MS017575 (gene) Bitter gourd (TR) v1

Overview


Name	MS017575
Type	gene
Organism	Momordica charantia cv. TR (Bitter gourd (TR) v1)
Description	ER lumen protein-retaining receptor
Location	scaffold373: 700114 .. 702009 (-)
RNA-Seq Expression	MS017575
Synteny	MS017575

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

GCAGGTGTTTCTTTGAAGACTCAAGAGCTATATGCAATTGTTTTTACCACCCGCTATTTGGATATCTTTACCGACTTCATATCTCTATATAATACGGTCATGAAGTTGATATTCTTGGGGAGTTCATATTCAATTATTTGGTACATTAGACGCCACAAGATTGTCCGTCGGTCATATGACAAGAACCAAGATACTTTCCGCCATCTTTTCCTCATCATACCTTGTTTTGTCTTGGCCCTACTTATCAATGAAAAATTTACTTTCAAGGAGGTTAGCTATTCTTGTGAATTTTCCTTAGTTATAAGAATTTACATTGAAACTATCCAAAGAAAAGAAAAAAAAGGCAAGTCGTAGTCAACATGTGCATCTCTATTTTTAAGCTTTTGATTACAGAATCGTTGCACACATATTTCCTATATTGACTCAATAACTGGAACAGGTCATGTGGACATTTTCTTTGTACTTGGAAGCTGTTGCTATCCTCCCTCAGCTTGTACTTCTACAACGAACAAAGAATATTGACAATTTGACTGGGCAATACGTATTTCTTCTTGGGTATGATTCGGTTACCAATATAGCATTTAACCAGTTCTGTTGACGTGATAATACTCAAATCTACTGCTAGGTCTCCATCTTTTCATATATTGCTATCTTCCTCTTTTCTTATGTACGTACTTTTTGTTTAGAATCATACCAACCGTAAATATTAGATAATTGAGAATTTGTTTGCTTCATTTTTATGTGTAATTACATTGTGTCTAAATGTAGGCATCTCATATAAGTCTAACAGGGATATTATGAATTCAAGCCCATAAAGTTGGAGGAAATCTAGAAGAAGTTTTAACAGACTTTTTTTTCTTCTGTTGGGGGGTGGTGTTGAATAGATAGTGCGCCCGATGAAGTTATAGCATTTGGAAGATAGAAAGTTATTAGATATTTCTGTCTTTTGTTCTTACAGAATGCTTTGTACTTTTAGAGGCCACAACTCAAATACATCGTGATGCACTTTTGGATAATGACCATAGGGCTAAATAAGAATCTCACTTACTGTATTACTTTCAAATATATTGGGATCCTAAATCTAATTGTTCATTATATGTGGTTTCCACATTAGTGTAAAACTCTTTTCTCTAAAGATTTCCCCTTGGTAGTTAGTGACTTCCCTGGCATTCCTATTCATGCTAAAATAGTAGTGAAAGGTGCCAGAGCATGTCTAAAGAAGCTGCAATTTCATGTGAGCCTGGAACATTTTAGGGGGAAGAGTCTAACCAACTATGTTTCTTATTTATGTACTTGTAATTAGATTTATACCAATGAAATGTGATTCACAAATAAAGTAGAAGCAGCGCCTAGATGGATCTAATTTTCTCATAAAATGTATTAGATTGGCCCTGCCAAGAATAGTGTTAGGACAAGACATTTCTTTTATGAAGGGTGCTACAATCCTGTTTCTTTACTACATAACTAAAATTTGCTTAAAATTAAGTTGATTGTCTAGCCAATCCAAGTATAGTTCAATGGATGAGATACTTATTACCATCTCAAGGGTTCGACTCTCCACTCTGCAATTGTTGAACTTAAAATTAAGTTGTATACTGTCTAAGTTGGTAGTTTATAAAGGTGTTGATTGAATTCTGATTTGAACAAGAACCCAGATTTCATTACATGTGTGATAGGTATGTTCAATTTGAGTTATATTGTAGCCAAACAGATAAGTACCTATTAGGTCATTTAATATCCACTTGTTTGACTGAGTTATTTCAAACTCGGAACCTTATTGAACAAAAATATGTACTGAATCGTAACTTTTCTCGATGCAGTGCGTACCGAGCTTTGTACATTGTCAACTGGGTCTATCGATACTTCACAGAGCCTCACTTTGTCCACTGGATAAGT

mRNA sequence

GCAGGTGTTTCTTTGAAGACTCAAGAGCTATATGCAATTGTTTTTACCACCCGCTATTTGGATATCTTTACCGACTTCATATCTCTATATAATACGGTCATGAAGTTGATATTCTTGGGGAGTTCATATTCAATTATTTGGTACATTAGACGCCACAAGATTGTCCGTCGGTCATATGACAAGAACCAAGATACTTTCCGCCATCTTTTCCTCATCATACCTTGTTTTGTCTTGGCCCTACTTATCAATGAAAAATTTACTTTCAAGGAGGTCATGTGGACATTTTCTTTGTACTTGGAAGCTGTTGCTATCCTCCCTCAGCTTGTACTTCTACAACGAACAAAGAATATTGACAATTTGACTGGGCAATACGTATTTCTTCTTGGTGCGTACCGAGCTTTGTACATTGTCAACTGGGTCTATCGATACTTCACAGAGCCTCACTTTGTCCACTGGATAAGT

Coding sequence (CDS)

