MS017660 (gene) Bitter gourd (TR) v1

Overview


Name	MS017660
Type	gene
Organism	Momordica charantia cv. TR (Bitter gourd (TR) v1)
Description	Zinc finger matrin-type protein 1, putative isoform 1
Location	scaffold373: 1255893 .. 1258004 (-)
RNA-Seq Expression	MS017660
Synteny	MS017660

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGATTTCTCTAGCTTATGCTTCTCTATCATCCTCCCCTTCCAATTTGTCTTCTCTGAAGCTTCGTCTCCCCAGACCGCCTTCCACCTTCTCAACATCCCTCTCCAATCTCAAATCCTTCAATCCTTGCGACAAAGCAGCTTCCGACCAGGTAAAATTTTTCTATGCTTTGTGTTATTCTTTTTCTGATTGTTTGATTGGCCGCTGAATGAGAGAATTAACCCCACTTTGATCACAGAAGAGGATTGGGAATGGGGTTTGTAGGGCGGACTTGGGGAACGACGGGCCTTTTGCCGTTGCGATCGGGGCCTGCATTCTCAGTTCGTTTGTTTTTCCGGTAGCTGGCGGTGGTTCCGATGATGAGAGCGATGCCGTCATTGATTCCACCGATACCAGGTTCGCTGTCATGGGTATCATTAGCTTTATCCCCTACTTCAACTGGCTGGTATGTATGTTTCAGACTTTTCGGTTCAATTTACTTTTATTCAGATGTTATTTCATCTTCTTCTTTCGTTTAATTGGATAGAGTTGGGTTTTTGCGTGGCTTGATTCTGGGAGAAGGCTTTATGCTGTGTATGCACTCGTGTATTTGGTCCCTTATCTAAGGTGATTTCCAATTCTTAGATTATTCTCGTTTTTGTTCCCTTCGAAGCTCAGAAATTCCTAGTTTCGAATTCATTTCTAGCTGTATCAGTGAACTAGTTGTCTAAATTTCTAAGAACTCTAAATAAAGAAGAAAAAAGAAAACAAGTAGTGTGATATGAAAAGAGTAGAATGTGCCAGAATGAAGATCATGAGTTTTATTTCATTTTTTAAGAAGTTACAATAACAGGCTCAGTGCCTCAGTAGCGTCCTTATCAAAATTCAATGGACAAGGGGTAATGAAGAACATTTCATTTTGTTATTAGTGAGTATTTTGTGCTCTGGAAAAAGTTAAGAGGTATGAAGAAGCCCTTGTAGAGTGCTTTTTGAAGCAGATAGTTCACAGTGCTCATTCTATAGATACTAGAAAAACCAAAGAGAATGAAATTTCAGATTAGTCAATTGAAATTGAAGAACCACATTCCGACCTAGCCGCAAATCCCTTTTATGTCAAAGTGGTTGTTAGGAAAGCACTTAAAATCACTTTTAACAGTATAGAGCCAAACATCACAGTAATTTGTTATTTAGCACTTTCACTAAAGACTCGAGTACTTATGCTAATTTCCTTATTTTAAAAGCATTCCCAGTAACATCTTTTGTCATCTTCATGATGATCACTTCCTGTTAGGACGTTTCAACCTTCAGTTGTGTGGATTTGTTTAGAGCTAAAGCATTTCACCATCCTTCTGGCTAATTGTTGTGTGTTTGAACTTTTAGCCATAGCTAACAATGGAGATAAAAGAAATGAATTTTGTTCATCATTTAAATAATATACACAGCCATCATTTCATTTTTCTCACCATAATTTGTTATTCCCTTATTAGGTCAAATTTATCTCTATCCCCTGAAGAGAGTTGGCTTCCTATTGCCAGTATACTTCTCTGCATTATTCACATTCAGGTATCTTGAGAAATTTCCTGCTTATTAATTGAACTGTTTACCAGAGGTTTTGCAAAATGCTGCCCTGGACATCTTGTTCCAAAACATTTTTGAACGCCAACCCATACTGTCATATTGAAATATTGTAGCATTGGCTTGTTTCCATATGCATTTTTTGTTTTCATTCACAACTTGGCATTTACTTGTAGCTTGAAGTGAGCATTAGAAATGGAGATATCCAACCCTTCCAAATATTTGGAAAAACTTCCAAGAAAATTTCTTCAACTACAAGAGGGAGAGACCATTTCAAGGGGTCCCAAGGACCACCCGAAGAGGTAAACTATACTACATAGACAAAGGCAACATACACGTGTTTATACATAATTCATTGTTCGATCTAGTTATATTTGTAATCTGCGTCTGATATGAGTAGTCTTACTTTACATTCAAGAGTGGAGAAAAAGAGGACATGAAGCTGCCATCAATTCAAGAACAATTAAGAGATGAGATTAGAAGATGGGGAGATTCTAAAGAGACATTAGATCATGAACAATCAAATGGAGAATGGGATGATGAACAGAGGAGAAAACAT

