MS017716 (gene) Bitter gourd (TR) v1

Overview
NameMS017716
Typegene
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
DescriptionUnknown protein
Locationscaffold373: 1839011 .. 1839132 (-)
RNA-Seq ExpressionMS017716
SyntenyMS017716
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
AAACAAACAGAAACGGTCCCTGGTCTTATCTTGACTTACTGCACAGTGGTGACTTGTGTTGTAGTGTCATTTCGCCATTAAGATGGCCTACCCCTTTTGTTTTCTGTAGGGGAAATGATATG

mRNA sequence

AAACAAACAGAAACGGTCCCTGGTCTTATCTTGACTTACTGCACAGTGGTGACTTGTGTTGTAGTCATTTCGCCATTAAGATGGCCTACCCCTTTTGTTTTCTGTAGGGGAAATGATATG

Coding sequence (CDS)

AAACAAACAGAAACGGTCCCTGGTCTTATCTTGACTTACTGCACAGTGGTGACTTGTGTTGTAGTCATTTCGCCATTAAGATGGCCTACCCCTTTTGTTTTCTGTAGGGGAAATGATATG

Protein sequence

KQTETVPGLILTYCTVVTCVVVISPLRWPTPFVFCRGNDM
Homology
[Close]
BLAST of MS017716 vs. NCBI nr
Match: KGN50091.1 (hypothetical protein Csa_000663 [Cucumis sativus])

HSP 1 Score: 58.9 bits (141), Expect = 1.1e-05
Identity = 31/43 (72.09%), Postives = 33/43 (76.74%), Query Frame = 0 

Query: 1  KQTETVPGLILTYCTVVTCVV---VISPLRWPTPFVFCRGNDM 41
          KQTETVP LILTYC++ TCVV   VISPLRWPT  VF   NDM
Sbjct: 19 KQTETVPCLILTYCSMETCVVDYSVISPLRWPTSLVFKWRNDM 61

[Close]
BLAST of MS017716 vs. ExPASy TrEMBL
Match: A0A0A0KQW2 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G153060 PE=4 SV=1)

HSP 1 Score: 58.9 bits (141), Expect = 5.5e-06
Identity = 31/43 (72.09%), Postives = 33/43 (76.74%), Query Frame = 0 

Query: 1  KQTETVPGLILTYCTVVTCVV---VISPLRWPTPFVFCRGNDM 41
          KQTETVP LILTYC++ TCVV   VISPLRWPT  VF   NDM
Sbjct: 19 KQTETVPCLILTYCSMETCVVDYSVISPLRWPTSLVFKWRNDM 61

The following BLAST results are available for this feature:
BLAST of MS017716 vs. NCBI nr
Match NameE-valueIdentityDescription
KGN50091.11.1e-0572.09hypothetical protein Csa_000663 [Cucumis sativus][more]
BLAST of MS017716 vs. NCBI nr
Match NameE-valueIdentityDescription
BLAST of MS017716 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A0A0KQW25.5e-0672.09Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G153060 PE=4 SV=1[more]
BLAST of MS017716 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
MS017716.1MS017716.1mRNA