GCAGGTGTTTCTTTGAAGACTCAAGAGCTATATGCAATTGTTTTTACCACCCGCTATTTGGATATCTTTACCGACTTCATATCTCTATATAATACGGTCATGAAGTTGATATTCTTGGGGAGTTCATATTCAATTATTTGGTACATTAGACGCCACAAGATTGTCCGTCGGTCATATGACAAGAACCAAGATACTTTCCGCCATCTTTTCCTCATCATACCTTGTTTTGTCTTGGCCCTACTTATCAATGAAAAATTTACTTTCAAGGAGGTCATGTGGACATTTTCTTTGTACTTGGAAGCTGTTGCTATCCTCCCTCAGCTTGTACTTCTACAACGAACAAAGAATATTGACAATTTGACTGGGCAATACGTATTTCTTCTTGGTGCGTACCGAGCTTTGTACATTGTCAACTGGGTCTATCGATACTTCACAGAGCCTCACTTTGTCCACTGGATAAGT

Protein sequence

AGVSLKTQELYAIVFTTRYLDIFTDFISLYNTVMKLIFLGSSYSIIWYIRRHKIVRRSYDKNQDTFRHLFLIIPCFVLALLINEKFTFKEVMWTFSLYLEAVAILPQLVLLQRTKNIDNLTGQYVFLLGAYRALYIVNWVYRYFTEPHFVHWIS

Homology

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BLAST of MS017575 vs. NCBI nr
Match: XP_022159725.1 (ER lumen protein-retaining receptor [Momordica charantia])

HSP 1 Score: 306.2 bits (783), Expect = 1.6e-79
Identity = 153/154 (99.35%), Postives = 154/154 (100.00%), Query Frame = 0


Query: 1   AGVSLKTQELYAIVFTTRYLDIFTDFISLYNTVMKLIFLGSSYSIIWYIRRHKIVRRSYD 60
           AGVSLKTQELYAIVFTTRYLDIFTDFISLYNTVMKLIFLGSSYSIIWYIRRHKIVRRSYD
Sbjct: 30  AGVSLKTQELYAIVFTTRYLDIFTDFISLYNTVMKLIFLGSSYSIIWYIRRHKIVRRSYD 89

Query: 61  KNQDTFRHLFLIIPCFVLALLINEKFTFKEVMWTFSLYLEAVAILPQLVLLQRTKNIDNL 120
           KNQDTFRHLFLIIPCFVLALLINEKFTFKEVMWTFSLYLEAVAILPQLVLLQRTKNIDNL
Sbjct: 90  KNQDTFRHLFLIIPCFVLALLINEKFTFKEVMWTFSLYLEAVAILPQLVLLQRTKNIDNL 149

Query: 121 TGQYVFLLGAYRALYIVNWVYRYFTEPHFVHWIS 155
           TGQYVFLLGAYRALYIVNWVYRYFTEPHFVHWI+
Sbjct: 150 TGQYVFLLGAYRALYIVNWVYRYFTEPHFVHWIT 183

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BLAST of MS017575 vs. NCBI nr
Match: XP_004144385.1 (ER lumen protein-retaining receptor [Cucumis sativus] >KGN58365.1 hypothetical protein Csa_002130 [Cucumis sativus])

HSP 1 Score: 302.4 bits (773), Expect = 2.3e-78
Identity = 149/154 (96.75%), Postives = 153/154 (99.35%), Query Frame = 0


Query: 1   AGVSLKTQELYAIVFTTRYLDIFTDFISLYNTVMKLIFLGSSYSIIWYIRRHKIVRRSYD 60
           AGVSLKTQELYAIVFTTRYLDIFTDFISLYNTVMKLIFLGSSYSI+WYIRRHKIVRRSYD
Sbjct: 30  AGVSLKTQELYAIVFTTRYLDIFTDFISLYNTVMKLIFLGSSYSIVWYIRRHKIVRRSYD 89

Query: 61  KNQDTFRHLFLIIPCFVLALLINEKFTFKEVMWTFSLYLEAVAILPQLVLLQRTKNIDNL 120
           KNQDTFRHLFLI+PCFVLALLINEK TFKEVMWTFSLYLEAVAILPQLVLLQRTKNIDNL
Sbjct: 90  KNQDTFRHLFLILPCFVLALLINEKLTFKEVMWTFSLYLEAVAILPQLVLLQRTKNIDNL 149

Query: 121 TGQYVFLLGAYRALYIVNWVYRYFTEPHFVHWIS 155
           TGQYVFLLGAYRALYIVNW+YRYFTEPHFVHWI+
Sbjct: 150 TGQYVFLLGAYRALYIVNWIYRYFTEPHFVHWIT 183

[Close]

BLAST of MS017575 vs. NCBI nr
Match: XP_008465077.1 (PREDICTED: ER lumen protein-retaining receptor [Cucumis melo])

HSP 1 Score: 302.0 bits (772), Expect = 3.0e-78
Identity = 148/154 (96.10%), Postives = 153/154 (99.35%), Query Frame = 0


Query: 1   AGVSLKTQELYAIVFTTRYLDIFTDFISLYNTVMKLIFLGSSYSIIWYIRRHKIVRRSYD 60
           AG+SLKTQELYAIVFTTRYLDIFTDFISLYNTVMKLIFLGSSYSI+WYIRRHKIVRRSYD
Sbjct: 30  AGISLKTQELYAIVFTTRYLDIFTDFISLYNTVMKLIFLGSSYSIVWYIRRHKIVRRSYD 89