mRNA sequence

ATGATTTCTCTAGCTTATGCTTCTCTATCATCCTCCCCTTCCAATTTGTCTTCTCTGAAGCTTCGTCTCCCCAGACCGCCTTCCACCTTCTCAACATCCCTCTCCAATCTCAAATCCTTCAATCCTTGCGACAAAGCAGCTTCCGACCAGAAGAGGATTGGGAATGGGGTTTGTAGGGCGGACTTGGGGAACGACGGGCCTTTTGCCGTTGCGATCGGGGCCTGCATTCTCAGTTCGTTTGTTTTTCCGGTAGCTGGCGGTGGTTCCGATGATGAGAGCGATGCCGTCATTGATTCCACCGATACCAGGTTCGCTGTCATGGGTATCATTAGCTTTATCCCCTACTTCAACTGGCTGAGTTGGGTTTTTGCGTGGCTTGATTCTGGGAGAAGGCTTTATGCTGTGTATGCACTCGTGTATTTGGTCCCTTATCTAAGGTCAAATTTATCTCTATCCCCTGAAGAGAGTTGGCTTCCTATTGCCAGTATACTTCTCTGCATTATTCACATTCAGCTTGAAGTGAGCATTAGAAATGGAGATATCCAACCCTTCCAAATATTTGGAAAAACTTCCAAGAAAATTTCTTCAACTACAAGAGGGAGAGACCATTTCAAGGGGTCCCAAGGACCACCCGAAGAGGACATGAAGCTGCCATCAATTCAAGAACAATTAAGAGATGAGATTAGAAGATGGGGAGATTCTAAAGAGACATTAGATCATGAACAATCAAATGGAGAATGGGATGATGAACAGAGGAGAAAACAT

Coding sequence (CDS)

ATGATTTCTCTAGCTTATGCTTCTCTATCATCCTCCCCTTCCAATTTGTCTTCTCTGAAGCTTCGTCTCCCCAGACCGCCTTCCACCTTCTCAACATCCCTCTCCAATCTCAAATCCTTCAATCCTTGCGACAAAGCAGCTTCCGACCAGAAGAGGATTGGGAATGGGGTTTGTAGGGCGGACTTGGGGAACGACGGGCCTTTTGCCGTTGCGATCGGGGCCTGCATTCTCAGTTCGTTTGTTTTTCCGGTAGCTGGCGGTGGTTCCGATGATGAGAGCGATGCCGTCATTGATTCCACCGATACCAGGTTCGCTGTCATGGGTATCATTAGCTTTATCCCCTACTTCAACTGGCTGAGTTGGGTTTTTGCGTGGCTTGATTCTGGGAGAAGGCTTTATGCTGTGTATGCACTCGTGTATTTGGTCCCTTATCTAAGGTCAAATTTATCTCTATCCCCTGAAGAGAGTTGGCTTCCTATTGCCAGTATACTTCTCTGCATTATTCACATTCAGCTTGAAGTGAGCATTAGAAATGGAGATATCCAACCCTTCCAAATATTTGGAAAAACTTCCAAGAAAATTTCTTCAACTACAAGAGGGAGAGACCATTTCAAGGGGTCCCAAGGACCACCCGAAGAGGACATGAAGCTGCCATCAATTCAAGAACAATTAAGAGATGAGATTAGAAGATGGGGAGATTCTAAAGAGACATTAGATCATGAACAATCAAATGGAGAATGGGATGATGAACAGAGGAGAAAACAT

Protein sequence

MISLAYASLSSSPSNLSSLKLRLPRPPSTFSTSLSNLKSFNPCDKAASDQKRIGNGVCRADLGNDGPFAVAIGACILSSFVFPVAGGGSDDESDAVIDSTDTRFAVMGIISFIPYFNWLSWVFAWLDSGRRLYAVYALVYLVPYLRSNLSLSPEESWLPIASILLCIIHIQLEVSIRNGDIQPFQIFGKTSKKISSTTRGRDHFKGSQGPPEEDMKLPSIQEQLRDEIRRWGDSKETLDHEQSNGEWDDEQRRKH

Homology

[Close]

BLAST of MS017660 vs. NCBI nr
Match: XP_022131237.1 (uncharacterized protein LOC111004499 [Momordica charantia])

HSP 1 Score: 494.6 bits (1272), Expect = 5.2e-136
Identity = 254/260 (97.69%), Postives = 254/260 (97.69%), Query Frame = 0


