737 vs. ExPASy TrEMBL
Match: A0A6J1I4H1 (uncharacterized protein LOC111469081 OS=Cucurbita maxima OX=3661 GN=LOC111469081 PE=4 SV=1)

HSP 1 Score: 265.8 bits (678), Expect = 1.7e-67
Identity = 144/224 (64.29%), Postives = 168/224 (75.00%), Query Frame = 0


Query: 1   MALIRSPPP--ISLGSQSFRNLPYTALPKITSCVFQQKKTTVLKYGDWMRKTNKRSSTDV 60
           MALI SPPP  ++LGSQ FR   YT++PK  S +FQQKK         +RKT+    TDV
Sbjct: 1   MALITSPPPQALTLGSQPFRTFAYTSIPKKPSSLFQQKK---------LRKTSYTLVTDV 60

Query: 61  KLRFVPSCLTDDSDSCLDSNSNPPSEMIENFYRCINEKNLEELGSYISEDCVIEDSLFIE 120
           K RFV SCL D S   LDS SN PSEM++ FY CINEK L+EL SYISEDC+IEDSLF E
Sbjct: 61  KPRFVLSCLKDGSVCSLDSCSNSPSEMVKKFYECINEKKLKELSSYISEDCLIEDSLFDE 120

Query: 121 PFQGRKEALEFFEELTQSMGRYVKFRILNVYESGTSGAGAIWRLAWKDIEIPFSKGCTFI 180
            F G++ AL+FF+ELTQSMG  VKFR  NVYESGTS AGA W L WK+ +IPF+KGCTFI
Sbjct: 121 AFIGKEAALKFFKELTQSMGPDVKFRFRNVYESGTSRAGATWHLVWKNTKIPFTKGCTFI 180

Query: 181 NIRNEKRRAIQKAQIIVEPQVKAGHFILALLKLVTSLLDTFPAI 223
           +I NE+ R IQKAQII+EPQVKAGH IL ++KLVTSLL  +PAI
Sbjct: 181 DINNEE-RTIQKAQIIMEPQVKAGHLILGMMKLVTSLLAQYPAI 214

[Close]

BLAST of MS017737 vs. ExPASy TrEMBL
Match: A0A6J1ELY0 (uncharacterized protein LOC111435747 OS=Cucurbita moschata OX=3662 GN=LOC111435747 PE=4 SV=1)

HSP 1 Score: 261.2 bits (666), Expect = 4.2e-66
Identity = 140/224 (62.50%), Postives = 166/224 (74.11%), Query Frame = 0


Query: 1   MALIRSPPP--ISLGSQSFRNLPYTALPKITSCVFQQKKTTVLKYGDWMRKTNKRSSTDV 60
           MALI SPPP  ++LGSQ FR   YT++PK  S +FQQKK         +RKT+   +TDV
Sbjct: 1   MALITSPPPQALTLGSQPFRTFAYTSIPKRPSYLFQQKK---------LRKTSYTLATDV 60

Query: 61  KLRFVPSCLTDDSDSCLDSNSNPPSEMIENFYRCINEKNLEELGSYISEDCVIEDSLFIE 120
           K RFV SCL D S   LDS SN PSEM++  Y CINEK L+EL SY+SEDC+IEDSLF E
Sbjct: 61  KPRFVSSCLKDGSVCSLDSCSNSPSEMVKKLYECINEKKLKELSSYMSEDCLIEDSLFDE 120

Query: 121 PFQGRKEALEFFEELTQSMGRYVKFRILNVYESGTSGAGAIWRLAWKDIEIPFSKGCTFI 180
            F G++ AL+FF+ELTQSMG  VKFR  NVYESG S AG  W L WK+ +IPF+KGCTFI
Sbjct: 121 AFIGKEAALKFFKELTQSMGPDVKFRFRNVYESGASRAGVTWHLVWKNTKIPFTKGCTFI 180

Query: 181 NIRNEKRRAIQKAQIIVEPQVKAGHFILALLKLVTSLLDTFPAI 223
           +I NE +R IQKAQII+EPQVKAGH IL ++KLVTSLL  +PAI
Sbjct: 181 HINNE-QRTIQKAQIIIEPQVKAGHLILGMMKLVTSLLAQYPAI 214

[Close]

BLAST of MS017737 vs. TAIR 10
Match: AT5G41470.1 (Nuclear transport factor 2 (NTF2) family protein )

HSP 1 Score: 132.5 bits (332), Expect = 4.3e-31
Identity = 69/154 (44.81%), Postives = 98/154 (63.64%), Query Frame = 0


Query: 73  SCLDSNSNPPSEM-----IENFYRCINEKNLEELGSYISEDCVIEDSLFIEPFQGRKEAL 132
           SCLD  ++ P+++     +  FY  INEKN ++L S IS DC I+D  F +PF+G++EA+
Sbjct: 61  SCLDRPNSRPNQISGYDAVMKFYSSINEKNQDQLSSCISSDCFIDDFSFPKPFRGKQEAM 120