Query: 61  KNQDTFRHLFLIIPCFVLALLINEKFTFKEVMWTFSLYLEAVAILPQLVLLQRTKNIDNL 120
           KNQDTFRHLFLI+PCFVLALLINEK TFKEVMWTFSLYLEAVAILPQLVLLQRTKNIDNL
Sbjct: 90  KNQDTFRHLFLILPCFVLALLINEKLTFKEVMWTFSLYLEAVAILPQLVLLQRTKNIDNL 149

Query: 121 TGQYVFLLGAYRALYIVNWVYRYFTEPHFVHWIS 155
           TGQYVFLLGAYRALYIVNW+YRYFTEPHFVHWI+
Sbjct: 150 TGQYVFLLGAYRALYIVNWIYRYFTEPHFVHWIT 183

[Close]

BLAST of MS017575 vs. NCBI nr
Match: XP_038886982.1 (ER lumen protein-retaining receptor [Benincasa hispida])

HSP 1 Score: 300.4 bits (768), Expect = 8.7e-78
Identity = 147/154 (95.45%), Postives = 153/154 (99.35%), Query Frame = 0


Query: 1   AGVSLKTQELYAIVFTTRYLDIFTDFISLYNTVMKLIFLGSSYSIIWYIRRHKIVRRSYD 60
           AGVSLKTQELYAIVFTTRYLDIFTDFISLYN++MKLIFLGSSYSI+WYIRRHKIVRRSYD
Sbjct: 30  AGVSLKTQELYAIVFTTRYLDIFTDFISLYNSIMKLIFLGSSYSIVWYIRRHKIVRRSYD 89

Query: 61  KNQDTFRHLFLIIPCFVLALLINEKFTFKEVMWTFSLYLEAVAILPQLVLLQRTKNIDNL 120
           KNQDTFRHLFLI+PCFVLALLINEK TFKEVMWTFSLYLEAVAILPQLVLLQRTKNIDNL
Sbjct: 90  KNQDTFRHLFLILPCFVLALLINEKLTFKEVMWTFSLYLEAVAILPQLVLLQRTKNIDNL 149

Query: 121 TGQYVFLLGAYRALYIVNWVYRYFTEPHFVHWIS 155
           TGQYVFLLGAYRALYIVNW+YRYFTEPHFVHWI+
Sbjct: 150 TGQYVFLLGAYRALYIVNWIYRYFTEPHFVHWIT 183

[Close]

BLAST of MS017575 vs. NCBI nr
Match: XP_022931239.1 (ER lumen protein-retaining receptor [Cucurbita moschata])

HSP 1 Score: 298.9 bits (764), Expect = 2.5e-77
Identity = 147/154 (95.45%), Postives = 152/154 (98.70%), Query Frame = 0


Query: 1   AGVSLKTQELYAIVFTTRYLDIFTDFISLYNTVMKLIFLGSSYSIIWYIRRHKIVRRSYD 60
           AGVSLKTQELYAIVFTTRYLDIFTDFISLYNTVMKLIFLGSSYSI+WYIRRHKIVRRSYD
Sbjct: 30  AGVSLKTQELYAIVFTTRYLDIFTDFISLYNTVMKLIFLGSSYSIVWYIRRHKIVRRSYD 89

Query: 61  KNQDTFRHLFLIIPCFVLALLINEKFTFKEVMWTFSLYLEAVAILPQLVLLQRTKNIDNL 120
           KNQDTFRH+FLI+PC VLALLINEK TFKEVMWTFSLYLEAVAILPQLVLLQRTKNIDNL
Sbjct: 90  KNQDTFRHIFLILPCVVLALLINEKLTFKEVMWTFSLYLEAVAILPQLVLLQRTKNIDNL 149

Query: 121 TGQYVFLLGAYRALYIVNWVYRYFTEPHFVHWIS 155
           TGQYVFLLGAYRALYI+NWVYRYFTEPHFVHWI+
Sbjct: 150 TGQYVFLLGAYRALYIINWVYRYFTEPHFVHWIT 183

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BLAST of MS017575 vs. ExPASy Swiss-Prot
Match: Q9ZTN2 (ER lumen protein-retaining receptor OS=Petunia hybrida OX=4102 GN=ERD2 PE=2 SV=1)

HSP 1 Score: 281.2 bits (718), Expect = 7.1e-75
Identity = 133/154 (86.36%), Postives = 148/154 (96.10%), Query Frame = 0


Query: 1   AGVSLKTQELYAIVFTTRYLDIFTDFISLYNTVMKLIFLGSSYSIIWYIRRHKIVRRSYD 60
           AGVSLKTQELYA+VF TRYLDIFTDFISLYNT MKL+FLGSS SI+WY+R HKIVRRSYD
Sbjct: 30  AGVSLKTQELYALVFVTRYLDIFTDFISLYNTTMKLVFLGSSLSIVWYMRHHKIVRRSYD 89

Query: 61  KNQDTFRHLFLIIPCFVLALLINEKFTFKEVMWTFSLYLEAVAILPQLVLLQRTKNIDNL 120
           K+QDTFRHLFL++PC +LAL+INEKFTFKEVMWTFS+YLEAVAILPQLVLLQRT+NIDNL
Sbjct: 90  KDQDTFRHLFLVLPCLLLALVINEKFTFKEVMWTFSIYLEAVAILPQLVLLQRTRNIDNL 149