Query: 1   MISLAYASLSSSPSNLSSLKLRLPRPPSTFSTSLSNLKSFNPCDKAASDQKRIGNGVCRA 60
           MISLAYASLSSSPSNLSSLKLRLPRPPSTFSTSLSNLKS NPCDKAASDQKRIGNGVCRA
Sbjct: 1   MISLAYASLSSSPSNLSSLKLRLPRPPSTFSTSLSNLKSLNPCDKAASDQKRIGNGVCRA 60

Query: 61  DLGNDGPFAVAIGACILSSFVFPVAGGGSDDESDAVIDSTDTRFAVMGIISFIPYFNWLS 120
           DLGNDGPFAVAIGACILSSFVFPVAGGGSDDESDAVIDSTDTRFAVMGIISFIPYFNWLS
Sbjct: 61  DLGNDGPFAVAIGACILSSFVFPVAGGGSDDESDAVIDSTDTRFAVMGIISFIPYFNWLS 120

Query: 121 WVFAWLDSGRRLYAVYALVYLVPYLRSNLSLSPEESWLPIASILLCIIHIQLEVSIRNGD 180
           WVFAWLDSGRRLYAVYALVYLVPYLRSNLSLSPEESWLPIASILLCIIHIQLEVSIRNGD
Sbjct: 121 WVFAWLDSGRRLYAVYALVYLVPYLRSNLSLSPEESWLPIASILLCIIHIQLEVSIRNGD 180

Query: 181 IQPFQIFGKTSKKISSTTRGRDHFKGSQGPPE-----EDMKLPSIQEQLRDEIRRWGDSK 240
           IQPFQIFGKTSKKISSTTRGRDHFKGSQGPPE     EDMKLPSIQEQLRDEIRRWGDSK
Sbjct: 181 IQPFQIFGKTSKKISSTTRGRDHFKGSQGPPEESGEKEDMKLPSIQEQLRDEIRRWGDSK 240

Query: 241 ETLDHEQSNGEWDDEQRRKH 256
           ETLDHEQSNGEWDDEQRRKH
Sbjct: 241 ETLDHEQSNGEWDDEQRRKH 260

[Close]

BLAST of MS017660 vs. NCBI nr
Match: XP_038875289.1 (uncharacterized protein LOC120067780 [Benincasa hispida])

HSP 1 Score: 394.4 bits (1012), Expect = 7.3e-106
Identity = 208/261 (79.69%), Postives = 222/261 (85.06%), Query Frame = 0


Query: 1   MISLAYASLSSSPSNLSSLK-LRLPRPPSTFSTSLSNLKSFNPCDKAASDQKRIGNGVCR 60
           MI+LA A LSSS SNLSSLK LRL +P STFS SLSNLK  NP  K  S+Q RIGNG+CR
Sbjct: 1   MITLASAYLSSSRSNLSSLKNLRLFKPSSTFSPSLSNLKPLNPFLKPPSNQSRIGNGICR 60

Query: 61  ADLGNDGPFAVAIGACILSSFVFPVAGGGSDDESDAVIDSTDTRFAVMGIISFIPYFNWL 120
           A+LGND PFA+AIGAC LSS V PVA G SDDESDA+IDSTDTR AVM IISFIPYFNWL
Sbjct: 61  AELGNDAPFAIAIGACFLSSLVLPVADGASDDESDAIIDSTDTRLAVMSIISFIPYFNWL 120

Query: 121 SWVFAWLDSGRRLYAVYALVYLVPYLRSNLSLSPEESWLPIASILLCIIHIQLEVSIRNG 180
           SWVFAWLDSGRRLYAVYA+VYL PYLRSNLSLSPEESWLPI SILLCIIHIQLEVSI NG
Sbjct: 121 SWVFAWLDSGRRLYAVYAIVYLAPYLRSNLSLSPEESWLPIVSILLCIIHIQLEVSITNG 180

Query: 181 DIQPFQIFGKTSKKISSTTRGRDHFKGSQGP-----PEEDMKLPSIQEQLRDEIRRWGDS 240
           DIQP QIFGK SK ISST +GRDHFKGSQGP      +ED KLPS +EQ +D+IRRWGDS
Sbjct: 181 DIQPLQIFGKASKPISSTKKGRDHFKGSQGPYKESGKKEDRKLPSAEEQFQDKIRRWGDS 240

Query: 241 KETLDHEQSNGEWDDEQRRKH 256
           KE LD+EQSNGEWDDEQRRKH
Sbjct: 241 KEKLDNEQSNGEWDDEQRRKH 261

[Close]

BLAST of MS017660 vs. NCBI nr
Match: XP_023534483.1 (uncharacterized protein LOC111796027 isoform X2 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 380.9 bits (977), Expect = 8.3e-102
Identity = 197/260 (75.77%), Postives = 218/260 (83.85%), Query Frame = 0