Query: 133 EFFEELTQSMGRYVKFRILNVYESGTSGAGAIWRLAWKDIEIPFSKGCTFINIRNE-KRR 192
           EFFEEL +SMG+ VKF + NV E     A   W L WK  +IPF++GC+F    +E  R 
Sbjct: 121 EFFEELVKSMGQNVKFCVENVCEGDGHSAAVNWHLEWKGRKIPFTRGCSFYEFIDEGGRL 180

Query: 193 AIQKAQIIVEPQVKAGHFILALLKLVTSLLDTFP 221
            I+ A+I++E  +K G   L+LLK +T L D FP
Sbjct: 181 VIRNARILIESPIKPGGITLSLLKNITFLFDEFP 214

[Close]

BLAST of MS017737 vs. TAIR 10
Match: AT1G71480.1 (Nuclear transport factor 2 (NTF2) family protein )

HSP 1 Score: 104.0 bits (258), Expect = 1.6e-22
Identity = 53/143 (37.06%), Postives = 80/143 (55.94%), Query Frame = 0


Query: 83  SEMIENFYRCINEKNLEELGSYISEDCVIEDSLFIEPFQGRKEALEFFEELTQSMGRYVK 142
           SE++ +FY  +N  +L  +   I++DCV ED +F  PF GRK  L+FF +  +S    ++
Sbjct: 72  SEVVSSFYAAVNVHDLSSVTDLIAQDCVYEDLVFSSPFVGRKAILDFFGKFIESTSTDLQ 131

Query: 143 FRILNVYESGTSGAGAIWRLAWKDIEIPFSKGCTFINIR-NEKRRAIQKAQIIVEPQVKA 202
           F I ++    +S  G  W L WK    PFSKGC+F  +   + +R I   +  VEP +K 
Sbjct: 132 FVIDDISTEDSSAVGVSWHLEWKGKNFPFSKGCSFYRLEVIDGKRQIVYGRDCVEPAIKP 191

Query: 203 GHFILALLKLVTSLLDTFPAIPE 225
           G  +LA +K VT LL  FP + +
Sbjct: 192 GETVLAAIKGVTWLLQKFPQLAD 214

The following BLAST results are available for this feature:

BLAST of MS017737 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022156726.1	5.5e-121	98.66	uncharacterized protein LOC111023569 isoform X1 [Momordica charantia]	[more]
XP_022156730.1	5.5e-121	98.66	uncharacterized protein LOC111023569 isoform X2 [Momordica charantia]	[more]
XP_022156737.1	3.9e-111	98.54	uncharacterized protein LOC111023569 isoform X3 [Momordica charantia] >XP_022156...	[more]
XP_038906943.1	1.1e-73	66.81	uncharacterized protein LOC120092809 [Benincasa hispida]	[more]
XP_023550969.1	1.2e-67	63.84	uncharacterized protein LOC111808949 [Cucurbita pepo subsp. pepo]	[more]

BLAST of MS017737 vs. NCBI nr


Match Name	E-value	Identity	Description

BLAST of MS017737 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1DR56	2.6e-121	98.66	uncharacterized protein LOC111023569 isoform X2 OS=Momordica charantia OX=3673 G...	[more]
A0A6J1DVV2	2.6e-121	98.66	uncharacterized protein LOC111023569 isoform X1 OS=Momordica charantia OX=3673 G...	[more]
A0A6J1DSR1	1.9e-111	98.54	uncharacterized protein LOC111023569 isoform X3 OS=Momordica charantia OX=3673 G...	[more]
A0A6J1I4H1	1.7e-67	64.29	uncharacterized protein LOC111469081 OS=Cucurbita maxima OX=3661 GN=LOC111469081...	[more]
A0A6J1ELY0	4.2e-66	62.50	uncharacterized protein LOC111435747 OS=Cucurbita moschata OX=3662 GN=LOC1114357...	[more]

BLAST of MS017737 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G41470.1	4.3e-31	44.81	Nuclear transport factor 2 (NTF2) family protein	[more]
AT1G71480.1	1.6e-22	37.06	Nuclear transport factor 2 (NTF2) family protein	[more]

InterPro

Analysis Name: InterPro Annotations of Bitter gourd (TR) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	GENE3D	3.10.450.50		coord: 72..188 e-value: 9.3E-11 score: 43.6
None	No IPR available	PANTHER	PTHR33698	NUCLEAR TRANSPORT FACTOR 2 (NTF2)-LIKE PROTEIN	coord: 15..225
None	No IPR available	PANTHER	PTHR33698:SF1	NUCLEAR TRANSPORT FACTOR 2 (NTF2) FAMILY PROTEIN	coord: 15..225
None	No IPR available	CDD	cd00531	NTF2_like	coord: 83..148 e-value: 0.0017732 score: 35.1832
IPR037401	SnoaL-like domain	PFAM	PF12680	SnoaL_2	coord: 87..184 e-value: 6.5E-8 score: 33.1
IPR032710	NTF2-like domain superfamily	SUPERFAMILY	54427	NTF2-like	coord: 83..167

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
MS017737.1	MS017737.1	mRNA