Query: 121 TGQYVFLLGAYRALYIVNWVYRYFTEPHFVHWIS 155
           TGQY+FLLGAYR+ YI+NWVYRYFTEPHFVHWI+
Sbjct: 150 TGQYIFLLGAYRSFYILNWVYRYFTEPHFVHWIT 183

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BLAST of MS017575 vs. ExPASy Swiss-Prot
Match: Q8VWI1 (ER lumen protein-retaining receptor B OS=Arabidopsis thaliana OX=3702 GN=ERD2B PE=1 SV=1)

HSP 1 Score: 263.8 bits (673), Expect = 1.2e-69
Identity = 124/154 (80.52%), Postives = 142/154 (92.21%), Query Frame = 0


Query: 1   AGVSLKTQELYAIVFTTRYLDIFTDFISLYNTVMKLIFLGSSYSIIWYIRRHKIVRRSYD 60
           AGVSLKTQELYAIVF TRYLDIFT F+SLYNT MKL+FLGSS+SI+WY++ HK V R+YD
Sbjct: 30  AGVSLKTQELYAIVFATRYLDIFTSFVSLYNTSMKLVFLGSSFSIVWYMKYHKAVHRTYD 89

Query: 61  KNQDTFRHLFLIIPCFVLALLINEKFTFKEVMWTFSLYLEAVAILPQLVLLQRTKNIDNL 120
           + QDTFRH FL++PCF+LALLI+EKFTF EV+WT SLYLEAVAILPQLVLLQRT+NIDNL
Sbjct: 90  REQDTFRHWFLVLPCFLLALLIHEKFTFLEVLWTSSLYLEAVAILPQLVLLQRTRNIDNL 149

Query: 121 TGQYVFLLGAYRALYIVNWVYRYFTEPHFVHWIS 155
           TGQY+FLLG YR LYI+NW+YRYFTEPHFVHWI+
Sbjct: 150 TGQYIFLLGGYRGLYILNWIYRYFTEPHFVHWIT 183

[Close]

BLAST of MS017575 vs. ExPASy Swiss-Prot
Match: P35402 (ER lumen protein-retaining receptor A OS=Arabidopsis thaliana OX=3702 GN=ERD2A PE=2 SV=1)

HSP 1 Score: 237.7 bits (605), Expect = 9.0e-62
Identity = 107/154 (69.48%), Postives = 135/154 (87.66%), Query Frame = 0


Query: 1   AGVSLKTQELYAIVFTTRYLDIFTDFISLYNTVMKLIFLGSSYSIIWYIRRHKIVRRSYD 60
           AG+SLKTQELYA+VF TRYLD+FTD++SLYN++MK++F+ SS +I+W +RRH +VRRSYD
Sbjct: 30  AGISLKTQELYALVFLTRYLDLFTDYVSLYNSIMKIVFIASSLAIVWCMRRHPLVRRSYD 89

Query: 61  KNQDTFRHLFLIIPCFVLALLINEKFTFKEVMWTFSLYLEAVAILPQLVLLQRTKNIDNL 120
           K+ DTFRH ++++ CFVL L++NEKFT +EV W FS+YLEAVAILPQLVLLQR+ N+DNL
Sbjct: 90  KDLDTFRHQYVVLACFVLGLILNEKFTVQEVFWAFSIYLEAVAILPQLVLLQRSGNVDNL 149

Query: 121 TGQYVFLLGAYRALYIVNWVYRYFTEPHFVHWIS 155
           TGQYV  LGAYR LYI+NW+YRYFTE HF  WI+
Sbjct: 150 TGQYVVFLGAYRGLYIINWIYRYFTEDHFTRWIA 183

[Close]

BLAST of MS017575 vs. ExPASy Swiss-Prot
Match: Q611C8 (ER lumen protein-retaining receptor OS=Caenorhabditis briggsae OX=6238 GN=erd-2 PE=3 SV=1)

HSP 1 Score: 167.9 bits (424), Expect = 8.8e-41
Identity = 85/148 (57.43%), Postives = 110/148 (74.32%), Query Frame = 0


Query: 2   GVSLKTQELYAIVFTTRYLDIFTDFISLYNTVMKLIFLGSSYSIIWYIRRHKIVRRSYDK 61
           G+S ++Q L+A+ F TRYLD+FT F SLYNTVMK++FL  S   + Y+   K  + +YD+
Sbjct: 31  GISGRSQILFAVTFFTRYLDLFTSFYSLYNTVMKVLFLAGSIGTV-YLMWVKF-KATYDR 90

Query: 62  NQDTFRHLFLIIPCFVLALLINEKFTFKEVMWTFSLYLEAVAILPQLVLLQRTKNIDNLT 121
           N DTFR  FL+IP  +LAL+IN +F F EVMWTFS+YLEAVAI+PQL +L RT N + +T
Sbjct: 91  NNDTFRIEFLVIPSIILALIINHEFMFMEVMWTFSIYLEAVAIMPQLFMLSRTGNAETIT 150

Query: 122 GQYVFLLGAYRALYIVNWVYRYFTEPHF 150
             Y+F LG+YR LYI NWVYRY+TE  F
Sbjct: 151 AHYLFALGSYRFLYIFNWVYRYYTESFF 176

[Close]

BLAST of MS017575 vs. ExPASy Swiss-Prot
Match: P48583 (ER lumen protein-retaining receptor erd-2.1 OS=Caenorhabditis elegans OX=6239 GN=erd-2.1 PE=3 SV=2)