Query: 1   MISLAYASLSSSPSNLSSLK-LRLPRPPSTFSTSLSNLKSFNPCDKAASDQKRIGNGVCR 60
           MI+LA A LSSSPSN SSL  LRL +PP TFSTSLSNLK  NP  K+AS+Q+   NG+CR
Sbjct: 1   MITLASAYLSSSPSNFSSLNLLRLTKPPFTFSTSLSNLKPLNPSHKSASNQRTTRNGICR 60

Query: 61  ADLGNDGPFAVAIGACILSSFVFPVAGGGSDDESDAVIDSTDTRFAVMGIISFIPYFNWL 120
           A+LGND PFA+AIGACIL+S V P AGGGSDD+SDAV+DSTD R AVMGIISFIPYFNWL
Sbjct: 61  AELGNDAPFAIAIGACILTSLVLPPAGGGSDDDSDAVMDSTDARLAVMGIISFIPYFNWL 120

Query: 121 SWVFAWLDSGRRLYAVYALVYLVPYLRSNLSLSPEESWLPIASILLCIIHIQLEVSIRNG 180
           SWVFAWLDSG+R YAVYA+VYL PYLRSNLSLSP+ESWLPI SIL+CI HIQ+E SI+NG
Sbjct: 121 SWVFAWLDSGKRRYAVYAIVYLAPYLRSNLSLSPDESWLPIVSILICIAHIQVEASIKNG 180

Query: 181 DIQPFQIFGKTSKKISSTTRGRDHFKGSQGPPEE-----DMKLPSIQEQLRDEIRRWGDS 240
           DIQPFQIFGK S +IS T  GR H KGSQGP ++     DMKLPS +EQLRDEIR WGD 
Sbjct: 181 DIQPFQIFGKASNQISRTKIGRGHLKGSQGPTKKSGKKRDMKLPSAEEQLRDEIRGWGDY 240

Query: 241 KETLDHEQSNGEWDDEQRRK 255
           KETLDHEQSN EWDDEQRRK
Sbjct: 241 KETLDHEQSNEEWDDEQRRK 260

[Close]

BLAST of MS017660 vs. NCBI nr
Match: XP_022958725.1 (uncharacterized protein LOC111459865 isoform X2 [Cucurbita moschata])

HSP 1 Score: 380.6 bits (976), Expect = 1.1e-101
Identity = 197/260 (75.77%), Postives = 218/260 (83.85%), Query Frame = 0


Query: 1   MISLAYASLSSSPSNLSSLK-LRLPRPPSTFSTSLSNLKSFNPCDKAASDQKRIGNGVCR 60
           MI+LA A LSSSPSN SSL  LRL +PP TFSTSLSNLK  NP  K+AS+Q+   NG+CR
Sbjct: 1   MITLASAYLSSSPSNFSSLNLLRLTKPPFTFSTSLSNLKPLNPSHKSASNQRTTRNGICR 60

Query: 61  ADLGNDGPFAVAIGACILSSFVFPVAGGGSDDESDAVIDSTDTRFAVMGIISFIPYFNWL 120
           A+LGND PFA+AIGACILSS V P AGGGSDD+SDAV+DSTD R AVMGIISFIPYFNWL
Sbjct: 61  AELGNDAPFAIAIGACILSSLVLPPAGGGSDDDSDAVMDSTDARLAVMGIISFIPYFNWL 120

Query: 121 SWVFAWLDSGRRLYAVYALVYLVPYLRSNLSLSPEESWLPIASILLCIIHIQLEVSIRNG 180
           SWVFAWLDSG+R YAVYA+VYL PYLRSNLSLSP+ESWLPI SIL+CI HIQ+E SI+NG
Sbjct: 121 SWVFAWLDSGKRRYAVYAIVYLAPYLRSNLSLSPDESWLPIVSILICIAHIQVEASIKNG 180

Query: 181 DIQPFQIFGKTSKKISSTTRGRDHFKGSQGPPEE-----DMKLPSIQEQLRDEIRRWGDS 240
           DIQPFQIFGKTS +IS T   R H KGSQGP ++     DMKLPS +EQLRDEI+ WGD 
Sbjct: 181 DIQPFQIFGKTSNQISRTKIARGHLKGSQGPTKKSGKKRDMKLPSAEEQLRDEIKGWGDY 240

Query: 241 KETLDHEQSNGEWDDEQRRK 255
           KETLDHEQSN EWDDEQRRK
Sbjct: 241 KETLDHEQSNEEWDDEQRRK 260

[Close]

BLAST of MS017660 vs. NCBI nr
Match: XP_023534481.1 (uncharacterized protein LOC111796027 isoform X1 [Cucurbita pepo subsp. pepo] >XP_023534482.1 uncharacterized protein LOC111796027 isoform X1 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 379.8 bits (974), Expect = 1.9e-101
Identity = 199/261 (76.25%), Postives = 219/261 (83.91%), Query Frame = 0


Query: 1   MISLAYASLSSSPSNLSSLK-LRLPRPPSTFSTSLSNLKSFNPCDKAASDQKR-IGNGVC 60
           MI+LA A LSSSPSN SSL  LRL +PP TFSTSLSNLK  NP  K+AS+QKR   NG+C
Sbjct: 1   MITLASAYLSSSPSNFSSLNLLRLTKPPFTFSTSLSNLKPLNPSHKSASNQKRTTRNGIC 60

Query: 61  RADLGNDGPFAVAIGACILSSFVFPVAGGGSDDESDAVIDSTDTRFAVMGIISFIPYFNW 120
           RA+LGND PFA+AIGACIL+S V P AGGGSDD+SDAV+DSTD R AVMGIISFIPYFNW
Sbjct: 61  RAELGNDAPFAIAIGACILTSLVLPPAGGGSDDDSDAVMDSTDARLAVMGIISFIPYFNW 120

Query: 121 LSWVFAWLDSGRRLYAVYALVYLVPYLRSNLSLSPEESWLPIASILLCIIHIQLEVSIRN 180
           LSWVFAWLDSG+R YAVYA+VYL PYLRSNLSLSP+ESWLPI SIL+CI HIQ+E SI+N
Sbjct: 121 LSWVFAWLDSGKRRYAVYAIVYLAPYLRSNLSLSPDESWLPIVSILICIAHIQVEASIKN 180

Query: 181 GDIQPFQIFGKTSKKISSTTRGRDHFKGSQGPPEE-----DMKLPSIQEQLRDEIRRWGD 240
           GDIQPFQIFGK S +IS T  GR H KGSQGP ++     DMKLPS +EQLRDEIR WGD
Sbjct: 181 GDIQPFQIFGKASNQISRTKIGRGHLKGSQGPTKKSGKKRDMKLPSAEEQLRDEIRGWGD 240

Query: 241 SKETLDHEQSNGEWDDEQRRK 255
            KETLDHEQSN EWDDEQRRK
Sbjct: 241 YKETLDHEQSNEEWDDEQRRK 261

[Close]

BLAST of MS017660 vs. ExPASy TrEMBL
Match: A0A6J1BQE6 (uncharacterized protein LOC111004499 OS=Momordica charantia OX=3673 GN=LOC111004499 PE=4 SV=1)

HSP 1 Score: 494.6 bits (1272), Expect = 2.5e-136
Identity = 254/260 (97.69%), Postives = 254/260 (97.69%), Query Frame = 0


Query: 1   MISLAYASLSSSPSNLSSLKLRLPRPPSTFSTSLSNLKSFNPCDKAASDQKRIGNGVCRA 60
           MISLAYASLSSSPSNLSSLKLRLPRPPSTFSTSLSNLKS NPCDKAASDQKRIGNGVCRA
Sbjct: 1   MISLAYASLSSSPSNLSSLKLRLPRPPSTFSTSLSNLKSLNPCDKAASDQKRIGNGVCRA 60

Query: 61  DLGNDGPFAVAIGACILSSFVFPVAGGGSDDESDAVIDSTDTRFAVMGIISFIPYFNWLS 120
           DLGNDGPFAVAIGACILSSFVFPVAGGGSDDESDAVIDSTDTRFAVMGIISFIPYFNWLS
Sbjct: 61  DLGNDGPFAVAIGACILSSFVFPVAGGGSDDESDAVIDSTDTRFAVMGIISFIPYFNWLS 120

Query: 121 WVFAWLDSGRRLYAVYALVYLVPYLRSNLSLSPEESWLPIASILLCIIHIQLEVSIRNGD 180
           WVFAWLDSGRRLYAVYALVYLVPYLRSNLSLSPEESWLPIASILLCIIHIQLEVSIRNGD
Sbjct: 121 WVFAWLDSGRRLYAVYALVYLVPYLRSNLSLSPEESWLPIASILLCIIHIQLEVSIRNGD 180

Query: 181 IQPFQIFGKTSKKISSTTRGRDHFKGSQGPPE-----EDMKLPSIQEQLRDEIRRWGDSK 240
           IQPFQIFGKTSKKISSTTRGRDHFKGSQGPPE     EDMKLPSIQEQLRDEIRRWGDSK
Sbjct: 181 IQPFQIFGKTSKKISSTTRGRDHFKGSQGPPEESGEKEDMKLPSIQEQLRDEIRRWGDSK 240