HSP 1 Score: 167.2 bits (422), Expect = 1.5e-40
Identity = 83/148 (56.08%), Postives = 112/148 (75.68%), Query Frame = 0


Query: 2   GVSLKTQELYAIVFTTRYLDIFTDFISLYNTVMKLIFLGSSYSIIWYIRRHKIVRRSYDK 61
           G+S ++Q L+A+VF TRYLD+FT+F S YNT MK+ +L +S+  + Y+   K  + +YD+
Sbjct: 31  GISGRSQLLFALVFVTRYLDLFTNFFSFYNTAMKIFYLVASFGTV-YLMWAKF-KATYDR 90

Query: 62  NQDTFRHLFLIIPCFVLALLINEKFTFKEVMWTFSLYLEAVAILPQLVLLQRTKNIDNLT 121
           N D+FR  FL+IP  +LALLIN +F F EVMWTFS+YLEAVAI+PQL +L RT N + +T
Sbjct: 91  NNDSFRIEFLVIPSMILALLINHEFIFMEVMWTFSIYLEAVAIMPQLFMLSRTGNAETIT 150

Query: 122 GQYVFLLGAYRALYIVNWVYRYFTEPHF 150
             Y+F LG+YR LYI+NWVYRY+TE  F
Sbjct: 151 AHYLFALGSYRFLYILNWVYRYYTESFF 176

[Close]

BLAST of MS017575 vs. ExPASy TrEMBL
Match: A0A6J1DZK0 (ER lumen protein-retaining receptor OS=Momordica charantia OX=3673 GN=LOC111026065 PE=3 SV=1)

HSP 1 Score: 306.2 bits (783), Expect = 7.6e-80
Identity = 153/154 (99.35%), Postives = 154/154 (100.00%), Query Frame = 0


Query: 1   AGVSLKTQELYAIVFTTRYLDIFTDFISLYNTVMKLIFLGSSYSIIWYIRRHKIVRRSYD 60
           AGVSLKTQELYAIVFTTRYLDIFTDFISLYNTVMKLIFLGSSYSIIWYIRRHKIVRRSYD
Sbjct: 30  AGVSLKTQELYAIVFTTRYLDIFTDFISLYNTVMKLIFLGSSYSIIWYIRRHKIVRRSYD 89

Query: 61  KNQDTFRHLFLIIPCFVLALLINEKFTFKEVMWTFSLYLEAVAILPQLVLLQRTKNIDNL 120
           KNQDTFRHLFLIIPCFVLALLINEKFTFKEVMWTFSLYLEAVAILPQLVLLQRTKNIDNL
Sbjct: 90  KNQDTFRHLFLIIPCFVLALLINEKFTFKEVMWTFSLYLEAVAILPQLVLLQRTKNIDNL 149

Query: 121 TGQYVFLLGAYRALYIVNWVYRYFTEPHFVHWIS 155
           TGQYVFLLGAYRALYIVNWVYRYFTEPHFVHWI+
Sbjct: 150 TGQYVFLLGAYRALYIVNWVYRYFTEPHFVHWIT 183

[Close]

BLAST of MS017575 vs. ExPASy TrEMBL
Match: A0A0A0L8S9 (ER lumen protein-retaining receptor OS=Cucumis sativus OX=3659 GN=Csa_3G629230 PE=3 SV=1)

HSP 1 Score: 302.4 bits (773), Expect = 1.1e-78
Identity = 149/154 (96.75%), Postives = 153/154 (99.35%), Query Frame = 0


Query: 1   AGVSLKTQELYAIVFTTRYLDIFTDFISLYNTVMKLIFLGSSYSIIWYIRRHKIVRRSYD 60
           AGVSLKTQELYAIVFTTRYLDIFTDFISLYNTVMKLIFLGSSYSI+WYIRRHKIVRRSYD
Sbjct: 30  AGVSLKTQELYAIVFTTRYLDIFTDFISLYNTVMKLIFLGSSYSIVWYIRRHKIVRRSYD 89

Query: 61  KNQDTFRHLFLIIPCFVLALLINEKFTFKEVMWTFSLYLEAVAILPQLVLLQRTKNIDNL 120
           KNQDTFRHLFLI+PCFVLALLINEK TFKEVMWTFSLYLEAVAILPQLVLLQRTKNIDNL
Sbjct: 90  KNQDTFRHLFLILPCFVLALLINEKLTFKEVMWTFSLYLEAVAILPQLVLLQRTKNIDNL 149

Query: 121 TGQYVFLLGAYRALYIVNWVYRYFTEPHFVHWIS 155
           TGQYVFLLGAYRALYIVNW+YRYFTEPHFVHWI+
Sbjct: 150 TGQYVFLLGAYRALYIVNWIYRYFTEPHFVHWIT 183

[Close]

BLAST of MS017575 vs. ExPASy TrEMBL
Match: A0A1S3CMY2 (ER lumen protein-retaining receptor OS=Cucumis melo OX=3656 GN=LOC103502779 PE=3 SV=1)

HSP 1 Score: 302.0 bits (772), Expect = 1.4e-78
Identity = 148/154 (96.10%), Postives = 153/154 (99.35%), Query Frame = 0