Query: 241 ETLDHEQSNGEWDDEQRRKH 256
           ETLDHEQSNGEWDDEQRRKH
Sbjct: 241 ETLDHEQSNGEWDDEQRRKH 260

[Close]

BLAST of MS017660 vs. ExPASy TrEMBL
Match: A0A6J1H4A9 (uncharacterized protein LOC111459865 isoform X2 OS=Cucurbita moschata OX=3662 GN=LOC111459865 PE=4 SV=1)

HSP 1 Score: 380.6 bits (976), Expect = 5.3e-102
Identity = 197/260 (75.77%), Postives = 218/260 (83.85%), Query Frame = 0


Query: 1   MISLAYASLSSSPSNLSSLK-LRLPRPPSTFSTSLSNLKSFNPCDKAASDQKRIGNGVCR 60
           MI+LA A LSSSPSN SSL  LRL +PP TFSTSLSNLK  NP  K+AS+Q+   NG+CR
Sbjct: 1   MITLASAYLSSSPSNFSSLNLLRLTKPPFTFSTSLSNLKPLNPSHKSASNQRTTRNGICR 60

Query: 61  ADLGNDGPFAVAIGACILSSFVFPVAGGGSDDESDAVIDSTDTRFAVMGIISFIPYFNWL 120
           A+LGND PFA+AIGACILSS V P AGGGSDD+SDAV+DSTD R AVMGIISFIPYFNWL
Sbjct: 61  AELGNDAPFAIAIGACILSSLVLPPAGGGSDDDSDAVMDSTDARLAVMGIISFIPYFNWL 120

Query: 121 SWVFAWLDSGRRLYAVYALVYLVPYLRSNLSLSPEESWLPIASILLCIIHIQLEVSIRNG 180
           SWVFAWLDSG+R YAVYA+VYL PYLRSNLSLSP+ESWLPI SIL+CI HIQ+E SI+NG
Sbjct: 121 SWVFAWLDSGKRRYAVYAIVYLAPYLRSNLSLSPDESWLPIVSILICIAHIQVEASIKNG 180

Query: 181 DIQPFQIFGKTSKKISSTTRGRDHFKGSQGPPEE-----DMKLPSIQEQLRDEIRRWGDS 240
           DIQPFQIFGKTS +IS T   R H KGSQGP ++     DMKLPS +EQLRDEI+ WGD 
Sbjct: 181 DIQPFQIFGKTSNQISRTKIARGHLKGSQGPTKKSGKKRDMKLPSAEEQLRDEIKGWGDY 240

Query: 241 KETLDHEQSNGEWDDEQRRK 255
           KETLDHEQSN EWDDEQRRK
Sbjct: 241 KETLDHEQSNEEWDDEQRRK 260

[Close]

BLAST of MS017660 vs. ExPASy TrEMBL
Match: A0A6J1H5Y1 (uncharacterized protein LOC111459865 isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111459865 PE=4 SV=1)

HSP 1 Score: 378.3 bits (970), Expect = 2.6e-101
Identity = 198/261 (75.86%), Postives = 219/261 (83.91%), Query Frame = 0


Query: 1   MISLAYASLSSSPSNLSSLK-LRLPRPPSTFSTSLSNLKSFNPCDKAASDQKR-IGNGVC 60
           MI+LA A LSSSPSN SSL  LRL +PP TFSTSLSNLK  NP  K+AS+Q+R   NG+C
Sbjct: 1   MITLASAYLSSSPSNFSSLNLLRLTKPPFTFSTSLSNLKPLNPSHKSASNQRRTTRNGIC 60

Query: 61  RADLGNDGPFAVAIGACILSSFVFPVAGGGSDDESDAVIDSTDTRFAVMGIISFIPYFNW 120
           RA+LGND PFA+AIGACILSS V P AGGGSDD+SDAV+DSTD R AVMGIISFIPYFNW
Sbjct: 61  RAELGNDAPFAIAIGACILSSLVLPPAGGGSDDDSDAVMDSTDARLAVMGIISFIPYFNW 120

Query: 121 LSWVFAWLDSGRRLYAVYALVYLVPYLRSNLSLSPEESWLPIASILLCIIHIQLEVSIRN 180
           LSWVFAWLDSG+R YAVYA+VYL PYLRSNLSLSP+ESWLPI SIL+CI HIQ+E SI+N
Sbjct: 121 LSWVFAWLDSGKRRYAVYAIVYLAPYLRSNLSLSPDESWLPIVSILICIAHIQVEASIKN 180

Query: 181 GDIQPFQIFGKTSKKISSTTRGRDHFKGSQGPPEE-----DMKLPSIQEQLRDEIRRWGD 240
           GDIQPFQIFGKTS +IS T   R H KGSQGP ++     DMKLPS +EQLRDEI+ WGD
Sbjct: 181 GDIQPFQIFGKTSNQISRTKIARGHLKGSQGPTKKSGKKRDMKLPSAEEQLRDEIKGWGD 240

Query: 241 SKETLDHEQSNGEWDDEQRRK 255
            KETLDHEQSN EWDDEQRRK
Sbjct: 241 YKETLDHEQSNEEWDDEQRRK 261

[Close]

BLAST of MS017660 vs. ExPASy TrEMBL
Match: A0A6J1K887 (uncharacterized protein LOC111491538 isoform X2 OS=Cucurbita maxima OX=3661 GN=LOC111491538 PE=4 SV=1)

HSP 1 Score: 377.9 bits (969), Expect = 3.4e-101
Identity = 195/260 (75.00%), Postives = 217/260 (83.46%), Query Frame = 0


Query: 1   MISLAYASLSSSPSNLSSLK-LRLPRPPSTFSTSLSNLKSFNPCDKAASDQKRIGNGVCR 60
           M++LA A LSSSPSN SSL  LRL +PP TFSTSLSNLK  NP  K+AS+Q+   NG+CR
Sbjct: 1   MVTLASAYLSSSPSNFSSLNLLRLSKPPFTFSTSLSNLKPLNPSHKSASNQRTTRNGICR 60

Query: 61  ADLGNDGPFAVAIGACILSSFVFPVAGGGSDDESDAVIDSTDTRFAVMGIISFIPYFNWL 120
           A+LGND PFA+AIGACILSS V P AGGGSDD+SDAV+DSTD R AVMGIISFIPYFNWL
Sbjct: 61  AELGNDAPFAIAIGACILSSLVLPPAGGGSDDDSDAVMDSTDARLAVMGIISFIPYFNWL 120

Query: 121 SWVFAWLDSGRRLYAVYALVYLVPYLRSNLSLSPEESWLPIASILLCIIHIQLEVSIRNG 180
           SWVFAWLDSG+R YAVYA+VYL PYLRSNLSLSP+ESWLPI SIL+CI HIQ+E SI+NG
Sbjct: 121 SWVFAWLDSGKRRYAVYAIVYLAPYLRSNLSLSPDESWLPIVSILICIAHIQVEASIKNG 180

Query: 181 DIQPFQIFGKTSKKISSTTRGRDHFKGSQGPPEE-----DMKLPSIQEQLRDEIRRWGDS 240
           DIQPFQIFGK S +IS T  GR H KG +GP ++     DMKLPS +EQLRDEIR WGD 
Sbjct: 181 DIQPFQIFGKASNQISPTEIGRGHLKGFKGPTKKSGKKRDMKLPSAEEQLRDEIRGWGDY 240

Query: 241 KETLDHEQSNGEWDDEQRRK 255
           KETLDHEQSN EWDDEQRRK
Sbjct: 241 KETLDHEQSNEEWDDEQRRK 260

[Close]

BLAST of MS017660 vs. ExPASy TrEMBL
Match: A0A6J1KAA9 (uncharacterized protein LOC111491538 isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC111491538 PE=4 SV=1)

HSP 1 Score: 375.6 bits (963), Expect = 1.7e-100
Identity = 196/261 (75.10%), Postives = 218/261 (83.52%), Query Frame = 0


Query: 1   MISLAYASLSSSPSNLSSLK-LRLPRPPSTFSTSLSNLKSFNPCDKAASDQKR-IGNGVC 60
           M++LA A LSSSPSN SSL  LRL +PP TFSTSLSNLK  NP  K+AS+Q+R   NG+C
Sbjct: 1   MVTLASAYLSSSPSNFSSLNLLRLSKPPFTFSTSLSNLKPLNPSHKSASNQRRTTRNGIC 60

Query: 61  RADLGNDGPFAVAIGACILSSFVFPVAGGGSDDESDAVIDSTDTRFAVMGIISFIPYFNW 120
           RA+LGND PFA+AIGACILSS V P AGGGSDD+SDAV+DSTD R AVMGIISFIPYFNW
Sbjct: 61  RAELGNDAPFAIAIGACILSSLVLPPAGGGSDDDSDAVMDSTDARLAVMGIISFIPYFNW 120

Query: 121 LSWVFAWLDSGRRLYAVYALVYLVPYLRSNLSLSPEESWLPIASILLCIIHIQLEVSIRN 180
           LSWVFAWLDSG+R YAVYA+VYL PYLRSNLSLSP+ESWLPI SIL+CI HIQ+E SI+N
Sbjct: 121 LSWVFAWLDSGKRRYAVYAIVYLAPYLRSNLSLSPDESWLPIVSILICIAHIQVEASIKN 180