Query: 1   AGVSLKTQELYAIVFTTRYLDIFTDFISLYNTVMKLIFLGSSYSIIWYIRRHKIVRRSYD 60
           AG+SLKTQELYAIVFTTRYLDIFTDFISLYNTVMKLIFLGSSYSI+WYIRRHKIVRRSYD
Sbjct: 30  AGISLKTQELYAIVFTTRYLDIFTDFISLYNTVMKLIFLGSSYSIVWYIRRHKIVRRSYD 89

Query: 61  KNQDTFRHLFLIIPCFVLALLINEKFTFKEVMWTFSLYLEAVAILPQLVLLQRTKNIDNL 120
           KNQDTFRHLFLI+PCFVLALLINEK TFKEVMWTFSLYLEAVAILPQLVLLQRTKNIDNL
Sbjct: 90  KNQDTFRHLFLILPCFVLALLINEKLTFKEVMWTFSLYLEAVAILPQLVLLQRTKNIDNL 149

Query: 121 TGQYVFLLGAYRALYIVNWVYRYFTEPHFVHWIS 155
           TGQYVFLLGAYRALYIVNW+YRYFTEPHFVHWI+
Sbjct: 150 TGQYVFLLGAYRALYIVNWIYRYFTEPHFVHWIT 183

[Close]

BLAST of MS017575 vs. ExPASy TrEMBL
Match: A0A6J1ETS0 (ER lumen protein-retaining receptor OS=Cucurbita moschata OX=3662 GN=LOC111437475 PE=3 SV=1)

HSP 1 Score: 298.9 bits (764), Expect = 1.2e-77
Identity = 147/154 (95.45%), Postives = 152/154 (98.70%), Query Frame = 0


Query: 1   AGVSLKTQELYAIVFTTRYLDIFTDFISLYNTVMKLIFLGSSYSIIWYIRRHKIVRRSYD 60
           AGVSLKTQELYAIVFTTRYLDIFTDFISLYNTVMKLIFLGSSYSI+WYIRRHKIVRRSYD
Sbjct: 30  AGVSLKTQELYAIVFTTRYLDIFTDFISLYNTVMKLIFLGSSYSIVWYIRRHKIVRRSYD 89

Query: 61  KNQDTFRHLFLIIPCFVLALLINEKFTFKEVMWTFSLYLEAVAILPQLVLLQRTKNIDNL 120
           KNQDTFRH+FLI+PC VLALLINEK TFKEVMWTFSLYLEAVAILPQLVLLQRTKNIDNL
Sbjct: 90  KNQDTFRHIFLILPCVVLALLINEKLTFKEVMWTFSLYLEAVAILPQLVLLQRTKNIDNL 149

Query: 121 TGQYVFLLGAYRALYIVNWVYRYFTEPHFVHWIS 155
           TGQYVFLLGAYRALYI+NWVYRYFTEPHFVHWI+
Sbjct: 150 TGQYVFLLGAYRALYIINWVYRYFTEPHFVHWIT 183

[Close]

BLAST of MS017575 vs. ExPASy TrEMBL
Match: A0A6J1K9I6 (ER lumen protein-retaining receptor OS=Cucurbita maxima OX=3661 GN=LOC111491327 PE=3 SV=1)

HSP 1 Score: 295.4 bits (755), Expect = 1.3e-76
Identity = 146/154 (94.81%), Postives = 151/154 (98.05%), Query Frame = 0


Query: 1   AGVSLKTQELYAIVFTTRYLDIFTDFISLYNTVMKLIFLGSSYSIIWYIRRHKIVRRSYD 60
           AGVSLKTQELYAIVFTTRYLDIFTDFISLYNTVMKLIFLGSSYSI+WYIRRHKIVRRSYD
Sbjct: 30  AGVSLKTQELYAIVFTTRYLDIFTDFISLYNTVMKLIFLGSSYSIVWYIRRHKIVRRSYD 89

Query: 61  KNQDTFRHLFLIIPCFVLALLINEKFTFKEVMWTFSLYLEAVAILPQLVLLQRTKNIDNL 120
           K+QDTFRH+FLI+PC VLALLINEK TFKEVMWTFSLYLEAVAILPQLVLLQRTKNIDNL
Sbjct: 90  KSQDTFRHVFLILPCVVLALLINEKLTFKEVMWTFSLYLEAVAILPQLVLLQRTKNIDNL 149

Query: 121 TGQYVFLLGAYRALYIVNWVYRYFTEPHFVHWIS 155
           TGQYVFLLGAYR LYIVNWVYRYFTEPHFVHWI+
Sbjct: 150 TGQYVFLLGAYRGLYIVNWVYRYFTEPHFVHWIT 183

[Close]

BLAST of MS017575 vs. TAIR 10
Match: AT3G25040.1 (endoplasmic reticulum retention defective 2B )

HSP 1 Score: 263.8 bits (673), Expect = 8.4e-71
Identity = 124/154 (80.52%), Postives = 142/154 (92.21%), Query Frame = 0


Query: 1   AGVSLKTQELYAIVFTTRYLDIFTDFISLYNTVMKLIFLGSSYSIIWYIRRHKIVRRSYD 60
           AGVSLKTQELYAIVF TRYLDIFT F+SLYNT MKL+FLGSS+SI+WY++ HK V R+YD
Sbjct: 30  AGVSLKTQELYAIVFATRYLDIFTSFVSLYNTSMKLVFLGSSFSIVWYMKYHKAVHRTYD 89