Query: 181 GDIQPFQIFGKTSKKISSTTRGRDHFKGSQGPPEE-----DMKLPSIQEQLRDEIRRWGD 240
           GDIQPFQIFGK S +IS T  GR H KG +GP ++     DMKLPS +EQLRDEIR WGD
Sbjct: 181 GDIQPFQIFGKASNQISPTEIGRGHLKGFKGPTKKSGKKRDMKLPSAEEQLRDEIRGWGD 240

Query: 241 SKETLDHEQSNGEWDDEQRRK 255
            KETLDHEQSN EWDDEQRRK
Sbjct: 241 YKETLDHEQSNEEWDDEQRRK 261

[Close]

BLAST of MS017660 vs. TAIR 10
Match: AT5G41960.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). )

HSP 1 Score: 192.2 bits (487), Expect = 5.1e-49
Identity = 113/215 (52.56%), Postives = 135/215 (62.79%), Query Frame = 0


Query: 4   LAYASLSSSPSNLSSLKLRLPRPPSTFSTSLSNLKSFNPCDKAASDQKRIGNGVCRADLG 63
           L    LSSS S  +  +L      S+ S+S S L    P        ++I   +CRA+  
Sbjct: 7   LPICGLSSSASLYTKARLL-----SSSSSSPSPLPLAYPLQNPKKLCRKIERVICRAEFS 66

Query: 64  NDGPFAVAIGACILSSFVFPVAGGGSDDESD---AVIDSTDTRFAVMGIISFIPYFNWLS 123
            D P   AIGACILSSFVFPVA   +D+E +   + I STD R A MGIISFIPYFNWLS
Sbjct: 67  QDAPLVTAIGACILSSFVFPVAKRVNDEEEEEENSAIVSTDMRLAAMGIISFIPYFNWLS 126

Query: 124 WVFAWLDSGRRLYAVYALVYLVPYLRSNLSLSPEESWLPIASILLCIIHIQLEVSIRNGD 183
           WVFAWLD+G+  YAVYALVYLVPYL SNLS+SPEESWLPI SI+L IIH+QLE SI NGD
Sbjct: 127 WVFAWLDTGKSRYAVYALVYLVPYLSSNLSISPEESWLPITSIVLGIIHVQLEASIANGD 186

Query: 184 IQPFQIFGKTSKKISSTTRG---RDHFKGSQGPPE 213
           ++    F  TS    S+ +    + HFKG     E
Sbjct: 187 VETLAFFRNTSDDDFSSKKRIHFKKHFKGKNSDDE 216

The following BLAST results are available for this feature:

BLAST of MS017660 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022131237.1	5.2e-136	97.69	uncharacterized protein LOC111004499 [Momordica charantia]	[more]
XP_038875289.1	7.3e-106	79.69	uncharacterized protein LOC120067780 [Benincasa hispida]	[more]
XP_023534483.1	8.3e-102	75.77	uncharacterized protein LOC111796027 isoform X2 [Cucurbita pepo subsp. pepo]	[more]
XP_022958725.1	1.1e-101	75.77	uncharacterized protein LOC111459865 isoform X2 [Cucurbita moschata]	[more]
XP_023534481.1	1.9e-101	76.25	uncharacterized protein LOC111796027 isoform X1 [Cucurbita pepo subsp. pepo] >XP...	[more]

BLAST of MS017660 vs. NCBI nr


Match Name	E-value	Identity	Description

BLAST of MS017660 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1BQE6	2.5e-136	97.69	uncharacterized protein LOC111004499 OS=Momordica charantia OX=3673 GN=LOC111004...	[more]
A0A6J1H4A9	5.3e-102	75.77	uncharacterized protein LOC111459865 isoform X2 OS=Cucurbita moschata OX=3662 GN...	[more]
A0A6J1H5Y1	2.6e-101	75.86	uncharacterized protein LOC111459865 isoform X1 OS=Cucurbita moschata OX=3662 GN...	[more]
A0A6J1K887	3.4e-101	75.00	uncharacterized protein LOC111491538 isoform X2 OS=Cucurbita maxima OX=3661 GN=L...	[more]
A0A6J1KAA9	1.7e-100	75.10	uncharacterized protein LOC111491538 isoform X1 OS=Cucurbita maxima OX=3661 GN=L...	[more]

BLAST of MS017660 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G41960.1	5.1e-49	52.56	unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic...	[more]

InterPro

Analysis Name: InterPro Annotations of Bitter gourd (TR) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 195..210
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 193..219
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 231..255
None	No IPR available	PANTHER	PTHR36804	OSJNBA0013K16.11 PROTEIN	coord: 13..255

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
MS017660.1	MS017660.1	mRNA