Query: 61  KNQDTFRHLFLIIPCFVLALLINEKFTFKEVMWTFSLYLEAVAILPQLVLLQRTKNIDNL 120
           + QDTFRH FL++PCF+LALLI+EKFTF EV+WT SLYLEAVAILPQLVLLQRT+NIDNL
Sbjct: 90  REQDTFRHWFLVLPCFLLALLIHEKFTFLEVLWTSSLYLEAVAILPQLVLLQRTRNIDNL 149

Query: 121 TGQYVFLLGAYRALYIVNWVYRYFTEPHFVHWIS 155
           TGQY+FLLG YR LYI+NW+YRYFTEPHFVHWI+
Sbjct: 150 TGQYIFLLGGYRGLYILNWIYRYFTEPHFVHWIT 183

[Close]

BLAST of MS017575 vs. TAIR 10
Match: AT1G29330.1 (ER lumen protein retaining receptor family protein )

HSP 1 Score: 237.7 bits (605), Expect = 6.4e-63
Identity = 107/154 (69.48%), Postives = 135/154 (87.66%), Query Frame = 0


Query: 1   AGVSLKTQELYAIVFTTRYLDIFTDFISLYNTVMKLIFLGSSYSIIWYIRRHKIVRRSYD 60
           AG+SLKTQELYA+VF TRYLD+FTD++SLYN++MK++F+ SS +I+W +RRH +VRRSYD
Sbjct: 30  AGISLKTQELYALVFLTRYLDLFTDYVSLYNSIMKIVFIASSLAIVWCMRRHPLVRRSYD 89

Query: 61  KNQDTFRHLFLIIPCFVLALLINEKFTFKEVMWTFSLYLEAVAILPQLVLLQRTKNIDNL 120
           K+ DTFRH ++++ CFVL L++NEKFT +EV W FS+YLEAVAILPQLVLLQR+ N+DNL
Sbjct: 90  KDLDTFRHQYVVLACFVLGLILNEKFTVQEVFWAFSIYLEAVAILPQLVLLQRSGNVDNL 149

Query: 121 TGQYVFLLGAYRALYIVNWVYRYFTEPHFVHWIS 155
           TGQYV  LGAYR LYI+NW+YRYFTE HF  WI+
Sbjct: 150 TGQYVVFLGAYRGLYIINWIYRYFTEDHFTRWIA 183

[Close]

BLAST of MS017575 vs. TAIR 10
Match: AT2G21190.1 (ER lumen protein retaining receptor family protein )

HSP 1 Score: 84.0 bits (206), Expect = 1.2e-16
Identity = 52/145 (35.86%), Postives = 85/145 (58.62%), Query Frame = 0


Query: 1   AGVSLKTQELYAIVFTTRYLDIFTDFISLY--NTVMKLIFLGSSYSIIWYIRRHKIVRRS 60
           AG+SLK+QEL AI    R   ++  F+  Y  +T++ L  LG++  +I+ IR +  ++ +
Sbjct: 71  AGLSLKSQELTAIFLAVR---LYCSFVMEYDIHTILDLATLGTTLWVIYMIRFN--LKTT 130

Query: 61  YDKNQDTFRHLFLIIPCFVLALLINEKFT---FKEVMWTFSLYLEAVAILPQLVLLQRTK 120
           Y + +D F   +++ PC VLA+ I+   +      + W F +YLEAV++LPQL ++Q TK
Sbjct: 131 YMEEKDNFALYYVLAPCVVLAVWIHPSTSHNILNRISWGFCVYLEAVSVLPQLRVMQNTK 190

Query: 121 NIDNLTGQYVFLLGAYRALYIVNWV 141
            ++  T  YVF LG  R     +WV
Sbjct: 191 IVEPFTAHYVFALGVARFFSCAHWV 210

[Close]

BLAST of MS017575 vs. TAIR 10
Match: AT4G38790.1 (ER lumen protein retaining receptor family protein )

HSP 1 Score: 82.0 bits (201), Expect = 4.5e-16
Identity = 53/144 (36.81%), Postives = 83/144 (57.64%), Query Frame = 0


Query: 1   AGVSLKTQELYAIVFTTR-YLDIFTDFISLYNTVMKLIFLGSSYSIIWYIRRHKIVRRSY 60
           AG+SLK+QEL AI    R Y  I  ++    +T++ L  LG++  +I+ IR    +R SY
Sbjct: 75  AGLSLKSQELTAIFLAVRLYCSIVMEYD--IHTILDLATLGTTLWVIFMIRFK--LRASY 134

Query: 61  DKNQDTFRHLFLIIPCFVLALLINEKFT---FKEVMWTFSLYLEAVAILPQLVLLQRTKN 120
            +++D F   +++ PC  LA+ I+   +      + W   +YLEAV++LPQL ++Q TK 
Sbjct: 135 MEDKDNFPLYYVLAPCVALAVFIHPSTSHNIINRISWALCVYLEAVSVLPQLRVMQNTKI 194

Query: 121 IDNLTGQYVFLLGAYRALYIVNWV 141
           ++  T  YVF LG  R L   +WV
Sbjct: 195 VEPFTAHYVFALGVARFLSCAHWV 214

[Close]

BLAST of MS017575 vs. TAIR 10
Match: AT1G75760.1 (ER lumen protein retaining receptor family protein )

HSP 1 Score: 80.9 bits (198), Expect = 1.0e-15
Identity = 51/145 (35.17%), Postives = 85/145 (58.62%), Query Frame = 0


Query: 1   AGVSLKTQELYAIVFTTRYLDIFTDFISLY--NTVMKLIFLGSSYSIIWYIRRHKIVRRS 60
           AG+SLK+QEL A+    R   ++  F+  +  +T++    L ++  +I+ IR    ++ S
Sbjct: 74  AGLSLKSQELTALFLAVR---LYCSFVMEFDIHTLLDSATLVTTLFVIYMIRFK--LKAS 133

Query: 61  YDKNQDTFRHLFLIIPCFVLALLIN---EKFTFKEVMWTFSLYLEAVAILPQLVLLQRTK 120
           Y  ++D F   +++IPC VL++LI+         ++ W F +YLEAV++LPQL ++Q TK
Sbjct: 134 YMDDKDNFAIYYVVIPCVVLSVLIHPSTHHHIINKISWAFCVYLEAVSVLPQLRVMQNTK 193

Query: 121 NIDNLTGQYVFLLGAYRALYIVNWV 141
            ++  T  YVF LG  R L   +WV
Sbjct: 194 IVEPFTAHYVFALGIARFLSCAHWV 213

The following BLAST results are available for this feature:

BLAST of MS017575 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022159725.1	1.6e-79	99.35	ER lumen protein-retaining receptor [Momordica charantia]	[more]
XP_004144385.1	2.3e-78	96.75	ER lumen protein-retaining receptor [Cucumis sativus] >KGN58365.1 hypothetical p...	[more]
XP_008465077.1	3.0e-78	96.10	PREDICTED: ER lumen protein-retaining receptor [Cucumis melo]	[more]
XP_038886982.1	8.7e-78	95.45	ER lumen protein-retaining receptor [Benincasa hispida]	[more]
XP_022931239.1	2.5e-77	95.45	ER lumen protein-retaining receptor [Cucurbita moschata]	[more]

BLAST of MS017575 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9ZTN2	7.1e-75	86.36	ER lumen protein-retaining receptor OS=Petunia hybrida OX=4102 GN=ERD2 PE=2 SV=1	[more]
Q8VWI1	1.2e-69	80.52	ER lumen protein-retaining receptor B OS=Arabidopsis thaliana OX=3702 GN=ERD2B P...	[more]
P35402	9.0e-62	69.48	ER lumen protein-retaining receptor A OS=Arabidopsis thaliana OX=3702 GN=ERD2A P...	[more]
Q611C8	8.8e-41	57.43	ER lumen protein-retaining receptor OS=Caenorhabditis briggsae OX=6238 GN=erd-2 ...	[more]
P48583	1.5e-40	56.08	ER lumen protein-retaining receptor erd-2.1 OS=Caenorhabditis elegans OX=6239 GN...	[more]

BLAST of MS017575 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1DZK0	7.6e-80	99.35	ER lumen protein-retaining receptor OS=Momordica charantia OX=3673 GN=LOC1110260...	[more]
A0A0A0L8S9	1.1e-78	96.75	ER lumen protein-retaining receptor OS=Cucumis sativus OX=3659 GN=Csa_3G629230 P...	[more]
A0A1S3CMY2	1.4e-78	96.10	ER lumen protein-retaining receptor OS=Cucumis melo OX=3656 GN=LOC103502779 PE=3...	[more]
A0A6J1ETS0	1.2e-77	95.45	ER lumen protein-retaining receptor OS=Cucurbita moschata OX=3662 GN=LOC11143747...	[more]
A0A6J1K9I6	1.3e-76	94.81	ER lumen protein-retaining receptor OS=Cucurbita maxima OX=3661 GN=LOC111491327 ...	[more]

BLAST of MS017575 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G25040.1	8.4e-71	80.52	endoplasmic reticulum retention defective 2B	[more]
AT1G29330.1	6.4e-63	69.48	ER lumen protein retaining receptor family protein	[more]
AT2G21190.1	1.2e-16	35.86	ER lumen protein retaining receptor family protein	[more]
AT4G38790.1	4.5e-16	36.81	ER lumen protein retaining receptor family protein	[more]
AT1G75760.1	1.0e-15	35.17	ER lumen protein retaining receptor family protein	[more]

InterPro

Analysis Name: InterPro Annotations of Bitter gourd (TR) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR000133	ER lumen protein retaining receptor	PRINTS	PR00660	ERLUMENR	coord: 129..147 score: 66.17 coord: 23..39 score: 61.76 coord: 93..113 score: 72.11 coord: 2..22 score: 63.61 coord: 115..129 score: 38.57
IPR000133	ER lumen protein retaining receptor	PFAM	PF00810	ER_lumen_recept	coord: 1..142 e-value: 4.2E-53 score: 180.1
IPR000133	ER lumen protein retaining receptor	PANTHER	PTHR10585	ER LUMEN PROTEIN RETAINING RECEPTOR	coord: 1..153
IPR000133	ER lumen protein retaining receptor	PROSITE	PS00952	ER_LUMEN_RECEPTOR_2	coord: 99..108
IPR000133	ER lumen protein retaining receptor	PROSITE	PS00951	ER_LUMEN_RECEPTOR_1	coord: 2..19
None	No IPR available	PANTHER	PTHR10585:SF80	ER LUMEN PROTEIN-RETAINING RECEPTOR	coord: 1..153

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
MS017575.1	MS017575.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006621	protein retention in ER lumen
cellular_component	GO:0016021	integral component of membrane
molecular_function	GO:0046923	ER retention sequence binding